F349378

General Info

Members Datasets Scaffolds Average Seq Length
236 132 472 605

Family's Representative Sequence

Representative Sequence 3300046535|Ga0495586_0013192|Ga0495586_0013192_632_2827
Length 694
Sequence VDILDSLNPEQRRAVESVRGPVCILAGAGSGKTTTITRRIAWQVVSRTFRADEILAVTFTDKAAGVMRSRLAALGAGGVEARTFHSAALGQLHRYAPGSVGRILPTKALLLRQIANALPPPYKFRPAGDLATEVERAKARRVRPDVYLASLDGHEPPIPANLMYTVYREYERRKSDRGEIDFEDVLELAIRLLETDDQARADLRRRYRAFTVDEYQDVNLLQQTLLDLWLGPRDDLCVVGDDYQSIYAFTGASPEWLLGVASRFPGAAVVRLEENYRSSPQVLELANRLVPNLGGAEKMLRATRADGPEPELRPFGSAEAEDAWLAGELRALRAAGVPFEETAILCRTNARRLLRQLEREGSSGVARRVRELALDAGWLEVLPDKLGERELTRQADLGRLVKLAAELDDGVMTGAEFATELRRRFDPGGAGGRGVHLLTYHRAKGLEFEAVFLPRLEDKELPSRLARTGEEQAEERRLLYVGLTRAKRWLAVTWSRRPSPFLAELGVAVSHASAQPRGERAPRNESPAAEALRRWRLERARADEVPPYVIFPDRTIDELLARRPASVAALAAIHGLGPARLSRFGDELFGVLSRVLAGEGVGSPAEGREQVAQVTSGAGDPMYDALATWRRRRASDEGVPPFHVFANRVLAAIAEAKPRSEAELLAVPGVGPAKLDRYGDEVLDLVAAGLGAAA

