F348509

General Info

Members Datasets Scaffolds Average Seq Length
235 155 225 397

Family's Representative Sequence

Representative Sequence 3300048917|Ga0496114_0015801|Ga0496114_0015801_3746_5071
Length 441
Sequence VGGHWHHLETVARAASSTSGGRLSARAARFADVRSKPLTSISQAQARRIALAAQGFLDPPHEPPTMRTLARTLGRTGVLQVDSVNVLQRAHYMPLYSRMGPYDVDLVRRAAETSPRRMVEYWAHVQAYMPVDLWPVMRHRMARYRDGKHKWWGSVVTDELTDSLLLEISDRGASTARDLDDGLPRKKDHWGWNWSTTRRALDYLFMVGEVAIAGRNSQFEIRYDLPERVIPRVHLEAPTPSEADATRELVRRAARSHGVATARDLADYYRMRQQPKPGVGSAQDAVLELVEDGELLPVTVEGVRRPAYLHRDARLPRRIGARALLSPFDPVVWERERTEALFDFHYRIEIYTPPEKRIHGYYVLPFLLGDRIVGRVDLKADRRTGLLLVKGVYAEHCTPPETAEELAAELERLAGWLGLHTVVVEPRGDLAPALSVAVAAR

Samples

Sample ID Description Type Environment
1 2643221550 Mesorhizobium sp. Root552 Isolate Unclassified
2 2643221561 Nocardioides sp. Root151 Isolate Unclassified
3 2643221564 Mesorhizobium sp. Root157 Isolate Unclassified
4 2643221696 Nocardioides sp. Root140 Isolate Unclassified
5 2739367898 Nocardioides sp. CF479 Isolate Unclassified
6 2842888712 Tsukamurella sp. R-71941 Isolate Unclassified
7 2881845957 Mesorhizobium sp. M4B.F.Ca.ET.019.03.1.1 Isolate Nodule
8 2885342637 Mesorhizobium sp. M4A.F.Ca.ET.050.02.1.1 Isolate Nodule
9 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
10 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
11 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
12 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
13 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
14 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
15 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
16 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
17 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
18 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
19 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
20 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
21 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
22 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
23 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
30 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
31 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
38 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
39 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
40 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
41 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
42 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
43 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
44 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
57 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
58 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
59 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
60 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
61 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
62 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
63 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
64 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
65 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
66 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
89 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
91 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
92 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
93 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
94 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
95 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
96 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
97 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
98 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
99 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
100 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
101 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
102 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
103 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
104 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
105 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
106 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
107 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
108 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
109 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
110 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
111 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
112 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
113 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
114 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
115 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
116 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
117 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
118 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
119 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
133 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
134 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
135 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
136 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
137 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
138 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
139 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
140 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
141 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
143 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
144 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
145 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
146 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
147 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
148 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
149 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
150 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
151 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
152 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
153 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
154 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
155 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.74
Metatranscriptomes 0
Isolates 4.26

Biome Distribution

Category Percentage (%)
Aerial Root 0.85
Bulb 0
Endosphere 14.04
Nodule 0.85
Rhizoplane 11.91
Rhizosphere 68.94
Stem 0
Stem Tuber 0
Unclassified 3.4

