F347820

General Info

Members Datasets Scaffolds Average Seq Length
235 177 470 359

Family's Representative Sequence

Representative Sequence 3300005354|Ga0070675_100184790|Ga0070675_1001847903
Length 392
Sequence MAAIPLTTPGRVPIFDGHNDVLLRLHRRGGEKTAGAFLDGEAKGHLDLPKARQGGFAGGLFAIFVPSTARPTSGNGSASSDTAFSDVPSPPAVEMTAAQAAVYGMVSLLLRIERESQGRVRVCRNVDDIRRSFAADVLASVLHIEGAEAIDPDFELLDVLHEAGLRSLGLVWSRPNAFGHGVPFLCPSSPDTGPGLTALGKELVGACNRLKILIDLSHLNEKGFWDVAETSNAPLVATHSNAHALSPHSRNLTDEQLAAIRGTGGMVGVNFATSFLRADGRADADTPAELVIDHLEYMLERVGEDGVGFGSDFDGARVPAGIGNAAGLQHLVEIMRARDYGERLIAKVCSGNWLRVLERTWEGAETANASSRNIPPAGKDRAPRRTARRASK

Samples

Sample ID Description Type Environment
1 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
2 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
8 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
13 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
14 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
25 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
26 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
29 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
30 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
31 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
32 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
33 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
34 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
38 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
39 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
40 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
46 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
47 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
48 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
49 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
50 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
51 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
52 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
90 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
91 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
92 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
93 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
94 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
95 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
96 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
97 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
98 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
99 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
100 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
101 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
102 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
103 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
104 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
105 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
106 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
107 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
108 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
109 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
110 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
111 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
112 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
113 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
114 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
115 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
116 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
117 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
118 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
119 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
120 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
121 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
122 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
123 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
124 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
125 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
126 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
127 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
128 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
129 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
130 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
131 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
132 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
133 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
134 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
135 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
136 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
137 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
138 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
139 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
140 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
141 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
142 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
143 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
144 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
145 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
146 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
147 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
148 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
149 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
150 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
151 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
152 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
153 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
158 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
159 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
160 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
161 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
162 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
163 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
164 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
165 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
166 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
167 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
168 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
169 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
170 2585427633 Neorhizobium galegae bv. officinalis HAMBI 1141 Isolate Nodule
171 2585427634 Neorhizobium galegae bv. orientalis HAMBI 540 Isolate Nodule
172 2643221629 Devosia sp. Root105 Isolate Unclassified
173 2643221662 Devosia sp. Root413D1 Isolate Unclassified
174 2671180139 Chelativorans sp. A52C2 Isolate Unclassified
175 2791355197 Bradyrhizobium sp. C9 Isolate Nodule
176 2889306138 Methylobacterium sp. PvR107 Isolate Rhizosphere
177 3005474847 Bradyrhizobium sp. CCBAU 53421 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 96.6
Metatranscriptomes 0
Isolates 3.4

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.38
Nodule 1.7
Rhizoplane 7.66
Rhizosphere 77.02
Stem 0
Stem Tuber 0
Unclassified 2.98

