F347699

General Info

Members Datasets Scaffolds Average Seq Length
235 170 226 216

Family's Representative Sequence

Representative Sequence 3300003771|Ga0055526_1001874|Ga0055526_10018749
Length 253
Sequence MSDGGCTGAAVRTQRRAAPSKSSPLGGQRITRSEKRGGLEDRPQSLGEEIANSVSHGVALLAAALAAPFLVVASARQGDAIDIAGVSVFTASMVLLYFTSMLYHALPAVRAARAKSLFQVLDHGAIYLLIAGTYTPFTLGVLRGPWGWTLFGLVWAMALAGVAVKAVAGIRYPRVSTALYLAMGWIAVIAVKPMLELIPGWGLFWLLAGGLLYTLGVGFFATDSRLRYGHFIWHLFVAAGTTCHCVAVLYYAS

Samples

Sample ID Description Type Environment
1 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
2 2511231002 Polaromonas sp. CF318 Isolate Rhizosphere
3 2599185292 Achromobacter sp. NFACC18-2 Isolate Rhizoplane
4 2643221569 Achromobacter sp. Root565 Isolate Unclassified
5 2643221594 Achromobacter sp. Root170 Isolate Unclassified
6 2643221621 Achromobacter sp. Root83 Isolate Unclassified
7 2808606395 Achromobacter sp. SLBN-14 Isolate Unclassified
8 2857537821 Achromobacter sp. R-71975 Isolate Unclassified
9 2858950400 Achromobacter sp. K91 Isolate Unclassified
10 2941479691
11 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
12 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
13 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
14 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
15 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
16 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
17 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
18 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
19 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
20 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
21 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
22 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
23 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
24 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
25 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
26 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
27 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
28 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
29 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
30 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
31 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
32 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
33 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
34 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
35 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
36 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
37 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
38 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
39 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
40 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
41 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
42 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
43 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
44 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
45 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
46 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
47 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
48 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
49 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
50 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
51 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
52 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
53 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
54 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
56 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
57 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
58 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
59 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
60 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
61 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
63 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
64 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
65 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
66 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
67 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
68 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
69 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
70 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
71 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
72 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
73 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
74 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
75 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
76 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
77 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
78 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
80 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
81 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
82 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
83 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
84 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
102 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
103 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
104 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
105 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
106 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
107 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
108 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
109 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
110 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
111 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
112 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
113 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
114 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
115 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
116 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
117 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
118 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
119 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
120 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
121 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
122 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
123 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
124 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
125 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
126 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
127 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
128 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
129 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
130 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
131 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
132 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
133 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
134 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
135 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
136 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
137 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
138 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
139 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
140 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
141 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
142 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
143 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
144 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
145 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
146 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
147 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
148 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
149 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
150 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
151 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
152 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
153 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
154 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
156 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
157 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
158 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
159 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
160 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
161 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
162 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
163 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
164 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
165 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
166 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
167 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
168 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
169 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
170 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.17
Metatranscriptomes 0
Isolates 3.83

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 28.09
Nodule 0
Rhizoplane 0.43
Rhizosphere 55.32
Stem 0
Stem Tuber 0
Unclassified 16.17

