F350176

General Info

Members Datasets Scaffolds Average Seq Length
237 150 235 403

Family's Representative Sequence

Representative Sequence 3300035398|Ga0316574_0050357|Ga0316574_0050357_100_1449
Length 449
Sequence VSSGLRALRLTILLLAALAFIGALGAARDGPGAASVAPGEGGRWSAGPVVGPRGAEKRQDAPVPAVAALRMSAAKSTSRSDPSHTLERKLAEIVDAIRDDRPDDALRQVDSLISQHPTFRLAHLIRGDLLRARAQPLRRFGDVSKTAPQEAVDALRNEALARLDAMREPPRNGLAPRYIVKLHPAQRHALVIDSRRSRLYLFENDHGVAHLVADYYVTLGKGGVDKTREGDQKTPLGVYHVTSTLPRDKLTDFYGVGAFPINYPNAWDRRLGRNGFGIWLHGTPSDTYSRPPRASDGCIVLANPDLESVGRQVQTGLTPVIIADEIEWTTEAELTQDRRSIEAALESWRKDWESRNTDRYLTHYSPRFRSADQDYSAWSAHKHRVNAAKQWIRVGLSNTAIFRYPRERNFFVVAFDQDYRSSNLSNRMRKVQYWVNEEGHWKILYEGPA

Samples

Sample ID Description Type Environment
1 2547132512 Azospira oryzae 6a3 Isolate Unclassified
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
21 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
22 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
23 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
24 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
25 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
26 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
31 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
32 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
33 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
34 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
35 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
36 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
37 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
38 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
39 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
40 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
41 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
45 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
46 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
47 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
48 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
49 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
51 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
52 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
53 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
54 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
55 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
56 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
58 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
59 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
60 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
61 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
62 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
63 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
64 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
65 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
66 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
67 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
68 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
69 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
70 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
96 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
99 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
100 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
101 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
102 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
103 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
104 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
105 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
106 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
107 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
108 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
109 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
110 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
111 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
112 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
113 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
114 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
115 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
116 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
117 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
118 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
119 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
120 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
121 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
122 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
123 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
124 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
125 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
126 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
140 3300049656 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought Metagenome Rhizosphere
141 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
142 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
145 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
146 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
147 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
148 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
149 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
150 639633007 Azoarcus olearius BH72 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.16
Metatranscriptomes 0
Isolates 0.84

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.27
Nodule 0
Rhizoplane 1.27
Rhizosphere 95.78
Stem 0
Stem Tuber 0
Unclassified 1.69