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070675_100184790 3300005354 Bacteria 1803
2 JGI25165J46597_1004470 3300003214 Bacteria 2986
3 Ga0070690_100011052 3300005330 Bacteria 5271
4 Ga0068868_100112906 3300005338 Bacteria 2209
5 Ga0070689_100011172 3300005340 Bacteria 6425
6 Ga0070668_100264629 3300005347 Bacteria 1431
7 Ga0070673_100015824 3300005364 Bacteria 5312
8 Ga0070688_100005842 3300005365 Bacteria 6514
9 Ga0070667_100043554 3300005367 Bacteria 3767
10 Ga0070714_100023355 3300005435 Bacteria 5079
11 Ga0070714_100032386 3300005435 Bacteria 4362
12 Ga0070714_100098175 3300005435 Bacteria 2576
13 Ga0070714_100363719 3300005435 Bacteria 1361
14 Ga0070713_100040703 3300005436 Bacteria 3780
15 Ga0070700_100029310 3300005441 Bacteria 3281
16 Ga0070700_100044282 3300005441 Bacteria 2740
17 Ga0070694_100095653 3300005444 Bacteria 2092
18 Ga0070663_100017978 3300005455 Bacteria 4625
19 Ga0070678_100036694 3300005456 Bacteria 3433
20 Ga0070681_10059660 3300005458 Bacteria 3795
21 Ga0070685_10027374 3300005466 Bacteria 3150
22 Ga0070684_100012119 3300005535 Bacteria 6895
23 Ga0070665_100014488 3300005548 Bacteria 7908
24 Ga0068856_100297389 3300005614 Bacteria 1631
25 Ga0070702_100039690 3300005615 Bacteria 2628
26 Ga0068852_100061472 3300005616 Bacteria 3264
27 Ga0068864_100030429 3300005618 Bacteria 4575
28 Ga0068861_100046834 3300005719 Bacteria 3262
29 Ga0068870_10003224 3300005840 Bacteria 6887
30 Ga0068863_100118545 3300005841 Bacteria 2523
31 Ga0068863_100158089 3300005841 Bacteria 2170
32 Ga0068860_100006259 3300005843 Bacteria 11954
33 Ga0068860_100125045 3300005843 Bacteria 2465
34 Ga0081538_10012399 3300005981 Bacteria 6832
35 Ga0070717_10007673 3300006028 Bacteria 8020
36 Ga0075365_10018524 3300006038 Bacteria 4283
37 Ga0075365_10045219 3300006038 Bacteria 2887
38 Ga0075365_10169082 3300006038 Bacteria 1525
39 Ga0070715_10087590 3300006163 Bacteria 1426
40 Ga0070712_100010737 3300006175 Bacteria 5787
41 Ga0070712_100269003 3300006175 Unclassified 1368
42 Ga0075367_10062722 3300006178 Bacteria 2221
43 Ga0075367_10078589 3300006178 Bacteria 1993
44 Ga0075366_10033427 3300006195 Bacteria 3029
45 Ga0097621_100032545 3300006237 Bacteria 4146
46 Ga0068871_100112161 3300006358 Bacteria 2294
47 Ga0075433_10001378 3300006852 Bacteria 17864
48 Ga0075434_100029421 3300006871 Bacteria 5405
49 Ga0075435_100005134 3300007076 Bacteria 9101
50 Ga0099794_10016636 3300007265 Bacteria 3264
51 Ga0105242_10243569 3300009176 Bacteria 1617
52 Ga0105248_10145216 3300009177 Bacteria 2677
53 Ga0105248_10462623 3300009177 Bacteria 1430
54 Ga0105237_10000124 3300009545 Bacteria 107409
55 Ga0105239_10010895 3300010375 Bacteria 10159
56 Ga0105239_10146946 3300010375 Bacteria 2630
57 Ga0105239_10155267 3300010375 Bacteria 2556
58 Ga0105239_10411223 3300010375 Bacteria 1532
59 Ga0105246_10135603 3300011119 Bacteria 1844
60 Ga0163163_10282529 3300014325 Bacteria 1711
61 Ga0157379_10065042 3300014968 Bacteria 3259
62 Ga0157379_10138230 3300014968 Bacteria 2196
63 Ga0157376_10100156 3300014969 Bacteria 2530
64 Ga0213876_10019331 3300021384 Bacteria 3599
65 Ga0213876_10024232 3300021384 Bacteria 3203
66 Ga0209233_1000489 3300025261 Bacteria 24014
67 Ga0209758_1002899 3300025297 Bacteria 16560
68 Ga0207642_10012043 3300025899 Bacteria 3109
69 Ga0207710_10006666 3300025900 Bacteria 4922