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 MBSR1b_contig_4788928 2162886012 Bacteria 829
2 JGI25155J39150_1000008 3300002704 Bacteria 236146
3 JGI25156J39149_1000002 3300002705 Bacteria 343501
4 JGI25154J39366_1000010 3300002738 Bacteria 297985
5 JGI25157J39369_1000001 3300002741 Bacteria 363277
6 JGI25159J45721_1012879 3300002987 Bacteria 1967
7 JGI25159J45721_1013433 3300002987 Bacteria 1894
8 JGI25151J46595_10004011 3300003187 Bacteria 7910
9 JGI25151J46595_10014150 3300003187 Bacteria 3567
10 JGI25160J50197_1000179 3300003354 Bacteria 53666
11 JGI25161J50226_1000076 3300003374 Bacteria 84478
12 Ga0055526_1001874 3300003771 Bacteria 14567
13 Ga0055537_1000102 3300003773 Bacteria 63809
14 Ga0055537_1011076 3300003773 Bacteria 1855
15 Ga0055524_1000093 3300003775 Bacteria 111953
16 Ga0055536_1008777 3300003781 Bacteria 4285
17 Ga0055534_1007489 3300003784 Bacteria 2591
18 Ga0055528_1000987 3300003790 Bacteria 18893
19 Ga0055530_10000285 3300003791 Bacteria 46054
20 Ga0055530_10029087 3300003791 Bacteria 1482
21 Ga0055530_10063192 3300003791 Bacteria 819
22 Ga0055540_1000196 3300003792 Bacteria 58476
23 Ga0055531_10004916 3300003794 Bacteria 7947
24 Ga0055543_1000118 3300004625 Bacteria 66892
25 Ga0065165_1004571 3300005262 Bacteria 8445
26 Ga0065165_1011775 3300005262 Bacteria 3609
27 Ga0065165_1076349 3300005262 Bacteria 879
28 Ga0070676_10187701 3300005328 Bacteria 1348
29 Ga0070690_100559488 3300005330 Bacteria 863
30 Ga0070670_100159435 3300005331 Bacteria 1955
31 Ga0070668_100304902 3300005347 Bacteria 1336
32 Ga0070669_100816588 3300005353 Bacteria 793
33 Ga0070674_100214764 3300005356 Bacteria 1493
34 Ga0070667_100031288 3300005367 Bacteria 4437
35 Ga0070708_100079048 3300005445 Bacteria 2974
36 Ga0070708_100379650 3300005445 Bacteria 1332
37 Ga0070708_100579100 3300005445 Unclassified 1058
38 Ga0070708_100853538 3300005445 Bacteria 855
39 Ga0070706_100002382 3300005467 Bacteria 18963
40 Ga0070706_100165935 3300005467 Bacteria 2062
41 Ga0070706_100218498 3300005467 Bacteria 1779
42 Ga0070706_100636286 3300005467 Unclassified 990
43 Ga0070707_100454987 3300005468 Bacteria 1241
44 Ga0070698_100011388 3300005471 Bacteria 9436
45 Ga0070698_100041031 3300005471 Bacteria 4754
46 Ga0070699_100000262 3300005518 Bacteria 50713
47 Ga0070699_100406182 3300005518 Bacteria 1232
48 Ga0070699_100436374 3300005518 Bacteria 1187
49 Ga0070699_100636573 3300005518 Unclassified 973
50 Ga0070697_100003725 3300005536 Bacteria 11705
51 Ga0068853_100101049 3300005539 Bacteria 2550
52 Ga0070693_100475268 3300005547 Bacteria 882
53 Ga0070665_100056013 3300005548 Bacteria 3953
54 Ga0070664_100523926 3300005564 Bacteria 1094
55 Ga0068860_100087755 3300005843 Bacteria 2961
56 Ga0075364_10076991 3300006051 Bacteria 2201
57 Ga0075432_10040320 3300006058 Bacteria 1630
58 Ga0070715_10000005 3300006163 Bacteria 298716
59 Ga0070716_100000037 3300006173 Bacteria 55670
60 Ga0075362_10031760 3300006177 Bacteria 2287
61 Ga0075362_10216598 3300006177 Bacteria 935
62 Ga0075366_10000666 3300006195 Bacteria 16183
63 Ga0075366_10074142 3300006195 Bacteria 2029
64 Ga0097621_100825681 3300006237 Unclassified 860
65 Ga0075370_10113316 3300006353 Bacteria 1576
66 Ga0075428_100009852 3300006844 Bacteria 10620
67 Ga0075428_100031121 3300006844 Bacteria 5900
68 Ga0075430_100432549 3300006846 Bacteria 1086
69 Ga0075436_100097465 3300006914 Bacteria 2045
70 Ga0075435_100293813 3300007076 Bacteria 1389
71 Ga0099794_10020707 3300007265 Unclassified 2979
72 Ga0111539_10105989 3300009094 Bacteria 3298
73 Ga0111539_10140046 3300009094 Bacteria 2832
74 Ga0105242_10002789 3300009176 Bacteria 13684
