F349330

General Info

Members Datasets Scaffolds Average Seq Length
236 170 222 354

Family's Representative Sequence

Representative Sequence 3300045051|Ga0451576_0000147|Ga0451576_0000147_9827_10903
Length 353
Sequence MFYRENGQFKTTYKADQQAFAIPQDRWAIVAIVVFAFIGIPLLVDEYLFRAILVPFLILSLAALGVNILVGYCGQITLGAGASMAVGAYAAYNFLIRVDGMPALAAILLGGMGIVFGAPSLRVRGLYLAVATLAAQFFWDWAFLRIKWFTNNASSGSVSVADIKLFGWTISTPTDKYLFCLGVLVVFSLMAKNLLRGNMGRQWMAIRDMDVAATVIGIRPMYAKLTAFAVSSFYLGVAGALWGMVNLGSWEPAAFSIDRSLQLLFMVIIGGMGAISGSFFGAAFIVILPIFLNQMLPLVGGLFGLEVSIALVSHVEFIVFGSLIVFFLIVEPHGIARLWATGREKLRLWPFPH

Samples

Sample ID Description Type Environment
1 2585428057 Methylibium sp. YR605 Isolate Rhizosphere
2 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
3 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
4 2643221592 Rhizobacter sp. Root16D2 Isolate Unclassified
5 2643221625 Rhizobacter sp. Root29 Isolate Unclassified
6 2643221648 Rhizobacter sp. Root1238 Isolate Unclassified
7 2643221683 Variovorax sp. Root473 Isolate Unclassified
8 2738541307 Variovorax sp. GV008 Isolate Unclassified
9 2738543013 Variovorax sp. BT01 Isolate Unclassified
10 2831864461 Roseateles noduli HZ7 Isolate Nodule
11 2842733646 Variovorax sp. R-72446 Isolate Unclassified
12 2842747753 Variovorax sp. R-72060 Isolate Unclassified
13 2919704043 Hydrogenophaga palleronii 4249 Isolate Unclassified
14 2954767861 Variovorax sp. TBS-050B Isolate Rhizosphere
15 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
16 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
17 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
18 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
19 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
20 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
21 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
22 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
23 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
24 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
25 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
26 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
27 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
28 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
29 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
30 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
31 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
32 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
33 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
34 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
35 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
36 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
41 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
42 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
43 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
44 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
48 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
51 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
55 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
56 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
57 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
58 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
59 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
60 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
61 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
62 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
63 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
64 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
66 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
67 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027395 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
94 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
95 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
96 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
101 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
102 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
103 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
104 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
105 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
106 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
107 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
108 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
109 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
110 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
111 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
112 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
113 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
114 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
115 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
116 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
117 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
118 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
119 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
120 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
121 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
122 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
123 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
124 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
125 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
126 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
127 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
128 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
129 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
130 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
131 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
132 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
133 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
134 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
135 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
136 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
137 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
138 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
139 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
140 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
141 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
142 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
143 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
144 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
145 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
146 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
147 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
148 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
149 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
150 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
151 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
152 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
153 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
154 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049670 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought Metagenome Rhizosphere
159 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
160 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
161 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
162 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
163 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
164 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
165 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
166 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
167 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
168 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
169 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
170 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.07
Metatranscriptomes 0
Isolates 5.93

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.41
Nodule 0.42
Rhizoplane 5.08
Rhizosphere 65.68
Stem 0
Stem Tuber 0
Unclassified 14.41

