F350179

General Info

Members Datasets Scaffolds Average Seq Length
237 180 474 293

Family's Representative Sequence

Representative Sequence 3300035724|Ga0373933_0090109|Ga0373933_0090109_827_1792
Length 321
Sequence MSALDAAVSARESLREPSRLIGLIGSGISGSLSPALHEREARAQGLCCLYRIIDLDELGLTAADTPGLLTAARRLGFDGLNITHPSKQVILGYLDELSPDAAALQAVNTVVFRDGRAVGHNTDWSGFAESFARGLTGVAADRVVLLGAGGAGAAVGHAVLTFGTRLLTIVDLDGDRALSLAAGLDGRFGAGRARAAGPAGLASALARADGLIHATPTGMAAHPGLPLPASLLHPRLWVADVVYLPIDTELVRAARALGCRTLDGGGMAVFQAVEAFRLFTGRSADAERMLRHFRALTRPAGLSDHAGPXXXXAGPIGVSHD

Samples

Sample ID Description Type Environment
1 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
6 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
7 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
8 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
9 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
10 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
11 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
12 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
13 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
14 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
15 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
16 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
17 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
18 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
19 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
20 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
21 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
22 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
23 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
24 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
25 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
26 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
27 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
28 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
29 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
30 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
31 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
32 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
33 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
34 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
35 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
36 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
37 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
38 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
39 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
40 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
41 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
42 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
43 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
44 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
45 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
46 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
47 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
48 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
49 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
50 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
51 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
52 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
53 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
54 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
55 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
56 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
57 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
58 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
59 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
60 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
61 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
62 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
63 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
64 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
65 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
66 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
67 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
68 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
69 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
70 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
71 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
72 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
73 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
74 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
75 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
76 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
77 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
78 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
79 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
80 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
81 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
82 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
83 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
84 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
85 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
86 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
87 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
88 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
89 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
90 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
91 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
92 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
93 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
94 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
95 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
96 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
97 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
98 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
99 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
100 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
101 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
102 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
103 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
104 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
105 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
106 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
107 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
108 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
109 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
110 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
111 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
112 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
113 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
114 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
115 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
116 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
119 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
120 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
121 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
122 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
123 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
124 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
125 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
126 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
127 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
128 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
129 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
130 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
131 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
132 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
133 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
134 2622736605 Geodermatophilus ruber DSM 45317 Isolate Rhizosphere
135 2643221548 Streptomyces sp. Root55 Isolate Unclassified
136 2643221647 Streptomyces sp. Root369 Isolate Unclassified
137 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
138 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
139 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
140 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
141 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
142 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
143 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
144 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
145 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
146 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
147 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
148 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
149 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
150 2862574272 Streptomyces sp. AcE210 Isolate Nodule
151 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
152 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
153 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
154 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
155 2941499720 Ensifer sp. 4252 Isolate Rhizosphere
156 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
157 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
158 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
159 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
160 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
161 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
162 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
163 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
164 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
165 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
166 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
167 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
168 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
169 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
170 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
171 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
172 643348564 Methylobacterium nodulans ORS 2060 Isolate Nodule
173 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
174 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
175 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
176 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
177 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
178 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
179 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
180 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 78.48
Metatranscriptomes 0
Isolates 21.52