75 Ga0105248_10374137 3300009177 Bacteria 1604
76 Ga0157378_10008426 3300013297 Bacteria 8982
77 Ga0163162_10056428 3300013306 Unclassified 3955
78 Ga0157375_10620202 3300013308 Unclassified 1240
79 Ga0213876_10000038 3300021384 Bacteria 182431
80 Ga0213876_10000098 3300021384 Bacteria 98314
81 Ga0209435_100001 3300025206 Bacteria 1424171
82 Ga0207425_1017951 3300025245 Bacteria 1543
83 Ga0209646_1000001 3300025246 Bacteria 3092932
84 Ga0209026_1000001 3300025250 Bacteria 1228671
85 Ga0209759_1000001 3300025256 Bacteria 2799452
86 Ga0209129_1009431 3300025258 Bacteria 2573
87 Ga0209129_1020805 3300025258 Bacteria 1214
88 Ga0209565_1000161 3300025263 Bacteria 90019
89 Ga0209565_1000623 3300025263 Bacteria 23359
90 Ga0209673_1000391 3300025273 Bacteria 78867
91 Ga0209130_1000118 3300025284 Bacteria 129005
92 Ga0209130_1000359 3300025284 Bacteria 52040
93 Ga0209675_1000128 3300025291 Bacteria 103111
94 Ga0209676_1000054 3300025292 Bacteria 365890
95 Ga0209676_1003176 3300025292 Bacteria 10453
96 Ga0209025_1002172 3300025294 Bacteria 21810
97 Ga0209025_1005429 3300025294 Bacteria 10402
98 Ga0209025_1014853 3300025294 Bacteria 4747
99 Ga0209025_1041707 3300025294 Bacteria 1961
100 Ga0209564_1002072 3300025295 Bacteria 17240
101 Ga0209050_1000066 3300025298 Bacteria 305458
102 Ga0209050_1001697 3300025298 Bacteria 22023
103 Ga0209050_1004302 3300025298 Bacteria 9724
104 Ga0209050_1012134 3300025298 Bacteria 3991
105 Ga0209256_1000003 3300025299 Bacteria 1661127
106 Ga0207426_1000197 3300025302 Bacteria 146366
107 Ga0209051_1000044 3300025303 Bacteria 305458
108 Ga0209051_1011234 3300025303 Bacteria 4441
109 Ga0209051_1037528 3300025303 Bacteria 1775
110 Ga0209257_1000082 3300025304 Bacteria 305458
111 Ga0209257_1058998 3300025304 Bacteria 1050
112 Ga0207685_10000065 3300025905 Bacteria 28161
113 Ga0207645_10200150 3300025907 Unclassified 1314
114 Ga0207684_10179563 3300025910 Bacteria 1825
115 Ga0207684_10281836 3300025910 Unclassified 1433
116 Ga0207646_10101149 3300025922 Bacteria 2584
117 Ga0207650_10200190 3300025925 Bacteria 1599
118 Ga0207686_10000117 3300025934 Bacteria 64560
119 Ga0207709_10206608 3300025935 Bacteria 1406
120 Ga0207704_10611140 3300025938 Bacteria 894
121 Ga0207665_10000106 3300025939 Bacteria 55001
122 Ga0207711_10457191 3300025941 Bacteria 1189
123 Ga0207668_10044691 3300025972 Bacteria 3015
124 Ga0207658_10191849 3300025986 Bacteria 1699
125 Ga0207677_10280669 3300026023 Unclassified 1367
126 Ga0207639_10294405 3300026041 Bacteria 1432
127 Ga0268266_10276813 3300028379 Bacteria 1559
128 Ga0265330_10003898 3300031235 Bacteria 7676
129 Ga0265332_10001643 3300031238 Bacteria 12212
130 Ga0265325_10007171 3300031241 Bacteria 6703
131 Ga0265329_10006368 3300031242 Bacteria 4686
132 Ga0265339_10170071 3300031249 Bacteria 1091
133 Ga0265331_10001128 3300031250 Bacteria 20435
134 Ga0265327_10011141 3300031251 Bacteria 6237
135 Ga0265316_10013678 3300031344 Bacteria 7197
136 Ga0307513_10000021 3300031456 Bacteria 228078
137 Ga0307408_100004983 3300031548 Bacteria 8918
138 Ga0316579_10020893 3300031691 Bacteria 2911
139 Ga0316579_10198560 3300031691 Bacteria 970
140 Ga0265314_10019561 3300031711 Bacteria 5244
141 Ga0316576_10005022 3300031727 Bacteria 8017
142 Ga0316576_10036692 3300031727 Bacteria 3504
143 Ga0316576_10054989 3300031727 Unclassified 2904
144 Ga0316578_10067725 3300031728 Bacteria 2110
145 Ga0307516_10025266 3300031730 Bacteria 6050
146 Ga0316577_10021598 3300031733 Bacteria 3572
147 Ga0316577_10039403 3300031733 Bacteria 2643
148 Ga0307406_10019765 3300031901 Bacteria 3957
149 Ga0307406_10484455 3300031901 Bacteria 1000
150 Ga0307412_10056570 3300031911 Bacteria 2614