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25153J46596_10003674 3300003215 Bacteria 8494
2 Ga0065165_1000177 3300005262 Bacteria 113446
3 Ga0065165_1002331 3300005262 Bacteria 16569
4 Ga0065165_1027731 3300005262 Bacteria 1840
5 Ga0065712_10178322 3300005290 Bacteria 1202
6 Ga0065707_10084610 3300005295 Bacteria 6985
7 Ga0070676_10004505 3300005328 Bacteria 7334
8 Ga0070690_100006143 3300005330 Bacteria 6800
9 Ga0070670_100092775 3300005331 Bacteria 2597
10 Ga0070666_10021306 3300005335 Bacteria 4200
11 Ga0068868_100293222 3300005338 Bacteria 1380
12 Ga0070687_100029486 3300005343 Bacteria 2673
13 Ga0070692_10190865 3300005345 Bacteria 1193
14 Ga0070668_100033271 3300005347 Bacteria 3924
15 Ga0070668_100271412 3300005347 Bacteria 1414
16 Ga0070669_100003387 3300005353 Bacteria 11469
17 Ga0070669_100081852 3300005353 Bacteria 2406
18 Ga0070675_100069665 3300005354 Bacteria 2915
19 Ga0070673_100004630 3300005364 Bacteria 8723
20 Ga0070667_100011778 3300005367 Bacteria 7227
21 Ga0070667_100097120 3300005367 Bacteria 2541
22 Ga0070667_100145411 3300005367 Bacteria 2079
23 Ga0070678_100063404 3300005456 Bacteria 2735
24 Ga0068867_100005212 3300005459 Bacteria 9175
25 Ga0068867_100036226 3300005459 Bacteria 3580
26 Ga0068853_100190287 3300005539 Bacteria 1864
27 Ga0070672_100175506 3300005543 Bacteria 1784
28 Ga0068866_10016835 3300005718 Bacteria 3276
29 Ga0068861_100028186 3300005719 Bacteria 4097
30 Ga0068863_100050970 3300005841 Bacteria 3923
31 Ga0068863_100277315 3300005841 Bacteria 1624
32 Ga0068863_100328568 3300005841 Bacteria 1486
33 Ga0068858_100007813 3300005842 Bacteria 10325
34 Ga0068860_100005287 3300005843 Bacteria 13101
35 Ga0068860_100028838 3300005843 Bacteria 5341
36 Ga0068862_100013796 3300005844 Bacteria 6697
37 Ga0075365_10101233 3300006038 Bacteria 1973
38 Ga0075366_10000550 3300006195 Bacteria 17475
39 Ga0075366_10001062 3300006195 Bacteria 13471
40 Ga0075366_10014866 3300006195 Bacteria 4450
41 Ga0075366_10150375 3300006195 Bacteria 1410
42 Ga0075370_10000148 3300006353 Bacteria 23924
43 Ga0075370_10015029 3300006353 Bacteria 4137
44 Ga0068865_100008781 3300006881 Bacteria 6247
45 Ga0105240_10046802 3300009093 Bacteria 5478
46 Ga0114129_10163775 3300009147 Bacteria 3036
47 Ga0105243_10236027 3300009148 Bacteria 1625
48 Ga0105237_10000646 3300009545 Bacteria 48623
49 Ga0105249_10045891 3300009553 Bacteria 3976
50 Ga0105239_10002203 3300010375 Bacteria 25060
51 Ga0157378_10016405 3300013297 Bacteria 6485
52 Ga0163162_10002024 3300013306 Bacteria 19068
53 Ga0163162_10133089 3300013306 Bacteria 2596
54 Ga0163162_10488607 3300013306 Bacteria 1362
55 Ga0157375_10035099 3300013308 Bacteria 4783
56 Ga0157375_10068352 3300013308 Bacteria 3555
57 Ga0157375_10203235 3300013308 Bacteria 2137
58 Ga0157379_10074513 3300014968 Bacteria 3039
59 Ga0157379_10103003 3300014968 Bacteria 2561
60 Ga0182006_1014658 3300015261 Bacteria 3374
61 Ga0182007_10004262 3300015262 Bacteria 6527
62 Ga0183362_10007 3300015683 Bacteria 240101
63 Ga0163161_10023099 3300017792 Bacteria 4383
64 Ga0163161_10051008 3300017792 Bacteria 2996
65 Ga0163161_10166773 3300017792 Bacteria 1682
66 Ga0213876_10019145 3300021384 Bacteria 3615
67 Ga0209759_1003031 3300025256 Bacteria 6929
68 Ga0209673_1019647 3300025273 Bacteria 2419
69 Ga0209130_1007497 3300025284 Bacteria 3358
70 Ga0209675_1002279 3300025291 Bacteria 9982
71 Ga0209676_1017024 3300025292 Bacteria 2591
72 Ga0209564_1000008 3300025295 Bacteria 953227
73 Ga0209758_1000453 3300025297 Bacteria 68482
74 Ga0209050_1000770 3300025298 Bacteria 46024