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.8
Nodule 0.84
Rhizoplane 0.42
Rhizosphere 79.32
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373933_0090109 3300035724 Bacteria 1891
2 JGI25406J46586_10001081 3300003203 Bacteria 12786
3 rootL2_10137787 3300003322 Bacteria 12087
4 rootH1_10003349 3300003323 Bacteria 7906
5 Ga0070679_100033554 3300005530 Bacteria 5083
6 Ga0068856_100063016 3300005614 Bacteria 3663
7 Ga0081539_10000032 3300005985 Bacteria 311452
8 Ga0075370_10011488 3300006353 Bacteria 4655
9 Ga0182008_10168699 3300014497 Bacteria 1104
10 Ga0183367_1001 3300015688 Bacteria 1225545
11 Ga0207647_10020685 3300025904 Bacteria 4408
12 Ga0207669_10322052 3300025937 Bacteria 1184
13 Ga0207678_10343647 3300026067 Bacteria 1286
14 Ga0207702_10161487 3300026078 Bacteria 2046
15 Ga0307515_10001513 3300028794 Bacteria 52028
16 Ga0307515_10014250 3300028794 Bacteria 14769
17 Ga0307515_10075295 3300028794 Bacteria 4499
18 Ga0307511_10002619 3300030521 Bacteria 18768
19 Ga0307511_10081488 3300030521 Bacteria 2271
20 Ga0307512_10005075 3300030522 Bacteria 13986
21 Ga0307512_10010207 3300030522 Bacteria 8972
22 Ga0307513_10005869 3300031456 Bacteria 16132
23 Ga0307513_10068019 3300031456 Bacteria 3733
24 Ga0307508_10012163 3300031616 Bacteria 7871
25 Ga0307508_10067754 3300031616 Bacteria 3139
26 Ga0307516_10021811 3300031730 Bacteria 6583
27 Ga0307410_10018768 3300031852 Bacteria 4188
28 Ga0307406_10201012 3300031901 Bacteria 1467
29 Ga0307412_10412425 3300031911 Bacteria 1103
30 Ga0307409_100148367 3300031995 Bacteria 2032
31 Ga0307416_100626867 3300032002 Bacteria 1158
32 Ga0307415_100041613 3300032126 Bacteria 3052
33 Ga0307507_10001937 3300033179 Bacteria 45000
34 Ga0307507_10014438 3300033179 Bacteria 9417
35 Ga0307507_10108441 3300033179 Bacteria 2283
36 Ga0307510_10129930 3300033180 Bacteria 2195
37 Ga0307510_10183720 3300033180 Bacteria 1649
38 Ga0373937_0036598 3300036401 Bacteria 4473
39 Ga0395898_0003371 3300037466 Bacteria 17897
40 Ga0395898_0003470 3300037466 Bacteria 17611
41 Ga0395898_0009187 3300037466 Bacteria 10405
42 Ga0395905_0161359 3300037471 Bacteria 2107
43 Ga0395901_0314806 3300038443 Bacteria 1620
44 Ga0439436_0008664 3300041404 Bacteria 3126
45 Ga0439439_0003672 3300041406 Bacteria 3402
46 Ga0439433_0005962 3300041999 Bacteria 2619
47 Ga0439433_0017872 3300041999 Bacteria 1576
48 Ga0439442_058247 3300042002 Bacteria 817
49 Ga0439449_0001475 3300042007 Bacteria 9214
50 Ga0439449_0017738 3300042007 Bacteria 2673
51 Ga0439457_002574 3300042014 Bacteria 5136
52 Ga0439462_0050705 3300042015 Bacteria 1115
53 Ga0450899_001735 3300042135 Bacteria 2417
54 Ga0450903_000206 3300042138 Bacteria 13047
55 Ga0450906_002606 3300042145 Bacteria 3933
56 Ga0439458_0001366 3300042157 Bacteria 6154
57 Ga0450908_012271 3300042184 Bacteria 1557
58 Ga0466969_0008955 3300044656 Bacteria 5307
59 Ga0466972_0003594 3300044658 Bacteria 7712
60 Ga0466966_0002447 3300044684 Bacteria 12138
61 Ga0466964_0082855 3300044706 Bacteria 1380
62 Ga0466971_0065261 3300044719 Bacteria 1649
63 Ga0466968_0027667 3300044735 Bacteria 2334
64 Ga0466970_0107664 3300044765 Bacteria 1521
65 Ga0466960_0095195 3300044901 Bacteria 1525