151 Ga0307411_10112915 3300032005 Bacteria 1949
152 Ga0307415_100134484 3300032126 Bacteria 1878
153 Ga0316580_10002845 3300032139 Bacteria 4832
154 Ga0373943_0226347 3300035170 Bacteria 1043
155 Ga0373955_0251721 3300035172 Bacteria 1059
156 Ga0373924_0006904 3300035410 Bacteria 4084
157 Ga0373927_0004662 3300035695 Bacteria 9556
158 Ga0373927_0102042 3300035695 Unclassified 1866
159 Ga0373947_0529143 3300035725 Bacteria 802
160 Ga0373937_0697892 3300036401 Bacteria 961
161 Ga0316582_0002244 3300036647 Bacteria 8993
162 Ga0373925_0701219 3300037068 Bacteria 835
163 Ga0316581_0037155 3300037588 Bacteria 1479
164 Ga0436365_0038900 3300039437 Bacteria 45987
165 Ga0436365_1023949 3300039437 Bacteria 126686
166 Ga0451853_1223754 3300041512 Bacteria 2672
167 Ga0439446_0043621 3300042156 Unclassified 1326
168 Ga0451577_0000464 3300042876 Bacteria 70317
169 Ga0451577_0005608 3300042876 Bacteria 12764
170 Ga0451577_0009328 3300042876 Bacteria 9459
171 Ga0451577_0017256 3300042876 Bacteria 6672
172 Ga0451577_0089275 3300042876 Bacteria 2751
173 Ga0451577_0128089 3300042876 Bacteria 2276
174 Ga0451577_0227220 3300042876 Bacteria 1687
175 Ga0453683_0001029 3300044673 Bacteria 26187
176 Ga0453683_0153425 3300044673 Unclassified 1456
177 Ga0453684_0000351 3300044712 Bacteria 191794
178 Ga0453684_0000356 3300044712 Bacteria 189329
179 Ga0453684_0006699 3300044712 Bacteria 21738
180 Ga0453684_0016334 3300044712 Bacteria 11619
181 Ga0453684_0018283 3300044712 Bacteria 10771
182 Ga0453684_0061006 3300044712 Bacteria 4844
183 Ga0453684_0283913 3300044712 Bacteria 1887
184 Ga0451576_0001431 3300045051 Bacteria 40815
185 Ga0495662_0186078 3300046476 Bacteria 1024
186 Ga0495618_0112455 3300046514 Bacteria 1744
187 Ga0495621_0181598 3300046539 Unclassified 840
188 Ga0495600_0041888 3300046809 Bacteria 2985
189 Ga0495684_0255947 3300047471 Bacteria 1272
190 Ga0496116_0024984 3300048919 Bacteria 4402
191 Ga0496116_0138235 3300048919 Bacteria 1375
192 Ga0496117_0084144 3300048920 Bacteria 2077
193 Ga0496118_0006448 3300048921 Bacteria 12891
194 Ga0496118_0039390 3300048921 Bacteria 3772
195 Ga0496119_0018195 3300048922 Bacteria 5246
196 Ga0496120_0031195 3300048923 Bacteria 3231
197 Ga0496121_0000145 3300048924 Bacteria 156655
198 Ga0496122_0000029 3300048925 Bacteria 336396
199 Ga0496122_0057199 3300048925 Bacteria 2899
200 Ga0496123_0000216 3300048926 Bacteria 117098
201 Ga0496123_0019221 3300048926 Bacteria 5391
202 Ga0496124_0062139 3300048927 Bacteria 3126
203 Ga0496124_0328621 3300048927 Bacteria 1091
204 Ga0496125_0001102 3300048928 Bacteria 41526
205 Ga0496126_0009523 3300048929 Bacteria 10304
206 Ga0501034_0303516 3300049571 Bacteria 1533
207 Ga0501225_0075004 3300049705 Bacteria 965
208 nmdc:mga00v17_138767_c1 3300050491 Bacteria 1558
209 nmdc:mga0k408_2645_c1 3300050493 Bacteria 9511
210 nmdc:mga0k408_93240_c1 3300050493 Bacteria 1770
211 nmdc:mga05p37_62917_c1 3300050507 Bacteria 4567
212 nmdc:mga0qj67_364127_c1 3300050509 Bacteria 1168
213 nmdc:mga08y16_105462_c1 3300050511 Bacteria 2934
214 nmdc:mga08y16_420385_c1 3300050511 Bacteria 1366
215 nmdc:mga0n895_1386120_c1 3300050512 Bacteria 672
216 nmdc:mga08x19_271186_c1 3300050514 Bacteria 1174
217 Ga0495595_0216861 3300053084 Bacteria 955
218 Ga0495619_0192930 3300053085 Bacteria 1410
219 Ga0500644_0004972 3300053088 Bacteria 3344
220 Ga0500651_0279074 3300053093 Bacteria 964
221 Ga0500641_0167054 3300053096 Bacteria 948
222 Ga0500593_000220 3300053117 Bacteria 23613
223 Ga0500655_012572 3300053133 Bacteria 1540
224 Ga0500645_000927 3300053730 Bacteria 16803
225 Ga0500645_004900 3300053730 Bacteria 5037
226 Ga0500645_032670 3300053730 Bacteria 1559