Samples

Sample ID Description Type Environment
1 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
9 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
10 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
11 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
12 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
17 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
18 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
19 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
20 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
21 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
22 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
23 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
24 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
25 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
26 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
27 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
28 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
34 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
35 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
36 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
37 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
38 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
39 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
57 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
58 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
59 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
60 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
61 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
62 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
63 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
64 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
65 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
66 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
67 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
68 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
69 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
70 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
71 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
72 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
73 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
74 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
75 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
76 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
77 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
78 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
79 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
80 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
81 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
82 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
83 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
84 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
85 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
86 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
87 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
88 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
89 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
90 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
91 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
92 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
93 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
94 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
95 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
96 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
97 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
98 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
99 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
100 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
101 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
102 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
103 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
104 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
105 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
106 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
107 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
108 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
109 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
110 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
111 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
112 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
113 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
114 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
115 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
116 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
117 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
118 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
119 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
120 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
121 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
122 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
123 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
124 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
125 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
126 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
127 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
128 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
129 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
130 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
131 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
132 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.58
Metatranscriptomes 0.42
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 12.29
Rhizosphere 86.86
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495586_0013192 3300046535 Bacteria 4381
2 Ga0070658_10052991 3300005327 Bacteria 3291
3 Ga0070683_100001132 3300005329 Bacteria 20179
4 Ga0070683_100009621 3300005329 Bacteria 8274
5 Ga0070683_100037757 3300005329 Bacteria 4423
6 Ga0070683_100040524 3300005329 Bacteria 4283
7 Ga0070680_100005468 3300005336 Bacteria 9614
8 Ga0070660_100000675 3300005339 Bacteria 22572
9 Ga0070660_100026697 3300005339 Bacteria 4302
10 Ga0070660_100036037 3300005339 Bacteria 3745
11 Ga0070659_100048033 3300005366 Bacteria 3351
12 Ga0070714_100053340 3300005435 Bacteria 3451
13 Ga0070681_10002916 3300005458 Bacteria 15836
14 Ga0070681_10007090 3300005458 Bacteria 10913
15 Ga0070681_10015530 3300005458 Bacteria 7584
16 Ga0070681_10128138 3300005458 Bacteria 2471
17 Ga0070698_100007579 3300005471 Bacteria 11741
18 Ga0070698_100060064 3300005471 Bacteria 3837
19 Ga0070679_100001630 3300005530 Bacteria 20209
20 Ga0070679_100010400 3300005530 Bacteria 8826
21 Ga0070679_100068043 3300005530 Bacteria 3552
22 Ga0070679_100142598 3300005530 Bacteria 2374
23 Ga0070684_100004414 3300005535 Bacteria 10705
24 Ga0070696_100022014 3300005546 Bacteria 4327
25 Ga0068855_100136873 3300005563 Bacteria 2794
26 Ga0068855_100207515 3300005563 Bacteria 2203
27 Ga0068857_100001406 3300005577 Bacteria 19005
28 Ga0068856_100073145 3300005614 Bacteria 3394
29 Ga0068856_100103596 3300005614 Bacteria 2839
30 Ga0068852_100056650 3300005616 Bacteria 3388
31 Ga0068864_100102168 3300005618 Bacteria 2544
32 Ga0068861_100025974 3300005719 Bacteria 4253
33 Ga0081455_10052410 3300005937 Bacteria 3493
34 Ga0081540_1011431 3300005983 Bacteria 5931
35 Ga0081540_1024321 3300005983 Bacteria 3517
36 Ga0081539_10001630 3300005985 Bacteria 36632
37 Ga0081539_10019594 3300005985 Bacteria 4622
38 Ga0075432_10003402 3300006058 Bacteria 5386
39 Ga0097621_100039542 3300006237 Bacteria 3789
40 Ga0075431_100062744 3300006847 Bacteria 3834
41 Ga0075431_100114030 3300006847 Bacteria 2790
42 Ga0075433_10017538 3300006852 Bacteria 5935
43 Ga0075433_10030170 3300006852 Bacteria 4625
44 Ga0075434_100095089 3300006871 Bacteria 2985
45 Ga0075436_100036298 3300006914 Bacteria 3401
46 Ga0075435_100009669 3300007076 Bacteria 7001
47 Ga0075435_100027284 3300007076 Bacteria 4465
48 Ga0105240_10086194 3300009093 Bacteria 3846
49 Ga0111539_10047122 3300009094 Bacteria 5153
50 Ga0105245_10021311 3300009098 Bacteria 5683
51 Ga0105245_10034335 3300009098 Bacteria 4499
52 Ga0114129_10022132 3300009147 Bacteria 9022
53 Ga0114129_10035154 3300009147 Bacteria 7080
54 Ga0114129_10105866 3300009147 Bacteria 3886
55 Ga0105241_10035837 3300009174 Bacteria 3732
56 Ga0105239_10048989 3300010375 Bacteria 4632
57 Ga0157370_10019388 3300013104 Bacteria 6824
58 Ga0157372_10074820 3300013307 Bacteria 3820
59 Ga0157375_10012641 3300013308 Bacteria 7493
60 Ga0157375_10268972 3300013308 Bacteria 1866
61 Ga0206353_11362243 3300020082 Bacteria 2943
62 Ga0207707_10009066 3300025912 Bacteria 8642
63 Ga0207707_10026999 3300025912 Bacteria 5018
64 Ga0207693_10013459 3300025915 Bacteria 6596
65 Ga0207660_10020882 3300025917 Bacteria 4400
