F349016

General Info

Members Datasets Scaffolds Average Seq Length
236 157 472 260

Family's Representative Sequence

Representative Sequence 3300009092|Ga0105250_10144361|Ga0105250_101443611
Length 294
Sequence MCSLPAREGVAKSIAGLAQSDITGPSPSAQGRASRRSNSGVERVSDEARRAFVLHDRALVVDLIELTLNHGLFVVRSATSLVDAEQILADWRPHLSVVDMDHDDSGPLLQLLGASNSLTQSLVPVLGLTRRGDLKTKLRAFDLGVDDILTVPFSPEELLARAIVISRRATGTDRPIIPKITLGEIEIDIVNREVRAGDSIVHLTGIEQSLLYLLASRAGRVVTREEILDAIWGPDFVTESNIVDRHVRSLRVKLQNDYRHPRFIATVPGAGYRFIPTFTNRGWDGADTTPASSS

Samples

Sample ID Description Type Environment
1 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
2 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
30 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
31 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
32 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
33 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
39 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
40 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
41 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
45 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
46 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
47 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
48 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
49 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
54 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
55 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
56 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
59 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
60 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
61 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
62 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
63 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
64 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
65 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
66 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
67 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
68 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
69 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
70 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
99 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
100 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
102 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
105 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
106 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
107 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
108 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
109 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
110 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
111 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
112 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
113 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
114 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
115 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
116 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
117 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
118 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
119 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
120 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
121 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
122 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
123 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
124 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
125 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
126 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
127 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
128 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
129 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
130 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
131 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
132 3300042147 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_080116_2618 Metagenome Rhizosphere
133 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
134 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
135 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
136 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
137 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
138 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
139 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
140 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
141 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
142 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
143 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
144 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
145 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
146 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
147 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
149 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
150 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
151 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
152 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
153 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
154 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
155 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
156 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
157 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.58
Metatranscriptomes 0.42
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.42
Nodule 0
Rhizoplane 5.93
Rhizosphere 93.22
Stem 0
Stem Tuber 0
Unclassified 24.15