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300050512 nmdc:mga0n895_1386120_c1 nmdc:mga0n895_1386120_c1_12_545 176
2 3300031235 Ga0265330_10003898 Ga0265330_100038981 178
3 3300031238 Ga0265332_10001643 Ga0265332_100016436 178
4 3300031242 Ga0265329_10006368 Ga0265329_100063683 178
5 3300031249 Ga0265339_10170071 Ga0265339_101700712 178
6 3300031250 Ga0265331_10001128 Ga0265331_1000112811 178
7 3300031251 Ga0265327_10011141 Ga0265327_100111413 178
8 3300031344 Ga0265316_10013678 Ga0265316_100136788 178
9 3300031711 Ga0265314_10019561 Ga0265314_100195613 178
10 3300044673 Ga0453683_0153425 Ga0453683_0153425_676_1245 188
11 3300007265 Ga0099794_10020707 Ga0099794_100207072 189
12 3300050509 nmdc:mga0qj67_364127_c1 nmdc:mga0qj67_364127_c1_118_696 191
13 3300035725 Ga0373947_0529143 Ga0373947_0529143_191_778 192
14 3300042876 Ga0451577_0128089 Ga0451577_0128089_678_1307 192
15 3300006051 Ga0075364_10076991 Ga0075364_100769912 195
16 3300006177 Ga0075362_10031760 Ga0075362_100317602 195
17 3300006195 Ga0075366_10074142 Ga0075366_100741422 195
18 3300006353 Ga0075370_10113316 Ga0075370_101133162 195
19 3300050491 nmdc:mga00v17_138767_c1 nmdc:mga00v17_138767_c1_713_1474 195
20 3300050493 nmdc:mga0k408_93240_c1 nmdc:mga0k408_93240_c1_519_1280 195
21 3300003791 Ga0055530_10000285 Ga0055530_1000028526 196
22 3300003794 Ga0055531_10004916 Ga0055531_100049167 196
23 3300005518 Ga0070699_100406182 Ga0070699_1004061822 196
24 3300050511 nmdc:mga08y16_420385_c1 nmdc:mga08y16_420385_c1_12_659 196
25 3300035695 Ga0373927_0004662 Ga0373927_0004662_4745_5380 197
26 3300037068 Ga0373925_0701219 Ga0373925_0701219_31_666 197
27 3300042876 Ga0451577_0017256 Ga0451577_0017256_5516_6145 197
28 3300044712 Ga0453684_0061006 Ga0453684_0061006_40_669 197
29 3300002987 JGI25159J45721_1013433 JGI25159J45721_10134332 199
30 3300003187 JGI25151J46595_10014150 JGI25151J46595_100141502 199
31 3300003781 Ga0055536_1008777 Ga0055536_10087772 199
32 3300003792 Ga0055540_1000196 Ga0055540_100019636 199
33 3300006173 Ga0070716_100000037 Ga0070716_10000003745 199
34 3300025284 Ga0209130_1000118 Ga0209130_10001181 199
35 3300025292 Ga0209676_1000054 Ga0209676_1000054121 199
36 3300025294 Ga0209025_1005429 Ga0209025_10054292 199
37 3300025294 Ga0209025_1041707 Ga0209025_10417072 199
38 3300025298 Ga0209050_1000066 Ga0209050_1000066121 199
39 3300025303 Ga0209051_1000044 Ga0209051_1000044121 199
40 3300025304 Ga0209257_1000082 Ga0209257_1000082121 199
41 3300025939 Ga0207665_10000106 Ga0207665_1000010642 199
42 3300005262 Ga0065165_1011775 Ga0065165_10117753 200
43 3300005547 Ga0070693_100475268 Ga0070693_1004752681 200
44 3300013297 Ga0157378_10008426 Ga0157378_100084265 200
45 3300021384 Ga0213876_10000038 Ga0213876_1000003872 200
46 3300039437 Ga0436365_0038900 Ga0436365_0038900_28144_28797 200
47 3300053093 Ga0500651_0279074 Ga0500651_0279074_148_795 200
48 3300005330 Ga0070690_100559488 Ga0070690_1005594881 201
49 3300005445 Ga0070708_100579100 Ga0070708_1005791002 201
50 3300005467 Ga0070706_100002382 Ga0070706_1000023826 201
51 3300025910 Ga0207684_10281836 Ga0207684_102818361 201
52 3300031548 Ga0307408_100004983 Ga0307408_1000049836 201
53 3300031901 Ga0307406_10019765 Ga0307406_100197655 201
54 3300046539 Ga0495621_0181598 Ga0495621_0181598_168_803 201
55 3300053084 Ga0495595_0216861 Ga0495595_0216861_187_822 201
56 3300002704 JGI25155J39150_1000008 JGI25155J39150_1000008175 202
57 3300002705 JGI25156J39149_1000002 JGI25156J39149_100000279 202
58 3300002738 JGI25154J39366_1000010 JGI25154J39366_1000010238 202
59 3300002741 JGI25157J39369_1000001 JGI25157J39369_1000001100 202
60 3300002987 JGI25159J45721_1012879 JGI25159J45721_10128792 202
61 3300003187 JGI25151J46595_10004011 JGI25151J46595_100040113 202
62 3300003354 JGI25160J50197_1000179 JGI25160J50197_100017944 202
63 3300003374 JGI25161J50226_1000076 JGI25161J50226_100007671 202
64 3300003773 Ga0055537_1011076 Ga0055537_10110762 202
65 3300003791 Ga0055530_10029087 Ga0055530_100290872 202
66 3300004625 Ga0055543_1000118 Ga0055543_100011815 202
67 3300005262 Ga0065165_1004571 Ga0065165_10045712 202
68 3300005262 Ga0065165_1076349 Ga0065165_10763491 202
69 3300005539 Ga0068853_100101049 Ga0068853_1001010492 202
70 3300025206 Ga0209435_100001 Ga0209435_1000011216 202
71 3300025245 Ga0207425_1017951 Ga0207425_10179512 202
72 3300025246 Ga0209646_1000001 Ga0209646_10000011585 202
73 3300025250 Ga0209026_1000001 Ga0209026_1000001239 202
74 3300025256 Ga0209759_1000001 Ga0209759_10000011216 202
75 3300025258 Ga0209129_1009431 Ga0209129_10094313 202
76 3300025258 Ga0209129_1020805 Ga0209129_10208052 202
77 3300025263 Ga0209565_1000623 Ga0209565_10006235 202
78 3300025284 Ga0209130_1000359 Ga0209130_100035915 202