75 Ga0209051_1017862 3300025303 Bacteria 3157
76 Ga0209051_1032866 3300025303 Bacteria 1972
77 Ga0207642_10004467 3300025899 Bacteria 4513
78 Ga0207680_10079593 3300025903 Bacteria 2055
79 Ga0207645_10012782 3300025907 Bacteria 5688
80 Ga0207662_10021278 3300025918 Bacteria 3706
81 Ga0207681_10000880 3300025923 Bacteria 19761
82 Ga0207681_10006950 3300025923 Bacteria 6941
83 Ga0207681_10046178 3300025923 Bacteria 2929
84 Ga0207659_10042030 3300025926 Bacteria 3203
85 Ga0207706_10029440 3300025933 Bacteria 4901
86 Ga0207686_10034391 3300025934 Bacteria 3034
87 Ga0207704_10004659 3300025938 Bacteria 6286
88 Ga0207704_10135909 3300025938 Bacteria 1711
89 Ga0207691_10004921 3300025940 Bacteria 12890
90 Ga0207711_10385133 3300025941 Bacteria 1301
91 Ga0207689_10061738 3300025942 Bacteria 3082
92 Ga0207712_10006165 3300025961 Bacteria 7558
93 Ga0207668_10117910 3300025972 Bacteria 2004
94 Ga0207658_10049324 3300025986 Bacteria 3093
95 Ga0207658_10134461 3300025986 Bacteria 1991
96 Ga0207658_10167043 3300025986 Bacteria 1809
97 Ga0207658_10470471 3300025986 Bacteria 1115
98 Ga0207703_10002711 3300026035 Bacteria 15166
99 Ga0207703_10116130 3300026035 Bacteria 2291
100 Ga0207639_10112228 3300026041 Bacteria 2224
101 Ga0207639_10244117 3300026041 Bacteria 1563
102 Ga0207708_10208808 3300026075 Bacteria 1560
103 Ga0207641_10111434 3300026088 Bacteria 2426
104 Ga0207648_10006766 3300026089 Bacteria 11366
105 Ga0207674_10068915 3300026116 Bacteria 3558
106 Ga0207675_100027313 3300026118 Bacteria 5316
107 Ga0207683_10032028 3300026121 Bacteria 4565
108 Ga0207683_10086819 3300026121 Bacteria 2782
109 Ga0207683_10140773 3300026121 Bacteria 2174
110 Ga0209996_1000360 3300027395 Bacteria 5616
111 Ga0209968_1001483 3300027526 Bacteria 3569
112 Ga0209999_1003666 3300027543 Bacteria 2749
113 Ga0209970_1002208 3300027614 Bacteria 3338
114 Ga0209971_1019982 3300027682 Bacteria 1592
115 Ga0209971_1026252 3300027682 Bacteria 1392
116 Ga0209966_1000017 3300027695 Bacteria 71183
117 Ga0268265_10014821 3300028380 Bacteria 5321
118 Ga0268264_10013709 3300028381 Bacteria 6672
119 Ga0268264_10020158 3300028381 Bacteria 5449
120 Ga0307517_10013720 3300028786 Bacteria 10974
121 Ga0307517_10083713 3300028786 Bacteria 2693
122 Ga0307517_10157929 3300028786 Bacteria 1532
123 Ga0307515_10000281 3300028794 Bacteria 125306
124 Ga0307515_10037038 3300028794 Bacteria 7862
125 Ga0307511_10128302 3300030521 Bacteria 1538
126 Ga0307512_10046911 3300030522 Bacteria 3518
127 Ga0265332_10036030 3300031238 Bacteria 2148
128 Ga0265327_10000493 3300031251 Bacteria 69042
129 Ga0307509_10000249 3300031507 Bacteria 87094
130 Ga0307509_10004869 3300031507 Bacteria 19042
131 Ga0307408_100074344 3300031548 Bacteria 2521
132 Ga0307508_10000143 3300031616 Bacteria 85046
133 Ga0307508_10020206 3300031616 Bacteria 6049
134 Ga0307514_10001712 3300031649 Bacteria 25190
135 Ga0265314_10005007 3300031711 Bacteria 12071
136 Ga0307516_10000236 3300031730 Bacteria 71013
137 Ga0307516_10006296 3300031730 Bacteria 13946
138 Ga0307405_10015646 3300031731 Bacteria 4115
139 Ga0307409_100020364 3300031995 Bacteria 4518
140 Ga0307416_100000552 3300032002 Bacteria 19089
141 Ga0307411_10183398 3300032005 Bacteria 1591
142 Ga0307510_10006828 3300033180 Bacteria 13613
143 Ga0307510_10156434 3300033180 Bacteria 1885
144 Ga0307510_10156834 3300033180 Bacteria 1881
145 Ga0395900_0008457 3300037418 Bacteria 10582
146 Ga0395898_0007931 3300037466 Bacteria 11263
147 Ga0395905_0000090 3300037471 Bacteria 152117
148 Ga0395905_0000609 3300037471 Bacteria 47951