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105250_10144361 3300009092 Unclassified 988
2 Ga0058860_11847010 3300004801 Unclassified 1088
3 Ga0070690_100030401 3300005330 Bacteria 3356
4 Ga0070666_10143944 3300005335 Unclassified 1661
5 Ga0070680_100000001 3300005336 Bacteria 276263
6 Ga0068868_100059692 3300005338 Bacteria 3018
7 Ga0070660_100284583 3300005339 Unclassified 1353
8 Ga0070661_100341703 3300005344 Unclassified 1173
9 Ga0070692_10014087 3300005345 Bacteria 3745
10 Ga0070668_100419845 3300005347 Bacteria 1145
11 Ga0070675_100004579 3300005354 Bacteria 10557
12 Ga0070674_100006330 3300005356 Bacteria 6896
13 Ga0070688_100077685 3300005365 Unclassified 2140
14 Ga0070659_100095187 3300005366 Bacteria 2392
15 Ga0070705_100033274 3300005440 Bacteria 2873
16 Ga0070700_100036796 3300005441 Bacteria 2971
17 Ga0070694_100402626 3300005444 Unclassified 1072
18 Ga0070708_100003214 3300005445 Bacteria 12749
19 Ga0070708_100040453 3300005445 Bacteria 4082
20 Ga0070708_100115370 3300005445 Bacteria 2472
21 Ga0070708_100194226 3300005445 Bacteria 1899
22 Ga0070662_100036621 3300005457 Bacteria 3472
23 Ga0070662_100133513 3300005457 Bacteria 1917
24 Ga0070681_10709129 3300005458 Unclassified 922
25 Ga0070685_10006448 3300005466 Bacteria 5986
26 Ga0070706_100005706 3300005467 Bacteria 11837
27 Ga0070706_100014495 3300005467 Bacteria 7282
28 Ga0070707_100000599 3300005468 Bacteria 36185
29 Ga0070707_100002298 3300005468 Bacteria 18263
30 Ga0070707_100004139 3300005468 Bacteria 13600
31 Ga0070707_100054093 3300005468 Bacteria 3848
32 Ga0070698_100007530 3300005471 Bacteria 11774
33 Ga0070698_100024929 3300005471 Bacteria 6234
34 Ga0070698_100087456 3300005471 Unclassified 3102
35 Ga0070698_100193701 3300005471 Bacteria 1970
36 Ga0070699_100000850 3300005518 Bacteria 28324
37 Ga0070699_100015010 3300005518 Bacteria 6657
38 Ga0070699_100017734 3300005518 Bacteria 6113
39 Ga0070699_100385962 3300005518 Bacteria 1265
40 Ga0070684_100365321 3300005535 Unclassified 1328
41 Ga0070697_100019566 3300005536 Bacteria 5348
42 Ga0068853_100158780 3300005539 Unclassified 2039
43 Ga0070672_100022690 3300005543 Bacteria 4615
44 Ga0070686_100233047 3300005544 Bacteria 1337
45 Ga0070695_100014020 3300005545 Bacteria 4826
46 Ga0070696_100008181 3300005546 Bacteria 6998
47 Ga0070696_100039444 3300005546 Bacteria 3261
48 Ga0070696_100055222 3300005546 Bacteria 2769
49 Ga0070696_100319603 3300005546 Bacteria 1194
50 Ga0070704_100074855 3300005549 Bacteria 2471
51 Ga0070704_100251943 3300005549 Bacteria 1450
52 Ga0068855_100379620 3300005563 Unclassified 1552
53 Ga0068855_100981208 3300005563 Bacteria 888
54 Ga0068857_100081041 3300005577 Bacteria 2898
55 Ga0068856_100482107 3300005614 Unclassified 1261
56 Ga0068856_100519437 3300005614 Unclassified 1212
57 Ga0068859_100181714 3300005617 Bacteria 2186
58 Ga0068864_100028620 3300005618 Bacteria 4712
59 Ga0068864_100096426 3300005618 Bacteria 2617
60 Ga0068851_10025716 3300005834 Bacteria 2889
61 Ga0068870_10044782 3300005840 Bacteria 2313
62 Ga0068863_100121128 3300005841 Bacteria 2495
63 Ga0068863_100363085 3300005841 Unclassified 1412
64 Ga0068858_100062057 3300005842 Bacteria 3456
65 Ga0068860_100018625 3300005843 Bacteria 6753
66 Ga0068860_100365253 3300005843 Unclassified 1423
67 Ga0068860_100622300 3300005843 Unclassified 1086
68 Ga0068862_100412345 3300005844 Unclassified 1266
69 Ga0075365_10119582 3300006038 Unclassified 1816