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 LJQas_1000795 3300000549 Bacteria 4978
2 JGI25165J46597_1000015 3300003214 Bacteria 380891
3 Ga0070658_10114557 3300005327 Bacteria 2236
4 Ga0070683_100000255 3300005329 Bacteria 36630
5 Ga0070683_100067282 3300005329 Bacteria 3337
6 Ga0070670_100028941 3300005331 Bacteria 4769
7 Ga0070680_100169184 3300005336 Bacteria 1838
8 Ga0070682_100001807 3300005337 Bacteria 11949
9 Ga0070682_100032587 3300005337 Bacteria 3161
10 Ga0070682_100066162 3300005337 Bacteria 2299
11 Ga0070660_100066167 3300005339 Bacteria 2813
12 Ga0070691_10080632 3300005341 Bacteria 1593
13 Ga0070687_100144049 3300005343 Bacteria 1391
14 Ga0070692_10001241 3300005345 Bacteria 9102
15 Ga0070675_100033213 3300005354 Bacteria 4182
16 Ga0070700_100002077 3300005441 Bacteria 10175
17 Ga0070681_10334179 3300005458 Bacteria 1425
18 Ga0070685_10008462 3300005466 Bacteria 5289
19 Ga0070679_100071642 3300005530 Bacteria 3457
20 Ga0070684_100003473 3300005535 Bacteria 11827
21 Ga0070684_100133528 3300005535 Bacteria 2240
22 Ga0068853_100016252 3300005539 Bacteria 6124
23 Ga0068853_100049770 3300005539 Bacteria 3602
24 Ga0070672_100003744 3300005543 Bacteria 9901
25 Ga0070686_100037007 3300005544 Bacteria 3025
26 Ga0070665_100139639 3300005548 Bacteria 2426
27 Ga0068856_100137818 3300005614 Bacteria 2446
28 Ga0070702_100012683 3300005615 Bacteria 4233
29 Ga0068852_100020901 3300005616 Bacteria 5211
30 Ga0068861_100003139 3300005719 Bacteria 10921
31 Ga0068858_100020464 3300005842 Bacteria 6185
32 Ga0075365_10003641 3300006038 Bacteria 7988
33 Ga0075365_10003781 3300006038 Bacteria 7887
34 Ga0075365_10105203 3300006038 Bacteria 1935
35 Ga0075365_10109870 3300006038 Bacteria 1894
36 Ga0075365_10141598 3300006038 Bacteria 1669
37 Ga0075368_10002311 3300006042 Bacteria 6190
38 Ga0075363_100010942 3300006048 Bacteria 4328
39 Ga0075364_10013616 3300006051 Bacteria 5006
40 Ga0075364_10076174 3300006051 Bacteria 2214
41 Ga0075364_10101904 3300006051 Bacteria 1911
42 Ga0075362_10002324 3300006177 Bacteria 6357
43 Ga0075367_10006839 3300006178 Bacteria 5798
44 Ga0075367_10011780 3300006178 Bacteria 4641
45 Ga0075367_10101359 3300006178 Bacteria 1760
46 Ga0075369_10017105 3300006186 Bacteria 2934
47 Ga0075370_10042049 3300006353 Bacteria 2581
48 Ga0075428_100180917 3300006844 Bacteria 2282
49 Ga0068865_100012448 3300006881 Bacteria 5355
50 Ga0105240_10175275 3300009093 Bacteria 2535
51 Ga0111539_10126379 3300009094 Bacteria 2996
52 Ga0111539_10238644 3300009094 Bacteria 2116
53 Ga0105245_10018805 3300009098 Bacteria 6045
54 Ga0105245_10038456 3300009098 Bacteria 4257
55 Ga0105243_10003624 3300009148 Bacteria 12440
56 Ga0105248_10182632 3300009177 Bacteria 2364
57 Ga0105237_10067101 3300009545 Bacteria 3582
58 Ga0105238_10110723 3300009551 Bacteria 2726
59 Ga0105249_10022303 3300009553 Bacteria 5672
60 Ga0105249_10162948 3300009553 Bacteria 2156
61 Ga0105239_10008658 3300010375 Bacteria 11532
62 Ga0105239_10119795 3300010375 Bacteria 2922
63 Ga0105246_10001851 3300011119 Bacteria 12708
64 Ga0157369_10231658 3300013105 Bacteria 1931
65 Ga0157369_10237409 3300013105 Bacteria 1904
66 Ga0163162_10026380 3300013306 Bacteria 5742
67 Ga0157372_10005079 3300013307 Bacteria 13992
68 Ga0157372_10028357 3300013307 Bacteria 6108
69 Ga0157375_10024687 3300013308 Bacteria 5568
70 Ga0163163_10034893 3300014325 Bacteria 4876
71 Ga0163163_10042034 3300014325 Bacteria 4474
72 Ga0157380_10079725 3300014326 Bacteria 2674
73 Ga0157377_10014159 3300014745 Bacteria 4053
74 Ga0209233_1000010 3300025261 Bacteria 1194329
75 Ga0209758_1007725 3300025297 Bacteria 7213