79 3300025292 Ga0209676_1003176 Ga0209676_10031769 202
80 3300025294 Ga0209025_1002172 Ga0209025_100217214 202
81 3300025294 Ga0209025_1014853 Ga0209025_10148533 202
82 3300025298 Ga0209050_1001697 Ga0209050_10016973 202
83 3300025298 Ga0209050_1004302 Ga0209050_10043024 202
84 3300025302 Ga0207426_1000197 Ga0207426_100019725 202
85 3300025303 Ga0209051_1037528 Ga0209051_10375282 202
86 3300025304 Ga0209257_1058998 Ga0209257_10589982 202
87 3300026041 Ga0207639_10294405 Ga0207639_102944051 202
88 3300050507 nmdc:mga05p37_62917_c1 nmdc:mga05p37_62917_c1_939_1601 202
89 3300053088 Ga0500644_0004972 Ga0500644_0004972_1297_1974 202
90 3300053117 Ga0500593_000220 Ga0500593_000220_13867_14544 202
91 3300053730 Ga0500645_000927 Ga0500645_000927_8283_8960 202
92 3300013308 Ga0157375_10620202 Ga0157375_106202021 203
93 3300053133 Ga0500655_012572 Ga0500655_012572_737_1390 203
94 3300042876 Ga0451577_0089275 Ga0451577_0089275_1621_2268 204
95 3300006846 Ga0075430_100432549 Ga0075430_1004325491 206
96 3300042876 Ga0451577_0000464 Ga0451577_0000464_48825_49457 206
97 3300042876 Ga0451577_0009328 Ga0451577_0009328_133_762 206
98 3300042876 Ga0451577_0227220 Ga0451577_0227220_864_1493 206
99 3300044712 Ga0453684_0000351 Ga0453684_0000351_134798_135430 206
100 3300044712 Ga0453684_0018283 Ga0453684_0018283_329_958 206
101 3300044712 Ga0453684_0283913 Ga0453684_0283913_275_919 206
102 3300047471 Ga0495684_0255947 Ga0495684_0255947_413_1048 206
103 3300053085 Ga0495619_0192930 Ga0495619_0192930_157_792 206
104 3300006844 Ga0075428_100031121 Ga0075428_1000311215 207
105 3300009094 Ga0111539_10140046 Ga0111539_101400462 207
106 3300005445 Ga0070708_100079048 Ga0070708_1000790482 209
107 3300005467 Ga0070706_100165935 Ga0070706_1001659353 209
108 3300005468 Ga0070707_100454987 Ga0070707_1004549871 209
109 3300005471 Ga0070698_100011388 Ga0070698_1000113882 209
110 3300005518 Ga0070699_100000262 Ga0070699_10000026245 209
111 3300005564 Ga0070664_100523926 Ga0070664_1005239262 209
112 3300005843 Ga0068860_100087755 Ga0068860_1000877551 209
113 3300006237 Ga0097621_100825681 Ga0097621_1008256811 209
114 3300009176 Ga0105242_10002789 Ga0105242_1000278912 209
115 3300009177 Ga0105248_10374137 Ga0105248_103741371 209
116 3300013306 Ga0163162_10056428 Ga0163162_100564283 209
117 3300021384 Ga0213876_10000098 Ga0213876_1000009864 209
118 3300025922 Ga0207646_10101149 Ga0207646_101011491 209
119 3300025934 Ga0207686_10000117 Ga0207686_1000011713 209
120 3300025935 Ga0207709_10206608 Ga0207709_102066082 209
121 3300025941 Ga0207711_10457191 Ga0207711_104571911 209
122 3300026023 Ga0207677_10280669 Ga0207677_102806691 209
123 3300031901 Ga0307406_10484455 Ga0307406_104844551 209
124 3300032005 Ga0307411_10112915 Ga0307411_101129152 209
125 3300032126 Ga0307415_100134484 Ga0307415_1001344842 209
126 3300035695 Ga0373927_0102042 Ga0373927_0102042_207_860 209
127 3300039437 Ga0436365_1023949 Ga0436365_1023949_40196_40849 209
128 3300046476 Ga0495662_0186078 Ga0495662_0186078_249_884 209
129 3300046514 Ga0495618_0112455 Ga0495618_0112455_302_997 209
130 3300046809 Ga0495600_0041888 Ga0495600_0041888_226_861 209
131 3300049705 Ga0501225_0075004 Ga0501225_0075004_88_741 209
132 iso_pu_bacteria 2599185292 2599905707 209
133 iso_pu_bacteria 2643221569 2643860593 209
134 iso_pu_bacteria 2643221594 2643981545 209
135 iso_pu_bacteria 2643221621 2644119671 209
136 iso_pu_bacteria 2808606395 2809035452 209
137 iso_pu_bacteria 2857537821 2857541165 209
138 iso_pu_bacteria 2858950400 2858953335 209
139 iso_pu_bacteria 2941479691 2941483653 209
140 3300003791 Ga0055530_10063192 Ga0055530_100631921 210
141 3300005353 Ga0070669_100816588 Ga0070669_1008165881 210
142 3300005445 Ga0070708_100379650 Ga0070708_1003796502 210
143 3300005445 Ga0070708_100853538 Ga0070708_1008535381 210
144 3300005467 Ga0070706_100636286 Ga0070706_1006362861 210
145 3300005518 Ga0070699_100636573 Ga0070699_1006365731 210
146 3300005536 Ga0070697_100003725 Ga0070697_10000372510 210
147 3300006163 Ga0070715_10000005 Ga0070715_10000005168 210
148 3300006844 Ga0075428_100009852 Ga0075428_1000098522 210
149 3300009094 Ga0111539_10105989 Ga0111539_101059894 210
150 3300025298 Ga0209050_1012134 Ga0209050_10121345 210
151 3300025303 Ga0209051_1011234 Ga0209051_10112347 210
152 3300025905 Ga0207685_10000065 Ga0207685_1000006512 210
153 3300031691 Ga0316579_10198560 Ga0316579_101985602 210
154 3300031727 Ga0316576_10005022 Ga0316576_100050226 210
155 3300031727 Ga0316576_10036692 Ga0316576_100366924 210
156 3300031727 Ga0316576_10054989 Ga0316576_100549891 210
157 3300031728 Ga0316578_10067725 Ga0316578_100677252 210
158 3300031733 Ga0316577_10021598 Ga0316577_100215984 210
159 3300031911 Ga0307412_10056570 Ga0307412_100565704 210