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10020295 3300003203 Bacteria 2690
2 Ga0070658_10126828 3300005327 Bacteria 2125
3 Ga0070676_10043377 3300005328 Bacteria 2614
4 Ga0070690_100036632 3300005330 Bacteria 3085
5 Ga0070690_100040045 3300005330 Bacteria 2962
6 Ga0070690_100053210 3300005330 Bacteria 2589
7 Ga0068869_100001041 3300005334 Bacteria 16142
8 Ga0068869_100096157 3300005334 Bacteria 2235
9 Ga0070680_100083005 3300005336 Bacteria 2646
10 Ga0068868_100262945 3300005338 Bacteria 1456
11 Ga0070660_100069346 3300005339 Bacteria 2749
12 Ga0070689_100007317 3300005340 Bacteria 7703
13 Ga0070689_100017271 3300005340 Bacteria 5295
14 Ga0070689_100070030 3300005340 Bacteria 2737
15 Ga0070689_100070621 3300005340 Bacteria 2727
16 Ga0070691_10013640 3300005341 Bacteria 3725
17 Ga0070687_100015970 3300005343 Bacteria 3409
18 Ga0070661_100002522 3300005344 Bacteria 12536
19 Ga0070692_10056072 3300005345 Bacteria 2062
20 Ga0070669_100133156 3300005353 Bacteria 1909
21 Ga0070675_100009054 3300005354 Bacteria 7734
22 Ga0070674_100035116 3300005356 Bacteria 3355
23 Ga0070688_100079692 3300005365 Bacteria 2117
24 Ga0070688_100127663 3300005365 Bacteria 1711
25 Ga0070659_100002994 3300005366 Bacteria 12022
26 Ga0070659_100076976 3300005366 Bacteria 2660
27 Ga0070659_100120409 3300005366 Bacteria 2125
28 Ga0070714_100001046 3300005435 Bacteria 19736
29 Ga0070701_10009318 3300005438 Bacteria 4295
30 Ga0070705_100063287 3300005440 Bacteria 2206
31 Ga0070700_100025065 3300005441 Bacteria 3509
32 Ga0070694_100012253 3300005444 Bacteria 5327
33 Ga0070694_100047517 3300005444 Bacteria 2885
34 Ga0070663_100128569 3300005455 Unclassified 1921
35 Ga0070678_100083628 3300005456 Bacteria 2426
36 Ga0068867_100002566 3300005459 Bacteria 12806
37 Ga0068867_100082604 3300005459 Bacteria 2424
38 Ga0070699_100038217 3300005518 Bacteria 4156
39 Ga0070679_100201847 3300005530 Bacteria 1954
40 Ga0070684_100023015 3300005535 Bacteria 5204
41 Ga0068853_100153325 3300005539 Bacteria 2075
42 Ga0070672_100009663 3300005543 Bacteria 6659
43 Ga0070686_100002295 3300005544 Bacteria 10553
44 Ga0070695_100105943 3300005545 Bacteria 1901
45 Ga0070695_100131571 3300005545 Bacteria 1725
46 Ga0070696_100050253 3300005546 Bacteria 2898
47 Ga0070696_100105977 3300005546 Bacteria 2020
48 Ga0070696_100113448 3300005546 Bacteria 1954
49 Ga0070693_100051454 3300005547 Bacteria 2359
50 Ga0070704_100291625 3300005549 Bacteria 1356
51 Ga0068854_100079000 3300005578 Bacteria 2425
52 Ga0070702_100044522 3300005615 Bacteria 2506
53 Ga0068866_10004377 3300005718 Bacteria 5797
54 Ga0068861_100121321 3300005719 Bacteria 2109
55 Ga0068858_100039106 3300005842 Bacteria 4400
56 Ga0068858_100235279 3300005842 Bacteria 1737
57 Ga0068858_100281311 3300005842 Bacteria 1584
58 Ga0068860_100041907 3300005843 Bacteria 4374
59 Ga0068862_100006656 3300005844 Bacteria 9585
60 Ga0081539_10000178 3300005985 Bacteria 149201
61 Ga0075432_10035184 3300006058 Bacteria 1740
62 Ga0070716_100014638 3300006173 Bacteria 4021
63 Ga0075366_10000403 3300006195 Bacteria 20185
64 Ga0097621_100079347 3300006237 Bacteria 2728
65 Ga0097621_100108411 3300006237 Bacteria 2344
66 Ga0068871_100011831 3300006358 Bacteria 6415
67 Ga0068871_100037228 3300006358 Bacteria 3879
68 Ga0075430_100007215 3300006846 Bacteria 9382
69 Ga0075433_10041054 3300006852 Bacteria 4008
70 Ga0068865_100000713 3300006881 Bacteria 18690
71 Ga0075436_100006937 3300006914 Bacteria 7751
72 Ga0099794_10016122 3300007265 Bacteria 3309
73 Ga0099794_10017807 3300007265 Bacteria 3173
74 Ga0099794_10030468 3300007265 Bacteria 2520
75 Ga0111539_10002495 3300009094 Bacteria 24393
76 Ga0105245_10004756 3300009098 Bacteria 11984
77 Ga0105245_10034762 3300009098 Bacteria 4471
78 Ga0105245_10165843 3300009098 Bacteria 2100