76 Ga0207647_10041550 3300025904 Bacteria 2890
77 Ga0207643_10012375 3300025908 Bacteria 4612
78 Ga0207705_10067574 3300025909 Bacteria 2587
79 Ga0207707_10035239 3300025912 Bacteria 4377
80 Ga0207694_10037735 3300025924 Bacteria 3713
81 Ga0207650_10018390 3300025925 Bacteria 4905
82 Ga0207687_10008992 3300025927 Bacteria 6529
83 Ga0207690_10045734 3300025932 Bacteria 2894
84 Ga0207709_10037040 3300025935 Bacteria 2896
85 Ga0207704_10044531 3300025938 Bacteria 2630
86 Ga0207691_10004377 3300025940 Bacteria 13694
87 Ga0207661_10009834 3300025944 Bacteria 6869
88 Ga0207679_10224808 3300025945 Bacteria 1581
89 Ga0207667_10322049 3300025949 Bacteria 1579
90 Ga0207651_10052133 3300025960 Bacteria 2788
91 Ga0207703_10119277 3300026035 Bacteria 2262
92 Ga0207639_10102350 3300026041 Bacteria 2318
93 Ga0207708_10003699 3300026075 Bacteria 11291
94 Ga0207648_10019909 3300026089 Bacteria 6057
95 Ga0207674_10005034 3300026116 Bacteria 15778
96 Ga0207675_100001267 3300026118 Bacteria 25253
97 Ga0207698_10279629 3300026142 Bacteria 1543
98 Ga0207428_10081409 3300027907 Bacteria 2528
99 Ga0207428_10145014 3300027907 Bacteria 1810
100 Ga0268266_10016874 3300028379 Bacteria 6239
101 Ga0307407_10077636 3300031903 Bacteria 1998
102 Ga0307409_100057081 3300031995 Bacteria 3023
103 Ga0307409_100103197 3300031995 Bacteria 2371
104 Ga0307416_100197638 3300032002 Bacteria 1904
105 Ga0307416_100354986 3300032002 Bacteria 1485
106 Ga0307411_10031129 3300032005 Bacteria 3279
107 Ga0395900_0020536 3300037418 Bacteria 6743
108 Ga0395900_0141453 3300037418 Bacteria 2464
109 Ga0395900_0259308 3300037418 Bacteria 1737
110 Ga0395901_0032188 3300038443 Bacteria 5412
111 Ga0395901_0038750 3300038443 Bacteria 4930
112 Ga0395901_0339825 3300038443 Bacteria 1551
113 Ga0436360_1149986 3300039438 Bacteria 2599
114 Ga0466972_0009153 3300044658 Bacteria 4973
115 Ga0466972_0034251 3300044658 Bacteria 2489
116 Ga0466965_0012812 3300044683 Bacteria 3947
117 Ga0466970_0007068 3300044765 Bacteria 5615
118 Ga0466970_0100186 3300044765 Bacteria 1577
119 Ga0466957_0014562 3300044842 Bacteria 4580
120 Ga0466957_0073470 3300044842 Bacteria 2119
121 Ga0466960_0060677 3300044901 Bacteria 1854
122 Ga0466967_0003180 3300045976 Bacteria 10592
123 Ga0466967_0016568 3300045976 Bacteria 5818
124 Ga0466967_0057303 3300045976 Bacteria 3439
125 Ga0466967_0065487 3300045976 Bacteria 3234
126 Ga0466967_0094792 3300045976 Bacteria 2719
127 Ga0495582_0154848 3300046473 Bacteria 1302
128 Ga0495657_0087803 3300046675 Bacteria 2001
129 Ga0496100_0019234 3300048903 Bacteria 4070
130 Ga0496100_0065911 3300048903 Bacteria 2401
131 Ga0496101_0015943 3300048904 Bacteria 5070
132 Ga0496101_0069456 3300048904 Bacteria 2577
133 Ga0496102_0019509 3300048905 Bacteria 5972
134 Ga0496102_0042708 3300048905 Bacteria 4109
135 Ga0496102_0117119 3300048905 Bacteria 2486
136 Ga0496102_0278074 3300048905 Bacteria 1578
137 Ga0496104_0130394 3300048907 Bacteria 2415
138 Ga0496105_0155597 3300048908 Bacteria 1877
139 Ga0496106_0081529 3300048909 Bacteria 2486
140 Ga0496107_0020780 3300048910 Bacteria 4639
141 Ga0496107_0156897 3300048910 Bacteria 1685
142 Ga0496109_0014107 3300048912 Bacteria 6945
143 Ga0496109_0017927 3300048912 Bacteria 6215
144 Ga0496109_0051412 3300048912 Bacteria 3753
145 Ga0496109_0324800 3300048912 Bacteria 1452
146 Ga0496110_0015366 3300048913 Bacteria 6369
147 Ga0496110_0355926 3300048913 Bacteria 1334
148 Ga0496111_0012655 3300048914 Bacteria 5718
149 Ga0496114_0000249 3300048917 Bacteria 39187
150 Ga0496114_0000460 3300048917 Bacteria 29879