66 Ga0207657_10000299 3300025919 Bacteria 52815
67 Ga0207657_10002594 3300025919 Bacteria 19556
68 Ga0207657_10009042 3300025919 Bacteria 10058
69 Ga0207657_10090071 3300025919 Bacteria 2560
70 Ga0207652_10007046 3300025921 Bacteria 9060
71 Ga0207652_10055287 3300025921 Bacteria 3413
72 Ga0207700_10000001 3300025928 Bacteria 1122509
73 Ga0207664_10034460 3300025929 Bacteria 3899
74 Ga0207706_10010925 3300025933 Bacteria 8280
75 Ga0207706_10020398 3300025933 Bacteria 5958
76 Ga0207665_10001701 3300025939 Bacteria 14795
77 Ga0207661_10095378 3300025944 Bacteria 2487
78 Ga0207667_10107501 3300025949 Bacteria 2878
79 Ga0207708_10048560 3300026075 Bacteria 3231
80 Ga0207702_10012256 3300026078 Bacteria 7135
81 Ga0207676_10079642 3300026095 Bacteria 2657
82 Ga0207674_10000602 3300026116 Bacteria 47280
83 Ga0207683_10033520 3300026121 Bacteria 4461
84 Ga0207698_10043209 3300026142 Bacteria 3375
85 Ga0207428_10003917 3300027907 Bacteria 14275
86 Ga0265326_10005795 3300028558 Bacteria 3878
87 Ga0265319_1002245 3300028563 Bacteria 10729
88 Ga0265334_10002050 3300028573 Bacteria 9535
89 Ga0265318_10000318 3300028577 Bacteria 38555
90 Ga0265338_10002449 3300028800 Bacteria 27807
91 Ga0265338_10010637 3300028800 Bacteria 10751
92 Ga0265325_10000227 3300031241 Bacteria 39858
93 Ga0265339_10002574 3300031249 Bacteria 12922
94 Ga0265339_10016618 3300031249 Bacteria 4380
95 Ga0265331_10002648 3300031250 Bacteria 11992
96 Ga0265327_10007597 3300031251 Bacteria 8320
97 Ga0307409_100039027 3300031995 Bacteria 3520
98 Ga0307416_100039257 3300032002 Bacteria 3663
99 Ga0373944_0000675 3300035089 Bacteria 8181
100 Ga0373946_0013899 3300035171 Bacteria 3031
101 Ga0373961_0005304 3300035241 Bacteria 3100
102 Ga0373947_0006646 3300035725 Bacteria 6711
103 Ga0373947_0009996 3300035725 Bacteria 5447
104 Ga0373925_0003779 3300037068 Bacteria 11641
105 Ga0395899_0001897 3300037312 Bacteria 17264
106 Ga0395899_0006701 3300037312 Bacteria 8924
107 Ga0395899_0006820 3300037312 Bacteria 8844
108 Ga0395900_0000486 3300037418 Bacteria 56413
109 Ga0395900_0002741 3300037418 Bacteria 19239
110 Ga0395900_0009667 3300037418 Bacteria 9887
111 Ga0395900_0009932 3300037418 Bacteria 9744
112 Ga0395900_0017669 3300037418 Bacteria 7280
113 Ga0395900_0018294 3300037418 Bacteria 7148
114 Ga0395900_0038104 3300037418 Bacteria 4956
115 Ga0395900_0044006 3300037418 Bacteria 4602
116 Ga0395900_0048234 3300037418 Bacteria 4387
117 Ga0395900_0214262 3300037418 Bacteria 1944
118 Ga0395898_0001634 3300037466 Bacteria 30332
119 Ga0395898_0008630 3300037466 Bacteria 10753
120 Ga0395898_0014970 3300037466 Bacteria 7964
121 Ga0395898_0018356 3300037466 Bacteria 7133
122 Ga0395898_0025844 3300037466 Bacteria 5911
123 Ga0395898_0040264 3300037466 Bacteria 4621
124 Ga0395898_0045518 3300037466 Bacteria 4313
125 Ga0395905_0000615 3300037471 Bacteria 47752
126 Ga0395905_0001573 3300037471 Bacteria 27258
127 Ga0395905_0046069 3300037471 Bacteria 4089
128 Ga0395901_0002410 3300038443 Bacteria 18977
129 Ga0395901_0007953 3300038443 Bacteria 10698
130 Ga0395901_0021061 3300038443 Bacteria 6679
131 Ga0395901_0036060 3300038443 Bacteria 5109
132 Ga0395901_0070542 3300038443 Bacteria 3640
133 Ga0395901_0078774 3300038443 Bacteria 3441
134 Ga0395901_0176297 3300038443 Bacteria 2242
135 Ga0395901_0192772 3300038443 Bacteria 2137
136 Ga0436365_1046840 3300039437 Bacteria 3914
137 Ga0436360_1195938 3300039438 Bacteria 8382
138 Ga0451853_2140954 3300041512 Bacteria 9351
139 Ga0466966_0004349 3300044684 Bacteria 9342
140 Ga0466966_0041405 3300044684 Bacteria 2960
141 Ga0466961_0002376 3300044693 Bacteria 11691
142 Ga0466961_0008403 3300044693 Bacteria 6575
143 Ga0466963_0003272 3300044694 Bacteria 9235
144 Ga0466963_0008549 3300044694 Bacteria 6143
145 Ga0466963_0012470 3300044694 Bacteria 5204
146 Ga0466963_0016123 3300044694 Bacteria 4642
147 Ga0466963_0088464 3300044694 Bacteria 2107
148 Ga0466971_0000590 3300044719 Bacteria 14368
149 Ga0466971_0031735 3300044719 Bacteria 2366
150 Ga0466968_0001498 3300044735 Bacteria 8360
151 Ga0466970_0014003 3300044765 Bacteria 4115
152 Ga0466957_0002405 3300044842 Bacteria 10047
153 Ga0466957_0002526 3300044842 Bacteria 9843
154 Ga0466959_0006977 3300045049 Bacteria 7893
155 Ga0451576_0014006 3300045051 Bacteria 8941
156 Ga0466958_0001026 3300045836 Bacteria 12733
157 Ga0466958_0006894 3300045836 Bacteria 6212
158 Ga0466958_0040678 3300045836 Bacteria 2794
159 Ga0466967_0006331 3300045976 Bacteria 8358
160 Ga0466967_0008735 3300045976 Bacteria 7462