70 Ga0207688_10000136 3300025901 Bacteria 31013
71 Ga0207688_10133142 3300025901 Bacteria 1458
72 Ga0207680_10019432 3300025903 Bacteria 3633
73 Ga0207643_10002615 3300025908 Bacteria 9743
74 Ga0207684_10163178 3300025910 Bacteria 1919
75 Ga0207707_10045643 3300025912 Bacteria 3818
76 Ga0207671_10000095 3300025914 Bacteria 137647
77 Ga0207693_10050096 3300025915 Bacteria 3280
78 Ga0207693_10240778 3300025915 Bacteria 1420
79 Ga0207693_10254874 3300025915 Unclassified 1377
80 Ga0207663_10016023 3300025916 Bacteria 4148
81 Ga0207662_10008369 3300025918 Bacteria 5663
82 Ga0207662_10157529 3300025918 Bacteria 1449
83 Ga0207657_10113626 3300025919 Bacteria 2234
84 Ga0207652_10040830 3300025921 Bacteria 3941
85 Ga0207700_10018489 3300025928 Bacteria 4685
86 Ga0207700_10073298 3300025928 Bacteria 2644
87 Ga0207700_10150521 3300025928 Bacteria 1922
88 Ga0207664_10132040 3300025929 Bacteria 2103
89 Ga0207644_10017641 3300025931 Bacteria 4826
90 Ga0207644_10160893 3300025931 Bacteria 1745
91 Ga0207706_10052845 3300025933 Bacteria 3587
92 Ga0207686_10063056 3300025934 Bacteria 2356
93 Ga0207686_10170422 3300025934 Bacteria 1535
94 Ga0207670_10000767 3300025936 Bacteria 16891
95 Ga0207670_10023248 3300025936 Bacteria 3856
96 Ga0207669_10034027 3300025937 Bacteria 2883
97 Ga0207669_10068127 3300025937 Bacteria 2221
98 Ga0207704_10007316 3300025938 Bacteria 5208
99 Ga0207691_10009793 3300025940 Bacteria 9201
100 Ga0207691_10134439 3300025940 Bacteria 2183
101 Ga0207711_10003987 3300025941 Bacteria 12681
102 Ga0207689_10001886 3300025942 Bacteria 19839
103 Ga0207651_10021093 3300025960 Bacteria 3950
104 Ga0207668_10144887 3300025972 Bacteria 1831
105 Ga0207668_10156693 3300025972 Bacteria 1770
106 Ga0207640_10079071 3300025981 Bacteria 2241
107 Ga0207678_10002538 3300026067 Bacteria 16637
108 Ga0207708_10010225 3300026075 Bacteria 6966
109 Ga0207708_10198957 3300026075 Bacteria 1598
110 Ga0207641_10041739 3300026088 Bacteria 3846
111 Ga0207641_10102387 3300026088 Bacteria 2525
112 Ga0207648_10002918 3300026089 Bacteria 18098
113 Ga0207676_10013687 3300026095 Bacteria 5825
114 Ga0207676_10159633 3300026095 Bacteria 1952
115 Ga0207674_10040476 3300026116 Bacteria 4827
116 Ga0207675_100011232 3300026118 Bacteria 8388
117 Ga0207675_100183742 3300026118 Bacteria 2003
118 Ga0207683_10267146 3300026121 Bacteria 1562
119 Ga0268266_10000701 3300028379 Bacteria 45203
120 Ga0268266_10208124 3300028379 Unclassified 1793
121 Ga0268264_10046768 3300028381 Bacteria 3595
122 Ga0268264_10058108 3300028381 Bacteria 3238
123 Ga0265340_10007281 3300031247 Bacteria 6015
124 Ga0265327_10041796 3300031251 Bacteria 2467
125 Ga0265316_10250637 3300031344 Bacteria 1300
126 Ga0373930_0005135 3300034816 Bacteria 2163
127 Ga0373929_0010845 3300035085 Bacteria 1709
128 Ga0373939_0022085 3300035114 Bacteria 1750
129 Ga0373953_0051300 3300035117 Bacteria 1668
130 Ga0373942_0010578 3300035207 Bacteria 2173
131 Ga0373961_0011349 3300035241 Bacteria 2210
132 Ga0373931_0004928 3300035691 Bacteria 6137
133 Ga0373931_0005373 3300035691 Bacteria 5915
134 Ga0373935_0100228 3300035692 Unclassified 1908
135 Ga0373927_0193119 3300035695 Bacteria 1336
136 Ga0373947_0049144 3300035725 Bacteria 2532
137 Ga0373937_0136310 3300036401 Bacteria 2295
138 Ga0316584_0027571 3300036712 Bacteria 4182