70 Ga0075428_100001325 3300006844 Bacteria 26235
71 Ga0075433_10063864 3300006852 Bacteria 3226
72 Ga0068865_100140350 3300006881 Unclassified 1821
73 Ga0075436_100160387 3300006914 Bacteria 1585
74 Ga0097620_100181715 3300006931 Bacteria 2186
75 Ga0105240_10487076 3300009093 Bacteria 1373
76 Ga0111539_10103855 3300009094 Bacteria 3335
77 Ga0111539_10165554 3300009094 Bacteria 2585
78 Ga0111539_10616222 3300009094 Unclassified 1264
79 Ga0105245_10100349 3300009098 Bacteria 2677
80 Ga0105245_10267582 3300009098 Bacteria 1665
81 Ga0105243_10075926 3300009148 Bacteria 2729
82 Ga0105243_10139306 3300009148 Bacteria 2068
83 Ga0105243_10178475 3300009148 Bacteria 1845
84 Ga0105241_10160320 3300009174 Bacteria 1848
85 Ga0105242_10144366 3300009176 Bacteria 2069
86 Ga0105242_10439872 3300009176 Unclassified 1226
87 Ga0105248_10020300 3300009177 Bacteria 7362
88 Ga0105248_10541719 3300009177 Bacteria 1313
89 Ga0105238_10092284 3300009551 Bacteria 3016
90 Ga0105249_10003799 3300009553 Bacteria 13037
91 Ga0105249_10042507 3300009553 Bacteria 4134
92 Ga0105239_10234445 3300010375 Bacteria 2059
93 Ga0105239_10299788 3300010375 Unclassified 1810
94 Ga0157374_10151172 3300013296 Unclassified 2257
95 Ga0157378_10007754 3300013297 Bacteria 9368
96 Ga0157378_10470652 3300013297 Bacteria 1250
97 Ga0157375_10092880 3300013308 Unclassified 3082
98 Ga0163163_10026692 3300014325 Bacteria 5524
99 Ga0163163_10092803 3300014325 Unclassified 3034
100 Ga0163163_10138906 3300014325 Bacteria 2472
101 Ga0163163_10380197 3300014325 Bacteria 1470
102 Ga0157380_10081125 3300014326 Bacteria 2652
103 Ga0157380_10243997 3300014326 Bacteria 1621
104 Ga0157377_10012849 3300014745 Bacteria 4221
105 Ga0157379_10002175 3300014968 Bacteria 16304
106 Ga0157379_10123957 3300014968 Bacteria 2325
107 Ga0157379_10128583 3300014968 Bacteria 2280
108 Ga0157376_10255002 3300014969 Bacteria 1640
109 Ga0163161_10005304 3300017792 Bacteria 8974
110 Ga0207688_10011853 3300025901 Bacteria 4745
111 Ga0207645_10190115 3300025907 Bacteria 1349
112 Ga0207643_10012353 3300025908 Bacteria 4616
113 Ga0207684_10003076 3300025910 Bacteria 16527
114 Ga0207684_10019183 3300025910 Bacteria 5850
115 Ga0207684_10050150 3300025910 Unclassified 3540
116 Ga0207671_10227878 3300025914 Unclassified 1461
117 Ga0207660_10000001 3300025917 Bacteria 1034169
118 Ga0207660_10129569 3300025917 Bacteria 1919
119 Ga0207662_10001585 3300025918 Bacteria 11136
120 Ga0207662_10127986 3300025918 Unclassified 1598
121 Ga0207649_10154079 3300025920 Unclassified 1586
122 Ga0207646_10003236 3300025922 Bacteria 18580
123 Ga0207646_10004268 3300025922 Bacteria 15611
124 Ga0207646_10005361 3300025922 Bacteria 13504
125 Ga0207646_10009922 3300025922 Bacteria 9364
126 Ga0207646_10081958 3300025922 Bacteria 2885
127 Ga0207646_10475925 3300025922 Bacteria 1126
128 Ga0207687_10188375 3300025927 Unclassified 1604
129 Ga0207690_10063839 3300025932 Bacteria 2512
130 Ga0207690_10147087 3300025932 Bacteria 1743
131 Ga0207706_10011810 3300025933 Bacteria 7954
132 Ga0207706_10258441 3300025933 Unclassified 1521
133 Ga0207709_10041436 3300025935 Bacteria 2763
134 Ga0207709_10138580 3300025935 Bacteria 1669
135 Ga0207709_10205017 3300025935 Bacteria 1411
136 Ga0207709_10219526 3300025935 Unclassified 1370
137 Ga0207669_10114711 3300025937 Unclassified 1814
138 Ga0207691_10034318 3300025940 Bacteria 4718
139 Ga0207691_10248365 3300025940 Bacteria 1536