151 Ga0496114_0006646 3300048917 Bacteria 9111
152 Ga0496114_0015801 3300048917 Bacteria 6074
153 Ga0496114_0076393 3300048917 Bacteria 2822
154 Ga0496115_0008070 3300048918 Bacteria 7777
155 Ga0496115_0051035 3300048918 Bacteria 3316
156 Ga0496115_0079371 3300048918 Bacteria 2671
157 Ga0496120_0000621 3300048923 Bacteria 53511
158 Ga0496126_0047824 3300048929 Bacteria 3915
159 Ga0501031_0063039 3300049568 Bacteria 2415
160 Ga0501031_0136763 3300049568 Bacteria 1601
161 Ga0501032_0029983 3300049569 Bacteria 3731
162 Ga0501032_0054118 3300049569 Bacteria 2702
163 Ga0501033_0029862 3300049570 Bacteria 4097
164 Ga0501033_0111951 3300049570 Bacteria 1986
165 Ga0501034_0018872 3300049571 Bacteria 7065
166 Ga0501036_0016275 3300049572 Bacteria 6212
167 Ga0501036_0049964 3300049572 Bacteria 3542
168 Ga0501037_0007263 3300049573 Bacteria 8097
169 Ga0501038_0001498 3300049574 Bacteria 21504
170 Ga0501039_0012031 3300049575 Bacteria 6594
171 Ga0501039_0112549 3300049575 Bacteria 2128
172 Ga0501039_0177724 3300049575 Bacteria 1674
173 Ga0501042_0034424 3300049578 Bacteria 3592
174 Ga0501042_0112462 3300049578 Bacteria 1961
175 Ga0501043_0005773 3300049579 Bacteria 9964
176 Ga0501046_0000573 3300049580 Bacteria 36317
177 Ga0501046_0004929 3300049580 Bacteria 12008
178 Ga0501047_0064673 3300049581 Bacteria 3527
179 Ga0501047_0231543 3300049581 Bacteria 1701
180 Ga0501048_0015336 3300049582 Bacteria 5658
181 Ga0501067_0005590 3300049583 Bacteria 6972
182 Ga0501067_0006871 3300049583 Bacteria 6312
183 Ga0501068_0028067 3300049584 Bacteria 3325
184 Ga0501069_0071515 3300049585 Bacteria 1944
185 Ga0501069_0079877 3300049585 Bacteria 1841
186 Ga0501069_0110510 3300049585 Bacteria 1565
187 Ga0501069_0143405 3300049585 Bacteria 1371
188 Ga0501070_0006648 3300049586 Bacteria 9845
189 Ga0501070_0009499 3300049586 Bacteria 8221
190 Ga0501070_0023686 3300049586 Bacteria 5144
191 Ga0501070_0120267 3300049586 Bacteria 2170
192 Ga0501073_0012556 3300049589 Bacteria 6182
193 Ga0501074_0004426 3300049590 Bacteria 10045
194 Ga0501077_0023881 3300049593 Bacteria 3878
195 Ga0501077_0102181 3300049593 Bacteria 1816
196 Ga0501079_0003382 3300049741 Bacteria 11707
197 Ga0501079_0077732 3300049741 Bacteria 2567
198 Ga0501080_0001653 3300049742 Bacteria 18957
199 Ga0501080_0017882 3300049742 Bacteria 6562
200 Ga0501035_0013377 3300049822 Bacteria 7575
201 Ga0501035_0048613 3300049822 Bacteria 3804
202 Ga0501044_0022299 3300049823 Bacteria 6748
203 Ga0501044_0148152 3300049823 Bacteria 2330
204 nmdc:mga03683_16229_c1 3300050489 Bacteria 2793
205 nmdc:mga03n38_51647_c1 3300050490 Bacteria 1837
206 nmdc:mga00v17_150439_c1 3300050491 Bacteria 1496
207 nmdc:mga00v17_29909_c1 3300050491 Bacteria 3199
208 nmdc:mga00v17_5705_c1 3300050491 Bacteria 6577
209 nmdc:mga00v17_57821_c1 3300050491 Bacteria 2373
210 nmdc:mga0yw44_2844_c1 3300050492 Bacteria 7519
211 nmdc:mga0yw44_30368_c1 3300050492 Bacteria 3130
212 nmdc:mga0yw44_7626_c1 3300050492 Bacteria 5335
213 nmdc:mga0yw44_91029_c1 3300050492 Bacteria 1928
214 nmdc:mga06z11_49881_c1 3300050494 Bacteria 2137
215 nmdc:mga07m45_10169_c1 3300050496 Bacteria 4906
216 nmdc:mga08y16_20409_c1 3300050511 Bacteria 6994
217 Ga0495619_0016627 3300053085 Bacteria 4657
218 Ga0495619_0245892 3300053085 Bacteria 1240
219 Ga0500644_0000470 3300053088 Bacteria 17869
220 Ga0500568_0000017 3300053139 Bacteria 197578
221 Ga0501084_0011193 3300054114 Bacteria 7432
222 Ga0501084_0222158 3300054114 Bacteria 1594
223 Ga0501082_0004748 3300060353 Bacteria 11855
224 Ga0501082_0019877 3300060353 Bacteria 5790
225 Ga0466962_0120016 3300061719 Bacteria 1268