149 Ga0395905_0006895 3300037471 Bacteria 11356
150 Ga0395905_0007186 3300037471 Bacteria 11120
151 Ga0395905_0015893 3300037471 Bacteria 7150
152 Ga0395905_0052541 3300037471 Bacteria 3814
153 Ga0395905_0075449 3300037471 Bacteria 3160
154 Ga0395905_0203338 3300037471 Bacteria 1856
155 Ga0395901_0111899 3300038443 Bacteria 2867
156 Ga0395901_0309612 3300038443 Bacteria 1636
157 Ga0436365_1515056 3300039437 Bacteria 4305
158 Ga0451804_1079728 3300041463 Bacteria 1747
159 Ga0451577_0001888 3300042876 Bacteria 26618
160 Ga0451577_0019664 3300042876 Bacteria 6207
161 Ga0451577_0031053 3300042876 Bacteria 4822
162 Ga0451577_0188265 3300042876 Bacteria 1861
163 Ga0466972_0028792 3300044658 Bacteria 2738
164 Ga0466972_0041364 3300044658 Bacteria 2244
165 Ga0453683_0014530 3300044673 Bacteria 5109
166 Ga0453684_0047781 3300044712 Bacteria 5670
167 Ga0453684_0250214 3300044712 Bacteria 2035
168 Ga0451576_0000147 3300045051 Bacteria 179223
169 Ga0451576_0021327 3300045051 Bacteria 7041
170 Ga0495592_0000266 3300046454 Bacteria 44803
171 Ga0495590_0005135 3300046457 Bacteria 5210
172 Ga0495639_0045797 3300046475 Bacteria 1979
173 Ga0495639_0074814 3300046475 Bacteria 1569
174 Ga0495632_0013588 3300046519 Bacteria 4638
175 Ga0495642_0044808 3300046528 Bacteria 1806
176 Ga0495654_0015468 3300046530 Bacteria 4050
177 Ga0495586_0146378 3300046535 Bacteria 1328
178 Ga0495656_0000049 3300046615 Bacteria 56829
179 Ga0495588_0038759 3300046674 Bacteria 2425
180 Ga0495660_0014080 3300046810 Bacteria 4634
181 Ga0495686_0026689 3300047472 Bacteria 3778
182 Ga0496100_0033186 3300048903 Bacteria 3228
183 Ga0496101_0010134 3300048904 Bacteria 6214
184 Ga0496102_0011102 3300048905 Bacteria 7759
185 Ga0496103_0114430 3300048906 Bacteria 1715
186 Ga0496104_0068600 3300048907 Bacteria 3369
187 Ga0496105_0050618 3300048908 Bacteria 3431
188 Ga0496107_0184326 3300048910 Bacteria 1550
189 Ga0496109_0054884 3300048912 Bacteria 3634
190 Ga0496110_0040672 3300048913 Bacteria 4052
191 Ga0496111_0086127 3300048914 Bacteria 2298
192 Ga0496114_0207792 3300048917 Bacteria 1716
193 Ga0496122_0001818 3300048925 Bacteria 32577
194 Ga0496123_0000264 3300048926 Bacteria 105015
195 Ga0496125_0098098 3300048928 Bacteria 2169
196 Ga0496126_0149233 3300048929 Bacteria 2005
197 Ga0496126_0206022 3300048929 Bacteria 1658
198 Ga0501043_0000002 3300049579 Bacteria 351081
199 Ga0501046_0000008 3300049580 Bacteria 351167
200 Ga0501046_0093356 3300049580 Bacteria 2313
201 Ga0501047_0000003 3300049581 Bacteria 508375
202 Ga0501047_0240433 3300049581 Bacteria 1661
203 Ga0501048_0051873 3300049582 Bacteria 2919
204 Ga0501236_009769 3300049670 Bacteria 1244
205 Ga0501080_0095316 3300049742 Bacteria 2763
206 Ga0501045_0054534 3300049824 Bacteria 2922
207 nmdc:mga0k408_10400_c1 3300050493 Bacteria 5031
208 nmdc:mga0k408_132922_c1 3300050493 Bacteria 1477
209 nmdc:mga0k408_1384_c1 3300050493 Bacteria 13090
210 nmdc:mga0k408_729_c1 3300050493 Bacteria 18040
211 nmdc:mga07m45_160161_c1 3300050496 Bacteria 1306
212 nmdc:mga07m45_4414_c1 3300050496 Bacteria 5475
213 nmdc:mga07m45_7853_c1 3300050496 Bacteria 5462
214 nmdc:mga05p37_344336_c1 3300050507 Bacteria 1757
215 Ga0500578_0000025 3300053086 Bacteria 151485
216 Ga0500578_0095998 3300053086 Bacteria 1880
217 Ga0500592_010403 3300053116 Bacteria 1482
218 Ga0500642_0005609 3300053130 Bacteria 4064
219 Ga0500652_000177 3300053131 Bacteria 24784
220 Ga0500559_0018346 3300053136 Bacteria 2957
221 Ga0500622_0000890 3300053156 Bacteria 25460
222 Ga0590075_020434 3300059424 Bacteria 1648

