F349481

General Info

Members Datasets Scaffolds Average Seq Length
236 169 228 309

Family's Representative Sequence

Representative Sequence 3300049591|Ga0501075_0086660|Ga0501075_0086660_598_1611
Length 337
Sequence MPAPTERAAPALAADATPDAWPRVAVMGAGAVGCYFGGMLARAGAPVALIGRPRHVDAIAAAGLAMDSIHFQEHVRTDASVDAAAAQGARVVLFCVKTVHTESAARALAPHLAPDAIIVSLQNGVDNTQRIRAAAGIDALPAVVYVAAEMVAPGTVRHTGRGDLIVGALHPEARADHAVQAVVSLFTRAGVPCIRSNHVEADLWTKLVMNCAYNAISALGGQRYGVVARNPWSREVVRDAIIETVAVAGAAGVQLPADLVETGLRLGETMASALSSTAQDIALGRPTEIDSLNGWVARRGQELGVPTPVNRTLHALVKLLEQRTAPADRDPLVTARS

Samples

Sample ID Description Type Environment
1 2513237166 Paraburkholderia azotifigens UYPR1.413 Isolate Nodule
2 2562617112 Burkholderia sp. BT03 Isolate Rhizosphere
3 2711768613 Burkholderia sp. BT03 Isolate Rhizosphere
4 2808606384 Burkholderia sp. SJZ089 Isolate Rhizosphere
5 2808606390 Burkholderia sp. SJZ115 Isolate Rhizosphere
6 2808606391 Burkholderia sp. SJZ091 Isolate Rhizosphere
7 2921643360 Paraburkholderia steynii HC1.1ba Isolate Nodule
8 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
9 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
10 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
11 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
12 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
13 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
14 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
15 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
19 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
20 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
21 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
29 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
30 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
31 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
32 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
33 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
34 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
42 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
43 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
44 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
50 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
51 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
52 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
53 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
54 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
55 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
56 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
57 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
68 3300030879 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
69 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
70 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
71 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
72 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
73 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
74 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
75 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
76 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
77 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
78 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
79 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
80 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
81 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
82 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
83 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
84 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
85 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
86 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
87 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
88 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
89 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
90 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
91 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
92 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
93 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
94 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
95 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
96 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
97 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
98 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
99 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
100 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
101 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
102 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
103 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
104 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
105 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
106 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
107 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
108 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
109 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
110 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
111 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
112 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
113 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
114 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
115 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
116 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
117 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
118 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
119 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
120 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
121 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
122 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
123 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
124 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
125 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
126 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
127 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
128 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
129 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
130 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
131 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
132 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
133 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
134 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
135 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
136 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
137 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
138 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
139 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
140 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
141 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
142 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
143 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
144 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
145 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
146 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
147 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
148 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
149 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
150 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
151 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
152 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
153 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
154 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
155 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
156 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
157 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
158 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
159 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
160 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
161 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
162 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
163 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
164 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
165 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
166 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
167 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
168 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
169 8055301274 Paraburkholderia kirstenboschensis LMG 28727 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 95.76
Metatranscriptomes 0.85
Isolates 3.39

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.32
Nodule 1.27
Rhizoplane 3.81
Rhizosphere 82.2
Stem 0
Stem Tuber 0
Unclassified 3.39

