F348056

General Info

Members Datasets Scaffolds Average Seq Length
235 135 470 529

Family's Representative Sequence

Representative Sequence 3300009093|Ga0105240_10255399|Ga0105240_102553992
Length 568
Sequence MSRRFLGVRWWLGAAFAVVAALSTAIVVSQFSTRSENAVRGHVENQAVVSAVLATQRLGTLKEVTTPTIDAAARRSNLQLTVYGRNGMRLASSGGHATRLDRAALDAALRGDRYTDSTANGRIFVVALPFHGGALVAHSVRPDVQAAIGILNDQALRAGVIAGLIGVAXXLILAQLIALRLRRLSRAAEAIALGDFETPLQHRFHDEFGALAQNFERMRRQLRRSFQRIEAERDRLRMLLERLHEGVVTVDEQLVVRFANAEARRLLGGRLAEGDALPDPWSGFSLRAFASTLFESDDGALAQVHVRPDEERAFTLVGIPSQPETDNVMIVIDDLTETERRELAEREFVTNAAHELRTPLTTIIGAVEVLQSGAKNDATERDRFLGHIEREAERLARLARAMLTLARAHAGQEQPRSELVALDTLLEDVADDLRPSAGVAVEVDVAFELDAIVNRDLLEQAVRNLAENAVKHTRAGRIVLRAYPAGINVRVEVEDTGAGMTAEAQRHVFDRFYRGQNRDAEGFGLGLAIVRQAVQTLGGRVELESAPGKGTLVRIELRRARVRREVPA