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300027543 Ga0209999_1003666 Ga0209999_10036663 301
2 3300037471 Ga0395905_0006895 Ga0395905_0006895_2492_3556 331
3 3300028794 Ga0307515_10037038 Ga0307515_100370388 335
4 3300031616 Ga0307508_10000143 Ga0307508_1000014318 345
5 3300033180 Ga0307510_10156834 Ga0307510_101568342 345
6 3300042876 Ga0451577_0031053 Ga0451577_0031053_626_1702 345
7 3300028786 Ga0307517_10157929 Ga0307517_101579291 346
8 3300031251 Ga0265327_10000493 Ga0265327_1000049329 346
9 3300046457 Ga0495590_0005135 Ga0495590_0005135_4020_5096 346
10 3300046810 Ga0495660_0014080 Ga0495660_0014080_2939_4015 346
11 3300031616 Ga0307508_10020206 Ga0307508_100202063 347
12 3300042876 Ga0451577_0019664 Ga0451577_0019664_881_1957 347
13 3300044673 Ga0453683_0014530 Ga0453683_0014530_2339_3415 347
14 3300045051 Ga0451576_0000147 Ga0451576_0000147_9827_10903 349
15 iso_pu_bacteria 2585428057 2587725516 350
16 iso_pu_bacteria 2585428058 2587734986 350
17 iso_pu_bacteria 2588253510 2588290518 350
18 iso_pu_bacteria 2643221592 2643970032 350
19 iso_pu_bacteria 2643221625 2644142994 350
20 iso_pu_bacteria 2643221648 2644271946 350
21 iso_pu_bacteria 2643221683 2644466439 350
22 iso_pu_bacteria 2738541307 2738882132 350
23 iso_pu_bacteria 2738543013 2739251179 350
24 iso_pu_bacteria 2831864461 2831869087 350
25 iso_pu_bacteria 2842733646 2842737885 350
26 iso_pu_bacteria 2842747753 2842752180 350
27 iso_pu_bacteria 2919704043 2919705670 350
28 iso_pu_bacteria 2954767861 2954769553 350
29 3300049670 Ga0501236_009769 Ga0501236_009769_11_1096 353
30 3300003215 JGI25153J46596_10003674 JGI25153J46596_100036744 354
31 3300005262 Ga0065165_1000177 Ga0065165_100017736 354
32 3300005262 Ga0065165_1002331 Ga0065165_10023312 354
33 3300005262 Ga0065165_1027731 Ga0065165_10277312 354
34 3300005290 Ga0065712_10178322 Ga0065712_101783221 354
35 3300005295 Ga0065707_10084610 Ga0065707_100846105 354
36 3300005328 Ga0070676_10004505 Ga0070676_100045057 354
37 3300005330 Ga0070690_100006143 Ga0070690_1000061432 354
38 3300005331 Ga0070670_100092775 Ga0070670_1000927753 354
39 3300005335 Ga0070666_10021306 Ga0070666_100213062 354
40 3300005338 Ga0068868_100293222 Ga0068868_1002932222 354
41 3300005343 Ga0070687_100029486 Ga0070687_1000294862 354
42 3300005345 Ga0070692_10190865 Ga0070692_101908651 354
43 3300005347 Ga0070668_100033271 Ga0070668_1000332713 354
44 3300005347 Ga0070668_100271412 Ga0070668_1002714122 354
45 3300005353 Ga0070669_100003387 Ga0070669_1000033874 354
46 3300005353 Ga0070669_100081852 Ga0070669_1000818522 354
47 3300005354 Ga0070675_100069665 Ga0070675_1000696652 354
48 3300005364 Ga0070673_100004630 Ga0070673_1000046302 354
49 3300005367 Ga0070667_100011778 Ga0070667_1000117786 354
50 3300005367 Ga0070667_100097120 Ga0070667_1000971202 354
51 3300005367 Ga0070667_100145411 Ga0070667_1001454112 354
52 3300005456 Ga0070678_100063404 Ga0070678_1000634042 354
53 3300005459 Ga0068867_100005212 Ga0068867_1000052127 354
54 3300005459 Ga0068867_100036226 Ga0068867_1000362263 354
55 3300005539 Ga0068853_100190287 Ga0068853_1001902872 354
56 3300005543 Ga0070672_100175506 Ga0070672_1001755061 354
57 3300005718 Ga0068866_10016835 Ga0068866_100168352 354
58 3300005719 Ga0068861_100028186 Ga0068861_1000281861 354
59 3300005841 Ga0068863_100050970 Ga0068863_1000509702 354
60 3300005841 Ga0068863_100277315 Ga0068863_1002773152 354
61 3300005841 Ga0068863_100328568 Ga0068863_1003285682 354
62 3300005842 Ga0068858_100007813 Ga0068858_1000078133 354
63 3300005843 Ga0068860_100005287 Ga0068860_1000052877 354
64 3300005843 Ga0068860_100028838 Ga0068860_1000288383 354
65 3300005844 Ga0068862_100013796 Ga0068862_1000137964 354
66 3300006038 Ga0075365_10101233 Ga0075365_101012332 354
67 3300006195 Ga0075366_10000550 Ga0075366_100005506 354
68 3300006195 Ga0075366_10001062 Ga0075366_100010628 354
69 3300006195 Ga0075366_10014866 Ga0075366_100148664 354
70 3300006195 Ga0075366_10150375 Ga0075366_101503752 354
71 3300006353 Ga0075370_10000148 Ga0075370_100001482 354
72 3300006353 Ga0075370_10015029 Ga0075370_100150293 354
73 3300006881 Ga0068865_100008781 Ga0068865_1000087815 354
74 3300009093 Ga0105240_10046802 Ga0105240_100468024 354
75 3300009147 Ga0114129_10163775 Ga0114129_101637752 354
76 3300009148 Ga0105243_10236027 Ga0105243_102360272 354
77 3300009545 Ga0105237_10000646 Ga0105237_1000064620 354
78 3300009553 Ga0105249_10045891 Ga0105249_100458914 354
79 3300010375 Ga0105239_10002203 Ga0105239_100022034 354
80 3300013297 Ga0157378_10016405 Ga0157378_100164056 354
81 3300013306 Ga0163162_10002024 Ga0163162_1000202411 354
82 3300013306 Ga0163162_10133089 Ga0163162_101330893 354
83 3300013306 Ga0163162_10488607 Ga0163162_104886072 354