66 Ga0466959_0020255 3300045049 Bacteria 4898
67 Ga0466959_0030094 3300045049 Bacteria 4021
68 Ga0466959_0042024 3300045049 Bacteria 3373
69 Ga0466967_0007929 3300045976 Bacteria 7724
70 Ga0466967_0010501 3300045976 Bacteria 6952
71 Ga0466967_0473095 3300045976 Bacteria 1227
72 Ga0466967_0607577 3300045976 Bacteria 1080
73 Ga0495617_006903 3300046452 Bacteria 3964
74 Ga0495627_010164 3300046453 Bacteria 3434
75 Ga0495592_0006424 3300046454 Bacteria 8750
76 Ga0495592_0063908 3300046454 Bacteria 2698
77 Ga0495603_0005980 3300046455 Bacteria 7274
78 Ga0495603_0009906 3300046455 Bacteria 5769
79 Ga0495638_0043821 3300046460 Bacteria 2821
80 Ga0495651_0002735 3300046462 Bacteria 13671
81 Ga0495651_0014887 3300046462 Bacteria 6013
82 Ga0495651_0161727 3300046462 Bacteria 1603
83 Ga0495653_0036942 3300046463 Bacteria 3843
84 Ga0495580_0137464 3300046472 Bacteria 1694
85 Ga0495582_0043711 3300046473 Bacteria 2467
86 Ga0495639_0186375 3300046475 Bacteria 1012
87 Ga0495662_0001839 3300046476 Bacteria 10633
88 Ga0495664_0000843 3300046477 Bacteria 15738
89 Ga0495584_0091527 3300046491 Bacteria 1534
90 Ga0495585_0109638 3300046492 Bacteria 1469
91 Ga0495594_0032400 3300046499 Bacteria 2837
92 Ga0495608_0013773 3300046511 Bacteria 5611
93 Ga0495608_0085895 3300046511 Bacteria 2039
94 Ga0495616_0019697 3300046513 Bacteria 3679
95 Ga0495618_0016960 3300046514 Bacteria 4463
96 Ga0495620_0006811 3300046515 Bacteria 6249
97 Ga0495628_0018227 3300046516 Bacteria 5820
98 Ga0495628_0025985 3300046516 Bacteria 4781
99 Ga0495628_0095808 3300046516 Bacteria 2293
100 Ga0495630_0148983 3300046517 Bacteria 1780
101 Ga0495632_0093283 3300046519 Bacteria 1425
102 Ga0495643_0006323 3300046522 Bacteria 7829
103 Ga0495648_0042228 3300046524 Bacteria 2871
104 Ga0495642_0047992 3300046528 Bacteria 1750
105 Ga0495652_0027431 3300046529 Bacteria 5018
106 Ga0495652_0083031 3300046529 Bacteria 2638
107 Ga0495640_0085598 3300046533 Bacteria 2089
108 Ga0495587_0126452 3300046536 Bacteria 1462
109 Ga0495609_0022028 3300046538 Bacteria 2937
110 Ga0495645_0027127 3300046543 Bacteria 4160
111 Ga0495633_0049483 3300046558 Bacteria 1983
112 Ga0495667_0000622 3300046559 Bacteria 22597
113 Ga0495634_0023082 3300046642 Bacteria 4378
114 Ga0495611_0008147 3300046648 Bacteria 4445
115 Ga0495625_0002674 3300046660 Bacteria 18955
116 Ga0495625_0014621 3300046660 Bacteria 6254
117 Ga0495635_0000520 3300046663 Bacteria 24388
118 Ga0495635_0003023 3300046663 Bacteria 11555
119 Ga0495657_0003443 3300046675 Bacteria 12912
120 Ga0495657_0010577 3300046675 Bacteria 6936
121 Ga0495657_0020849 3300046675 Bacteria 4710
122 Ga0495623_0046875 3300046679 Bacteria 2743
123 Ga0495646_0018627 3300046680 Bacteria 4396
124 Ga0495646_0050436 3300046680 Bacteria 2523
125 Ga0495646_0156334 3300046680 Bacteria 1265
126 Ga0495658_0106680 3300046683 Bacteria 1679
127 Ga0495613_0001531 3300046689 Bacteria 17600
128 Ga0495613_0031417 3300046689 Bacteria 3944
129 Ga0495613_0102579 3300046689 Bacteria 2065
130 Ga0495624_0018888 3300046690 Bacteria 4606
131 Ga0495649_0048676 3300046694 Bacteria 2304
132 Ga0495589_0002374 3300046794 Bacteria 10574
133 Ga0495589_0028631 3300046794 Bacteria 2810
134 Ga0495600_0029678 3300046809 Bacteria 3541