160 3300032139 Ga0316580_10002845 Ga0316580_100028452 210
161 3300042156 Ga0439446_0043621 Ga0439446_0043621_47_688 210
162 3300048919 Ga0496116_0024984 Ga0496116_0024984_3556_4200 210
163 3300048919 Ga0496116_0138235 Ga0496116_0138235_80_724 210
164 3300048920 Ga0496117_0084144 Ga0496117_0084144_177_821 210
165 3300048921 Ga0496118_0006448 Ga0496118_0006448_9687_10331 210
166 3300048921 Ga0496118_0039390 Ga0496118_0039390_218_862 210
167 3300048922 Ga0496119_0018195 Ga0496119_0018195_2854_3498 210
168 3300048923 Ga0496120_0031195 Ga0496120_0031195_1536_2180 210
169 3300048924 Ga0496121_0000145 Ga0496121_0000145_66971_67615 210
170 3300048925 Ga0496122_0000029 Ga0496122_0000029_282591_283235 210
171 3300048925 Ga0496122_0057199 Ga0496122_0057199_381_1025 210
172 3300048926 Ga0496123_0000216 Ga0496123_0000216_53162_53806 210
173 3300048926 Ga0496123_0019221 Ga0496123_0019221_3985_4629 210
174 3300048927 Ga0496124_0062139 Ga0496124_0062139_1260_1904 210
175 3300048927 Ga0496124_0328621 Ga0496124_0328621_221_865 210
176 3300048928 Ga0496125_0001102 Ga0496125_0001102_39173_39817 210
177 3300048929 Ga0496126_0009523 Ga0496126_0009523_9243_9887 210
178 3300049571 Ga0501034_0303516 Ga0501034_0303516_557_1213 210
179 3300050511 nmdc:mga08y16_105462_c1 nmdc:mga08y16_105462_c1_216_869 210
180 2162886012 MBSR1b_contig_4788928 MBSR1b_0636.00007490 211
181 3300003771 Ga0055526_1001874 Ga0055526_10018749 211
182 3300003773 Ga0055537_1000102 Ga0055537_100010244 211
183 3300003775 Ga0055524_1000093 Ga0055524_100009394 211
184 3300003784 Ga0055534_1007489 Ga0055534_10074892 211
185 3300003790 Ga0055528_1000987 Ga0055528_100098710 211
186 3300005328 Ga0070676_10187701 Ga0070676_101877011 211
187 3300005331 Ga0070670_100159435 Ga0070670_1001594352 211
188 3300005347 Ga0070668_100304902 Ga0070668_1003049022 211
189 3300005356 Ga0070674_100214764 Ga0070674_1002147641 211
190 3300005367 Ga0070667_100031288 Ga0070667_1000312884 211
191 3300005467 Ga0070706_100218498 Ga0070706_1002184982 211
192 3300005471 Ga0070698_100041031 Ga0070698_1000410313 211
193 3300005518 Ga0070699_100436374 Ga0070699_1004363741 211
194 3300005548 Ga0070665_100056013 Ga0070665_1000560131 211
195 3300006058 Ga0075432_10040320 Ga0075432_100403202 211
196 3300006177 Ga0075362_10216598 Ga0075362_102165981 211
197 3300006195 Ga0075366_10000666 Ga0075366_1000066613 211
198 3300006914 Ga0075436_100097465 Ga0075436_1000974652 211
199 3300007076 Ga0075435_100293813 Ga0075435_1002938132 211
200 3300025263 Ga0209565_1000161 Ga0209565_100016140 211
201 3300025273 Ga0209673_1000391 Ga0209673_100039115 211
202 3300025291 Ga0209675_1000128 Ga0209675_100012816 211
203 3300025295 Ga0209564_1002072 Ga0209564_10020725 211
204 3300025299 Ga0209256_1000003 Ga0209256_10000031394 211
205 3300025907 Ga0207645_10200150 Ga0207645_102001502 211
206 3300025910 Ga0207684_10179563 Ga0207684_101795632 211
207 3300025925 Ga0207650_10200190 Ga0207650_102001902 211
208 3300025938 Ga0207704_10611140 Ga0207704_106111402 211
209 3300025972 Ga0207668_10044691 Ga0207668_100446912 211
210 3300025986 Ga0207658_10191849 Ga0207658_101918492 211
211 3300028379 Ga0268266_10276813 Ga0268266_102768132 211
212 3300031241 Ga0265325_10007171 Ga0265325_100071719 211
213 3300031456 Ga0307513_10000021 Ga0307513_10000021170 211
214 3300031691 Ga0316579_10020893 Ga0316579_100208934 211
215 3300031730 Ga0307516_10025266 Ga0307516_100252663 211
216 3300031733 Ga0316577_10039403 Ga0316577_100394034 211
217 3300035170 Ga0373943_0226347 Ga0373943_0226347_173_826 211
218 3300035172 Ga0373955_0251721 Ga0373955_0251721_164_817 211
219 3300035410 Ga0373924_0006904 Ga0373924_0006904_1455_2090 211
220 3300036401 Ga0373937_0697892 Ga0373937_0697892_55_708 211
221 3300036647 Ga0316582_0002244 Ga0316582_0002244_2680_3387 211
222 3300037588 Ga0316581_0037155 Ga0316581_0037155_597_1304 211
223 3300041512 Ga0451853_1223754 Ga0451853_1223754_403_1083 211
224 3300042876 Ga0451577_0005608 Ga0451577_0005608_11359_12003 211
225 3300044673 Ga0453683_0001029 Ga0453683_0001029_17923_18567 211
226 3300044712 Ga0453684_0000356 Ga0453684_0000356_6190_6831 211
227 3300044712 Ga0453684_0006699 Ga0453684_0006699_13847_14491 211
228 3300044712 Ga0453684_0016334 Ga0453684_0016334_2121_2765 211
229 3300045051 Ga0451576_0001431 Ga0451576_0001431_19130_19774 211
230 3300050493 nmdc:mga0k408_2645_c1 nmdc:mga0k408_2645_c1_1394_2050 211
231 3300050514 nmdc:mga08x19_271186_c1 nmdc:mga08x19_271186_c1_259_903 211
232 3300053096 Ga0500641_0167054 Ga0500641_0167054_28_705 211
233 3300053730 Ga0500645_004900 Ga0500645_004900_2123_2800 211
234 3300053730 Ga0500645_032670 Ga0500645_032670_360_1037 211
235 iso_pu_bacteria 2511231002 2511246246 211