140 Ga0207689_10127803 3300025942 Bacteria 2090
141 Ga0207689_10504322 3300025942 Unclassified 1014
142 Ga0207712_10035273 3300025961 Bacteria 3397
143 Ga0207712_10046455 3300025961 Bacteria 3011
144 Ga0207668_10083827 3300025972 Bacteria 2321
145 Ga0207668_10458999 3300025972 Bacteria 1089
146 Ga0207658_10315964 3300025986 Unclassified 1351
147 Ga0207677_10039041 3300026023 Unclassified 3118
148 Ga0207703_10122803 3300026035 Unclassified 2231
149 Ga0207678_10041271 3300026067 Bacteria 4001
150 Ga0207708_10039770 3300026075 Bacteria 3585
151 Ga0207641_10100361 3300026088 Bacteria 2549
152 Ga0207648_10006662 3300026089 Bacteria 11462
153 Ga0207676_10094232 3300026095 Bacteria 2467
154 Ga0207674_10015875 3300026116 Bacteria 8254
155 Ga0207675_100193156 3300026118 Bacteria 1953
156 Ga0209999_1008873 3300027543 Bacteria 1819
157 Ga0209998_10001706 3300027717 Bacteria 5242
158 Ga0209974_10093786 3300027876 Bacteria 1043
159 Ga0207428_10294076 3300027907 Unclassified 1203
160 Ga0268265_10380627 3300028380 Unclassified 1298
161 Ga0268264_10309619 3300028381 Unclassified 1490
162 Ga0265337_1019354 3300028556 Bacteria 2147
163 Ga0265319_1007197 3300028563 Bacteria 5040
164 Ga0265319_1053825 3300028563 Bacteria 1321
165 Ga0265334_10009179 3300028573 Bacteria 4190
166 Ga0265318_10042367 3300028577 Bacteria 1727
167 Ga0265318_10095472 3300028577 Bacteria 1095
168 Ga0265322_10007495 3300028654 Bacteria 3184
169 Ga0265338_10103585 3300028800 Bacteria 2311
170 Ga0265324_10008716 3300029957 Bacteria 4007
171 Ga0265324_10052920 3300029957 Bacteria 1394
172 Ga0265324_10115034 3300029957 Bacteria 913
173 Ga0265330_10107625 3300031235 Bacteria 1192
174 Ga0265328_10040235 3300031239 Unclassified 1723
175 Ga0265320_10014704 3300031240 Bacteria 4444
176 Ga0265320_10030103 3300031240 Bacteria 2803
177 Ga0265325_10013628 3300031241 Bacteria 4622
178 Ga0265325_10034442 3300031241 Bacteria 2693
179 Ga0265325_10141262 3300031241 Bacteria 1145
180 Ga0265329_10021063 3300031242 Bacteria 2194
181 Ga0265329_10081309 3300031242 Unclassified 1026
182 Ga0265340_10019952 3300031247 Bacteria 3448
183 Ga0265339_10079645 3300031249 Bacteria 1733
184 Ga0265339_10162075 3300031249 Unclassified 1125
185 Ga0265331_10058265 3300031250 Bacteria 1829
186 Ga0265331_10121702 3300031250 Bacteria 1193
187 Ga0265316_10066384 3300031344 Bacteria 2792
188 Ga0265316_10091288 3300031344 Unclassified 2323
189 Ga0265316_10197676 3300031344 Bacteria 1492
190 Ga0265313_10025153 3300031595 Bacteria 3163
191 Ga0265313_10030392 3300031595 Bacteria 2782
192 Ga0265314_10182848 3300031711 Bacteria 1254
193 Ga0265314_10225991 3300031711 Bacteria 1089
194 Ga0265342_10032631 3300031712 Bacteria 3210
195 Ga0307406_10067978 3300031901 Bacteria 2325
196 Ga0307409_100404833 3300031995 Unclassified 1304
197 Ga0307416_100068684 3300032002 Bacteria 2929
198 Ga0307415_100008306 3300032126 Bacteria 5747
199 Ga0373943_0295209 3300035170 Bacteria 919
200 Ga0373931_0026021 3300035691 Bacteria 2974
201 Ga0373947_0109316 3300035725 Bacteria 1745
202 Ga0395901_0233943 3300038443 Bacteria 1918
203 Ga0395901_0647911 3300038443 Unclassified 1060
204 Ga0439465_0081763 3300041413 Bacteria 1096
205 Ga0450910_008000 3300042147 Unclassified 1483
206 Ga0439434_0077443 3300042435 Bacteria 1052
207 Ga0451577_0287850 3300042876 Bacteria 1489
208 Ga0495618_0208370 3300046514 Unclassified 1236