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10217940 3300003320 Bacteria 2184
2 rootL2_10009158 3300003322 Bacteria 12670
3 JGI25160J50197_1000037 3300003354 Bacteria 162757
4 Ga0055526_1000175 3300003771 Bacteria 56970
5 Ga0065165_1000668 3300005262 Bacteria 49417
6 Ga0070683_100157786 3300005329 Bacteria 2152
7 Ga0070670_100001404 3300005331 Bacteria 19335
8 Ga0070680_100166557 3300005336 Bacteria 1853
9 Ga0070674_100063703 3300005356 Bacteria 2581
10 Ga0070673_100284143 3300005364 Bacteria 1452
11 Ga0070709_10032895 3300005434 Bacteria 3132
12 Ga0070714_100080418 3300005435 Bacteria 2836
13 Ga0070713_100092404 3300005436 Bacteria 2605
14 Ga0070663_100001123 3300005455 Bacteria 14739
15 Ga0070681_10299524 3300005458 Bacteria 1518
16 Ga0070681_10368751 3300005458 Unclassified 1346
17 Ga0070707_100141319 3300005468 Bacteria 2343
18 Ga0070707_100344819 3300005468 Bacteria 1447
19 Ga0070699_100136372 3300005518 Bacteria 2165
20 Ga0070679_100182443 3300005530 Bacteria 2071
21 Ga0070684_100157305 3300005535 Bacteria 2061
22 Ga0070664_100090115 3300005564 Bacteria 2654
23 Ga0070717_10008727 3300006028 Bacteria 7582
24 Ga0070717_10096525 3300006028 Bacteria 2504
25 Ga0075365_10049840 3300006038 Bacteria 2760
26 Ga0075368_10013866 3300006042 Bacteria 2966
27 Ga0075363_100071609 3300006048 Bacteria 1884
28 Ga0075363_100187625 3300006048 Bacteria 1178
29 Ga0070715_10029279 3300006163 Bacteria 2217
30 Ga0075367_10135030 3300006178 Bacteria 1526
31 Ga0075366_10150889 3300006195 Bacteria 1407
32 Ga0097621_100170495 3300006237 Bacteria 1876
33 Ga0075370_10112377 3300006353 Bacteria 1582
34 Ga0075428_100434461 3300006844 Unclassified 1406
35 Ga0075431_100033359 3300006847 Bacteria 5306
36 Ga0075431_100185192 3300006847 Bacteria 2135
37 Ga0075433_10150549 3300006852 Unclassified 2070
38 Ga0075434_100118170 3300006871 Bacteria 2665
39 Ga0075434_100405785 3300006871 Bacteria 1384
40 Ga0075429_100124558 3300006880 Bacteria 2253
41 Ga0075436_100004157 3300006914 Bacteria 9928
42 Ga0075436_100011795 3300006914 Bacteria 5996
43 Ga0075435_100125017 3300007076 Bacteria 2149
44 Ga0075435_100440173 3300007076 Bacteria 1124
45 Ga0099795_10011513 3300007788 Bacteria 2647
46 Ga0105240_10041809 3300009093 Bacteria 5846
47 Ga0111539_10168448 3300009094 Unclassified 2560
48 Ga0111539_10320034 3300009094 Bacteria 1805
49 Ga0105245_10438898 3300009098 Bacteria 1312
50 Ga0114129_10000777 3300009147 Bacteria 40773
51 Ga0114129_10190878 3300009147 Unclassified 2782
52 Ga0114129_10278982 3300009147 Bacteria 2233
53 Ga0114129_10589169 3300009147 Unclassified 1442
54 Ga0105243_10076432 3300009148 Bacteria 2721
55 Ga0105237_10404814 3300009545 Unclassified 1369
56 Ga0105238_10237140 3300009551 Bacteria 1801
57 Ga0105238_10437356 3300009551 Bacteria 1304
58 Ga0099796_10000248 3300010159 Bacteria 8547
59 Ga0163162_10000496 3300013306 Bacteria 36591
60 Ga0163162_10571795 3300013306 Bacteria 1257
61 Ga0228598_1000294 3300024227 Bacteria 9696
62 Ga0209564_1000145 3300025295 Bacteria 175251
63 Ga0209564_1010886 3300025295 Bacteria 4138
64 Ga0207426_1000004 3300025302 Bacteria 1047900
65 Ga0207685_10064151 3300025905 Bacteria 1466
66 Ga0207707_10229355 3300025912 Unclassified 1616
67 Ga0207695_10010215 3300025913 Bacteria 11513
68 Ga0207693_10155047 3300025915 Bacteria 1801
69 Ga0207650_10049738 3300025925 Bacteria 3097
70 Ga0207644_10197098 3300025931 Bacteria 1587
71 Ga0207661_10090969 3300025944 Bacteria 2542
72 Ga0207679_10095427 3300025945 Bacteria 2312
73 Ga0207678_10005728 3300026067 Bacteria 11089
74 Ga0209179_1004973 3300027512 Bacteria 2048
75 Ga0265338_10001292 3300028800 Bacteria 41039
76 Ga0265765_1007733 3300030879 Unclassified 1162