84 3300013308 Ga0157375_10035099 Ga0157375_100350994 354
85 3300013308 Ga0157375_10068352 Ga0157375_100683523 354
86 3300013308 Ga0157375_10203235 Ga0157375_102032352 354
87 3300014968 Ga0157379_10074513 Ga0157379_100745132 354
88 3300014968 Ga0157379_10103003 Ga0157379_101030032 354
89 3300015261 Ga0182006_1014658 Ga0182006_10146583 354
90 3300015262 Ga0182007_10004262 Ga0182007_100042624 354
91 3300015683 Ga0183362_10007 Ga0183362_1000734 354
92 3300017792 Ga0163161_10023099 Ga0163161_100230995 354
93 3300017792 Ga0163161_10051008 Ga0163161_100510083 354
94 3300017792 Ga0163161_10166773 Ga0163161_101667732 354
95 3300021384 Ga0213876_10019145 Ga0213876_100191453 354
96 3300025256 Ga0209759_1003031 Ga0209759_10030314 354
97 3300025273 Ga0209673_1019647 Ga0209673_10196472 354
98 3300025284 Ga0209130_1007497 Ga0209130_10074972 354
99 3300025291 Ga0209675_1002279 Ga0209675_10022795 354
100 3300025292 Ga0209676_1017024 Ga0209676_10170242 354
101 3300025295 Ga0209564_1000008 Ga0209564_1000008689 354
102 3300025297 Ga0209758_1000453 Ga0209758_100045336 354
103 3300025298 Ga0209050_1000770 Ga0209050_100077032 354
104 3300025303 Ga0209051_1017862 Ga0209051_10178624 354
105 3300025303 Ga0209051_1032866 Ga0209051_10328662 354
106 3300025899 Ga0207642_10004467 Ga0207642_100044674 354
107 3300025903 Ga0207680_10079593 Ga0207680_100795932 354
108 3300025907 Ga0207645_10012782 Ga0207645_100127825 354
109 3300025918 Ga0207662_10021278 Ga0207662_100212782 354
110 3300025923 Ga0207681_10000880 Ga0207681_1000088012 354
111 3300025923 Ga0207681_10006950 Ga0207681_100069504 354
112 3300025923 Ga0207681_10046178 Ga0207681_100461783 354
113 3300025926 Ga0207659_10042030 Ga0207659_100420302 354
114 3300025933 Ga0207706_10029440 Ga0207706_100294403 354
115 3300025934 Ga0207686_10034391 Ga0207686_100343911 354
116 3300025938 Ga0207704_10004659 Ga0207704_100046595 354
117 3300025938 Ga0207704_10135909 Ga0207704_101359092 354
118 3300025940 Ga0207691_10004921 Ga0207691_100049212 354
119 3300025941 Ga0207711_10385133 Ga0207711_103851331 354
120 3300025942 Ga0207689_10061738 Ga0207689_100617381 354
121 3300025961 Ga0207712_10006165 Ga0207712_100061656 354
122 3300025972 Ga0207668_10117910 Ga0207668_101179102 354
123 3300025986 Ga0207658_10049324 Ga0207658_100493243 354
124 3300025986 Ga0207658_10134461 Ga0207658_101344612 354
125 3300025986 Ga0207658_10167043 Ga0207658_101670431 354
126 3300025986 Ga0207658_10470471 Ga0207658_104704711 354
127 3300026035 Ga0207703_10002711 Ga0207703_1000271113 354
128 3300026035 Ga0207703_10116130 Ga0207703_101161301 354
129 3300026041 Ga0207639_10112228 Ga0207639_101122282 354
130 3300026041 Ga0207639_10244117 Ga0207639_102441172 354
131 3300026075 Ga0207708_10208808 Ga0207708_102088082 354
132 3300026088 Ga0207641_10111434 Ga0207641_101114343 354
133 3300026089 Ga0207648_10006766 Ga0207648_100067665 354
134 3300026116 Ga0207674_10068915 Ga0207674_100689153 354
135 3300026118 Ga0207675_100027313 Ga0207675_1000273133 354
136 3300026121 Ga0207683_10032028 Ga0207683_100320282 354
137 3300026121 Ga0207683_10086819 Ga0207683_100868192 354
138 3300026121 Ga0207683_10140773 Ga0207683_101407732 354
139 3300027395 Ga0209996_1000360 Ga0209996_10003602 354
140 3300027526 Ga0209968_1001483 Ga0209968_10014832 354
141 3300027614 Ga0209970_1002208 Ga0209970_10022083 354
142 3300027682 Ga0209971_1019982 Ga0209971_10199821 354
143 3300027682 Ga0209971_1026252 Ga0209971_10262522 354
144 3300027695 Ga0209966_1000017 Ga0209966_100001710 354
145 3300028380 Ga0268265_10014821 Ga0268265_100148212 354
146 3300028381 Ga0268264_10013709 Ga0268264_100137094 354
147 3300028381 Ga0268264_10020158 Ga0268264_100201583 354
148 3300028786 Ga0307517_10013720 Ga0307517_100137203 354
149 3300028786 Ga0307517_10083713 Ga0307517_100837132 354
150 3300028794 Ga0307515_10000281 Ga0307515_1000028122 354
151 3300030521 Ga0307511_10128302 Ga0307511_101283021 354
152 3300030522 Ga0307512_10046911 Ga0307512_100469114 354
153 3300031238 Ga0265332_10036030 Ga0265332_100360302 354
154 3300031507 Ga0307509_10000249 Ga0307509_100002491 354
155 3300031507 Ga0307509_10004869 Ga0307509_1000486914 354
156 3300031548 Ga0307408_100074344 Ga0307408_1000743442 354
157 3300031649 Ga0307514_10001712 Ga0307514_100017129 354
158 3300031711 Ga0265314_10005007 Ga0265314_100050072 354
159 3300031730 Ga0307516_10000236 Ga0307516_1000023658 354
160 3300031730 Ga0307516_10006296 Ga0307516_100062967 354
161 3300031731 Ga0307405_10015646 Ga0307405_100156462 354
162 3300031995 Ga0307409_100020364 Ga0307409_1000203644 354
163 3300032002 Ga0307416_100000552 Ga0307416_1000005529 354
164 3300032005 Ga0307411_10183398 Ga0307411_101833982 354