135 Ga0495600_0041123 3300046809 Bacteria 3012
136 Ga0495660_0033678 3300046810 Bacteria 2870
137 Ga0495660_0080151 3300046810 Bacteria 1713
138 Ga0495581_0012229 3300047315 Bacteria 4970
139 Ga0495581_0101975 3300047315 Bacteria 1667
140 Ga0495604_0006222 3300047317 Bacteria 9473
141 Ga0495604_0041141 3300047317 Bacteria 3625
142 Ga0495604_0141192 3300047317 Bacteria 1720
143 Ga0495674_0035673 3300047319 Bacteria 4484
144 Ga0495676_0003597 3300047321 Bacteria 14067
145 Ga0495676_0080809 3300047321 Bacteria 2466
146 Ga0495676_0085599 3300047321 Bacteria 2374
147 Ga0495676_0100248 3300047321 Bacteria 2144
148 Ga0495680_0005837 3300047322 Bacteria 11521
149 Ga0495680_0084199 3300047322 Bacteria 2396
150 Ga0495687_014931 3300047443 Bacteria 3969
151 Ga0495687_015564 3300047443 Bacteria 3861
152 Ga0495687_015604 3300047443 Bacteria 3855
153 Ga0495687_025423 3300047443 Bacteria 2800
154 Ga0495675_0144626 3300047444 Bacteria 1472
155 Ga0495677_0023437 3300047445 Bacteria 2241
156 Ga0495685_007712 3300047447 Bacteria 3560
157 Ga0495685_035476 3300047447 Bacteria 1714
158 Ga0495685_036611 3300047447 Bacteria 1684
159 Ga0495681_0004310 3300047470 Bacteria 9736
160 Ga0495684_0058932 3300047471 Bacteria 2924
161 Ga0495684_0361044 3300047471 Bacteria 1029
162 Ga0495686_0036969 3300047472 Bacteria 3131
163 Ga0495686_0040202 3300047472 Bacteria 2984
164 Ga0495593_0003672 3300047673 Bacteria 9162
165 Ga0495593_0026271 3300047673 Bacteria 3216
166 Ga0495602_0021427 3300048088 Bacteria 6362
167 Ga0495602_0036778 3300048088 Bacteria 4552
168 Ga0495614_0002106 3300048089 Bacteria 8792
169 Ga0495614_0025732 3300048089 Bacteria 2537
170 Ga0495614_0087839 3300048089 Bacteria 1350
171 Ga0501033_0028672 3300049570 Bacteria 4182
172 Ga0501034_0224787 3300049571 Bacteria 1828
173 Ga0501035_0117681 3300049822 Bacteria 2325
174 nmdc:mga07m45_45695_c1 3300050496 Bacteria 2459
175 nmdc:mga0sz30_11468_c1 3300050516 Bacteria 3422
176 Ga0495595_0181447 3300053084 Bacteria 1044
177 Ga0495619_0038366 3300053085 Bacteria 3125
178 Ga0495619_0064291 3300053085 Bacteria 2446
179 Ga0500583_0012378 3300053092 Bacteria 3253
180 Ga0500640_009775 3300053095 Bacteria 3848
181 Ga0500641_0018839 3300053096 Bacteria 2602
182 Ga0500572_002276 3300053111 Bacteria 4669
183 Ga0500573_0116885 3300053140 Bacteria 1488
184 Ga0500600_0178606 3300053149 Bacteria 1024
185 Ga0466962_0027054 3300061719 Bacteria 2754
186 Ga0466962_0082565 3300061719 Bacteria 1537
187 2547412525 2547132111 Bacteria 8013147
188 2585311209 2582581313 Bacteria 10042643
189 2585311850 2582581314 Bacteria 11452267
190 2616693486 2616644814 Bacteria 11555299
191 2623501077 2622736605 Bacteria 4992138
192 2643759524 2643221548 Bacteria 8053412
193 2644266449 2643221647 Bacteria 10741251
194 2644438016 2643221678 Bacteria 9540101
195 2644463060 2643221682 Bacteria 6743283
196 2785339915 2784746763 Bacteria 9783172
197 2785372800 2784746768 Bacteria 10036182
198 2786675173 2786546132 Bacteria 10419719
199 2793982499 2791355406 Bacteria 11364898
200 2808914755 2808606375 Bacteria 9466072
201 2812354542 2811994879 Bacteria 9313447
202 2812477482 2811994917 Bacteria 7761064
203 2819693897 2818991463 Bacteria 7948711