79 Ga0105245_10219066 3300009098 Bacteria 1835
80 Ga0105243_10003029 3300009148 Bacteria 13852
81 Ga0105242_10004877 3300009176 Bacteria 10384
82 Ga0105242_10015263 3300009176 Bacteria 5965
83 Ga0105242_10047481 3300009176 Bacteria 3486
84 Ga0105242_10111393 3300009176 Bacteria 2334
85 Ga0105248_10090974 3300009177 Bacteria 3437
86 Ga0105249_10082428 3300009553 Bacteria 2993
87 Ga0157373_10030028 3300013100 Bacteria 3912
88 Ga0157370_10004076 3300013104 Bacteria 16934
89 Ga0157374_10000600 3300013296 Bacteria 31879
90 Ga0157378_10001563 3300013297 Bacteria 20688
91 Ga0157378_10024389 3300013297 Bacteria 5321
92 Ga0157378_10024949 3300013297 Bacteria 5265
93 Ga0157378_10052343 3300013297 Bacteria 3633
94 Ga0157378_10281623 3300013297 Bacteria 1603
95 Ga0157375_10184087 3300013308 Bacteria 2241
96 Ga0157380_10175010 3300014326 Bacteria 1879
97 Ga0157380_10237208 3300014326 Bacteria 1642
98 Ga0157379_10127641 3300014968 Bacteria 2289
99 Ga0157376_10046963 3300014969 Bacteria 3563
100 Ga0157376_10138399 3300014969 Bacteria 2181
101 Ga0207642_10001226 3300025899 Bacteria 7938
102 Ga0207642_10058139 3300025899 Unclassified 1783
103 Ga0207645_10078435 3300025907 Bacteria 2116
104 Ga0207643_10040597 3300025908 Bacteria 2621
105 Ga0207707_10115447 3300025912 Bacteria 2346
106 Ga0207662_10003207 3300025918 Bacteria 8370
107 Ga0207687_10031452 3300025927 Bacteria 3587
108 Ga0207664_10019217 3300025929 Bacteria 5046
109 Ga0207686_10011933 3300025934 Bacteria 4768
110 Ga0207709_10016589 3300025935 Bacteria 4096
111 Ga0207669_10094217 3300025937 Bacteria 1959
112 Ga0207704_10007017 3300025938 Bacteria 5291
113 Ga0207665_10040447 3300025939 Bacteria 3111
114 Ga0207691_10040893 3300025940 Bacteria 4282
115 Ga0207689_10000483 3300025942 Bacteria 37602
116 Ga0207689_10121450 3300025942 Bacteria 2149
117 Ga0207679_10128673 3300025945 Bacteria 2028
118 Ga0207640_10049965 3300025981 Bacteria 2711
119 Ga0207677_10125793 3300026023 Bacteria 1937
120 Ga0207703_10107640 3300026035 Bacteria 2373
121 Ga0207703_10149369 3300026035 Bacteria 2036
122 Ga0207639_10034402 3300026041 Bacteria 3745
123 Ga0207708_10001176 3300026075 Bacteria 19697
124 Ga0207702_10142569 3300026078 Unclassified 2170
125 Ga0207648_10000988 3300026089 Bacteria 32083
126 Ga0207674_10019195 3300026116 Bacteria 7413
127 Ga0207675_100005751 3300026118 Bacteria 11862
128 Ga0207675_100163570 3300026118 Bacteria 2124
129 Ga0207683_10011810 3300026121 Bacteria 7452
130 Ga0209999_1009641 3300027543 Bacteria 1743
131 Ga0209588_1004034 3300027671 Bacteria 4110
132 Ga0268264_10061515 3300028381 Bacteria 3150
133 Ga0265336_10000808 3300028666 Bacteria 16515
134 Ga0265324_10000023 3300029957 Bacteria 164128
135 Ga0265324_10000147 3300029957 Bacteria 54400
136 Ga0265330_10027973 3300031235 Bacteria 2544
137 Ga0265332_10000013 3300031238 Bacteria 250095
138 Ga0265325_10000553 3300031241 Bacteria 27118
139 Ga0265331_10025099 3300031250 Bacteria 3010
140 Ga0265331_10031860 3300031250 Bacteria 2618
141 Ga0265327_10000739 3300031251 Bacteria 51006
142 Ga0265327_10044250 3300031251 Bacteria 2376
143 Ga0265316_10069753 3300031344 Bacteria 2712
144 Ga0265316_10115141 3300031344 Bacteria 2033
145 Ga0307509_10000006 3300031507 Bacteria 421538
146 Ga0307408_100321256 3300031548 Bacteria 1304
147 Ga0316575_10000093 3300031665 Bacteria 21743
148 Ga0265314_10000451 3300031711 Bacteria 54865
149 Ga0265314_10048933 3300031711 Bacteria 2963
150 Ga0316574_0050357 3300035398 Bacteria 2592
151 Ga0373927_0010143 3300035695 Bacteria 6300
152 Ga0373933_0076331 3300035724 Bacteria 2047
153 Ga0395899_0003482 3300037312 Bacteria 12471
154 Ga0395900_0038998 3300037418 Bacteria 4897
155 Ga0395901_0007575 3300038443 Bacteria 10965
156 Ga0400483_080705 3300039062 Bacteria 9934