77 Ga0265760_10004880 3300031090 Bacteria 3840
78 Ga0265339_10022552 3300031249 Bacteria 3648
79 Ga0373959_0045519 3300034820 Bacteria 933
80 Ga0373926_0118988 3300035083 Bacteria 995
81 Ga0373934_0092877 3300035086 Bacteria 1217
82 Ga0373923_0015507 3300035111 Bacteria 2878
83 Ga0373936_0032377 3300035113 Bacteria 2068
84 Ga0373945_0003615 3300035116 Bacteria 4871
85 Ga0373954_0000751 3300035118 Bacteria 12539
86 Ga0373954_0007416 3300035118 Bacteria 4800
87 Ga0373954_0044085 3300035118 Bacteria 2081
88 Ga0373954_0160918 3300035118 Bacteria 1098
89 Ga0373957_0001946 3300035120 Bacteria 5751
90 Ga0373946_0001635 3300035171 Bacteria 7815
91 Ga0373955_0002056 3300035172 Bacteria 8665
92 Ga0373955_0138154 3300035172 Unclassified 1427
93 Ga0373955_0377046 3300035172 Unclassified 861
94 Ga0373935_0000086 3300035692 Bacteria 40589
95 Ga0373935_0099948 3300035692 Bacteria 1911
96 Ga0373927_0002359 3300035695 Bacteria 13770
97 Ga0373933_0002881 3300035724 Bacteria 9616
98 Ga0373947_0000096 3300035725 Bacteria 44841
99 Ga0373937_0000198 3300036401 Bacteria 59112
100 Ga0373937_0136892 3300036401 Bacteria 2290
101 Ga0373937_0242178 3300036401 Unclassified 1699
102 Ga0373925_0000071 3300037068 Bacteria 106825
103 Ga0373925_0051706 3300037068 Bacteria 3068
104 Ga0395905_0000020 3300037471 Bacteria 337672
105 Ga0439453_0001293 3300041408 Bacteria 3177
106 Ga0439449_0018173 3300042007 Bacteria 2638
107 Ga0466963_0066610 3300044694 Bacteria 2416
108 Ga0466967_0190646 3300045976 Bacteria 1937
109 Ga0495592_0000117 3300046454 Bacteria 69975
110 Ga0495592_0030853 3300046454 Bacteria 4054
111 Ga0495603_0000363 3300046455 Bacteria 24523
112 Ga0495590_0003293 3300046457 Bacteria 6612
113 Ga0495651_0000370 3300046462 Bacteria 34672
114 Ga0495651_0149626 3300046462 Bacteria 1684
115 Ga0495653_0000047 3300046463 Bacteria 111093
116 Ga0495653_0100329 3300046463 Bacteria 2099
117 Ga0495580_0000009 3300046472 Bacteria 101827
118 Ga0495580_0321862 3300046472 Unclassified 1051
119 Ga0495582_0035212 3300046473 Bacteria 2753
120 Ga0495605_0009013 3300046474 Bacteria 5616
121 Ga0495662_0007960 3300046476 Bacteria 5220
122 Ga0495662_0015987 3300046476 Bacteria 3640
123 Ga0495664_0000024 3300046477 Bacteria 126593
124 Ga0495664_0000765 3300046477 Bacteria 16473
125 Ga0495583_0008613 3300046506 Bacteria 6208
126 Ga0495606_0024361 3300046507 Bacteria 4362
127 Ga0495608_0000004 3300046511 Bacteria 355027
128 Ga0495608_0067667 3300046511 Bacteria 2336
129 Ga0495618_0000036 3300046514 Bacteria 101535
130 Ga0495628_0000006 3300046516 Bacteria 306606
131 Ga0495628_0026481 3300046516 Bacteria 4727
132 Ga0495630_0000647 3300046517 Bacteria 25227
133 Ga0495630_0011116 3300046517 Bacteria 6515
134 Ga0495648_0083236 3300046524 Bacteria 1813
135 Ga0495652_0000038 3300046529 Bacteria 129311
136 Ga0495652_0006207 3300046529 Bacteria 11149
137 Ga0495640_0000001 3300046533 Bacteria 853827
138 Ga0495640_0032550 3300046533 Bacteria 3713
139 Ga0495586_0074428 3300046535 Bacteria 1859
140 Ga0495587_0000004 3300046536 Bacteria 358433
141 Ga0495597_0093268 3300046542 Bacteria 1276
142 Ga0495645_0000001 3300046543 Bacteria 657910
143 Ga0495645_0001247 3300046543 Bacteria 17333
144 Ga0495667_0000093 3300046559 Bacteria 65066
145 Ga0495667_0079728 3300046559 Bacteria 2128
146 Ga0495634_0000133 3300046642 Bacteria 64326
147 Ga0495634_0127828 3300046642 Bacteria 1622
148 Ga0495635_0000003 3300046663 Bacteria 390055
149 Ga0495657_0000143 3300046675 Bacteria 64334
150 Ga0495599_0000012 3300046678 Bacteria 181156
151 Ga0495599_0001366 3300046678 Bacteria 13942
152 Ga0495599_0281763 3300046678 Bacteria 1007
153 Ga0495623_0000015 3300046679 Bacteria 117329