139 Ga0316584_0042671 3300036712 Bacteria 3381
140 Ga0373925_0349171 3300037068 Bacteria 1201
141 Ga0395898_0081151 3300037466 Bacteria 3127
142 Ga0436364_1114964 3300037853 Bacteria 1245
143 Ga0436364_1518270 3300037853 Bacteria 2918
144 Ga0395901_0522777 3300038443 Bacteria 1205
145 Ga0436365_0486444 3300039437 Bacteria 2751
146 Ga0436365_0856633 3300039437 Bacteria 3322
147 Ga0436365_1001326 3300039437 Bacteria 17894
148 Ga0436365_1293158 3300039437 Bacteria 4328
149 Ga0436365_1699589 3300039437 Bacteria 12154
150 Ga0436360_0456695 3300039438 Unclassified 2020
151 Ga0436363_1323247 3300039450 Bacteria 6028
152 Ga0436363_1564272 3300039450 Bacteria 3204
153 Ga0436362_1002739 3300039453 Bacteria 3460
154 Ga0439465_0035424 3300041413 Bacteria 1600
155 Ga0451837_1583339 3300041494 Bacteria 1923
156 Ga0451853_2733473 3300041512 Bacteria 2081
157 Ga0451577_0341041 3300042876 Bacteria 1359
158 Ga0466961_0074561 3300044693 Bacteria 2152
159 Ga0466963_0002762 3300044694 Bacteria 9894
160 Ga0466963_0016201 3300044694 Bacteria 4633
161 Ga0466968_0055383 3300044735 Bacteria 1702
162 Ga0466970_0119562 3300044765 Bacteria 1443
163 Ga0466957_0031319 3300044842 Bacteria 3178
164 Ga0466959_0094104 3300045049 Bacteria 2150
165 Ga0466959_0169078 3300045049 Bacteria 1534
166 Ga0466958_0005271 3300045836 Bacteria 6931
167 Ga0466958_0034233 3300045836 Bacteria 3030
168 Ga0466967_0033819 3300045976 Bacteria 4332
169 Ga0495629_0160100 3300046459 Bacteria 1564
170 Ga0495629_0168843 3300046459 Unclassified 1519
171 Ga0495653_0177362 3300046463 Bacteria 1465
172 Ga0495639_0069858 3300046475 Bacteria 1621
173 Ga0495664_0139207 3300046477 Bacteria 1471
174 Ga0495628_0032870 3300046516 Bacteria 4184
175 Ga0495640_0041185 3300046533 Bacteria 3229
176 Ga0495667_0100048 3300046559 Bacteria 1876
177 Ga0495635_0037983 3300046663 Bacteria 3333
178 Ga0495657_0032513 3300046675 Bacteria 3639
179 Ga0495624_0152237 3300046690 Unclassified 1415
180 Ga0495600_0068906 3300046809 Bacteria 2312
181 Ga0495604_0182149 3300047317 Bacteria 1469
182 Ga0495680_0060891 3300047322 Bacteria 2906
183 Ga0495684_0179215 3300047471 Bacteria 1571
184 Ga0496102_0005296 3300048905 Bacteria 10950
185 Ga0496103_0003525 3300048906 Bacteria 9562
186 Ga0496104_0018560 3300048907 Bacteria 6348
187 Ga0496105_0011313 3300048908 Bacteria 7046
188 Ga0496106_0053838 3300048909 Bacteria 3039
189 Ga0496107_0038344 3300048910 Bacteria 3438
190 Ga0496108_0030435 3300048911 Bacteria 4474
191 Ga0496108_0070306 3300048911 Bacteria 2954
192 Ga0496108_0088939 3300048911 Bacteria 2624
193 Ga0496108_0248336 3300048911 Bacteria 1548
194 Ga0496109_0013759 3300048912 Bacteria 7029
195 Ga0496110_0080102 3300048913 Bacteria 2909
196 Ga0496111_0284661 3300048914 Bacteria 1226
197 Ga0496112_0008431 3300048915 Bacteria 9230
198 Ga0496113_0041317 3300048916 Bacteria 3402
199 Ga0496114_0179104 3300048917 Bacteria 1850
200 Ga0496114_0403328 3300048917 Bacteria 1211
201 Ga0496115_0129796 3300048918 Bacteria 2077
202 Ga0496119_0165943 3300048922 Bacteria 1170
203 Ga0501033_0067387 3300049570 Bacteria 2632
204 Ga0501033_0081787 3300049570 Bacteria 2369
205 Ga0501038_0027147 3300049574 Bacteria 5096
206 Ga0501043_0081355 3300049579 Bacteria 2545
207 Ga0501046_0023177 3300049580 Bacteria 5111
208 Ga0501070_0041130 3300049586 Bacteria 3851