157 Ga0451577_0000013 3300042876 Bacteria 550689
158 Ga0451577_0000635 3300042876 Bacteria 56126
159 Ga0451577_0018870 3300042876 Bacteria 6348
160 Ga0451577_0046148 3300042876 Bacteria 3898
161 Ga0451577_0077673 3300042876 Bacteria 2960
162 Ga0451577_0134007 3300042876 Bacteria 2223
163 Ga0451577_0162845 3300042876 Bacteria 2009
164 Ga0451577_0269327 3300042876 Bacteria 1542
165 Ga0466972_0000087 3300044658 Bacteria 84646
166 Ga0466972_0004833 3300044658 Bacteria 6758
167 Ga0453683_0000033 3300044673 Bacteria 241479
168 Ga0466965_0000279 3300044683 Bacteria 16814
169 Ga0466964_0031289 3300044706 Bacteria 2109
170 Ga0453684_0000005 3300044712 Bacteria 1431632
171 Ga0453684_0000029 3300044712 Bacteria 757969
172 Ga0453684_0000085 3300044712 Bacteria 397817
173 Ga0453684_0000102 3300044712 Bacteria 366870
174 Ga0453684_0000195 3300044712 Bacteria 265496
175 Ga0453684_0004267 3300044712 Bacteria 30523
176 Ga0453684_0005030 3300044712 Bacteria 26843
177 Ga0453684_0005277 3300044712 Bacteria 25815
178 Ga0453684_0021720 3300044712 Bacteria 9569
179 Ga0453684_0191125 3300044712 Bacteria 2395
180 Ga0451576_0000013 3300045051 Bacteria 665120
181 Ga0451576_0000018 3300045051 Bacteria 550689
182 Ga0451576_0000386 3300045051 Bacteria 102813
183 Ga0451576_0000418 3300045051 Bacteria 98732
184 Ga0451576_0002224 3300045051 Bacteria 29850
185 Ga0451576_0003600 3300045051 Bacteria 21067
186 Ga0451576_0004022 3300045051 Bacteria 19552
187 Ga0451576_0012255 3300045051 Bacteria 9652
188 Ga0451576_0055742 3300045051 Bacteria 4134
189 Ga0451576_0064649 3300045051 Bacteria 3810
190 Ga0451576_0181521 3300045051 Bacteria 2197
191 Ga0451576_0429216 3300045051 Bacteria 1387
192 Ga0496106_0315963 3300048909 Bacteria 1254
193 Ga0496108_0054688 3300048911 Bacteria 3350
194 Ga0496108_0146206 3300048911 Unclassified 2038
195 Ga0501031_0001459 3300049568 Bacteria 14679
196 Ga0501031_0027901 3300049568 Bacteria 3679
197 Ga0501032_0003220 3300049569 Bacteria 12557
198 Ga0501032_0007898 3300049569 Bacteria 7746
199 Ga0501033_0000123 3300049570 Bacteria 74947
200 Ga0501033_0011647 3300049570 Bacteria 6725
201 Ga0501033_0024962 3300049570 Bacteria 4504
202 Ga0501034_0005866 3300049571 Bacteria 13352
203 Ga0501034_0022956 3300049571 Bacteria 6358
204 Ga0501036_0005463 3300049572 Bacteria 10303
205 Ga0501036_0008048 3300049572 Bacteria 8633
206 Ga0501037_0026421 3300049573 Bacteria 4292
207 Ga0501037_0043069 3300049573 Unclassified 3317
208 Ga0501037_0115699 3300049573 Bacteria 1930
209 Ga0501038_0009922 3300049574 Bacteria 8719
210 Ga0501038_0015224 3300049574 Bacteria 6992
211 Ga0501038_0024404 3300049574 Bacteria 5395
212 Ga0501039_0010672 3300049575 Bacteria 6997
213 Ga0501039_0011529 3300049575 Bacteria 6728
214 Ga0501040_0012441 3300049576 Bacteria 5576
215 Ga0501042_0006427 3300049578 Bacteria 7624
216 Ga0501043_0004999 3300049579 Bacteria 10730
217 Ga0501043_0122924 3300049579 Bacteria 2035
218 Ga0501046_0014445 3300049580 Bacteria 6663
219 Ga0501048_0007771 3300049582 Bacteria 8130
220 Ga0501070_0261956 3300049586 Bacteria 1413
221 Ga0501209_000186 3300049656 Bacteria 7182
222 Ga0501280_000596 3300049776 Bacteria 8316
223 Ga0501035_0003619 3300049822 Bacteria 14744
224 Ga0501035_0068697 3300049822 Bacteria 3141
225 Ga0501044_0001325 3300049823 Bacteria 29123
226 Ga0501044_0001550 3300049823 Bacteria 26951
227 Ga0501044_0008143 3300049823 Bacteria 11502
228 Ga0501044_0158036 3300049823 Bacteria 2245
229 Ga0501045_0001496 3300049824 Bacteria 15566
230 nmdc:mga0k408_3460_c1 3300050493 Bacteria 8354
231 nmdc:mga0qj67_82668_c1 3300050509 Bacteria 2575
232 nmdc:mga08y16_8182_c1 3300050511 Bacteria 10942
233 nmdc:mga0a205_252369_c1 3300050515 Bacteria 1643
234 nmdc:mga0a205_65299_c1 3300050515 Bacteria 3516
235 Ga0500636_0000541 3300053177 Bacteria 20563