165 3300033180 Ga0307510_10006828 Ga0307510_100068286 354
166 3300033180 Ga0307510_10156434 Ga0307510_101564342 354
167 3300037418 Ga0395900_0008457 Ga0395900_0008457_7743_8819 354
168 3300037466 Ga0395898_0007931 Ga0395898_0007931_1416_2492 354
169 3300037471 Ga0395905_0000090 Ga0395905_0000090_76897_77973 354
170 3300037471 Ga0395905_0000609 Ga0395905_0000609_37960_39036 354
171 3300037471 Ga0395905_0007186 Ga0395905_0007186_8750_9814 354
172 3300037471 Ga0395905_0015893 Ga0395905_0015893_4938_6014 354
173 3300037471 Ga0395905_0052541 Ga0395905_0052541_1430_2506 354
174 3300037471 Ga0395905_0075449 Ga0395905_0075449_634_1710 354
175 3300037471 Ga0395905_0203338 Ga0395905_0203338_469_1545 354
176 3300038443 Ga0395901_0111899 Ga0395901_0111899_953_2029 354
177 3300038443 Ga0395901_0309612 Ga0395901_0309612_21_1097 354
178 3300039437 Ga0436365_1515056 Ga0436365_1515056_2420_3484 354
179 3300041463 Ga0451804_1079728 Ga0451804_1079728_376_1440 354
180 3300042876 Ga0451577_0001888 Ga0451577_0001888_24722_25786 354
181 3300042876 Ga0451577_0188265 Ga0451577_0188265_87_1163 354
182 3300044658 Ga0466972_0028792 Ga0466972_0028792_287_1351 354
183 3300044658 Ga0466972_0041364 Ga0466972_0041364_776_1840 354
184 3300044712 Ga0453684_0047781 Ga0453684_0047781_3330_4394 354
185 3300044712 Ga0453684_0250214 Ga0453684_0250214_456_1520 354
186 3300045051 Ga0451576_0021327 Ga0451576_0021327_344_1420 354
187 3300046454 Ga0495592_0000266 Ga0495592_0000266_43220_44284 354
188 3300046475 Ga0495639_0045797 Ga0495639_0045797_728_1792 354
189 3300046475 Ga0495639_0074814 Ga0495639_0074814_231_1295 354
190 3300046519 Ga0495632_0013588 Ga0495632_0013588_2982_4046 354
191 3300046528 Ga0495642_0044808 Ga0495642_0044808_429_1493 354
192 3300046530 Ga0495654_0015468 Ga0495654_0015468_379_1455 354
193 3300046535 Ga0495586_0146378 Ga0495586_0146378_122_1186 354
194 3300046615 Ga0495656_0000049 Ga0495656_0000049_18661_19725 354
195 3300046674 Ga0495588_0038759 Ga0495588_0038759_121_1185 354
196 3300047472 Ga0495686_0026689 Ga0495686_0026689_1157_2221 354
197 3300048903 Ga0496100_0033186 Ga0496100_0033186_1406_2470 354
198 3300048904 Ga0496101_0010134 Ga0496101_0010134_3952_5016 354
199 3300048905 Ga0496102_0011102 Ga0496102_0011102_3078_4142 354
200 3300048906 Ga0496103_0114430 Ga0496103_0114430_624_1688 354
201 3300048907 Ga0496104_0068600 Ga0496104_0068600_459_1523 354
202 3300048908 Ga0496105_0050618 Ga0496105_0050618_755_1819 354
203 3300048910 Ga0496107_0184326 Ga0496107_0184326_187_1251 354
204 3300048912 Ga0496109_0054884 Ga0496109_0054884_1030_2094 354
205 3300048913 Ga0496110_0040672 Ga0496110_0040672_735_1799 354
206 3300048914 Ga0496111_0086127 Ga0496111_0086127_623_1687 354
207 3300048917 Ga0496114_0207792 Ga0496114_0207792_468_1532 354
208 3300048925 Ga0496122_0001818 Ga0496122_0001818_22777_23841 354
209 3300048926 Ga0496123_0000264 Ga0496123_0000264_95197_96261 354
210 3300048928 Ga0496125_0098098 Ga0496125_0098098_577_1641 354
211 3300048929 Ga0496126_0149233 Ga0496126_0149233_530_1594 354
212 3300048929 Ga0496126_0206022 Ga0496126_0206022_181_1245 354
213 3300049579 Ga0501043_0000002 Ga0501043_0000002_296016_297080 354
214 3300049580 Ga0501046_0000008 Ga0501046_0000008_296113_297177 354
215 3300049580 Ga0501046_0093356 Ga0501046_0093356_1174_2250 354
216 3300049581 Ga0501047_0000003 Ga0501047_0000003_319281_320345 354
217 3300049581 Ga0501047_0240433 Ga0501047_0240433_32_1108 354
218 3300049582 Ga0501048_0051873 Ga0501048_0051873_696_1760 354
219 3300049742 Ga0501080_0095316 Ga0501080_0095316_1353_2429 354
220 3300049824 Ga0501045_0054534 Ga0501045_0054534_716_1780 354
221 3300050493 nmdc:mga0k408_10400_c1 nmdc:mga0k408_10400_c1_605_1669 354
222 3300050493 nmdc:mga0k408_132922_c1 nmdc:mga0k408_132922_c1_393_1457 354
223 3300050493 nmdc:mga0k408_1384_c1 nmdc:mga0k408_1384_c1_4424_5488 354
224 3300050493 nmdc:mga0k408_729_c1 nmdc:mga0k408_729_c1_79_1143 354
225 3300050496 nmdc:mga07m45_160161_c1 nmdc:mga07m45_160161_c1_214_1278 354
226 3300050496 nmdc:mga07m45_4414_c1 nmdc:mga07m45_4414_c1_107_1171 354
227 3300050496 nmdc:mga07m45_7853_c1 nmdc:mga07m45_7853_c1_4214_5278 354
228 3300050507 nmdc:mga05p37_344336_c1 nmdc:mga05p37_344336_c1_618_1682 354
229 3300053086 Ga0500578_0000025 Ga0500578_0000025_29186_30250 354
230 3300053086 Ga0500578_0095998 Ga0500578_0095998_687_1751 354
231 3300053116 Ga0500592_010403 Ga0500592_010403_40_1104 354
232 3300053130 Ga0500642_0005609 Ga0500642_0005609_1559_2623 354
233 3300053131 Ga0500652_000177 Ga0500652_000177_22995_24059 354
234 3300053136 Ga0500559_0018346 Ga0500559_0018346_1193_2257 354
235 3300053156 Ga0500622_0000890 Ga0500622_0000890_19571_20635 354
236 3300059424 Ga0590075_020434 Ga0590075_020434_215_1291 354