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2885342637 2885343209 313
2 iso_pu_bacteria 2881845957 2881846918 322
3 3300050491 nmdc:mga00v17_150439_c1 nmdc:mga00v17_150439_c1_10_1032 337
4 iso_pu_bacteria 2842888712 2842890301 362
5 3300006038 Ga0075365_10141598 Ga0075365_101415982 364
6 3300006178 Ga0075367_10011780 Ga0075367_100117804 364
7 3300006186 Ga0075369_10017105 Ga0075369_100171053 364
8 3300050491 nmdc:mga00v17_29909_c1 nmdc:mga00v17_29909_c1_1228_2331 364
9 3300050492 nmdc:mga0yw44_30368_c1 nmdc:mga0yw44_30368_c1_232_1335 364
10 3300050492 nmdc:mga0yw44_7626_c1 nmdc:mga0yw44_7626_c1_3428_4627 364
11 3300044765 Ga0466970_0007068 Ga0466970_0007068_976_2235 365
12 3300044901 Ga0466960_0060677 Ga0466960_0060677_471_1730 365
13 3300009553 Ga0105249_10162948 Ga0105249_101629482 368
14 3300011119 Ga0105246_10001851 Ga0105246_100018512 368
15 3300014325 Ga0163163_10042034 Ga0163163_100420342 368
16 3300045976 Ga0466967_0016568 Ga0466967_0016568_281_1405 368
17 3300046473 Ga0495582_0154848 Ga0495582_0154848_130_1254 368
18 3300049586 Ga0501070_0009499 Ga0501070_0009499_4054_5178 368
19 3300032002 Ga0307416_100197638 Ga0307416_1001976382 369
20 3300048913 Ga0496110_0355926 Ga0496110_0355926_21_1151 370
21 3300003214 JGI25165J46597_1000015 JGI25165J46597_10000153 372
22 3300005539 Ga0068853_100049770 Ga0068853_1000497703 372
23 3300005614 Ga0068856_100137818 Ga0068856_1001378183 372
24 3300009093 Ga0105240_10175275 Ga0105240_101752752 372
25 3300009545 Ga0105237_10067101 Ga0105237_100671012 372
26 3300009551 Ga0105238_10110723 Ga0105238_101107232 372
27 3300010375 Ga0105239_10119795 Ga0105239_101197953 372
28 3300025261 Ga0209233_1000010 Ga0209233_1000010102 372
29 3300025297 Ga0209758_1007725 Ga0209758_10077255 372
30 3300025904 Ga0207647_10041550 Ga0207647_100415502 372
31 3300025924 Ga0207694_10037735 Ga0207694_100377353 372
32 3300026041 Ga0207639_10102350 Ga0207639_101023503 372
33 3300037418 Ga0395900_0020536 Ga0395900_0020536_4909_6108 372
34 3300038443 Ga0395901_0339825 Ga0395901_0339825_187_1386 372
35 3300048905 Ga0496102_0278074 Ga0496102_0278074_353_1552 372
36 3300048929 Ga0496126_0047824 Ga0496126_0047824_2079_3278 372
37 3300044658 Ga0466972_0009153 Ga0466972_0009153_659_1858 373
38 3300045976 Ga0466967_0003180 Ga0466967_0003180_2807_3928 373
39 3300038443 Ga0395901_0032188 Ga0395901_0032188_1115_2314 374
40 3300037418 Ga0395900_0259308 Ga0395900_0259308_300_1499 375
41 3300048923 Ga0496120_0000621 Ga0496120_0000621_46418_47617 375
42 3300006038 Ga0075365_10109870 Ga0075365_101098702 376
43 3300025949 Ga0207667_10322049 Ga0207667_103220491 376
44 3300037418 Ga0395900_0141453 Ga0395900_0141453_928_2127 376
45 3300044765 Ga0466970_0100186 Ga0466970_0100186_235_1440 377
46 3300044842 Ga0466957_0073470 Ga0466957_0073470_533_1738 377
47 3300044842 Ga0466957_0014562 Ga0466957_0014562_584_1786 379
48 3300061719 Ga0466962_0120016 Ga0466962_0120016_54_1256 379
49 3300044683 Ga0466965_0012812 Ga0466965_0012812_2302_3504 382
50 3300049585 Ga0501069_0071515 Ga0501069_0071515_266_1462 382
51 3300049585 Ga0501069_0079877 Ga0501069_0079877_552_1772 384
52 3300039438 Ga0436360_1149986 Ga0436360_1149986_42_1250 385
53 3300048905 Ga0496102_0117119 Ga0496102_0117119_1080_2294 385
54 3300048910 Ga0496107_0156897 Ga0496107_0156897_173_1387 385
55 3300048917 Ga0496114_0006646 Ga0496114_0006646_2398_3612 385
56 3300005331 Ga0070670_100028941 Ga0070670_1000289412 386
57 3300025925 Ga0207650_10018390 Ga0207650_100183902 386
58 3300053085 Ga0495619_0245892 Ga0495619_0245892_19_1200 386
59 3300038443 Ga0395901_0038750 Ga0395901_0038750_977_2191 388
60 iso_pu_bacteria 2643221550 2643773064 388
61 3300005466 Ga0070685_10008462 Ga0070685_100084627 389
62 3300005337 Ga0070682_100001807 Ga0070682_10000180710 391
63 3300005337 Ga0070682_100032587 Ga0070682_1000325872 391
64 3300009094 Ga0111539_10126379 Ga0111539_101263793 391
65 3300027907 Ga0207428_10145014 Ga0207428_101450141 391
66 3300048903 Ga0496100_0019234 Ga0496100_0019234_2514_3713 391
67 3300048903 Ga0496100_0065911 Ga0496100_0065911_1041_2255 391
68 3300048904 Ga0496101_0015943 Ga0496101_0015943_3219_4418 391
69 3300048908 Ga0496105_0155597 Ga0496105_0155597_344_1558 391
70 3300048917 Ga0496114_0000249 Ga0496114_0000249_6429_7628 391
71 3300048918 Ga0496115_0008070 Ga0496115_0008070_6563_7762 391
72 3300049581 Ga0501047_0231543 Ga0501047_0231543_323_1558 391
73 3300049583 Ga0501067_0006871 Ga0501067_0006871_4007_5242 391
74 3300049584 Ga0501068_0028067 Ga0501068_0028067_146_1381 391
75 3300049586 Ga0501070_0120267 Ga0501070_0120267_765_2000 391
76 3300049590 Ga0501074_0004426 Ga0501074_0004426_2379_3614 391
77 3300049593 Ga0501077_0102181 Ga0501077_0102181_177_1412 391
78 3300049741 Ga0501079_0003382 Ga0501079_0003382_2003_3238 391