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300035724 Ga0373933_0076331 Ga0373933_0076331_349_1470 334
2 3300050515 nmdc:mga0a205_252369_c1 nmdc:mga0a205_252369_c1_21_1049 336
3 3300049568 Ga0501031_0027901 Ga0501031_0027901_30_1118 347
4 3300031507 Ga0307509_10000006 Ga0307509_10000006366 353
5 3300009094 Ga0111539_10002495 Ga0111539_100024952 360
6 3300050511 nmdc:mga08y16_8182_c1 nmdc:mga08y16_8182_c1_9572_10801 360
7 3300049569 Ga0501032_0003220 Ga0501032_0003220_983_2173 361
8 3300049573 Ga0501037_0115699 Ga0501037_0115699_564_1754 361
9 3300049575 Ga0501039_0011529 Ga0501039_0011529_5247_6437 361
10 3300049579 Ga0501043_0122924 Ga0501043_0122924_326_1516 361
11 3300049822 Ga0501035_0003619 Ga0501035_0003619_3183_4373 361
12 3300049823 Ga0501044_0158036 Ga0501044_0158036_456_1646 361
13 3300044658 Ga0466972_0000087 Ga0466972_0000087_26598_27761 365
14 3300049568 Ga0501031_0001459 Ga0501031_0001459_3049_4290 367
15 3300005338 Ga0068868_100262945 Ga0068868_1002629451 368
16 3300005366 Ga0070659_100120409 Ga0070659_1001204092 368
17 3300013100 Ga0157373_10030028 Ga0157373_100300282 368
18 3300049570 Ga0501033_0024962 Ga0501033_0024962_140_1378 368
19 3300049572 Ga0501036_0005463 Ga0501036_0005463_8625_9863 368
20 3300048909 Ga0496106_0315963 Ga0496106_0315963_22_1176 369
21 3300048911 Ga0496108_0146206 Ga0496108_0146206_602_1831 369
22 3300049572 Ga0501036_0008048 Ga0501036_0008048_1336_2670 369
23 3300049574 Ga0501038_0009922 Ga0501038_0009922_44_1378 369
24 3300049579 Ga0501043_0004999 Ga0501043_0004999_8072_9406 369
25 3300049822 Ga0501035_0068697 Ga0501035_0068697_1257_2591 369
26 3300049823 Ga0501044_0001325 Ga0501044_0001325_24827_26161 369
27 3300042876 Ga0451577_0046148 Ga0451577_0046148_464_1618 370
28 3300044712 Ga0453684_0005030 Ga0453684_0005030_3754_4908 370
29 3300045051 Ga0451576_0002224 Ga0451576_0002224_11523_12668 370
30 3300045051 Ga0451576_0003600 Ga0451576_0003600_11084_12238 370
31 3300049569 Ga0501032_0007898 Ga0501032_0007898_2876_4117 370
32 3300049570 Ga0501033_0000123 Ga0501033_0000123_1280_2521 370
33 3300049570 Ga0501033_0011647 Ga0501033_0011647_1722_2963 370
34 3300049571 Ga0501034_0005866 Ga0501034_0005866_11172_12413 370
35 3300049573 Ga0501037_0026421 Ga0501037_0026421_2733_3974 370
36 3300049573 Ga0501037_0043069 Ga0501037_0043069_1702_2943 370
37 3300049574 Ga0501038_0015224 Ga0501038_0015224_722_1963 370
38 3300049574 Ga0501038_0024404 Ga0501038_0024404_3442_4683 370
39 3300049575 Ga0501039_0010672 Ga0501039_0010672_3845_5086 370
40 3300049576 Ga0501040_0012441 Ga0501040_0012441_598_1839 370
41 3300049578 Ga0501042_0006427 Ga0501042_0006427_3825_5066 370
42 3300049580 Ga0501046_0014445 Ga0501046_0014445_3075_4316 370
43 3300049582 Ga0501048_0007771 Ga0501048_0007771_3068_4309 370
44 3300049586 Ga0501070_0261956 Ga0501070_0261956_42_1283 370
45 3300049823 Ga0501044_0001550 Ga0501044_0001550_1486_2727 370
46 3300049823 Ga0501044_0008143 Ga0501044_0008143_2876_4117 370
47 3300049824 Ga0501045_0001496 Ga0501045_0001496_6466_7707 370
48 3300014326 Ga0157380_10175010 Ga0157380_101750102 372
49 3300005518 Ga0070699_100038217 Ga0070699_1000382173 373
50 3300028666 Ga0265336_10000808 Ga0265336_100008089 373
51 3300029957 Ga0265324_10000023 Ga0265324_10000023132 373
52 3300031241 Ga0265325_10000553 Ga0265325_1000055325 373
53 3300031711 Ga0265314_10048933 Ga0265314_100489332 373
54 3300039062 Ga0400483_080705 Ga0400483_080705_1480_2730 373
55 3300005327 Ga0070658_10126828 Ga0070658_101268282 375
56 3300005330 Ga0070690_100036632 Ga0070690_1000366324 375
57 3300005340 Ga0070689_100017271 Ga0070689_1000172714 375
58 3300005340 Ga0070689_100070030 Ga0070689_1000700303 375
59 3300005353 Ga0070669_100133156 Ga0070669_1001331562 375
60 3300005354 Ga0070675_100009054 Ga0070675_1000090547 375
61 3300005365 Ga0070688_100079692 Ga0070688_1000796922 375
62 3300005456 Ga0070678_100083628 Ga0070678_1000836281 375
63 3300005459 Ga0068867_100082604 Ga0068867_1000826043 375
64 3300005543 Ga0070672_100009663 Ga0070672_1000096635 375
65 3300005842 Ga0068858_100235279 Ga0068858_1002352791 375
66 3300006058 Ga0075432_10035184 Ga0075432_100351842 375
67 3300006237 Ga0097621_100108411 Ga0097621_1001084112 375
68 3300006358 Ga0068871_100037228 Ga0068871_1000372282 375
69 3300009098 Ga0105245_10034762 Ga0105245_100347623 375
70 3300009176 Ga0105242_10111393 Ga0105242_101113932 375
71 3300013297 Ga0157378_10024949 Ga0157378_100249494 375
72 3300025912 Ga0207707_10115447 Ga0207707_101154471 375
73 3300025937 Ga0207669_10094217 Ga0207669_100942172 375
74 3300025940 Ga0207691_10040893 Ga0207691_100408933 375
75 3300025942 Ga0207689_10121450 Ga0207689_101214502 375
76 3300026116 Ga0207674_10019195 Ga0207674_100191955 375
77 3300031251 Ga0265327_10000739 Ga0265327_1000073914 375
78 iso_pu_bacteria 639633007 639786187 375