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03006

HlyIII

Haemolysin-III related

44

245

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
8oyx-assembly1.cif.gz_A de novo designed soluble gpcr-like fold glf_18 0.7649 10 211
8oyy-assembly2.cif.gz_B de novo designed soluble gpcr-like fold glf_32 0.7544 10 210
8oyx-assembly1.cif.gz_A de novo designed soluble gpcr-like fold glf_18 0.7343 10 211
8oyy-assembly2.cif.gz_B de novo designed soluble gpcr-like fold glf_32 0.7218 10 210
8oyx-assembly2.cif.gz_B de novo designed soluble gpcr-like fold glf_18 0.7061 10 211
ID Description Score Start End Superfamily
af_P67153_11_209_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.9709 7 202 1.20.1070.10
af_Q2FW82_22_220_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.9588 7 202 1.20.1070.10
af_P67153_11_209_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.9518 7 202 1.20.1070.10
af_Q2FW82_22_220_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.9401 7 202 1.20.1070.10
af_P9WFN7_30_234_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.9372 14 202 1.20.1070.10
ID Description Score Start End GO Terms
AF-A0A1H2ZAW3-F1-model_v4 Hemolysin III 0.9955 3 206 GO:0005886
GO:0046872
GO:0140911
AF-A0A2U0YHX4-F1-model_v4 deleted 0.994 1 211
AF-A0A1V6EWQ9-F1-model_v4 Hemolysin-III related 0.9906 3 211 GO:0005886
GO:0046872
GO:0140911
AF-A0A7X1P122-F1-model_v4 Hemolysin III family protein 0.9905 45 211 GO:0016020
GO:0046872
AF-A0A7X1TXB0-F1-model_v4 Hemolysin III family protein 0.9902 21 211 GO:0005886
GO:0046872
GO:0140911

Feature Viewer

pLDDT pTM Quality
93.72 0.9 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map