209 Ga0495640_0264422 3300046533 Unclassified 1074
210 Ga0495634_0093801 3300046642 Bacteria 1946
211 Ga0495674_0279441 3300047319 Unclassified 1368
212 Ga0496102_0002095 3300048905 Bacteria 17174
213 Ga0496102_0872678 3300048905 Unclassified 822
214 Ga0496103_0017457 3300048906 Bacteria 4294
215 Ga0496103_0122888 3300048906 Bacteria 1654
216 Ga0496106_0404031 3300048909 Bacteria 1098
217 Ga0496107_0358695 3300048910 Unclassified 1085
218 Ga0496108_0044884 3300048911 Bacteria 3690
219 Ga0496108_0093875 3300048911 Bacteria 2553
220 Ga0496108_0367616 3300048911 Bacteria 1256
221 Ga0496109_0176631 3300048912 Bacteria 2005
222 Ga0496109_0266625 3300048912 Unclassified 1613
223 Ga0496112_0000005 3300048915 Bacteria 525541
224 Ga0496112_0000069 3300048915 Bacteria 68177
225 Ga0496113_0016298 3300048916 Bacteria 5131
226 Ga0501040_0081132 3300049576 Unclassified 2248
227 Ga0501067_0051241 3300049583 Bacteria 2288
228 Ga0501068_0023262 3300049584 Bacteria 3630
229 Ga0501069_0064326 3300049585 Bacteria 2050
230 nmdc:mga08y16_200672_c1 3300050511 Bacteria 2067
231 nmdc:mga0n895_164637_c1 3300050512 Bacteria 2249
232 Ga0495601_0048163 3300053077 Bacteria 2684
233 Ga0495612_0035981 3300053078 Bacteria 2008
234 Ga0495595_0007318 3300053084 Bacteria 4518
235 Ga0495619_0199105 3300053085 Unclassified 1386
236 Ga0501082_0144551 3300060353 Unclassified 2064
237 Ga0105250_10144361
238 Ga0058860_11847010
239 Ga0070690_100030401
240 Ga0070666_10143944
241 Ga0070680_100000001
242 Ga0068868_100059692
243 Ga0070660_100284583
244 Ga0070661_100341703
245 Ga0070692_10014087
246 Ga0070668_100419845
247 Ga0070675_100004579
248 Ga0070674_100006330
249 Ga0070688_100077685
250 Ga0070659_100095187
251 Ga0070705_100033274
252 Ga0070700_100036796
253 Ga0070694_100402626
254 Ga0070708_100003214
255 Ga0070708_100040453
256 Ga0070708_100115370
257 Ga0070708_100194226
258 Ga0070662_100036621
259 Ga0070662_100133513
260 Ga0070681_10709129
261 Ga0070685_10006448
262 Ga0070706_100005706
263 Ga0070706_100014495
264 Ga0070707_100000599
265 Ga0070707_100002298
266 Ga0070707_100004139
267 Ga0070707_100054093
268 Ga0070698_100007530
269 Ga0070698_100024929
270 Ga0070698_100087456
271 Ga0070698_100193701
272 Ga0070699_100000850
273 Ga0070699_100015010
274 Ga0070699_100017734
275 Ga0070699_100385962
276 Ga0070684_100365321
277 Ga0070697_100019566
278 Ga0068853_100158780
279 Ga0070672_100022690
280 Ga0070686_100233047
281 Ga0070695_100014020
282 Ga0070696_100008181
283 Ga0070696_100039444
284 Ga0070696_100055222
285 Ga0070696_100319603
286 Ga0070704_100074855
287 Ga0070704_100251943
288 Ga0068855_100379620
289 Ga0068855_100981208
290 Ga0068857_100081041
291 Ga0068856_100482107
292 Ga0068856_100519437
293 Ga0068859_100181714
294 Ga0068864_100028620
295 Ga0068864_100096426
296 Ga0068851_10025716
297 Ga0068870_10044782
298 Ga0068863_100121128
299 Ga0068863_100363085
300 Ga0068858_100062057
301 Ga0068860_100018625
302 Ga0068860_100365253
303 Ga0068860_100622300
304 Ga0068862_100412345
305 Ga0075365_10119582
306 Ga0075428_100001325
307 Ga0075433_10063864
308 Ga0068865_100140350
309 Ga0075436_100160387
310 Ga0097620_100181715
311 Ga0105240_10487076
312 Ga0111539_10103855
313 Ga0111539_10165554
314 Ga0111539_10616222
315 Ga0105245_10100349
316 Ga0105245_10267582
317 Ga0105243_10075926
318 Ga0105243_10139306
319 Ga0105243_10178475
320 Ga0105241_10160320
321 Ga0105242_10144366
322 Ga0105242_10439872
323 Ga0105248_10020300