204 2852636164 2852635781 Bacteria 8251373
205 2862283227 2862281513 Bacteria 9621493
206 2862512190 2862507626 Bacteria 9425308
207 2862576645 2862574272 Bacteria 10567477
208 2863410087 2863404153 Bacteria 9672205
209 2870787225 2870782633 Bacteria 9624083
210 2877677890 2877676314 Bacteria 9512378
211 2912716149 2912715099 Bacteria 9460473
212 2941502458 2941499720 Bacteria 7599444
213 2946071125 2946064051 Bacteria 8957905
214 2947225607 2947224130 Bacteria 9938529
215 2954009781 2954002825 Bacteria 9173742
216 2954382680 2954380949 Bacteria 10050426
217 2954680202 2954673503 Bacteria 9685905
218 2954683949 2954682443 Bacteria 9862841
219 2954693503 2954691527 Bacteria 10720516
220 2954708597 2954701450 Bacteria 10834262
221 2954713166 2954711539 Bacteria 10867210
222 2954723126 2954721474 Bacteria 10456478
223 2954738703 2954731030 Bacteria 10243860
224 2954742033 2954740390 Bacteria 10229294
225 2954757561 2954749733 Bacteria 10366972
226 2954761011 2954759201 Bacteria 9358192
227 2990090607 2990088156 Bacteria 6657676
228 3006496933 3006493962 Bacteria 8825450
229 643597895 643348564 Bacteria 8839022
230 8003318128 8003314358 Bacteria 10575343
231 8047896477 8047893842 Bacteria 11723082
232 8048132358 8048127548 Bacteria 11053136
233 8048362458 8048356638 Bacteria 11044339
234 8048373491 8048369669 Bacteria 11666822
235 8048384751 8048379754 Bacteria 11877923
236 8048410877 8048406513 Bacteria 8936924
237 8056834275 8056829672 Bacteria 9045328
238 Ga0373933_0090109
239 JGI25406J46586_10001081
240 rootL2_10137787
241 rootH1_10003349
242 Ga0070679_100033554
243 Ga0068856_100063016
244 Ga0081539_10000032
245 Ga0075370_10011488
246 Ga0182008_10168699
247 Ga0183367_1001
248 Ga0207647_10020685
249 Ga0207669_10322052
250 Ga0207678_10343647
251 Ga0207702_10161487
252 Ga0307515_10001513
253 Ga0307515_10014250
254 Ga0307515_10075295
255 Ga0307511_10002619
256 Ga0307511_10081488
257 Ga0307512_10005075
258 Ga0307512_10010207
259 Ga0307513_10005869
260 Ga0307513_10068019
261 Ga0307508_10012163
262 Ga0307508_10067754
263 Ga0307516_10021811
264 Ga0307410_10018768
265 Ga0307406_10201012
266 Ga0307412_10412425
267 Ga0307409_100148367
268 Ga0307416_100626867
269 Ga0307415_100041613
270 Ga0307507_10001937
271 Ga0307507_10014438
272 Ga0307507_10108441
273 Ga0307510_10129930
274 Ga0307510_10183720
275 Ga0373937_0036598
276 Ga0395898_0003371
277 Ga0395898_0003470
278 Ga0395898_0009187
279 Ga0395905_0161359
280 Ga0395901_0314806
281 Ga0439436_0008664
282 Ga0439439_0003672
283 Ga0439433_0005962
284 Ga0439433_0017872
285 Ga0439442_058247
286 Ga0439449_0001475
287 Ga0439449_0017738
288 Ga0439457_002574
289 Ga0439462_0050705
290 Ga0450899_001735
291 Ga0450903_000206
292 Ga0450906_002606
293 Ga0439458_0001366
294 Ga0450908_012271
295 Ga0466969_0008955
296 Ga0466972_0003594
297 Ga0466966_0002447
298 Ga0466964_0082855
299 Ga0466971_0065261
300 Ga0466968_0027667
301 Ga0466970_0107664
302 Ga0466960_0095195
303 Ga0466959_0020255
304 Ga0466959_0030094
305 Ga0466959_0042024
306 Ga0466967_0007929
307 Ga0466967_0010501
308 Ga0466967_0473095
309 Ga0466967_0607577
310 Ga0495617_006903
311 Ga0495627_010164
312 Ga0495592_0006424
313 Ga0495592_0063908