79 3300049742 Ga0501080_0001653 Ga0501080_0001653_9221_10456 391
80 3300054114 Ga0501084_0222158 Ga0501084_0222158_222_1457 391
81 3300060353 Ga0501082_0004748 Ga0501082_0004748_2177_3412 391
82 iso_pu_bacteria 2643221564 2643839723 391
83 3300006038 Ga0075365_10003641 Ga0075365_100036414 392
84 3300006042 Ga0075368_10002311 Ga0075368_100023111 392
85 3300006048 Ga0075363_100010942 Ga0075363_1000109422 392
86 3300006051 Ga0075364_10013616 Ga0075364_100136165 392
87 3300006051 Ga0075364_10076174 Ga0075364_100761742 392
88 3300006051 Ga0075364_10101904 Ga0075364_101019042 392
89 3300006177 Ga0075362_10002324 Ga0075362_100023243 392
90 3300006178 Ga0075367_10006839 Ga0075367_100068396 392
91 3300006178 Ga0075367_10101359 Ga0075367_101013592 392
92 3300006353 Ga0075370_10042049 Ga0075370_100420492 392
93 3300045976 Ga0466967_0065487 Ga0466967_0065487_140_1375 392
94 3300049585 Ga0501069_0143405 Ga0501069_0143405_55_1242 392
95 3300050489 nmdc:mga03683_16229_c1 nmdc:mga03683_16229_c1_300_1487 392
96 3300050490 nmdc:mga03n38_51647_c1 nmdc:mga03n38_51647_c1_498_1685 392
97 3300050491 nmdc:mga00v17_5705_c1 nmdc:mga00v17_5705_c1_2410_3597 392
98 3300050491 nmdc:mga00v17_57821_c1 nmdc:mga00v17_57821_c1_871_2058 392
99 3300050492 nmdc:mga0yw44_2844_c1 nmdc:mga0yw44_2844_c1_2555_3742 392
100 3300050494 nmdc:mga06z11_49881_c1 nmdc:mga06z11_49881_c1_619_1836 392
101 3300050496 nmdc:mga07m45_10169_c1 nmdc:mga07m45_10169_c1_277_1464 392
102 3300053088 Ga0500644_0000470 Ga0500644_0000470_12437_13633 392
103 3300053139 Ga0500568_0000017 Ga0500568_0000017_175747_176958 392
104 3300048917 Ga0496114_0000460 Ga0496114_0000460_3623_4837 393
105 3300048918 Ga0496115_0079371 Ga0496115_0079371_573_1787 393
106 3300049583 Ga0501067_0005590 Ga0501067_0005590_2608_3807 393
107 3300049586 Ga0501070_0006648 Ga0501070_0006648_8508_9707 393
108 3300049589 Ga0501073_0012556 Ga0501073_0012556_241_1440 393
109 3300049593 Ga0501077_0023881 Ga0501077_0023881_736_1935 393
110 3300049741 Ga0501079_0077732 Ga0501079_0077732_1145_2344 393
111 3300049742 Ga0501080_0017882 Ga0501080_0017882_3258_4457 393
112 3300054114 Ga0501084_0011193 Ga0501084_0011193_1912_3111 393
113 3300060353 Ga0501082_0019877 Ga0501082_0019877_2075_3274 393
114 iso_pu_bacteria 2739367898 2740167424 393
115 3300005548 Ga0070665_100139639 Ga0070665_1001396392 394
116 3300006038 Ga0075365_10003781 Ga0075365_100037816 395
117 3300006038 Ga0075365_10105203 Ga0075365_101052032 395
118 3300009094 Ga0111539_10238644 Ga0111539_102386441 395
119 3300025945 Ga0207679_10224808 Ga0207679_102248082 395
120 3300031995 Ga0307409_100103197 Ga0307409_1001031971 395
121 3300050492 nmdc:mga0yw44_91029_c1 nmdc:mga0yw44_91029_c1_399_1592 395
122 3300005327 Ga0070658_10114557 Ga0070658_101145572 396
123 3300005329 Ga0070683_100000255 Ga0070683_10000025527 396
124 3300005329 Ga0070683_100067282 Ga0070683_1000672822 396
125 3300005336 Ga0070680_100169184 Ga0070680_1001691842 396
126 3300005337 Ga0070682_100066162 Ga0070682_1000661622 396
127 3300005339 Ga0070660_100066167 Ga0070660_1000661672 396
128 3300005341 Ga0070691_10080632 Ga0070691_100806322 396
129 3300005343 Ga0070687_100144049 Ga0070687_1001440491 396
130 3300005345 Ga0070692_10001241 Ga0070692_100012419 396
131 3300005354 Ga0070675_100033213 Ga0070675_1000332131 396
132 3300005441 Ga0070700_100002077 Ga0070700_1000020774 396
133 3300005458 Ga0070681_10334179 Ga0070681_103341791 396
134 3300005530 Ga0070679_100071642 Ga0070679_1000716422 396
135 3300005535 Ga0070684_100003473 Ga0070684_1000034737 396
136 3300005535 Ga0070684_100133528 Ga0070684_1001335281 396
137 3300005539 Ga0068853_100016252 Ga0068853_1000162522 396
138 3300005543 Ga0070672_100003744 Ga0070672_1000037448 396
139 3300005544 Ga0070686_100037007 Ga0070686_1000370072 396
140 3300005615 Ga0070702_100012683 Ga0070702_1000126832 396
141 3300005616 Ga0068852_100020901 Ga0068852_1000209012 396
142 3300005719 Ga0068861_100003139 Ga0068861_1000031394 396
143 3300005842 Ga0068858_100020464 Ga0068858_1000204643 396
144 3300006844 Ga0075428_100180917 Ga0075428_1001809172 396
145 3300006881 Ga0068865_100012448 Ga0068865_1000124482 396
146 3300009098 Ga0105245_10018805 Ga0105245_100188052 396
147 3300009098 Ga0105245_10038456 Ga0105245_100384562 396
148 3300009148 Ga0105243_10003624 Ga0105243_100036248 396
149 3300009177 Ga0105248_10182632 Ga0105248_101826321 396
150 3300009553 Ga0105249_10022303 Ga0105249_100223034 396
151 3300010375 Ga0105239_10008658 Ga0105239_100086589 396
152 3300013105 Ga0157369_10237409 Ga0157369_102374091 396
153 3300013306 Ga0163162_10026380 Ga0163162_100263804 396
154 3300013307 Ga0157372_10005079 Ga0157372_100050791 396
155 3300013307 Ga0157372_10028357 Ga0157372_100283575 396
156 3300013308 Ga0157375_10024687 Ga0157375_100246873 396
157 3300014325 Ga0163163_10034893 Ga0163163_100348933 396