Samples

Sample ID Description Type Environment
1 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
7 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
21 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
22 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
23 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
24 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
25 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
26 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
27 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
28 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
29 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
30 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
31 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
32 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
47 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
48 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
49 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
50 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
51 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
52 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
53 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
54 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
55 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
56 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
57 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
58 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
59 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
60 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
61 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
62 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
63 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
64 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
65 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
66 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
67 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
68 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
69 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
70 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
71 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
72 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
73 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
74 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
75 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
76 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
77 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
78 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
79 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
80 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
81 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
82 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
83 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
84 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
85 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
86 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
87 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
88 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
89 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
90 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
91 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
92 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
93 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
94 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
95 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
96 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
97 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
98 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
99 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
100 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
101 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
102 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
103 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
104 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
105 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
106 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
107 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
108 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
109 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
110 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
111 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
112 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
113 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
114 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
115 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
116 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
117 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
118 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
119 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
120 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
121 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
122 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
123 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
125 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
126 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
127 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
128 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
129 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
130 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
131 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
132 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
133 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
134 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
135 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.72
Metatranscriptomes 1.28
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.43
Nodule 0
Rhizoplane 10.21
Rhizosphere 89.36
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105240_10255399 3300009093 Bacteria 2025
2 Ga0070658_10012672 3300005327 Bacteria 6763
3 Ga0070658_10102048 3300005327 Bacteria 2372
4 Ga0070683_100003709 3300005329 Bacteria 12455
5 Ga0070683_100081668 3300005329 Bacteria 3027
6 Ga0070683_100132266 3300005329 Bacteria 2361
7 Ga0070680_100006365 3300005336 Bacteria 8969
8 Ga0070660_100010368 3300005339 Bacteria 6585
9 Ga0070660_100016579 3300005339 Bacteria 5349
10 Ga0070660_100027616 3300005339 Bacteria 4237
11 Ga0070659_100028760 3300005366 Bacteria 4293
12 Ga0070659_100086049 3300005366 Bacteria 2515
13 Ga0070709_10000689 3300005434 Bacteria 19202
14 Ga0070714_100002958 3300005435 Bacteria 12588
15 Ga0070714_100025151 3300005435 Bacteria 4911
16 Ga0070714_100029930 3300005435 Bacteria 4530
17 Ga0070714_100036695 3300005435 Bacteria 4112
18 Ga0070714_100075990 3300005435 Bacteria 2915
19 Ga0070714_100113689 3300005435 Bacteria 2400
20 Ga0070713_100006369 3300005436 Bacteria 8175
21 Ga0070710_10009791 3300005437 Bacteria 4695
22 Ga0070711_100080489 3300005439 Bacteria 2319
23 Ga0070681_10027646 3300005458 Bacteria 5703
24 Ga0070707_100000126 3300005468 Bacteria 71727
25 Ga0070707_100091250 3300005468 Bacteria 2949
26 Ga0070698_100074309 3300005471 Bacteria 3404
27 Ga0070679_100047102 3300005530 Bacteria 4299
28 Ga0070679_100073214 3300005530 Bacteria 3418
29 Ga0070684_100025250 3300005535 Bacteria 4993
30 Ga0070684_100113591 3300005535 Bacteria 2431
31 Ga0070695_100000007 3300005545 Bacteria 89343
32 Ga0068856_100020000 3300005614 Bacteria 6499
33 Ga0068856_100174822 3300005614 Bacteria 2160
34 Ga0068852_100073689 3300005616 Bacteria 3004
35 Ga0070717_10002701 3300006028 Bacteria 12501
36 Ga0070717_10002838 3300006028 Bacteria 12277
37 Ga0070717_10073661 3300006028 Bacteria 2854
38 Ga0070716_100005904 3300006173 Bacteria 5957
39 Ga0075434_100141875 3300006871 Bacteria 2423
40 Ga0105240_10008296 3300009093 Bacteria 14868
41 Ga0105240_10013248 3300009093 Bacteria 11338
42 Ga0105240_10155161 3300009093 Bacteria 2724
43 Ga0105247_10027620 3300009101 Bacteria 3431
44 Ga0157370_10024334 3300013104 Bacteria 5996
45 Ga0157369_10005013 3300013105 Bacteria 15512
46 Ga0157369_10017570 3300013105 Bacteria 8038
47 Ga0157369_10043974 3300013105 Bacteria 4864
48 Ga0157369_10098466 3300013105 Bacteria 3119
49 Ga0157372_10189956 3300013307 Bacteria 2379
50 Ga0182008_10002306 3300014497 Bacteria 12024
51 Ga0157376_10010004 3300014969 Bacteria 6919
52 Ga0182007_10005449 3300015262 Bacteria 5586
53 Ga0206354_11504809 3300020081 Bacteria 3541
54 Ga0206354_11593564 3300020081 Bacteria 4025
55 Ga0206353_10996194 3300020082 Bacteria 2440
56 Ga0207692_10001767 3300025898 Bacteria 8200
57 Ga0207692_10014111 3300025898 Bacteria 3484
58 Ga0207705_10054312 3300025909 Bacteria 2887
59 Ga0207705_10086441 3300025909 Bacteria 2292
60 Ga0207695_10107455 3300025913 Bacteria 2776
61 Ga0207693_10000427 3300025915 Bacteria 38281
62 Ga0207693_10005314 3300025915 Bacteria 10757
63 Ga0207693_10091365 3300025915 Bacteria 2387
64 Ga0207663_10000562 3300025916 Bacteria 16417