154 Ga0495623_0019825 3300046679 Bacteria 4347
155 Ga0495646_0000005 3300046680 Bacteria 266899
156 Ga0495646_0044182 3300046680 Bacteria 2725
157 Ga0495613_0069757 3300046689 Bacteria 2562
158 Ga0495600_0000051 3300046809 Bacteria 69572
159 Ga0495600_0168664 3300046809 Bacteria 1413
160 Ga0495581_0010700 3300047315 Bacteria 5306
161 Ga0495604_0000002 3300047317 Bacteria 530904
162 Ga0495604_0041089 3300047317 Bacteria 3628
163 Ga0495674_0000004 3300047319 Bacteria 531855
164 Ga0495674_0073323 3300047319 Bacteria 2951
165 Ga0495680_0000142 3300047322 Bacteria 72324
166 Ga0495680_0024759 3300047322 Bacteria 4974
167 Ga0495680_0098120 3300047322 Bacteria 2186
168 Ga0495683_0005454 3300047323 Bacteria 7057
169 Ga0495683_0021775 3300047323 Bacteria 3301
170 Ga0495687_016497 3300047443 Bacteria 3713
171 Ga0495687_099129 3300047443 Bacteria 1097
172 Ga0495675_0000824 3300047444 Bacteria 19028
173 Ga0495675_0096345 3300047444 Bacteria 1855
174 Ga0495673_0029212 3300047469 Bacteria 2604
175 Ga0495684_0000004 3300047471 Bacteria 307093
176 Ga0495684_0136313 3300047471 Bacteria 1842
177 Ga0495593_0001806 3300047673 Bacteria 12722
178 Ga0495602_0000001 3300048088 Bacteria 510904
179 Ga0495602_0138114 3300048088 Bacteria 1933
180 Ga0495602_0250728 3300048088 Bacteria 1319
181 Ga0495626_0031253 3300048091 Bacteria 2564
182 Ga0496100_0000070 3300048903 Bacteria 56600
183 Ga0496100_0330185 3300048903 Bacteria 1148
184 Ga0496101_0000044 3300048904 Bacteria 161295
185 Ga0496102_0000715 3300048905 Bacteria 32824
186 Ga0496103_0000213 3300048906 Bacteria 58012
187 Ga0496104_0177762 3300048907 Bacteria 2038
188 Ga0496105_0115579 3300048908 Bacteria 2213
189 Ga0496105_0133273 3300048908 Bacteria 2047
190 Ga0496112_0013267 3300048915 Bacteria 7607
191 Ga0496117_0000098 3300048920 Bacteria 196331
192 Ga0496118_0000625 3300048921 Bacteria 58119
193 Ga0496119_0024142 3300048922 Bacteria 4286
194 Ga0496119_0055066 3300048922 Bacteria 2418
195 Ga0496121_0000644 3300048924 Bacteria 65162
196 Ga0496121_0011697 3300048924 Bacteria 9689
197 Ga0495682_0019835 3300049460 Bacteria 2525
198 Ga0501075_0086660 3300049591 Bacteria 2373
199 nmdc:mga03683_61654_c1 3300050489 Unclassified 1587
200 nmdc:mga03n38_85265_c1 3300050490 Bacteria 1493
201 nmdc:mga06z11_58055_c1 3300050494 Bacteria 2007
202 nmdc:mga04h51_48288_c1 3300050495 Bacteria 1418
203 nmdc:mga04h51_82643_c1 3300050495 Bacteria 1143
204 nmdc:mga07m45_61169_c1 3300050496 Bacteria 2133
205 nmdc:mga05p37_126677_c1 3300050507 Bacteria 3136
206 nmdc:mga05p37_39426_c1 3300050507 Bacteria 5800
207 nmdc:mga05p37_9358_c1 3300050507 Bacteria 11594
208 nmdc:mga09592_112447_c1 3300050508 Bacteria 2336
209 nmdc:mga06r32_22074_c1 3300050510 Unclassified 3787
210 nmdc:mga06r32_31958_c1 3300050510 Bacteria 4947
211 nmdc:mga06r32_348258_c1 3300050510 Bacteria 1466
212 nmdc:mga0n895_392529_c1 3300050512 Bacteria 1404
213 nmdc:mga0n895_57311_c1 3300050512 Unclassified 3840
214 nmdc:mga0rr50_108525_c1 3300050513 Bacteria 2193
215 nmdc:mga0rr50_305094_c1 3300050513 Bacteria 1332
216 nmdc:mga08x19_1955_c1 3300050514 Bacteria 11416
217 nmdc:mga08x19_275110_c1 3300050514 Bacteria 1166
218 nmdc:mga08x19_9445_c1 3300050514 Bacteria 5840
219 nmdc:mga0sz30_41184_c1 3300050516 Bacteria 1942
220 Ga0495601_0000026 3300053077 Bacteria 126257
221 Ga0495601_0187056 3300053077 Bacteria 1354
222 Ga0495612_0000005 3300053078 Bacteria 286943
223 Ga0495595_0000058 3300053084 Bacteria 57705
224 Ga0495619_0000003 3300053085 Bacteria 515784
225 Ga0500641_0009088 3300053096 Bacteria 3564
226 Ga0500616_0070327 3300053153 Bacteria 1787
227 Ga0501084_0412609 3300054114 Unclassified 1141
228 Ga0501082_0233875 3300060353 Bacteria 1599