314 Ga0495603_0005980
315 Ga0495603_0009906
316 Ga0495638_0043821
317 Ga0495651_0002735
318 Ga0495651_0014887
319 Ga0495651_0161727
320 Ga0495653_0036942
321 Ga0495580_0137464
322 Ga0495582_0043711
323 Ga0495639_0186375
324 Ga0495662_0001839
325 Ga0495664_0000843
326 Ga0495584_0091527
327 Ga0495585_0109638
328 Ga0495594_0032400
329 Ga0495608_0013773
330 Ga0495608_0085895
331 Ga0495616_0019697
332 Ga0495618_0016960
333 Ga0495620_0006811
334 Ga0495628_0018227
335 Ga0495628_0025985
336 Ga0495628_0095808
337 Ga0495630_0148983
338 Ga0495632_0093283
339 Ga0495643_0006323
340 Ga0495648_0042228
341 Ga0495642_0047992
342 Ga0495652_0027431
343 Ga0495652_0083031
344 Ga0495640_0085598
345 Ga0495587_0126452
346 Ga0495609_0022028
347 Ga0495645_0027127
348 Ga0495633_0049483
349 Ga0495667_0000622
350 Ga0495634_0023082
351 Ga0495611_0008147
352 Ga0495625_0002674
353 Ga0495625_0014621
354 Ga0495635_0000520
355 Ga0495635_0003023
356 Ga0495657_0003443
357 Ga0495657_0010577
358 Ga0495657_0020849
359 Ga0495623_0046875
360 Ga0495646_0018627
361 Ga0495646_0050436
362 Ga0495646_0156334
363 Ga0495658_0106680
364 Ga0495613_0001531
365 Ga0495613_0031417
366 Ga0495613_0102579
367 Ga0495624_0018888
368 Ga0495649_0048676
369 Ga0495589_0002374
370 Ga0495589_0028631
371 Ga0495600_0029678
372 Ga0495600_0041123
373 Ga0495660_0033678
374 Ga0495660_0080151
375 Ga0495581_0012229
376 Ga0495581_0101975
377 Ga0495604_0006222
378 Ga0495604_0041141
379 Ga0495604_0141192
380 Ga0495674_0035673
381 Ga0495676_0003597
382 Ga0495676_0080809
383 Ga0495676_0085599
384 Ga0495676_0100248
385 Ga0495680_0005837
386 Ga0495680_0084199
387 Ga0495687_014931
388 Ga0495687_015564
389 Ga0495687_015604
390 Ga0495687_025423
391 Ga0495675_0144626
392 Ga0495677_0023437
393 Ga0495685_007712
394 Ga0495685_035476
395 Ga0495685_036611
396 Ga0495681_0004310
397 Ga0495684_0058932
398 Ga0495684_0361044
399 Ga0495686_0036969
400 Ga0495686_0040202
401 Ga0495593_0003672
402 Ga0495593_0026271
403 Ga0495602_0021427
404 Ga0495602_0036778
405 Ga0495614_0002106
406 Ga0495614_0025732
407 Ga0495614_0087839
408 Ga0501033_0028672
409 Ga0501034_0224787
410 Ga0501035_0117681
411 nmdc:mga07m45_45695_c1
412 nmdc:mga0sz30_11468_c1
413 Ga0495595_0181447
414 Ga0495619_0038366
415 Ga0495619_0064291
416 Ga0500583_0012378
417 Ga0500640_009775
418 Ga0500641_0018839
419 Ga0500572_002276
420 Ga0500573_0116885
421 Ga0500600_0178606
422 Ga0466962_0027054
423 Ga0466962_0082565
424 2547412525
425 2585311209
426 2585311850
427 2616693486
428 2623501077
429 2643759524
430 2644266449
431 2644438016
432 2644463060
433 2785339915
434 2785372800
435 2786675173
436 2793982499
437 2808914755
438 2812354542
439 2812477482
440 2819693897
441 2852636164
442 2862283227
443 2862512190
444 2862576645
445 2863410087
446 2870787225
447 2877677890
448 2912716149
449 2941502458
450 2946071125
451 2947225607
452 2954009781
453 2954382680
454 2954680202
455 2954683949
456 2954693503
457 2954708597
458 2954713166
459 2954723126
460 2954738703
461 2954742033
462 2954757561
463 2954761011
464 2990090607
465 3006496933
466 643597895
467 8003318128
468 8047896477
469 8048132358
470 8048362458
471 8048373491
472 8048384751
473 8048410877
474 8056834275