65 Ga0207657_10000892 3300025919 Bacteria 31592
66 Ga0207657_10004922 3300025919 Bacteria 14041
67 Ga0207657_10005481 3300025919 Bacteria 13249
68 Ga0207657_10013280 3300025919 Bacteria 8080
69 Ga0207652_10036262 3300025921 Bacteria 4169
70 Ga0207700_10006846 3300025928 Bacteria 6929
71 Ga0207700_10016127 3300025928 Bacteria 4953
72 Ga0207664_10003101 3300025929 Bacteria 11044
73 Ga0207664_10012384 3300025929 Bacteria 6094
74 Ga0207664_10037011 3300025929 Bacteria 3774
75 Ga0207664_10053496 3300025929 Bacteria 3196
76 Ga0207664_10091562 3300025929 Bacteria 2494
77 Ga0207665_10000096 3300025939 Bacteria 57067
78 Ga0207661_10069280 3300025944 Bacteria 2876
79 Ga0207667_10128499 3300025949 Bacteria 2610
80 Ga0207702_10097292 3300026078 Bacteria 2590
81 Ga0207698_10022414 3300026142 Bacteria 4388
82 Ga0207698_10075714 3300026142 Bacteria 2691
83 Ga0265326_10015522 3300028558 Bacteria 2208
84 Ga0265334_10007283 3300028573 Bacteria 4746
85 Ga0265334_10012745 3300028573 Bacteria 3529
86 Ga0265336_10003158 3300028666 Bacteria 6554
87 Ga0265338_10001704 3300028800 Bacteria 34899
88 Ga0265338_10005197 3300028800 Bacteria 17092
89 Ga0265338_10054646 3300028800 Bacteria 3558
90 Ga0265338_10055891 3300028800 Bacteria 3506
91 Ga0265325_10050818 3300031241 Bacteria 2133
92 Ga0265339_10040807 3300031249 Bacteria 2578
93 Ga0265314_10023670 3300031711 Bacteria 4675
94 Ga0265314_10037846 3300031711 Bacteria 3491
95 Ga0373926_0016588 3300035083 Bacteria 2522
96 Ga0373927_0023401 3300035695 Bacteria 4046
97 Ga0373947_0002723 3300035725 Bacteria 10605
98 Ga0373937_0050604 3300036401 Bacteria 3806
99 Ga0373925_0004106 3300037068 Bacteria 11051
100 Ga0395899_0024615 3300037312 Bacteria 4550
101 Ga0395900_0215749 3300037418 Bacteria 1936
102 Ga0395898_0020824 3300037466 Bacteria 6656
103 Ga0395898_0050908 3300037466 Bacteria 4052
104 Ga0395901_0058379 3300038443 Bacteria 4013
105 Ga0436360_0073421 3300039438 Bacteria 2231
106 Ga0466969_0020518 3300044656 Bacteria 3421
107 Ga0466972_0011612 3300044658 Bacteria 4422
108 Ga0466966_0037424 3300044684 Bacteria 3129
109 Ga0466966_0077762 3300044684 Bacteria 2070
110 Ga0466961_0055663 3300044693 Bacteria 2521
111 Ga0466963_0003268 3300044694 Bacteria 9242
112 Ga0466963_0003330 3300044694 Bacteria 9163
113 Ga0466963_0005424 3300044694 Bacteria 7467
114 Ga0466963_0009158 3300044694 Bacteria 5955
115 Ga0466963_0017359 3300044694 Bacteria 4485
116 Ga0466971_0005636 3300044719 Bacteria 5444
117 Ga0466970_0003899 3300044765 Bacteria 7307
118 Ga0466957_0004292 3300044842 Bacteria 7909
119 Ga0466957_0009749 3300044842 Bacteria 5486
120 Ga0466957_0018473 3300044842 Bacteria 4096
121 Ga0466957_0018683 3300044842 Bacteria 4072
122 Ga0466957_0064939 3300044842 Bacteria 2246
123 Ga0466960_0031461 3300044901 Bacteria 2449
124 Ga0466959_0002884 3300045049 Bacteria 11093
125 Ga0466958_0002995 3300045836 Bacteria 8656
126 Ga0466958_0013525 3300045836 Bacteria 4647
127 Ga0466967_0000598 3300045976 Bacteria 17926
128 Ga0466967_0001409 3300045976 Bacteria 13908
129 Ga0466967_0005758 3300045976 Bacteria 8655
130 Ga0466967_0010046 3300045976 Bacteria 7071
131 Ga0466967_0014797 3300045976 Bacteria 6095
132 Ga0466967_0015137 3300045976 Bacteria 6037
133 Ga0466967_0015294 3300045976 Bacteria 6011
134 Ga0466967_0021843 3300045976 Bacteria 5208
135 Ga0466967_0040341 3300045976 Bacteria 4018
136 Ga0466967_0053398 3300045976 Bacteria 3551
137 Ga0466967_0093762 3300045976 Bacteria 2732
138 Ga0466967_0104414 3300045976 Bacteria 2594
139 Ga0466967_0138362 3300045976 Bacteria 2266
140 Ga0466967_0162284 3300045976 Bacteria 2098
141 Ga0495603_0026543 3300046455 Bacteria 3498
142 Ga0495629_0009895 3300046459 Bacteria 6959
143 Ga0495629_0073959 3300046459 Bacteria 2379
144 Ga0495641_0003142 3300046461 Bacteria 12574
145 Ga0495651_0000011 3300046462 Bacteria 147193
146 Ga0495651_0038060 3300046462 Bacteria 3746
147 Ga0495653_0015988 3300046463 Bacteria 6115
148 Ga0495653_0067531 3300046463 Bacteria 2685
149 Ga0495653_0097978 3300046463 Bacteria 2129
150 Ga0495582_0010122 3300046473 Bacteria 5193
151 Ga0495582_0114638 3300046473 Bacteria 1515
152 Ga0495639_0000660 3300046475 Bacteria 15951
153 Ga0495662_0005199 3300046476 Bacteria 6523
154 Ga0495608_0003645 3300046511 Bacteria 11063
155 Ga0495618_0000815 3300046514 Bacteria 21740
156 Ga0495618_0035751 3300046514 Bacteria 3118
157 Ga0495628_0000024 3300046516 Bacteria 130196
158 Ga0495630_0003658 3300046517 Bacteria 10719
159 Ga0495630_0030246 3300046517 Bacteria 4027
160 Ga0495630_0033196 3300046517 Bacteria 3849