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300036401 Ga0373937_0136892 Ga0373937_0136892_1474_2265 248
2 3300035172 Ga0373955_0377046 Ga0373955_0377046_13_846 270
3 3300034820 Ga0373959_0045519 Ga0373959_0045519_64_897 275
4 3300054114 Ga0501084_0412609 Ga0501084_0412609_12_860 275
5 3300009551 Ga0105238_10437356 Ga0105238_104373562 277
6 3300035120 Ga0373957_0001946 Ga0373957_0001946_179_1063 277
7 3300047322 Ga0495680_0098120 Ga0495680_0098120_49_882 277
8 3300006847 Ga0075431_100033359 Ga0075431_1000333596 281
9 3300050510 nmdc:mga06r32_31958_c1 nmdc:mga06r32_31958_c1_3779_4675 281
10 3300035083 Ga0373926_0118988 Ga0373926_0118988_23_910 284
11 3300006852 Ga0075433_10150549 Ga0075433_101505492 285
12 3300009094 Ga0111539_10168448 Ga0111539_101684482 285
13 3300009147 Ga0114129_10000777 Ga0114129_1000077711 285
14 3300050507 nmdc:mga05p37_9358_c1 nmdc:mga05p37_9358_c1_7244_8164 285
15 3300050512 nmdc:mga0n895_57311_c1 nmdc:mga0n895_57311_c1_1912_2832 285
16 3300035118 Ga0373954_0160918 Ga0373954_0160918_130_1014 287
17 3300046454 Ga0495592_0030853 Ga0495592_0030853_720_1604 287
18 3300046462 Ga0495651_0149626 Ga0495651_0149626_61_945 287
19 3300046463 Ga0495653_0100329 Ga0495653_0100329_1152_2036 287
20 3300046476 Ga0495662_0015987 Ga0495662_0015987_1870_2754 287
21 3300046477 Ga0495664_0000765 Ga0495664_0000765_11132_12016 287
22 3300046511 Ga0495608_0067667 Ga0495608_0067667_605_1489 287
23 3300046516 Ga0495628_0026481 Ga0495628_0026481_2899_3783 287
24 3300046517 Ga0495630_0011116 Ga0495630_0011116_3458_4342 287
25 3300046529 Ga0495652_0006207 Ga0495652_0006207_4861_5745 287
26 3300046533 Ga0495640_0032550 Ga0495640_0032550_2225_3109 287
27 3300046535 Ga0495586_0074428 Ga0495586_0074428_253_1137 287
28 3300046543 Ga0495645_0001247 Ga0495645_0001247_10781_11665 287
29 3300046559 Ga0495667_0079728 Ga0495667_0079728_899_1783 287
30 3300046642 Ga0495634_0127828 Ga0495634_0127828_627_1511 287
31 3300046678 Ga0495599_0001366 Ga0495599_0001366_2924_3808 287
32 3300046679 Ga0495623_0019825 Ga0495623_0019825_2813_3697 287
33 3300046680 Ga0495646_0044182 Ga0495646_0044182_142_1026 287
34 3300046809 Ga0495600_0168664 Ga0495600_0168664_346_1230 287
35 3300047317 Ga0495604_0041089 Ga0495604_0041089_1922_2806 287
36 3300047322 Ga0495680_0024759 Ga0495680_0024759_664_1548 287
37 3300047444 Ga0495675_0096345 Ga0495675_0096345_594_1478 287
38 3300048088 Ga0495602_0138114 Ga0495602_0138114_566_1450 287
39 3300053077 Ga0495601_0187056 Ga0495601_0187056_182_1066 287
40 3300035692 Ga0373935_0099948 Ga0373935_0099948_380_1288 291
41 3300009545 Ga0105237_10404814 Ga0105237_104048142 292
42 3300025913 Ga0207695_10010215 Ga0207695_100102152 292
43 3300006871 Ga0075434_100405785 Ga0075434_1004057851 293
44 3300009094 Ga0111539_10320034 Ga0111539_103200344 293
45 3300046472 Ga0495580_0321862 Ga0495580_0321862_96_995 293
46 3300046678 Ga0495599_0281763 Ga0495599_0281763_50_976 293
47 3300050512 nmdc:mga0n895_392529_c1 nmdc:mga0n895_392529_c1_43_939 293
48 3300005329 Ga0070683_100157786 Ga0070683_1001577863 294
49 3300005331 Ga0070670_100001404 Ga0070670_10000140410 294
50 3300005535 Ga0070684_100157305 Ga0070684_1001573053 294
51 3300005564 Ga0070664_100090115 Ga0070664_1000901154 294
52 3300009093 Ga0105240_10041809 Ga0105240_100418093 294
53 3300025925 Ga0207650_10049738 Ga0207650_100497383 294
54 3300025931 Ga0207644_10197098 Ga0207644_101970982 294
55 3300025944 Ga0207661_10090969 Ga0207661_100909693 294
56 3300025945 Ga0207679_10095427 Ga0207679_100954273 294
57 3300035118 Ga0373954_0044085 Ga0373954_0044085_19_942 295
58 3300005356 Ga0070674_100063703 Ga0070674_1000637034 296
59 3300005364 Ga0070673_100284143 Ga0070673_1002841432 296
60 3300009098 Ga0105245_10438898 Ga0105245_104388982 296
61 3300009148 Ga0105243_10076432 Ga0105243_100764324 296
62 3300013306 Ga0163162_10571795 Ga0163162_105717951 296
63 3300047471 Ga0495684_0136313 Ga0495684_0136313_456_1436 296
64 3300048903 Ga0496100_0330185 Ga0496100_0330185_73_1014 296
65 3300005468 Ga0070707_100344819 Ga0070707_1003448192 297
66 3300006178 Ga0075367_10135030 Ga0075367_101350302 297
67 3300009147 Ga0114129_10589169 Ga0114129_105891692 297
68 3300006163 Ga0070715_10029279 Ga0070715_100292792 298
69 3300007788 Ga0099795_10011513 Ga0099795_100115134 298
70 3300025905 Ga0207685_10064151 Ga0207685_100641511 298
71 3300031249 Ga0265339_10022552 Ga0265339_100225522 298
72 3300035118 Ga0373954_0007416 Ga0373954_0007416_3213_4181 298
73 3300035172 Ga0373955_0138154 Ga0373955_0138154_61_993 298
74 3300036401 Ga0373937_0242178 Ga0373937_0242178_460_1392 298
75 3300037068 Ga0373925_0051706 Ga0373925_0051706_774_1721 298
76 3300005336 Ga0070680_100166557 Ga0070680_1001665571 299
77 3300005455 Ga0070663_100001123 Ga0070663_10000112313 299
78 3300005458 Ga0070681_10299524 Ga0070681_102995242 299
79 3300007076 Ga0075435_100440173 Ga0075435_1004401732 299
80 3300024227 Ga0228598_1000294 Ga0228598_10002946 299