79 3300029957 Ga0265324_10000147 Ga0265324_1000014722 376
80 3300031250 Ga0265331_10025099 Ga0265331_100250993 376
81 3300031711 Ga0265314_10000451 Ga0265314_1000045122 376
82 3300042876 Ga0451577_0000013 Ga0451577_0000013_320386_321546 376
83 3300044673 Ga0453683_0000033 Ga0453683_0000033_199229_200389 376
84 3300044712 Ga0453684_0000029 Ga0453684_0000029_165964_167124 376
85 3300044712 Ga0453684_0000085 Ga0453684_0000085_76272_77432 376
86 3300045051 Ga0451576_0000018 Ga0451576_0000018_229144_230304 376
87 3300009176 Ga0105242_10047481 Ga0105242_100474813 377
88 3300013296 Ga0157374_10000600 Ga0157374_100006003 377
89 3300013297 Ga0157378_10024389 Ga0157378_100243894 377
90 3300031251 Ga0265327_10044250 Ga0265327_100442502 377
91 3300044658 Ga0466972_0004833 Ga0466972_0004833_5093_6406 377
92 3300044683 Ga0466965_0000279 Ga0466965_0000279_9445_10758 377
93 3300044706 Ga0466964_0031289 Ga0466964_0031289_190_1503 377
94 3300031235 Ga0265330_10027973 Ga0265330_100279732 378
95 3300031665 Ga0316575_10000093 Ga0316575_1000009323 378
96 3300045051 Ga0451576_0000013 Ga0451576_0000013_595506_596675 378
97 3300005546 Ga0070696_100113448 Ga0070696_1001134482 379
98 3300006195 Ga0075366_10000403 Ga0075366_100004032 379
99 3300014969 Ga0157376_10046963 Ga0157376_100469634 379
100 3300025899 Ga0207642_10058139 Ga0207642_100581391 379
101 3300025939 Ga0207665_10040447 Ga0207665_100404472 379
102 3300049776 Ga0501280_000596 Ga0501280_000596_5072_6301 379
103 3300050493 nmdc:mga0k408_3460_c1 nmdc:mga0k408_3460_c1_4021_5229 379
104 3300005549 Ga0070704_100291625 Ga0070704_1002916251 380
105 3300013297 Ga0157378_10281623 Ga0157378_102816231 380
106 3300031238 Ga0265332_10000013 Ga0265332_1000001341 380
107 3300038443 Ga0395901_0007575 Ga0395901_0007575_6604_7851 380
108 3300042876 Ga0451577_0134007 Ga0451577_0134007_910_2211 380
109 iso_pu_bacteria 2547132512 2548846175 380
110 3300005339 Ga0070660_100069346 Ga0070660_1000693462 381
111 3300005344 Ga0070661_100002522 Ga0070661_1000025223 381
112 3300005366 Ga0070659_100002994 Ga0070659_1000029949 381
113 3300035695 Ga0373927_0010143 Ga0373927_0010143_4597_5766 381
114 3300037312 Ga0395899_0003482 Ga0395899_0003482_9893_11152 381
115 3300037418 Ga0395900_0038998 Ga0395900_0038998_942_2201 381
116 3300044712 Ga0453684_0191125 Ga0453684_0191125_810_1991 381
117 3300044712 Ga0453684_0004267 Ga0453684_0004267_21813_23000 382
118 3300005334 Ga0068869_100096157 Ga0068869_1000961572 383
119 3300005340 Ga0070689_100070621 Ga0070689_1000706212 383
120 3300005356 Ga0070674_100035116 Ga0070674_1000351162 383
121 3300005366 Ga0070659_100076976 Ga0070659_1000769762 383
122 3300005455 Ga0070663_100128569 Ga0070663_1001285692 383
123 3300005578 Ga0068854_100079000 Ga0068854_1000790002 383
124 3300005719 Ga0068861_100121321 Ga0068861_1001213212 383
125 3300005842 Ga0068858_100281311 Ga0068858_1002813111 383
126 3300006852 Ga0075433_10041054 Ga0075433_100410543 383
127 3300007265 Ga0099794_10030468 Ga0099794_100304682 383
128 3300009098 Ga0105245_10165843 Ga0105245_101658432 383
129 3300014326 Ga0157380_10237208 Ga0157380_102372082 383
130 3300025945 Ga0207679_10128673 Ga0207679_101286732 383
131 3300025981 Ga0207640_10049965 Ga0207640_100499651 383
132 3300026041 Ga0207639_10034402 Ga0207639_100344024 383
133 3300026078 Ga0207702_10142569 Ga0207702_101425692 383
134 3300026118 Ga0207675_100163570 Ga0207675_1001635702 383
135 3300042876 Ga0451577_0018870 Ga0451577_0018870_3063_4304 383
136 3300042876 Ga0451577_0269327 Ga0451577_0269327_232_1434 383
137 3300045051 Ga0451576_0004022 Ga0451576_0004022_16234_17436 383
138 3300048911 Ga0496108_0054688 Ga0496108_0054688_881_2119 383
139 3300049571 Ga0501034_0022956 Ga0501034_0022956_771_2012 383
140 3300049656 Ga0501209_000186 Ga0501209_000186_1732_2973 383
141 3300050515 nmdc:mga0a205_65299_c1 nmdc:mga0a205_65299_c1_1026_2180 383
142 3300005328 Ga0070676_10043377 Ga0070676_100433772 384
143 3300005330 Ga0070690_100040045 Ga0070690_1000400452 384
144 3300005334 Ga0068869_100001041 Ga0068869_1000010416 384
145 3300005336 Ga0070680_100083005 Ga0070680_1000830052 384
146 3300005340 Ga0070689_100007317 Ga0070689_1000073177 384
147 3300005341 Ga0070691_10013640 Ga0070691_100136403 384
148 3300005345 Ga0070692_10056072 Ga0070692_100560722 384
149 3300005365 Ga0070688_100127663 Ga0070688_1001276632 384
150 3300005435 Ga0070714_100001046 Ga0070714_1000010468 384
151 3300005438 Ga0070701_10009318 Ga0070701_100093184 384
152 3300005440 Ga0070705_100063287 Ga0070705_1000632873 384
153 3300005441 Ga0070700_100025065 Ga0070700_1000250652 384
154 3300005444 Ga0070694_100012253 Ga0070694_1000122533 384
155 3300005444 Ga0070694_100047517 Ga0070694_1000475172 384
156 3300005459 Ga0068867_100002566 Ga0068867_1000025669 384
157 3300005530 Ga0070679_100201847 Ga0070679_1002018472 384