209 Ga0501070_0044818 3300049586 Bacteria 3679
210 Ga0501035_0003432 3300049822 Bacteria 15159
211 nmdc:mga03n38_78850_c1 3300050490 Bacteria 1542
212 nmdc:mga0yw44_15545_c1 3300050492 Bacteria 4080
213 nmdc:mga0yw44_4824_c1 3300050492 Bacteria 6262
214 nmdc:mga0yw44_81389_c1 3300050492 Bacteria 2030
215 nmdc:mga06z11_15699_c1 3300050494 Bacteria 3387
216 nmdc:mga06z11_46836_c1 3300050494 Bacteria 2193
217 nmdc:mga0n895_97562_c1 3300050512 Bacteria 2945
218 nmdc:mga0rr50_114941_c1 3300050513 Bacteria 2135
219 nmdc:mga0a205_1597_c2 3300050515 Bacteria 18093
220 Ga0495601_0028183 3300053077 Bacteria 3477
221 Ga0495601_0042368 3300053077 Bacteria 2856
222 Ga0495601_0187039 3300053077 Bacteria 1354
223 Ga0495612_0102756 3300053078 Bacteria 1218
224 Ga0495595_0001728 3300053084 Bacteria 8542
225 Ga0495595_0008507 3300053084 Bacteria 4214
226 Ga0495619_0008692 3300053085 Bacteria 6423
227 Ga0466962_0059428 3300061719 Bacteria 1825
228 2585997126 2585427633 Bacteria 6413184
229 2586001726 2585427634 Bacteria 6455027
230 2644166837 2643221629 Bacteria 5850260
231 2644349351 2643221662 Bacteria 5851492
232 2671695492 2671180139 Bacteria 4196045
233 2793070014 2791355197 Bacteria 8420563
234 2889306225 2889306138 Bacteria 6358934
235 3005479538 3005474847 Bacteria 9259049
236 Ga0070675_100184790
237 JGI25165J46597_1004470
238 Ga0070690_100011052
239 Ga0068868_100112906
240 Ga0070689_100011172
241 Ga0070668_100264629
242 Ga0070673_100015824
243 Ga0070688_100005842
244 Ga0070667_100043554
245 Ga0070714_100023355
246 Ga0070714_100032386
247 Ga0070714_100098175
248 Ga0070714_100363719
249 Ga0070713_100040703
250 Ga0070700_100029310
251 Ga0070700_100044282
252 Ga0070694_100095653
253 Ga0070663_100017978
254 Ga0070678_100036694
255 Ga0070681_10059660
256 Ga0070685_10027374
257 Ga0070684_100012119
258 Ga0070665_100014488
259 Ga0068856_100297389
260 Ga0070702_100039690
261 Ga0068852_100061472
262 Ga0068864_100030429
263 Ga0068861_100046834
264 Ga0068870_10003224
265 Ga0068863_100118545
266 Ga0068863_100158089
267 Ga0068860_100006259
268 Ga0068860_100125045
269 Ga0081538_10012399
270 Ga0070717_10007673
271 Ga0075365_10018524
272 Ga0075365_10045219
273 Ga0075365_10169082
274 Ga0070715_10087590
275 Ga0070712_100010737
276 Ga0070712_100269003
277 Ga0075367_10062722
278 Ga0075367_10078589
279 Ga0075366_10033427
280 Ga0097621_100032545
281 Ga0068871_100112161
282 Ga0075433_10001378
283 Ga0075434_100029421
284 Ga0075435_100005134
285 Ga0099794_10016636
286 Ga0105242_10243569
287 Ga0105248_10145216
288 Ga0105248_10462623
289 Ga0105237_10000124
290 Ga0105239_10010895
291 Ga0105239_10146946
292 Ga0105239_10155267
293 Ga0105239_10411223
294 Ga0105246_10135603
295 Ga0163163_10282529
296 Ga0157379_10065042
297 Ga0157379_10138230
298 Ga0157376_10100156
299 Ga0213876_10019331
300 Ga0213876_10024232
301 Ga0209233_1000489
302 Ga0209758_1002899
303 Ga0207642_10012043
304 Ga0207710_10006666
305 Ga0207688_10000136
306 Ga0207688_10133142
307 Ga0207680_10019432
308 Ga0207643_10002615
309 Ga0207684_10163178
310 Ga0207707_10045643
311 Ga0207671_10000095
312 Ga0207693_10050096
313 Ga0207693_10240778
314 Ga0207693_10254874
315 Ga0207663_10016023
316 Ga0207662_10008369
317 Ga0207662_10157529
318 Ga0207657_10113626
319 Ga0207652_10040830
320 Ga0207700_10018489
321 Ga0207700_10073298