158 3300014326 Ga0157380_10079725 Ga0157380_100797252 396
159 3300014745 Ga0157377_10014159 Ga0157377_100141592 396
160 3300025908 Ga0207643_10012375 Ga0207643_100123752 396
161 3300025909 Ga0207705_10067574 Ga0207705_100675742 396
162 3300025912 Ga0207707_10035239 Ga0207707_100352391 396
163 3300025927 Ga0207687_10008992 Ga0207687_100089922 396
164 3300025932 Ga0207690_10045734 Ga0207690_100457342 396
165 3300025935 Ga0207709_10037040 Ga0207709_100370403 396
166 3300025940 Ga0207691_10004377 Ga0207691_100043779 396
167 3300025944 Ga0207661_10009834 Ga0207661_100098342 396
168 3300025960 Ga0207651_10052133 Ga0207651_100521332 396
169 3300026035 Ga0207703_10119277 Ga0207703_101192772 396
170 3300026075 Ga0207708_10003699 Ga0207708_100036998 396
171 3300026089 Ga0207648_10019909 Ga0207648_100199093 396
172 3300026116 Ga0207674_10005034 Ga0207674_1000503412 396
173 3300026118 Ga0207675_100001267 Ga0207675_1000012678 396
174 3300026142 Ga0207698_10279629 Ga0207698_102796292 396
175 3300027907 Ga0207428_10081409 Ga0207428_100814092 396
176 3300045976 Ga0466967_0057303 Ga0466967_0057303_181_1413 396
177 3300048905 Ga0496102_0019509 Ga0496102_0019509_1536_2762 396
178 3300048909 Ga0496106_0081529 Ga0496106_0081529_576_1772 396
179 3300048912 Ga0496109_0017927 Ga0496109_0017927_4617_5843 396
180 3300048912 Ga0496109_0324800 Ga0496109_0324800_175_1371 396
181 3300048913 Ga0496110_0015366 Ga0496110_0015366_619_1845 396
182 3300048914 Ga0496111_0012655 Ga0496111_0012655_75_1301 396
183 3300048917 Ga0496114_0076393 Ga0496114_0076393_628_1824 396
184 3300049585 Ga0501069_0110510 Ga0501069_0110510_209_1459 396
185 3300050511 nmdc:mga08y16_20409_c1 nmdc:mga08y16_20409_c1_2816_4012 396
186 3300049569 Ga0501032_0054118 Ga0501032_0054118_1194_2387 397
187 3300049570 Ga0501033_0111951 Ga0501033_0111951_57_1250 397
188 3300049571 Ga0501034_0018872 Ga0501034_0018872_2257_3450 397
189 3300049572 Ga0501036_0049964 Ga0501036_0049964_852_2045 397
190 3300049574 Ga0501038_0001498 Ga0501038_0001498_3240_4433 397
191 3300049575 Ga0501039_0177724 Ga0501039_0177724_189_1382 397
192 3300049822 Ga0501035_0048613 Ga0501035_0048613_921_2114 397
193 3300049823 Ga0501044_0022299 Ga0501044_0022299_4537_5730 397
194 3300013105 Ga0157369_10231658 Ga0157369_102316582 398
195 3300028379 Ga0268266_10016874 Ga0268266_100168744 398
196 3300031995 Ga0307409_100057081 Ga0307409_1000570813 398
197 3300044658 Ga0466972_0034251 Ga0466972_0034251_60_1283 398
198 3300048904 Ga0496101_0069456 Ga0496101_0069456_1145_2374 398
199 3300048905 Ga0496102_0042708 Ga0496102_0042708_909_2138 398
200 3300048910 Ga0496107_0020780 Ga0496107_0020780_459_1688 398
201 3300048912 Ga0496109_0014107 Ga0496109_0014107_3133_4347 398
202 3300048917 Ga0496114_0015801 Ga0496114_0015801_3746_5071 398
203 3300048918 Ga0496115_0051035 Ga0496115_0051035_73_1302 398
204 3300049568 Ga0501031_0063039 Ga0501031_0063039_1123_2328 398
205 3300049569 Ga0501032_0029983 Ga0501032_0029983_625_1830 398
206 3300049570 Ga0501033_0029862 Ga0501033_0029862_1486_2718 398
207 3300049572 Ga0501036_0016275 Ga0501036_0016275_2527_3732 398
208 3300049573 Ga0501037_0007263 Ga0501037_0007263_107_1312 398
209 3300049575 Ga0501039_0012031 Ga0501039_0012031_1852_3057 398
210 3300049578 Ga0501042_0034424 Ga0501042_0034424_807_2012 398
211 3300049579 Ga0501043_0005773 Ga0501043_0005773_1378_2583 398
212 3300049580 Ga0501046_0000573 Ga0501046_0000573_21424_22629 398
213 3300049580 Ga0501046_0004929 Ga0501046_0004929_8863_10068 398
214 3300049581 Ga0501047_0064673 Ga0501047_0064673_498_1703 398
215 3300049582 Ga0501048_0015336 Ga0501048_0015336_2161_3366 398
216 3300049586 Ga0501070_0023686 Ga0501070_0023686_1974_3179 398
217 3300049822 Ga0501035_0013377 Ga0501035_0013377_1824_3029 398
218 3300049823 Ga0501044_0148152 Ga0501044_0148152_626_1831 398
219 iso_pu_bacteria 2643221561 2643823848 398
220 iso_pu_bacteria 2643221696 2644533124 398
221 3300045976 Ga0466967_0094792 Ga0466967_0094792_383_1597 399
222 iso_pu_bacteria 2984576629 2984580672 399
223 iso_pu_bacteria 2990256926 2990258364 399
224 3300025938 Ga0207704_10044531 Ga0207704_100445312 400
225 3300048907 Ga0496104_0130394 Ga0496104_0130394_151_1353 400
226 3300049568 Ga0501031_0136763 Ga0501031_0136763_205_1416 400
227 3300049575 Ga0501039_0112549 Ga0501039_0112549_734_1945 400
228 3300049578 Ga0501042_0112462 Ga0501042_0112462_112_1323 400
229 3300048912 Ga0496109_0051412 Ga0496109_0051412_1013_2239 402
230 3300046675 Ga0495657_0087803 Ga0495657_0087803_328_1557 403
231 3300053085 Ga0495619_0016627 Ga0495619_0016627_1533_2762 403
232 3300000549 LJQas_1000795 LJQas_10007953 405
233 3300031903 Ga0307407_10077636 Ga0307407_100776362 405
234 3300032002 Ga0307416_100354986 Ga0307416_1003549862 405
235 3300032005 Ga0307411_10031129 Ga0307411_100311292 405