161 Ga0466967_0021448 3300045976 Bacteria 5247
162 Ga0466967_0143282 3300045976 Bacteria 2227
163 Ga0495592_0018012 3300046454 Bacteria 5365
164 Ga0495603_0010836 3300046455 Bacteria 5530
165 Ga0495629_0032357 3300046459 Bacteria 3703
166 Ga0495629_0141370 3300046459 Bacteria 1675
167 Ga0495641_0001728 3300046461 Bacteria 18228
168 Ga0495641_0017568 3300046461 Bacteria 3724
169 Ga0495582_0004218 3300046473 Bacteria 8085
170 Ga0495664_0055642 3300046477 Bacteria 2354
171 Ga0495608_0007897 3300046511 Bacteria 7477
172 Ga0495618_0026427 3300046514 Bacteria 3609
173 Ga0495630_0018166 3300046517 Bacteria 5164
174 Ga0495588_0000666 3300046674 Bacteria 15878
175 Ga0495588_0010653 3300046674 Bacteria 4285
176 Ga0495657_0051755 3300046675 Bacteria 2757
177 Ga0495658_0023076 3300046683 Bacteria 3300
178 Ga0495613_0008582 3300046689 Bacteria 7584
179 Ga0495581_0005695 3300047315 Bacteria 7225
180 Ga0495674_0037881 3300047319 Bacteria 4332
181 Ga0495674_0049534 3300047319 Bacteria 3712
182 Ga0495676_0003460 3300047321 Bacteria 14284
183 Ga0495676_0056642 3300047321 Bacteria 3098
184 Ga0495680_0002321 3300047322 Bacteria 19510
185 Ga0495680_0010943 3300047322 Bacteria 8061
186 Ga0495684_0072374 3300047471 Bacteria 2619
187 Ga0496100_0054938 3300048903 Bacteria 2600
188 Ga0496104_0006744 3300048907 Bacteria 10112
189 Ga0496104_0009032 3300048907 Bacteria 8862
190 Ga0496104_0020103 3300048907 Bacteria 6118
191 Ga0496105_0000750 3300048908 Bacteria 22004
192 Ga0496105_0001262 3300048908 Bacteria 17671
193 Ga0496107_0030571 3300048910 Bacteria 3838
194 Ga0496108_0004794 3300048911 Bacteria 10910
195 Ga0496108_0014723 3300048911 Bacteria 6383
196 Ga0496108_0121118 3300048911 Bacteria 2244
197 Ga0496109_0003537 3300048912 Bacteria 13039
198 Ga0496109_0005181 3300048912 Bacteria 10883
199 Ga0496109_0017092 3300048912 Bacteria 6348
200 Ga0496110_0000810 3300048913 Bacteria 21899
201 Ga0496110_0002008 3300048913 Bacteria 15145
202 Ga0496110_0004466 3300048913 Bacteria 10844
203 Ga0496110_0007640 3300048913 Bacteria 8650
204 Ga0496110_0031971 3300048913 Bacteria 4542
205 Ga0496111_0001587 3300048914 Bacteria 13129
206 Ga0496111_0004994 3300048914 Bacteria 8439
207 Ga0496111_0006363 3300048914 Bacteria 7664
208 Ga0496111_0018163 3300048914 Bacteria 4869
209 Ga0496111_0064449 3300048914 Bacteria 2658
210 Ga0496112_0000204 3300048915 Bacteria 38947
211 Ga0496112_0007311 3300048915 Bacteria 9794
212 Ga0496112_0022651 3300048915 Bacteria 5990
213 Ga0496112_0081436 3300048915 Bacteria 3201
214 Ga0496114_0070241 3300048917 Bacteria 2941
215 Ga0496115_0004501 3300048918 Bacteria 10083
216 Ga0501067_0001407 3300049583 Bacteria 13058
217 Ga0501067_0003987 3300049583 Bacteria 8149
218 Ga0501067_0019813 3300049583 Bacteria 3724
219 Ga0501069_0006024 3300049585 Bacteria 6327
220 Ga0501069_0014138 3300049585 Bacteria 4262
221 Ga0501074_0067002 3300049590 Bacteria 2582
222 nmdc:mga05p37_156380_c1 3300050507 Bacteria 2786
223 nmdc:mga05p37_22170_c1 3300050507 Bacteria 7699
224 nmdc:mga0rr50_111669_c1 3300050513 Bacteria 2164
225 nmdc:mga0rr50_6001_c1 3300050513 Bacteria 7332
226 nmdc:mga0rr50_933_c2 3300050513 Bacteria 13017
227 nmdc:mga08x19_20188_c1 3300050514 Bacteria 4102
228 nmdc:mga0a205_4922_c1 3300050515 Bacteria 12016
229 nmdc:mga0a205_53583_c1 3300050515 Bacteria 3894
230 Ga0495601_0030914 3300053077 Bacteria 3327
231 Ga0495595_0034930 3300053084 Bacteria 2276
232 Ga0495619_0043013 3300053085 Bacteria 2960
233 Ga0495619_0066499 3300053085 Bacteria 2405
234 Ga0466962_0001633 3300061719 Bacteria 10512
235 Ga0466962_0025316 3300061719 Bacteria 2849
236 Ga0530510_0013143 3300061734 Bacteria 5823
237 Ga0495586_0013192
238 Ga0070658_10052991
239 Ga0070683_100001132
240 Ga0070683_100009621
241 Ga0070683_100037757
242 Ga0070683_100040524
243 Ga0070680_100005468
244 Ga0070660_100000675
245 Ga0070660_100026697
246 Ga0070660_100036037
247 Ga0070659_100048033
248 Ga0070714_100053340
249 Ga0070681_10002916
250 Ga0070681_10007090
251 Ga0070681_10015530
252 Ga0070681_10128138
253 Ga0070698_100007579
254 Ga0070698_100060064
255 Ga0070679_100001630
256 Ga0070679_100010400
257 Ga0070679_100068043
258 Ga0070679_100142598
259 Ga0070684_100004414
260 Ga0070696_100022014
261 Ga0068855_100136873
262 Ga0068855_100207515
263 Ga0068857_100001406
264 Ga0068856_100073145
265 Ga0068856_100103596
266 Ga0068852_100056650
267 Ga0068864_100102168
268 Ga0068861_100025974
269 Ga0081455_10052410
270 Ga0081540_1011431
271 Ga0081540_1024321
272 Ga0081539_10001630
273 Ga0081539_10019594