324 Ga0105248_10541719
325 Ga0105238_10092284
326 Ga0105249_10003799
327 Ga0105249_10042507
328 Ga0105239_10234445
329 Ga0105239_10299788
330 Ga0157374_10151172
331 Ga0157378_10007754
332 Ga0157378_10470652
333 Ga0157375_10092880
334 Ga0163163_10026692
335 Ga0163163_10092803
336 Ga0163163_10138906
337 Ga0163163_10380197
338 Ga0157380_10081125
339 Ga0157380_10243997
340 Ga0157377_10012849
341 Ga0157379_10002175
342 Ga0157379_10123957
343 Ga0157379_10128583
344 Ga0157376_10255002
345 Ga0163161_10005304
346 Ga0207688_10011853
347 Ga0207645_10190115
348 Ga0207643_10012353
349 Ga0207684_10003076
350 Ga0207684_10019183
351 Ga0207684_10050150
352 Ga0207671_10227878
353 Ga0207660_10000001
354 Ga0207660_10129569
355 Ga0207662_10001585
356 Ga0207662_10127986
357 Ga0207649_10154079
358 Ga0207646_10003236
359 Ga0207646_10004268
360 Ga0207646_10005361
361 Ga0207646_10009922
362 Ga0207646_10081958
363 Ga0207646_10475925
364 Ga0207687_10188375
365 Ga0207690_10063839
366 Ga0207690_10147087
367 Ga0207706_10011810
368 Ga0207706_10258441
369 Ga0207709_10041436
370 Ga0207709_10138580
371 Ga0207709_10205017
372 Ga0207709_10219526
373 Ga0207669_10114711
374 Ga0207691_10034318
375 Ga0207691_10248365
376 Ga0207689_10127803
377 Ga0207689_10504322
378 Ga0207712_10035273
379 Ga0207712_10046455
380 Ga0207668_10083827
381 Ga0207668_10458999
382 Ga0207658_10315964
383 Ga0207677_10039041
384 Ga0207703_10122803
385 Ga0207678_10041271
386 Ga0207708_10039770
387 Ga0207641_10100361
388 Ga0207648_10006662
389 Ga0207676_10094232
390 Ga0207674_10015875
391 Ga0207675_100193156
392 Ga0209999_1008873
393 Ga0209998_10001706
394 Ga0209974_10093786
395 Ga0207428_10294076
396 Ga0268265_10380627
397 Ga0268264_10309619
398 Ga0265337_1019354
399 Ga0265319_1007197
400 Ga0265319_1053825
401 Ga0265334_10009179
402 Ga0265318_10042367
403 Ga0265318_10095472
404 Ga0265322_10007495
405 Ga0265338_10103585
406 Ga0265324_10008716
407 Ga0265324_10052920
408 Ga0265324_10115034
409 Ga0265330_10107625
410 Ga0265328_10040235
411 Ga0265320_10014704
412 Ga0265320_10030103
413 Ga0265325_10013628
414 Ga0265325_10034442
415 Ga0265325_10141262
416 Ga0265329_10021063
417 Ga0265329_10081309
418 Ga0265340_10019952
419 Ga0265339_10079645
420 Ga0265339_10162075
421 Ga0265331_10058265
422 Ga0265331_10121702
423 Ga0265316_10066384
424 Ga0265316_10091288
425 Ga0265316_10197676
426 Ga0265313_10025153
427 Ga0265313_10030392
428 Ga0265314_10182848
429 Ga0265314_10225991
430 Ga0265342_10032631
431 Ga0307406_10067978
432 Ga0307409_100404833
433 Ga0307416_100068684
434 Ga0307415_100008306
435 Ga0373943_0295209
436 Ga0373931_0026021
437 Ga0373947_0109316
438 Ga0395901_0233943
439 Ga0395901_0647911
440 Ga0439465_0081763
441 Ga0450910_008000
442 Ga0439434_0077443
443 Ga0451577_0287850
444 Ga0495618_0208370
445 Ga0495640_0264422
446 Ga0495634_0093801
447 Ga0495674_0279441
448 Ga0496102_0002095
449 Ga0496102_0872678
450 Ga0496103_0017457
451 Ga0496103_0122888
452 Ga0496106_0404031
453 Ga0496107_0358695
454 Ga0496108_0044884
455 Ga0496108_0093875
456 Ga0496108_0367616
457 Ga0496109_0176631
458 Ga0496109_0266625
459 Ga0496112_0000005
460 Ga0496112_0000069
461 Ga0496113_0016298
462 Ga0501040_0081132
463 Ga0501067_0051241
464 Ga0501068_0023262
465 Ga0501069_0064326
466 nmdc:mga08y16_200672_c1
467 nmdc:mga0n895_164637_c1
468 Ga0495601_0048163
469 Ga0495612_0035981
470 Ga0495595_0007318
471 Ga0495619_0199105
472 Ga0501082_0144551