161 Ga0495652_0000050 3300046529 Bacteria 120480
162 Ga0495665_0004665 3300046531 Bacteria 7391
163 Ga0495640_0033883 3300046533 Bacteria 3627
164 Ga0495587_0000353 3300046536 Bacteria 32872
165 Ga0495645_0000376 3300046543 Bacteria 31025
166 Ga0495667_0051515 3300046559 Bacteria 2715
167 Ga0495634_0015145 3300046642 Bacteria 5543
168 Ga0495634_0100659 3300046642 Bacteria 1867
169 Ga0495635_0036456 3300046663 Bacteria 3409
170 Ga0495599_0000009 3300046678 Bacteria 217299
171 Ga0495623_0000039 3300046679 Bacteria 80360
172 Ga0495623_0087981 3300046679 Bacteria 1913
173 Ga0495646_0028021 3300046680 Bacteria 3530
174 Ga0495647_0010691 3300046681 Bacteria 3130
175 Ga0495613_0043389 3300046689 Bacteria 3327
176 Ga0495624_0004415 3300046690 Bacteria 10289
177 Ga0495624_0030603 3300046690 Bacteria 3505
178 Ga0495600_0027550 3300046809 Bacteria 3672
179 Ga0495604_0000183 3300047317 Bacteria 55826
180 Ga0495604_0020518 3300047317 Bacteria 5278
181 Ga0495676_0025264 3300047321 Bacteria 5131
182 Ga0495680_0005667 3300047322 Bacteria 11698
183 Ga0495680_0022360 3300047322 Bacteria 5270
184 Ga0495680_0043850 3300047322 Bacteria 3539
185 Ga0495675_0000167 3300047444 Bacteria 47216
186 Ga0495684_0038564 3300047471 Bacteria 3662
187 Ga0495684_0088604 3300047471 Bacteria 2345
188 Ga0495684_0090173 3300047471 Bacteria 2322
189 Ga0495593_0009894 3300047673 Bacteria 5530
190 Ga0495602_0000477 3300048088 Bacteria 37020
191 Ga0495614_0003038 3300048089 Bacteria 7477
192 Ga0496100_0011564 3300048903 Bacteria 5028
193 Ga0496100_0075037 3300048903 Bacteria 2267
194 Ga0496100_0079725 3300048903 Bacteria 2207
195 Ga0496101_0023798 3300048904 Bacteria 4234
196 Ga0496102_0006390 3300048905 Bacteria 10044
197 Ga0496102_0010090 3300048905 Bacteria 8127
198 Ga0496103_0011229 3300048906 Bacteria 5305
199 Ga0496103_0021072 3300048906 Bacteria 3921
200 Ga0496105_0009873 3300048908 Bacteria 7485
201 Ga0496105_0042964 3300048908 Bacteria 3727
202 Ga0496106_0002005 3300048909 Bacteria 15309
203 Ga0496106_0014388 3300048909 Bacteria 5846
204 Ga0496108_0037002 3300048911 Bacteria 4063
205 Ga0496108_0048310 3300048911 Bacteria 3558
206 Ga0496109_0017049 3300048912 Bacteria 6357
207 Ga0496109_0122295 3300048912 Bacteria 2425
208 Ga0496111_0004755 3300048914 Bacteria 8616
209 Ga0496112_0026611 3300048915 Bacteria 5570
210 Ga0496112_0073685 3300048915 Bacteria 3375
211 Ga0496113_0001330 3300048916 Bacteria 13671
212 Ga0496114_0009789 3300048917 Bacteria 7615
213 Ga0496114_0082722 3300048917 Bacteria 2714
214 Ga0496115_0020951 3300048918 Bacteria 5044
215 Ga0496115_0022109 3300048918 Bacteria 4921
216 Ga0501034_0040016 3300049571 Bacteria 4747
217 Ga0501067_0022389 3300049583 Bacteria 3497
218 Ga0501070_0008558 3300049586 Bacteria 8650
219 Ga0501070_0013657 3300049586 Bacteria 6841
220 Ga0501074_0011419 3300049590 Bacteria 6459
221 Ga0501080_0001936 3300049742 Bacteria 17881
222 Ga0501083_0003431 3300049744 Bacteria 11069
223 nmdc:mga0n895_73928_c1 3300050512 Bacteria 3385
224 Ga0495601_0000094 3300053077 Bacteria 48572
225 Ga0495601_0068157 3300053077 Bacteria 2267
226 Ga0495612_0004590 3300053078 Bacteria 5727
227 Ga0495612_0025693 3300053078 Bacteria 2365
228 Ga0495595_0013093 3300053084 Bacteria 3499
229 Ga0495619_0017988 3300053085 Bacteria 4481
230 Ga0495619_0024763 3300053085 Bacteria 3850
231 Ga0495619_0039443 3300053085 Bacteria 3083
232 Ga0495619_0081034 3300053085 Bacteria 2185
233 Ga0500566_0048675 3300053094 Bacteria 2430
234 Ga0466962_0001852 3300061719 Bacteria 9943
235 Ga0466962_0010578 3300061719 Bacteria 4437
236 Ga0105240_10255399
237 Ga0070658_10012672
238 Ga0070658_10102048
239 Ga0070683_100003709
240 Ga0070683_100081668
241 Ga0070683_100132266
242 Ga0070680_100006365
243 Ga0070660_100010368
244 Ga0070660_100016579
245 Ga0070660_100027616
246 Ga0070659_100028760
247 Ga0070659_100086049
248 Ga0070709_10000689
249 Ga0070714_100002958
250 Ga0070714_100025151
251 Ga0070714_100029930
252 Ga0070714_100036695
253 Ga0070714_100075990
254 Ga0070714_100113689
255 Ga0070713_100006369
256 Ga0070710_10009791
257 Ga0070711_100080489
258 Ga0070681_10027646
259 Ga0070707_100000126
260 Ga0070707_100091250
261 Ga0070698_100074309
262 Ga0070679_100047102
263 Ga0070679_100073214
264 Ga0070684_100025250
265 Ga0070684_100113591
266 Ga0070695_100000007
267 Ga0068856_100020000
268 Ga0068856_100174822
269 Ga0068852_100073689
270 Ga0070717_10002701
271 Ga0070717_10002838
272 Ga0070717_10073661
273 Ga0070716_100005904
274 Ga0075434_100141875
275 Ga0105240_10008296
276 Ga0105240_10013248
277 Ga0105240_10155161
278 Ga0105247_10027620