274 Ga0075432_10003402
275 Ga0097621_100039542
276 Ga0075431_100062744
277 Ga0075431_100114030
278 Ga0075433_10017538
279 Ga0075433_10030170
280 Ga0075434_100095089
281 Ga0075436_100036298
282 Ga0075435_100009669
283 Ga0075435_100027284
284 Ga0105240_10086194
285 Ga0111539_10047122
286 Ga0105245_10021311
287 Ga0105245_10034335
288 Ga0114129_10022132
289 Ga0114129_10035154
290 Ga0114129_10105866
291 Ga0105241_10035837
292 Ga0105239_10048989
293 Ga0157370_10019388
294 Ga0157372_10074820
295 Ga0157375_10012641
296 Ga0157375_10268972
297 Ga0206353_11362243
298 Ga0207707_10009066
299 Ga0207707_10026999
300 Ga0207693_10013459
301 Ga0207660_10020882
302 Ga0207657_10000299
303 Ga0207657_10002594
304 Ga0207657_10009042
305 Ga0207657_10090071
306 Ga0207652_10007046
307 Ga0207652_10055287
308 Ga0207700_10000001
309 Ga0207664_10034460
310 Ga0207706_10010925
311 Ga0207706_10020398
312 Ga0207665_10001701
313 Ga0207661_10095378
314 Ga0207667_10107501
315 Ga0207708_10048560
316 Ga0207702_10012256
317 Ga0207676_10079642
318 Ga0207674_10000602
319 Ga0207683_10033520
320 Ga0207698_10043209
321 Ga0207428_10003917
322 Ga0265326_10005795
323 Ga0265319_1002245
324 Ga0265334_10002050
325 Ga0265318_10000318
326 Ga0265338_10002449
327 Ga0265338_10010637
328 Ga0265325_10000227
329 Ga0265339_10002574
330 Ga0265339_10016618
331 Ga0265331_10002648
332 Ga0265327_10007597
333 Ga0307409_100039027
334 Ga0307416_100039257
335 Ga0373944_0000675
336 Ga0373946_0013899
337 Ga0373961_0005304
338 Ga0373947_0006646
339 Ga0373947_0009996
340 Ga0373925_0003779
341 Ga0395899_0001897
342 Ga0395899_0006701
343 Ga0395899_0006820
344 Ga0395900_0000486
345 Ga0395900_0002741
346 Ga0395900_0009667
347 Ga0395900_0009932
348 Ga0395900_0017669
349 Ga0395900_0018294
350 Ga0395900_0038104
351 Ga0395900_0044006
352 Ga0395900_0048234
353 Ga0395900_0214262
354 Ga0395898_0001634
355 Ga0395898_0008630
356 Ga0395898_0014970
357 Ga0395898_0018356
358 Ga0395898_0025844
359 Ga0395898_0040264
360 Ga0395898_0045518
361 Ga0395905_0000615
362 Ga0395905_0001573
363 Ga0395905_0046069
364 Ga0395901_0002410
365 Ga0395901_0007953
366 Ga0395901_0021061
367 Ga0395901_0036060
368 Ga0395901_0070542
369 Ga0395901_0078774
370 Ga0395901_0176297
371 Ga0395901_0192772
372 Ga0436365_1046840
373 Ga0436360_1195938
374 Ga0451853_2140954
375 Ga0466966_0004349
376 Ga0466966_0041405
377 Ga0466961_0002376
378 Ga0466961_0008403
379 Ga0466963_0003272
380 Ga0466963_0008549
381 Ga0466963_0012470
382 Ga0466963_0016123
383 Ga0466963_0088464
384 Ga0466971_0000590
385 Ga0466971_0031735
386 Ga0466968_0001498
387 Ga0466970_0014003
388 Ga0466957_0002405
389 Ga0466957_0002526
390 Ga0466959_0006977
391 Ga0451576_0014006
392 Ga0466958_0001026
393 Ga0466958_0006894
394 Ga0466958_0040678
395 Ga0466967_0006331
396 Ga0466967_0008735
397 Ga0466967_0021448
398 Ga0466967_0143282
399 Ga0495592_0018012
400 Ga0495603_0010836
401 Ga0495629_0032357
402 Ga0495629_0141370
403 Ga0495641_0001728
404 Ga0495641_0017568
405 Ga0495582_0004218
406 Ga0495664_0055642
407 Ga0495608_0007897
408 Ga0495618_0026427
409 Ga0495630_0018166
410 Ga0495588_0000666
411 Ga0495588_0010653
412 Ga0495657_0051755
413 Ga0495658_0023076
414 Ga0495613_0008582
415 Ga0495581_0005695
416 Ga0495674_0037881
417 Ga0495674_0049534
418 Ga0495676_0003460
419 Ga0495676_0056642
420 Ga0495680_0002321
421 Ga0495680_0010943
422 Ga0495684_0072374
423 Ga0496100_0054938
424 Ga0496104_0006744
425 Ga0496104_0009032
426 Ga0496104_0020103
427 Ga0496105_0000750
428 Ga0496105_0001262
429 Ga0496107_0030571
430 Ga0496108_0004794
431 Ga0496108_0014723
432 Ga0496108_0121118
433 Ga0496109_0003537
434 Ga0496109_0005181
435 Ga0496109_0017092
436 Ga0496110_0000810
437 Ga0496110_0002008
438 Ga0496110_0004466
439 Ga0496110_0007640
440 Ga0496110_0031971
441 Ga0496111_0001587
442 Ga0496111_0004994
443 Ga0496111_0006363
444 Ga0496111_0018163
445 Ga0496111_0064449
446 Ga0496112_0000204
447 Ga0496112_0007311
448 Ga0496112_0022651
449 Ga0496112_0081436
450 Ga0496114_0070241
451 Ga0496115_0004501
452 Ga0501067_0001407
453 Ga0501067_0003987
454 Ga0501067_0019813
455 Ga0501069_0006024
456 Ga0501069_0014138
457 Ga0501074_0067002
458 nmdc:mga05p37_156380_c1
459 nmdc:mga05p37_22170_c1
460 nmdc:mga0rr50_111669_c1
461 nmdc:mga0rr50_6001_c1
462 nmdc:mga0rr50_933_c2
463 nmdc:mga08x19_20188_c1
464 nmdc:mga0a205_4922_c1
465 nmdc:mga0a205_53583_c1
466 Ga0495601_0030914
467 Ga0495595_0034930
468 Ga0495619_0043013
469 Ga0495619_0066499
470 Ga0466962_0001633
471 Ga0466962_0025316
472 Ga0530510_0013143