158 3300005539 Ga0068853_100153325 Ga0068853_1001533252 384
159 3300005544 Ga0070686_100002295 Ga0070686_1000022953 384
160 3300005545 Ga0070695_100105943 Ga0070695_1001059432 384
161 3300005545 Ga0070695_100131571 Ga0070695_1001315712 384
162 3300005546 Ga0070696_100050253 Ga0070696_1000502534 384
163 3300005546 Ga0070696_100105977 Ga0070696_1001059772 384
164 3300005547 Ga0070693_100051454 Ga0070693_1000514542 384
165 3300005615 Ga0070702_100044522 Ga0070702_1000445222 384
166 3300005718 Ga0068866_10004377 Ga0068866_100043773 384
167 3300005842 Ga0068858_100039106 Ga0068858_1000391062 384
168 3300005843 Ga0068860_100041907 Ga0068860_1000419073 384
169 3300005844 Ga0068862_100006656 Ga0068862_1000066562 384
170 3300006173 Ga0070716_100014638 Ga0070716_1000146382 384
171 3300006358 Ga0068871_100011831 Ga0068871_1000118315 384
172 3300006881 Ga0068865_100000713 Ga0068865_1000007137 384
173 3300006914 Ga0075436_100006937 Ga0075436_1000069377 384
174 3300007265 Ga0099794_10016122 Ga0099794_100161222 384
175 3300007265 Ga0099794_10017807 Ga0099794_100178073 384
176 3300009098 Ga0105245_10004756 Ga0105245_100047569 384
177 3300009098 Ga0105245_10219066 Ga0105245_102190662 384
178 3300009148 Ga0105243_10003029 Ga0105243_100030296 384
179 3300009176 Ga0105242_10004877 Ga0105242_100048773 384
180 3300009176 Ga0105242_10015263 Ga0105242_100152634 384
181 3300009177 Ga0105248_10090974 Ga0105248_100909743 384
182 3300009553 Ga0105249_10082428 Ga0105249_100824284 384
183 3300013104 Ga0157370_10004076 Ga0157370_1000407610 384
184 3300013297 Ga0157378_10001563 Ga0157378_1000156317 384
185 3300013297 Ga0157378_10052343 Ga0157378_100523432 384
186 3300013308 Ga0157375_10184087 Ga0157375_101840872 384
187 3300014968 Ga0157379_10127641 Ga0157379_101276412 384
188 3300014969 Ga0157376_10138399 Ga0157376_101383992 384
189 3300025899 Ga0207642_10001226 Ga0207642_100012266 384
190 3300025907 Ga0207645_10078435 Ga0207645_100784352 384
191 3300025908 Ga0207643_10040597 Ga0207643_100405973 384
192 3300025927 Ga0207687_10031452 Ga0207687_100314523 384
193 3300025929 Ga0207664_10019217 Ga0207664_100192173 384
194 3300025934 Ga0207686_10011933 Ga0207686_100119332 384
195 3300025935 Ga0207709_10016589 Ga0207709_100165894 384
196 3300025938 Ga0207704_10007017 Ga0207704_100070173 384
197 3300025942 Ga0207689_10000483 Ga0207689_1000048316 384
198 3300026023 Ga0207677_10125793 Ga0207677_101257932 384
199 3300026035 Ga0207703_10107640 Ga0207703_101076402 384
200 3300026075 Ga0207708_10001176 Ga0207708_1000117617 384
201 3300026089 Ga0207648_10000988 Ga0207648_1000098818 384
202 3300026118 Ga0207675_100005751 Ga0207675_1000057513 384
203 3300026121 Ga0207683_10011810 Ga0207683_100118103 384
204 3300027543 Ga0209999_1009641 Ga0209999_10096412 384
205 3300027671 Ga0209588_1004034 Ga0209588_10040343 384
206 3300028381 Ga0268264_10061515 Ga0268264_100615152 384
207 3300031250 Ga0265331_10031860 Ga0265331_100318603 384
208 3300031344 Ga0265316_10069753 Ga0265316_100697533 384
209 3300031548 Ga0307408_100321256 Ga0307408_1003212562 384
210 3300042876 Ga0451577_0000635 Ga0451577_0000635_1894_3117 384
211 3300042876 Ga0451577_0077673 Ga0451577_0077673_169_1392 384
212 3300044712 Ga0453684_0000005 Ga0453684_0000005_1096435_1097658 384
213 3300044712 Ga0453684_0000102 Ga0453684_0000102_5608_6831 384
214 3300044712 Ga0453684_0005277 Ga0453684_0005277_6912_8135 384
215 3300044712 Ga0453684_0021720 Ga0453684_0021720_2657_3973 384
216 3300045051 Ga0451576_0000418 Ga0451576_0000418_90284_91507 384
217 3300045051 Ga0451576_0012255 Ga0451576_0012255_5995_7317 384
218 3300045051 Ga0451576_0055742 Ga0451576_0055742_1867_3060 384
219 3300045051 Ga0451576_0429216 Ga0451576_0429216_53_1252 384
220 3300053177 Ga0500636_0000541 Ga0500636_0000541_11601_12845 384
221 3300003203 JGI25406J46586_10020295 JGI25406J46586_100202951 385
222 3300005330 Ga0070690_100053210 Ga0070690_1000532102 385
223 3300005343 Ga0070687_100015970 Ga0070687_1000159703 385
224 3300005535 Ga0070684_100023015 Ga0070684_1000230155 385
225 3300005985 Ga0081539_10000178 Ga0081539_1000017878 385
226 3300006237 Ga0097621_100079347 Ga0097621_1000793473 385
227 3300006846 Ga0075430_100007215 Ga0075430_1000072152 385
228 3300025918 Ga0207662_10003207 Ga0207662_100032073 385
229 3300026035 Ga0207703_10149369 Ga0207703_101493692 385
230 3300031344 Ga0265316_10115141 Ga0265316_101151412 385
231 3300035398 Ga0316574_0050357 Ga0316574_0050357_100_1449 385
232 3300042876 Ga0451577_0162845 Ga0451577_0162845_276_1484 385
233 3300044712 Ga0453684_0000195 Ga0453684_0000195_166797_168005 385
234 3300045051 Ga0451576_0000386 Ga0451576_0000386_7087_8331 385
235 3300045051 Ga0451576_0064649 Ga0451576_0064649_309_1517 385
236 3300045051 Ga0451576_0181521 Ga0451576_0181521_933_2138 385
237 3300050509 nmdc:mga0qj67_82668_c1 nmdc:mga0qj67_82668_c1_1163_2332 385