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06224

AlkZ-like

DNA glycosylase AlkZ-like

73

416

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
2fa5-assembly1.cif.gz_B the crystal structure of an unliganded multiple antibiotic-resistance repressor (marr) from xanthomonas campestris 0.9017 210 255
1ku9-assembly1.cif.gz_B x-ray structure of a methanococcus jannaschii dna-binding protein: implications for antibiotic resistance in staphylococcus aureus 0.8978 210 271
5k5r-assembly2.cif.gz_E aspa-32mer dna,crystal form 2 0.8798 211 271
6pcp-assembly2.cif.gz_B mechanism for regulation of dna binding of bordetella bronchiseptica bpsr by 6-hydroxynicotinic acid 0.8777 210 271
5kk1-assembly1.cif.gz_E structure of pnob8 aspa-dna complex. 0.8774 211 271
ID Description Score Start End Superfamily
af_Q9VG60_1_78_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9332 211 267 1.10.10.10
af_Q4DKK4_76_138_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9192 213 269 1.10.10.10
af_Q2FV08_10_92_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9183 210 268 1.10.10.10
4ijaB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9099 212 255 1.10.10.10
af_Q7ZUX1_1_79_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9025 211 267 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A530LID8-F1-model_v4 Winged helix-turn-helix domain-containing protein 0.9828 308 397
AF-A0A519QBZ4-F1-model_v4 Winged helix-turn-helix domain-containing protein 0.9814 188 396
AF-A0A502N067-F1-model_v4 deleted 0.9787 308 399
AF-A0A520XTT4-F1-model_v4 Winged helix-turn-helix domain-containing protein 0.9751 289 396
AF-A0A349CUG4-F1-model_v4 Winged helix-turn-helix domain-containing protein 0.9741 282 396

Feature Viewer

pLDDT pTM Quality
88.64 0.87 High
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Predicted Structure (AlphaFold2)

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