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08501

Shikimate_dh_N

Shikimate dehydrogenase substrate binding domain

23

110

0.96

PF18317

SDH_C

Shikimate 5'-dehydrogenase C-terminal domain

264

292

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
2hk8-assembly2.cif.gz_B crystal structure of shikimate dehydrogenase from aquifex aeolicus at 2.35 angstrom resolution 0.9365 11 288
3jyo-assembly1.cif.gz_A quinate dehydrogenase from corynebacterium glutamicum in complex with nad 0.9293 11 290
2d5c-assembly1.cif.gz_B crystal structure of shikimate 5-dehydrogenase (aroe) from thermus thermophilus hb8 in complex with shikimate 0.9246 12 289
3jyo-assembly1.cif.gz_A quinate dehydrogenase from corynebacterium glutamicum in complex with nad 0.9199 11 290
2hk8-assembly2.cif.gz_B crystal structure of shikimate dehydrogenase from aquifex aeolicus at 2.35 angstrom resolution 0.9094 11 288
ID Description Score Start End Superfamily
2ez3A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9586 114 256 3.40.50.720
af_P0A6D5_8_104_1.10.560.10 Mainly Alpha;Orthogonal Bundle;GROEL; domain 1;GroEL-like equatorial domain 0.9471 13 112 1.10.560.10
af_P0A6D5_3_112_3.40.50.10860 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Leucine Dehydrogenase, chain A, domain 1 0.9461 11 119 3.40.50.10860
2ez3A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9457 114 256 3.40.50.720
af_Q58484_1_94_3.40.50.10860 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Leucine Dehydrogenase, chain A, domain 1 0.9402 10 102 3.40.50.10860
ID Description Score Start End GO Terms
AF-A0A0N0KAT2-F1-model_v4 Shikimate dehydrogenase (NADP(+)) (SDH) (EC 1.1.1.25) 0.9796 11 290 GO:0004764
GO:0005829
GO:0008652
GO:0009073
GO:0009423
GO:0019632
GO:0050661
AF-A0A829XXG9-F1-model_v4 deleted 0.9734 30 291
AF-A0A1S1PFM4-F1-model_v4 deleted 0.972 9 294
AF-F0G485-F1-model_v4 Shikimate 5-dehydrogenase (EC 1.1.1.25) 0.9699 9 181 GO:0004764
GO:0005829
GO:0008652
GO:0009073
GO:0009423
GO:0019632
GO:0050661
AF-A0A3D3SRB2-F1-model_v4 deleted 0.9698 11 193

Map