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02653

BPD_transp_2

Branched-chain amino acid transport system / permease component

48

328

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
1l7v-assembly1.cif.gz_B bacterial abc transporter involved in b12 uptake 0.5642 48 330
4dbl-assembly2.cif.gz_F crystal structure of e159q mutant of btucdf 0.5282 22 326
7kyp-assembly4.cif.gz_N psabc from streptococcus pneumoniae in complex with fab 0.5023 42 338
2nq2-assembly1.cif.gz_B an inward-facing conformation of a putative metal-chelate type abc transporter. 0.4974 23 326
1l7v-assembly1.cif.gz_B bacterial abc transporter involved in b12 uptake 0.4834 48 330
ID Description Score Start End Superfamily
af_Q58666_4_320_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.8168 48 332 1.10.3470.10
af_P0AEX7_11_292_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.7452 48 328 1.10.3470.10
af_Q58666_4_320_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.7384 48 332 1.10.3470.10
af_P0AEX7_11_292_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.7381 48 328 1.10.3470.10
af_P77315_52_317_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.7336 50 328 1.10.3470.10
ID Description Score Start End GO Terms
AF-A0A4Y7B8S3-F1-model_v4 deleted 0.9507 25 341
AF-A0A7V9RJL3-F1-model_v4 Branched-chain amino acid ABC transporter permease 0.9412 1 308 GO:0005886
GO:0015658
AF-A0A7V9RJL3-F1-model_v4 Branched-chain amino acid ABC transporter permease 0.9383 1 308 GO:0005886
GO:0015658
AF-A0A519ZA06-F1-model_v4 Branched-chain amino acid ABC transporter permease 0.9375 1 248 GO:0005886
GO:0015658
AF-A0A530Y7E3-F1-model_v4 Branched-chain amino acid ABC transporter permease 0.9344 85 302 GO:0005886
GO:0015658

Feature Viewer

pLDDT pTM Quality
81.37 0.84 High
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Predicted Structure (AlphaFold2)

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