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00486

Trans_reg_C

Transcriptional regulatory protein, C terminal

197

274

0.97

PF00072

Response_reg

Response regulator receiver domain

51

163

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
1nxt-assembly1.cif.gz_A-2 micarec ph 4.0 0.9264 22 143
1nxt-assembly1.cif.gz_A-2 micarec ph 4.0 0.9188 22 143
2a9r-assembly1.cif.gz_A-2 rr02-rec phosphate in the active site 0.9086 22 143
2zxj-assembly2.cif.gz_B crystal structure of yycf dna-binding domain from staphylococcus aureus 0.9047 153 250
1nxx-assembly1.cif.gz_A-2 micarec ph 5.5 0.9047 22 143
ID Description Score Start End Superfamily
af_O14002_2159_2304_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9074 21 139 3.40.50.2300
af_P0DMC5_826_949_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.904 24 142 3.40.50.2300
af_Q9SXL4_1031_1196_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9001 22 139 3.40.50.2300
1nxoA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8999 22 142 3.40.50.2300
af_Q551X9_923_1049_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8951 19 135 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A3A9C601-F1-model_v4 Winged helix family transcriptional regulator 0.9073 153 249 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A1F9X0Y8-F1-model_v4 Diguanylate cyclase 0.9027 20 142 GO:0000160
GO:0003677
AF-A0A850BJV9-F1-model_v4 Response regulator 0.8989 23 142 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A317HTM1-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.8972 22 142 GO:0000155
GO:0006355
AF-A0A7S6M368-F1-model_v4 Response regulator 0.8945 21 142 GO:0000160
GO:0016787

Map