81 3300030879 Ga0265765_1007733 Ga0265765_10077331 299
82 3300031090 Ga0265760_10004880 Ga0265760_100048802 299
83 3300042007 Ga0439449_0018173 Ga0439449_0018173_73_1038 299
84 3300044694 Ga0466963_0066610 Ga0466963_0066610_1300_2250 299
85 3300045976 Ga0466967_0190646 Ga0466967_0190646_486_1436 299
86 iso_pu_bacteria 8055301274 8055303241 299
87 3300003771 Ga0055526_1000175 Ga0055526_100017550 300
88 3300025295 Ga0209564_1000145 Ga0209564_1000145158 300
89 3300053153 Ga0500616_0070327 Ga0500616_0070327_788_1723 300
90 3300005468 Ga0070707_100141319 Ga0070707_1001413193 301
91 3300006028 Ga0070717_10096525 Ga0070717_100965252 301
92 3300006038 Ga0075365_10049840 Ga0075365_100498403 301
93 3300006048 Ga0075363_100187625 Ga0075363_1001876251 301
94 3300006195 Ga0075366_10150889 Ga0075366_101508891 301
95 3300006353 Ga0075370_10112377 Ga0075370_101123772 301
96 3300006914 Ga0075436_100004157 Ga0075436_10000415710 301
97 3300010159 Ga0099796_10000248 Ga0099796_100002487 301
98 3300025915 Ga0207693_10155047 Ga0207693_101550473 301
99 3300027512 Ga0209179_1004973 Ga0209179_10049732 301
100 3300035086 Ga0373934_0092877 Ga0373934_0092877_85_1041 301
101 3300035111 Ga0373923_0015507 Ga0373923_0015507_729_1685 301
102 3300035113 Ga0373936_0032377 Ga0373936_0032377_947_1897 301
103 3300035116 Ga0373945_0003615 Ga0373945_0003615_3747_4703 301
104 3300035118 Ga0373954_0000751 Ga0373954_0000751_4405_5361 301
105 3300035171 Ga0373946_0001635 Ga0373946_0001635_6013_6969 301
106 3300035172 Ga0373955_0002056 Ga0373955_0002056_5984_6940 301
107 3300035692 Ga0373935_0000086 Ga0373935_0000086_30775_31731 301
108 3300035695 Ga0373927_0002359 Ga0373927_0002359_556_1512 301
109 3300035724 Ga0373933_0002881 Ga0373933_0002881_6698_7654 301
110 3300035725 Ga0373947_0000096 Ga0373947_0000096_25550_26506 301
111 3300036401 Ga0373937_0000198 Ga0373937_0000198_34549_35505 301
112 3300037068 Ga0373925_0000071 Ga0373925_0000071_25851_26807 301
113 3300046454 Ga0495592_0000117 Ga0495592_0000117_30393_31349 301
114 3300046462 Ga0495651_0000370 Ga0495651_0000370_13592_14548 301
115 3300046463 Ga0495653_0000047 Ga0495653_0000047_74070_75026 301
116 3300046473 Ga0495582_0035212 Ga0495582_0035212_384_1340 301
117 3300046476 Ga0495662_0007960 Ga0495662_0007960_509_1465 301
118 3300046477 Ga0495664_0000024 Ga0495664_0000024_44917_45873 301
119 3300046511 Ga0495608_0000004 Ga0495608_0000004_97153_98109 301
120 3300046514 Ga0495618_0000036 Ga0495618_0000036_47963_48919 301
121 3300046516 Ga0495628_0000006 Ga0495628_0000006_52624_53580 301
122 3300046517 Ga0495630_0000647 Ga0495630_0000647_14509_15465 301
123 3300046529 Ga0495652_0000038 Ga0495652_0000038_47635_48591 301
124 3300046533 Ga0495640_0000001 Ga0495640_0000001_45540_46496 301
125 3300046536 Ga0495587_0000004 Ga0495587_0000004_100618_101574 301
126 3300046543 Ga0495645_0000001 Ga0495645_0000001_257007_257963 301
127 3300046559 Ga0495667_0000093 Ga0495667_0000093_38753_39709 301
128 3300046642 Ga0495634_0000133 Ga0495634_0000133_30383_31339 301
129 3300046663 Ga0495635_0000003 Ga0495635_0000003_256638_257594 301
130 3300046675 Ga0495657_0000143 Ga0495657_0000143_30350_31306 301
131 3300046678 Ga0495599_0000012 Ga0495599_0000012_40632_41588 301
132 3300046679 Ga0495623_0000015 Ga0495623_0000015_77695_78651 301
133 3300046680 Ga0495646_0000005 Ga0495646_0000005_169178_170134 301
134 3300046689 Ga0495613_0069757 Ga0495613_0069757_639_1595 301
135 3300046809 Ga0495600_0000051 Ga0495600_0000051_33528_34484 301
136 3300047315 Ga0495581_0010700 Ga0495581_0010700_2444_3400 301
137 3300047317 Ga0495604_0000002 Ga0495604_0000002_273055_274011 301
138 3300047319 Ga0495674_0000004 Ga0495674_0000004_272604_273560 301
139 3300047322 Ga0495680_0000142 Ga0495680_0000142_61055_62011 301
140 3300047444 Ga0495675_0000824 Ga0495675_0000824_7195_8151 301
141 3300047471 Ga0495684_0000004 Ga0495684_0000004_253480_254436 301
142 3300047673 Ga0495593_0001806 Ga0495593_0001806_7040_7996 301
143 3300048088 Ga0495602_0000001 Ga0495602_0000001_256680_257636 301
144 3300050489 nmdc:mga03683_61654_c1 nmdc:mga03683_61654_c1_516_1454 301
145 3300050494 nmdc:mga06z11_58055_c1 nmdc:mga06z11_58055_c1_68_1006 301
146 3300050495 nmdc:mga04h51_48288_c1 nmdc:mga04h51_48288_c1_66_1004 301
147 3300050496 nmdc:mga07m45_61169_c1 nmdc:mga07m45_61169_c1_1165_2103 301
148 3300050514 nmdc:mga08x19_1955_c1 nmdc:mga08x19_1955_c1_2648_3598 301
149 3300050516 nmdc:mga0sz30_41184_c1 nmdc:mga0sz30_41184_c1_781_1719 301
150 3300053077 Ga0495601_0000026 Ga0495601_0000026_44709_45665 301
151 3300053078 Ga0495612_0000005 Ga0495612_0000005_32961_33917 301
152 3300053084 Ga0495595_0000058 Ga0495595_0000058_27172_28128 301
153 3300053085 Ga0495619_0000003 Ga0495619_0000003_261802_262758 301
154 3300053096 Ga0500641_0009088 Ga0500641_0009088_2376_3314 301
155 iso_pu_bacteria 2513237166 2514049300 301
156 3300006844 Ga0075428_100434461 Ga0075428_1004344612 302
157 3300006847 Ga0075431_100185192 Ga0075431_1001851923 302