322 Ga0207700_10150521
323 Ga0207664_10132040
324 Ga0207644_10017641
325 Ga0207644_10160893
326 Ga0207706_10052845
327 Ga0207686_10063056
328 Ga0207686_10170422
329 Ga0207670_10000767
330 Ga0207670_10023248
331 Ga0207669_10034027
332 Ga0207669_10068127
333 Ga0207704_10007316
334 Ga0207691_10009793
335 Ga0207691_10134439
336 Ga0207711_10003987
337 Ga0207689_10001886
338 Ga0207651_10021093
339 Ga0207668_10144887
340 Ga0207668_10156693
341 Ga0207640_10079071
342 Ga0207678_10002538
343 Ga0207708_10010225
344 Ga0207708_10198957
345 Ga0207641_10041739
346 Ga0207641_10102387
347 Ga0207648_10002918
348 Ga0207676_10013687
349 Ga0207676_10159633
350 Ga0207674_10040476
351 Ga0207675_100011232
352 Ga0207675_100183742
353 Ga0207683_10267146
354 Ga0268266_10000701
355 Ga0268266_10208124
356 Ga0268264_10046768
357 Ga0268264_10058108
358 Ga0265340_10007281
359 Ga0265327_10041796
360 Ga0265316_10250637
361 Ga0373930_0005135
362 Ga0373929_0010845
363 Ga0373939_0022085
364 Ga0373953_0051300
365 Ga0373942_0010578
366 Ga0373961_0011349
367 Ga0373931_0004928
368 Ga0373931_0005373
369 Ga0373935_0100228
370 Ga0373927_0193119
371 Ga0373947_0049144
372 Ga0373937_0136310
373 Ga0316584_0027571
374 Ga0316584_0042671
375 Ga0373925_0349171
376 Ga0395898_0081151
377 Ga0436364_1114964
378 Ga0436364_1518270
379 Ga0395901_0522777
380 Ga0436365_0486444
381 Ga0436365_0856633
382 Ga0436365_1001326
383 Ga0436365_1293158
384 Ga0436365_1699589
385 Ga0436360_0456695
386 Ga0436363_1323247
387 Ga0436363_1564272
388 Ga0436362_1002739
389 Ga0439465_0035424
390 Ga0451837_1583339
391 Ga0451853_2733473
392 Ga0451577_0341041
393 Ga0466961_0074561
394 Ga0466963_0002762
395 Ga0466963_0016201
396 Ga0466968_0055383
397 Ga0466970_0119562
398 Ga0466957_0031319
399 Ga0466959_0094104
400 Ga0466959_0169078
401 Ga0466958_0005271
402 Ga0466958_0034233
403 Ga0466967_0033819
404 Ga0495629_0160100
405 Ga0495629_0168843
406 Ga0495653_0177362
407 Ga0495639_0069858
408 Ga0495664_0139207
409 Ga0495628_0032870
410 Ga0495640_0041185
411 Ga0495667_0100048
412 Ga0495635_0037983
413 Ga0495657_0032513
414 Ga0495624_0152237
415 Ga0495600_0068906
416 Ga0495604_0182149
417 Ga0495680_0060891
418 Ga0495684_0179215
419 Ga0496102_0005296
420 Ga0496103_0003525
421 Ga0496104_0018560
422 Ga0496105_0011313
423 Ga0496106_0053838
424 Ga0496107_0038344
425 Ga0496108_0030435
426 Ga0496108_0070306
427 Ga0496108_0088939
428 Ga0496108_0248336
429 Ga0496109_0013759
430 Ga0496110_0080102
431 Ga0496111_0284661
432 Ga0496112_0008431
433 Ga0496113_0041317
434 Ga0496114_0179104
435 Ga0496114_0403328
436 Ga0496115_0129796
437 Ga0496119_0165943
438 Ga0501033_0067387
439 Ga0501033_0081787
440 Ga0501038_0027147
441 Ga0501043_0081355
442 Ga0501046_0023177
443 Ga0501070_0041130
444 Ga0501070_0044818
445 Ga0501035_0003432
446 nmdc:mga03n38_78850_c1
447 nmdc:mga0yw44_15545_c1
448 nmdc:mga0yw44_4824_c1
449 nmdc:mga0yw44_81389_c1
450 nmdc:mga06z11_15699_c1
451 nmdc:mga06z11_46836_c1
452 nmdc:mga0n895_97562_c1
453 nmdc:mga0rr50_114941_c1
454 nmdc:mga0a205_1597_c2
455 Ga0495601_0028183
456 Ga0495601_0042368
457 Ga0495601_0187039
458 Ga0495612_0102756
459 Ga0495595_0001728
460 Ga0495595_0008507
461 Ga0495619_0008692
462 Ga0466962_0059428
463 2585997126
464 2586001726
465 2644166837
466 2644349351
467 2671695492
468 2793070014
469 2889306225
470 3005479538