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00570

HRDC

HRDC domain

621

686

0.97

PF00570

HRDC

HRDC domain

526

592

0.96

PF13361

UvrD_C

UvrD-like helicase C-terminal domain

418

497

0.94

PF13361

UvrD_C

UvrD-like helicase C-terminal domain

270

362

0.93

PF00580

UvrD-helicase

UvrD/REP helicase N-terminal domain

7

265

0.89

PF13245

AAA_19

AAA domain

11

250

0.89

PF13538

UvrD_C_2

UvrD-like helicase C-terminal domain

434

493

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
1wud-assembly1.cif.gz_A e. coli recq hrdc domain 0.9853 539 603
2rhf-assembly1.cif.gz_A d. radiodurans recq hrdc domain 3 0.9796 538 602
1yt3-assembly1.cif.gz_A crystal structure of escherichia coli rnase d, an exoribonuclease involved in structured rna processing 0.9303 538 603
2e1e-assembly1.cif.gz_A crystal structure of the hrdc domain of human werner syndrome protein, wrn 0.9227 538 603
2pjr-assembly1.cif.gz_G helicase product complex 0.9157 450 523
ID Description Score Start End Superfamily
2rhfA00 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;HRDC domain 0.9535 538 602 1.10.150.80
4cgzA04 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;HRDC domain 0.939 538 603 1.10.150.80
1yt3A02 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;HRDC domain 0.9303 538 603 1.10.150.80
af_Q14191_1145_1233_1.10.150.80 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;HRDC domain 0.9294 539 603 1.10.150.80
2rrdA00 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;HRDC domain 0.9121 539 603 1.10.150.80
ID Description Score Start End GO Terms
AF-A0A6I3DP32-F1-model_v4 deleted 0.9206 3 253
AF-A0A842PKI2-F1-model_v4 DNA 3'-5' helicase (EC 5.6.2.4) 0.895 528 603 GO:0000166
GO:0003676
GO:0005694
GO:0005737
GO:0006260
GO:0006281
GO:0006310
GO:0009378
GO:0043138
AF-W4UFZ5-F1-model_v4 deleted 0.8868 3 327
AF-A0A7W0Y001-F1-model_v4 ATP-dependent helicase 0.8855 3 263 GO:0000725
GO:0003677
GO:0005524
GO:0005829
GO:0016787
GO:0033202
GO:0043138
AF-A0A521KBB5-F1-model_v4 DNA 3'-5' helicase (EC 5.6.2.4) 0.8809 3 448 GO:0000725
GO:0003677
GO:0005524
GO:0005829
GO:0009378
GO:0016787
GO:0016853
GO:0033202
GO:0036121
GO:0061749
GO:1990518

Map