158 3300006880 Ga0075429_100124558 Ga0075429_1001245582 302
159 3300009147 Ga0114129_10190878 Ga0114129_101908783 302
160 3300009147 Ga0114129_10278982 Ga0114129_102789823 302
161 3300041408 Ga0439453_0001293 Ga0439453_0001293_642_1595 302
162 3300050507 nmdc:mga05p37_126677_c1 nmdc:mga05p37_126677_c1_942_1865 302
163 3300050507 nmdc:mga05p37_39426_c1 nmdc:mga05p37_39426_c1_957_1880 302
164 3300050508 nmdc:mga09592_112447_c1 nmdc:mga09592_112447_c1_1277_2200 302
165 3300050510 nmdc:mga06r32_22074_c1 nmdc:mga06r32_22074_c1_225_1148 302
166 3300050510 nmdc:mga06r32_348258_c1 nmdc:mga06r32_348258_c1_492_1415 302
167 3300050513 nmdc:mga0rr50_305094_c1 nmdc:mga0rr50_305094_c1_196_1119 302
168 3300005530 Ga0070679_100182443 Ga0070679_1001824432 303
169 3300006237 Ga0097621_100170495 Ga0097621_1001704952 303
170 3300006871 Ga0075434_100118170 Ga0075434_1001181702 303
171 3300009551 Ga0105238_10237140 Ga0105238_102371402 303
172 3300046457 Ga0495590_0003293 Ga0495590_0003293_62_973 303
173 3300046507 Ga0495606_0024361 Ga0495606_0024361_2249_3160 303
174 3300046542 Ga0495597_0093268 Ga0495597_0093268_29_940 303
175 3300047323 Ga0495683_0005454 Ga0495683_0005454_3810_4721 303
176 3300047443 Ga0495687_016497 Ga0495687_016497_2245_3156 303
177 3300048088 Ga0495602_0250728 Ga0495602_0250728_145_1056 303
178 3300048091 Ga0495626_0031253 Ga0495626_0031253_1387_2298 303
179 3300028800 Ga0265338_10001292 Ga0265338_100012929 304
180 3300060353 Ga0501082_0233875 Ga0501082_0233875_654_1589 304
181 3300005435 Ga0070714_100080418 Ga0070714_1000804182 305
182 3300005518 Ga0070699_100136372 Ga0070699_1001363722 305
183 3300006042 Ga0075368_10013866 Ga0075368_100138662 305
184 3300006048 Ga0075363_100071609 Ga0075363_1000716092 305
185 3300006914 Ga0075436_100011795 Ga0075436_1000117953 305
186 3300007076 Ga0075435_100125017 Ga0075435_1001250173 305
187 3300050490 nmdc:mga03n38_85265_c1 nmdc:mga03n38_85265_c1_80_1030 305
188 3300050495 nmdc:mga04h51_82643_c1 nmdc:mga04h51_82643_c1_46_996 305
189 3300050513 nmdc:mga0rr50_108525_c1 nmdc:mga0rr50_108525_c1_1046_1996 305
190 3300050514 nmdc:mga08x19_9445_c1 nmdc:mga08x19_9445_c1_3652_4602 305
191 3300005458 Ga0070681_10368751 Ga0070681_103687512 306
192 3300013306 Ga0163162_10000496 Ga0163162_1000049620 306
193 3300025912 Ga0207707_10229355 Ga0207707_102293552 306
194 3300026067 Ga0207678_10005728 Ga0207678_100057285 306
195 3300050514 nmdc:mga08x19_275110_c1 nmdc:mga08x19_275110_c1_89_1036 306
196 3300005434 Ga0070709_10032895 Ga0070709_100328954 307
197 3300005436 Ga0070713_100092404 Ga0070713_1000924042 307
198 3300006028 Ga0070717_10008727 Ga0070717_100087275 307
199 iso_pu_bacteria 2808606384 2808974235 308
200 iso_pu_bacteria 2808606390 2809009021 308
201 iso_pu_bacteria 2808606391 2809016172 308
202 3300003354 JGI25160J50197_1000037 JGI25160J50197_100003789 309
203 3300005262 Ga0065165_1000668 Ga0065165_100066827 309
204 3300025302 Ga0207426_1000004 Ga0207426_1000004596 309
205 3300048903 Ga0496100_0000070 Ga0496100_0000070_30085_31014 309
206 3300048904 Ga0496101_0000044 Ga0496101_0000044_67705_68634 309
207 3300048905 Ga0496102_0000715 Ga0496102_0000715_4219_5148 309
208 3300048906 Ga0496103_0000213 Ga0496103_0000213_21349_22278 309
209 3300048908 Ga0496105_0115579 Ga0496105_0115579_1046_1975 309
210 3300048920 Ga0496117_0000098 Ga0496117_0000098_102741_103670 309
211 3300048921 Ga0496118_0000625 Ga0496118_0000625_37380_38309 309
212 3300048922 Ga0496119_0024142 Ga0496119_0024142_2702_3631 309
213 3300048924 Ga0496121_0000644 Ga0496121_0000644_5357_6286 309
214 3300049591 Ga0501075_0086660 Ga0501075_0086660_598_1611 309
215 3300037471 Ga0395905_0000020 Ga0395905_0000020_286565_287500 311
216 iso_pu_bacteria 2562617112 2563059780 311
217 iso_pu_bacteria 2711768613 2713480512 311
218 iso_pu_bacteria 2921643360 2921653770 311
219 3300003320 rootH2_10217940 rootH2_102179403 315
220 3300003322 rootL2_10009158 rootL2_1000915815 315
221 3300025295 Ga0209564_1010886 Ga0209564_10108862 315
222 3300046455 Ga0495603_0000363 Ga0495603_0000363_8680_9627 315
223 3300046472 Ga0495580_0000009 Ga0495580_0000009_94853_95800 315
224 3300046474 Ga0495605_0009013 Ga0495605_0009013_4104_5051 315
225 3300046506 Ga0495583_0008613 Ga0495583_0008613_724_1671 315
226 3300046524 Ga0495648_0083236 Ga0495648_0083236_683_1630 315
227 3300047319 Ga0495674_0073323 Ga0495674_0073323_916_1863 315
228 3300047323 Ga0495683_0021775 Ga0495683_0021775_1658_2605 315
229 3300047443 Ga0495687_099129 Ga0495687_099129_29_976 315
230 3300047469 Ga0495673_0029212 Ga0495673_0029212_169_1116 315
231 3300048907 Ga0496104_0177762 Ga0496104_0177762_173_1120 315
232 3300048908 Ga0496105_0133273 Ga0496105_0133273_945_1892 315
233 3300048915 Ga0496112_0013267 Ga0496112_0013267_4334_5281 315
234 3300048922 Ga0496119_0055066 Ga0496119_0055066_919_1866 315
235 3300048924 Ga0496121_0011697 Ga0496121_0011697_7588_8535 315
236 3300049460 Ga0495682_0019835 Ga0495682_0019835_963_1910 315