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF24125

340

447

0.97

PF03734

YkuD

L,D-transpeptidase catalytic domain

187

322

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
1elw-assembly1.cif.gz_A crystal structure of the tpr1 domain of hop in complex with a hsc70 peptide 0.9675 18 65
4gyw-assembly2.cif.gz_A crystal structure of human o-glcnac transferase in complex with udp and a glycopeptide 0.9573 18 66
5hgv-assembly1.cif.gz_A structure of an o-glcnac transferase point mutant, d554n in complex with peptide 0.9546 18 66
4j8e-assembly1.cif.gz_A middle domain of hsc70-interacting protein, crystal form i 0.9536 18 65
1elw-assembly2.cif.gz_B crystal structure of the tpr1 domain of hop in complex with a hsc70 peptide 0.9534 18 66
ID Description Score Start End Superfamily
af_D4A8B1_169_244_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9857 21 66 1.25.40.10
af_Q2FYH2_121_279_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9837 16 66 1.25.40.10
af_Q96RK4_170_243_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9836 21 66 1.25.40.10
af_D4A333_877_1056_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9832 17 66 1.25.40.10
af_Q8C1Z7_170_242_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9826 21 66 1.25.40.10
ID Description Score Start End GO Terms
AF-A0A1I2H5A4-F1-model_v4 Murein L,D-transpeptidase YafK 0.9853 107 381 GO:0004180
GO:0008360
GO:0009252
GO:0016740
GO:0071555
AF-A0A2N2R422-F1-model_v4 L,D-TPase catalytic domain-containing protein 0.9847 16 381 GO:0004180
GO:0008360
GO:0009252
GO:0016740
GO:0071555
AF-A0A5C1E6K1-F1-model_v4 L,D-TPase catalytic domain-containing protein 0.9835 16 381 GO:0004180
GO:0008360
GO:0009252
GO:0016740
GO:0071555
AF-A0A1F4AIA5-F1-model_v4 L,D-TPase catalytic domain-containing protein 0.9824 14 381 GO:0004180
GO:0008360
GO:0009252
GO:0016740
GO:0071555
AF-A0A2N2REZ0-F1-model_v4 L,D-TPase catalytic domain-containing protein 0.982 22 381 GO:0004180
GO:0008360
GO:0009252
GO:0016740
GO:0071555

Feature Viewer

pLDDT pTM Quality
88.46 0.85 High
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Predicted Structure (AlphaFold2)

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