279 Ga0157370_10024334
280 Ga0157369_10005013
281 Ga0157369_10017570
282 Ga0157369_10043974
283 Ga0157369_10098466
284 Ga0157372_10189956
285 Ga0182008_10002306
286 Ga0157376_10010004
287 Ga0182007_10005449
288 Ga0206354_11504809
289 Ga0206354_11593564
290 Ga0206353_10996194
291 Ga0207692_10001767
292 Ga0207692_10014111
293 Ga0207705_10054312
294 Ga0207705_10086441
295 Ga0207695_10107455
296 Ga0207693_10000427
297 Ga0207693_10005314
298 Ga0207693_10091365
299 Ga0207663_10000562
300 Ga0207657_10000892
301 Ga0207657_10004922
302 Ga0207657_10005481
303 Ga0207657_10013280
304 Ga0207652_10036262
305 Ga0207700_10006846
306 Ga0207700_10016127
307 Ga0207664_10003101
308 Ga0207664_10012384
309 Ga0207664_10037011
310 Ga0207664_10053496
311 Ga0207664_10091562
312 Ga0207665_10000096
313 Ga0207661_10069280
314 Ga0207667_10128499
315 Ga0207702_10097292
316 Ga0207698_10022414
317 Ga0207698_10075714
318 Ga0265326_10015522
319 Ga0265334_10007283
320 Ga0265334_10012745
321 Ga0265336_10003158
322 Ga0265338_10001704
323 Ga0265338_10005197
324 Ga0265338_10054646
325 Ga0265338_10055891
326 Ga0265325_10050818
327 Ga0265339_10040807
328 Ga0265314_10023670
329 Ga0265314_10037846
330 Ga0373926_0016588
331 Ga0373927_0023401
332 Ga0373947_0002723
333 Ga0373937_0050604
334 Ga0373925_0004106
335 Ga0395899_0024615
336 Ga0395900_0215749
337 Ga0395898_0020824
338 Ga0395898_0050908
339 Ga0395901_0058379
340 Ga0436360_0073421
341 Ga0466969_0020518
342 Ga0466972_0011612
343 Ga0466966_0037424
344 Ga0466966_0077762
345 Ga0466961_0055663
346 Ga0466963_0003268
347 Ga0466963_0003330
348 Ga0466963_0005424
349 Ga0466963_0009158
350 Ga0466963_0017359
351 Ga0466971_0005636
352 Ga0466970_0003899
353 Ga0466957_0004292
354 Ga0466957_0009749
355 Ga0466957_0018473
356 Ga0466957_0018683
357 Ga0466957_0064939
358 Ga0466960_0031461
359 Ga0466959_0002884
360 Ga0466958_0002995
361 Ga0466958_0013525
362 Ga0466967_0000598
363 Ga0466967_0001409
364 Ga0466967_0005758
365 Ga0466967_0010046
366 Ga0466967_0014797
367 Ga0466967_0015137
368 Ga0466967_0015294
369 Ga0466967_0021843
370 Ga0466967_0040341
371 Ga0466967_0053398
372 Ga0466967_0093762
373 Ga0466967_0104414
374 Ga0466967_0138362
375 Ga0466967_0162284
376 Ga0495603_0026543
377 Ga0495629_0009895
378 Ga0495629_0073959
379 Ga0495641_0003142
380 Ga0495651_0000011
381 Ga0495651_0038060
382 Ga0495653_0015988
383 Ga0495653_0067531
384 Ga0495653_0097978
385 Ga0495582_0010122
386 Ga0495582_0114638
387 Ga0495639_0000660
388 Ga0495662_0005199
389 Ga0495608_0003645
390 Ga0495618_0000815
391 Ga0495618_0035751
392 Ga0495628_0000024
393 Ga0495630_0003658
394 Ga0495630_0030246
395 Ga0495630_0033196
396 Ga0495652_0000050
397 Ga0495665_0004665
398 Ga0495640_0033883
399 Ga0495587_0000353
400 Ga0495645_0000376
401 Ga0495667_0051515
402 Ga0495634_0015145
403 Ga0495634_0100659
404 Ga0495635_0036456
405 Ga0495599_0000009
406 Ga0495623_0000039
407 Ga0495623_0087981
408 Ga0495646_0028021
409 Ga0495647_0010691
410 Ga0495613_0043389
411 Ga0495624_0004415
412 Ga0495624_0030603
413 Ga0495600_0027550
414 Ga0495604_0000183
415 Ga0495604_0020518
416 Ga0495676_0025264
417 Ga0495680_0005667
418 Ga0495680_0022360
419 Ga0495680_0043850
420 Ga0495675_0000167
421 Ga0495684_0038564
422 Ga0495684_0088604
423 Ga0495684_0090173
424 Ga0495593_0009894
425 Ga0495602_0000477
426 Ga0495614_0003038
427 Ga0496100_0011564
428 Ga0496100_0075037
429 Ga0496100_0079725
430 Ga0496101_0023798
431 Ga0496102_0006390
432 Ga0496102_0010090
433 Ga0496103_0011229
434 Ga0496103_0021072
435 Ga0496105_0009873
436 Ga0496105_0042964
437 Ga0496106_0002005
438 Ga0496106_0014388
439 Ga0496108_0037002
440 Ga0496108_0048310
441 Ga0496109_0017049
442 Ga0496109_0122295
443 Ga0496111_0004755
444 Ga0496112_0026611
445 Ga0496112_0073685
446 Ga0496113_0001330
447 Ga0496114_0009789
448 Ga0496114_0082722
449 Ga0496115_0020951
450 Ga0496115_0022109
451 Ga0501034_0040016
452 Ga0501067_0022389
453 Ga0501070_0008558
454 Ga0501070_0013657
455 Ga0501074_0011419
456 Ga0501080_0001936
457 Ga0501083_0003431
458 nmdc:mga0n895_73928_c1
459 Ga0495601_0000094
460 Ga0495601_0068157
461 Ga0495612_0004590
462 Ga0495612_0025693
463 Ga0495595_0013093
464 Ga0495619_0017988
465 Ga0495619_0024763
466 Ga0495619_0039443
467 Ga0495619_0081034
468 Ga0500566_0048675
469 Ga0466962_0001852
470 Ga0466962_0010578

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00672

HAMP

HAMP domain

172

224

0.96

PF00512

HisKA

His Kinase A (phospho-acceptor) domain

344

411

0.95

PF02518

HATPase_c

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

453

561

0.94

Map