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08546

ApbA_C

Ketopantoate reductase PanE/ApbA C terminal

198

321

0.98

PF02558

ApbA

Ketopantoate reductase PanE/ApbA

24

171

0.97

PF01210

NAD_Gly3P_dh_N

NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus

23

145

0.88

PF03807

F420_oxidored

NADP oxidoreductase coenzyme F420-dependent

23

124

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
3hwr-assembly1.cif.gz_B crystal structure of pane/apba family ketopantoate reductase (yp_299159.1) from ralstonia eutropha jmp134 at 2.15 a resolution 0.9691 1 300
3hwr-assembly1.cif.gz_B crystal structure of pane/apba family ketopantoate reductase (yp_299159.1) from ralstonia eutropha jmp134 at 2.15 a resolution 0.9627 1 300
4j56-assembly2.cif.gz_C structure of plasmodium falciparum thioredoxin reductase-thioredoxin complex 0.9459 2 30
2vvl-assembly1.cif.gz_E the structure of mao-n-d3, a variant of monoamine oxidase from aspergillus niger. 0.9272 2 30
5x20-assembly1.cif.gz_B the ternary structure of d-mandelate dehydrogenase with nadh and anilino(oxo)acetate 0.9271 1 298
ID Description Score Start End Superfamily
3hwrB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9855 2 170 3.40.50.720
3hwrB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9796 2 170 3.40.50.720
af_Q6YUU2_65_406_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9503 2 29 3.50.50.60
1vg9E01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9343 2 30 3.50.50.60
af_Q54LH3_697_827_1.10.1040.10 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9342 173 297 1.10.1040.10
ID Description Score Start End GO Terms
AF-A0A2N2T6F5-F1-model_v4 Ketopantoate reductase N-terminal domain-containing protein 0.988 1 83
AF-A0A2M7Y092-F1-model_v4 2-dehydropantoate 2-reductase 0.9856 2 111 GO:0005737
GO:0008677
GO:0016020
GO:0050661
AF-A0A0S1Y8E4-F1-model_v4 2-dehydropantoate 2-reductase (EC 1.1.1.169) (Ketopantoate reductase) 0.9765 1 296 GO:0005737
GO:0008677
GO:0015940
GO:0050661
AF-A0A849KMX1-F1-model_v4 2-dehydropantoate 2-reductase (EC 1.1.1.169) (Ketopantoate reductase) 0.974 1 298 GO:0005737
GO:0008677
GO:0015940
AF-A9HCD6-F1-model_v4 2-dehydropantoate 2-reductase (EC 1.1.1.169) (Ketopantoate reductase) 0.9729 2 297 GO:0005737
GO:0008677
GO:0015940
GO:0016020
GO:0050661

Feature Viewer

pLDDT pTM Quality
93.18 0.88 High
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Predicted Structure (AlphaFold2)

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