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01244

Peptidase_M19

Membrane dipeptidase (Peptidase family M19)

8

359

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3fdg-assembly1.cif.gz_A the crystal structure of the dipeptidase ac, metallo peptidase. merops family m19 0.9798 3 350
3fdg-assembly1.cif.gz_A the crystal structure of the dipeptidase ac, metallo peptidase. merops family m19 0.9741 3 350
3ly0-assembly1.cif.gz_A crystal structure of metallo peptidase from rhodobacter sphaeroides liganded with phosphinate mimic of dipeptide l-ala-d-ala 0.967 3 349
3fdg-assembly1.cif.gz_B the crystal structure of the dipeptidase ac, metallo peptidase. merops family m19 0.9659 3 350
3fdg-assembly1.cif.gz_B the crystal structure of the dipeptidase ac, metallo peptidase. merops family m19 0.9604 3 350
ID Description Score Start End Superfamily
3fdgA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9798 3 350 3.20.20.140
3fdgA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9741 3 350 3.20.20.140
af_F1QFU9_23_390_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9124 5 348 3.20.20.140
3nehA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9034 5 346 3.20.20.140
5nruA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.8985 5 348 3.20.20.140
ID Description Score Start End GO Terms
AF-A0A528N5T7-F1-model_v4 Peptidase 1.003 221 322 GO:0006508
GO:0070573
AF-A0A530A3Y0-F1-model_v4 deleted 1.001 199 350
AF-A0A529NTV9-F1-model_v4 Peptidase 1.001 229 350 GO:0006508
GO:0070573
AF-A0A532F184-F1-model_v4 Peptidase 0.9996 181 350 GO:0006508
GO:0070573
AF-A0A352SPU9-F1-model_v4 Peptidase M19 0.9988 222 332 GO:0006508
GO:0070573

Map