F347636

General Info

Members Datasets Scaffolds Average Seq Length
234 175 468 461

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2984576629|2984579049
Length 494
Sequence FTSAATGDLVEPINGGAQLIGAGLAGIAVVVVLVAVVKLHPFLALVLGGFTVGGIASIGSDAQVDGVPYDLAHVVTVFSTGFGSTTASVGLLIALGAMFAKLLADSGGADQVVDTIVSRSSRRALPWAMAGVGALIGLPMFFEIGLVLLMPVIYLVARRAELSLVAIGIPTLAGLSAMHALVPPHPGPLLAIDNLGADLGITLGLGVLFAIPVVIVAGPLFGILAARWVPVPAPAAVGAPAGPGTQDDDGPGSEGPGGTGAGTAAEGAPAGARRPGFAVTVATVLLPVLLMMGKAISDIALSEDNPAYRVLDLLGTPFVALLIAVLVAMWTFGLGLGWNLKQVGRSVESSLPGVAGILLIVAAGGGFKEVLVSTGVGTLLAEWAQDANVSVMLLAWVLAVLIRLATGSATIATVTASSLMAGLVDGLSAGEVSLMVLAIGAGSVFFSHLNDAGFWLVKEYFRLDVPQTIKTWSAMETVLSVTGLVLVLAADLVI

Samples

Sample ID Description Type Environment
1 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
2 3300001977 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
5 3300002244 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
20 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
24 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
25 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
26 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
27 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
28 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
29 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
30 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
31 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
32 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
33 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
34 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
35 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
38 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
46 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
47 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
48 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
49 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
74 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
75 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
76 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
77 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
78 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
79 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
80 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
81 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
82 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
83 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
84 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
85 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
86 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
87 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
88 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
89 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
90 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
91 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
92 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
93 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
94 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
95 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
96 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
97 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
98 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
99 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
100 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
101 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
102 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
103 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
104 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
105 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
106 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
107 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
108 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
109 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
110 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
111 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
112 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
113 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
114 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
115 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
116 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
117 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
118 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
119 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
127 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
128 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
129 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
130 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
131 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
132 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
133 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
134 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
135 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
136 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
137 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
138 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
139 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
140 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
141 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
142 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
143 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
144 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
145 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
146 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
147 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
148 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
149 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
150 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
151 2523231044 Gordonia rhizosphera NBRC 16068 Isolate Rhizosphere
152 2643221561 Nocardioides sp. Root151 Isolate Unclassified
153 2643221567 Phycicoccus sp. Root563 Isolate Unclassified
154 2643221615 Nocardioides sp. Root224 Isolate Unclassified
155 2643221624 Phycicoccus sp. Root101 Isolate Unclassified
156 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
157 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
158 2643221696 Nocardioides sp. Root140 Isolate Unclassified
159 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
160 2738541274 Mycobacterium sp. YR708 Isolate Unclassified
161 2738543028 Mycobacterium sp. YR782 Isolate Unclassified
162 2739367898 Nocardioides sp. CF479 Isolate Unclassified
163 2744054611 Aldersonia kunmingensis DSM 45001 Isolate Rhizosphere
164 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
165 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
166 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
167 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
168 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
169 2873314349 Sphaerisporangium siamense DSM 45784 Isolate Rhizosphere
170 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
171 2902799365 Mycolicibacterium sp. P1-5 Isolate Unclassified
172 2939582691 Mycolicibacterium sp. 624 Isolate Rhizosphere
173 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
174 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
175 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 88.89
Metatranscriptomes 0
Isolates 11.11

Biome Distribution

Category Percentage (%)
Aerial Root 0.85
Bulb 0
Endosphere 18.8
Nodule 0
Rhizoplane 10.26
Rhizosphere 58.55
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 LJQas_1003012 3300000549 Bacteria 2285
2 JGI24746J21847_1001784 3300001977 Bacteria 3445
3 JGI24737J22298_10019861 3300001990 Bacteria 2148
4 JGI24738J21930_10008339 3300002075 Bacteria 2360
5 JGI24742J22300_10002918 3300002244 Bacteria 2761
6 Ga0070670_100061217 3300005331 Bacteria 3232
7 Ga0070682_100008607 3300005337 Bacteria 5761
8 Ga0070682_100134781 3300005337 Bacteria 1676
9 Ga0068868_100154135 3300005338 Bacteria 1894
10 Ga0070689_100001849 3300005340 Bacteria 13631
11 Ga0070692_10099558 3300005345 Bacteria 1592
12 Ga0070668_100039932 3300005347 Bacteria 3590
13 Ga0070675_100053279 3300005354 Bacteria 3327
14 Ga0070675_100101159 3300005354 Bacteria 2428
15 Ga0070671_100015341 3300005355 Bacteria 6188
16 Ga0070671_100121173 3300005355 Bacteria 2201
17 Ga0070667_100031365 3300005367 Bacteria 4432
18 Ga0070667_100077846 3300005367 Bacteria 2832
19 Ga0070710_10021232 3300005437 Bacteria 3380
20 Ga0070700_100008233 3300005441 Bacteria 5675
21 Ga0070678_100084370 3300005456 Bacteria 2417
22 Ga0068867_100009251 3300005459 Bacteria 6952
23 Ga0070685_10045383 3300005466 Bacteria 2520
24 Ga0070693_100030349 3300005547 Bacteria 2955
25 Ga0070665_100001292 3300005548 Bacteria 29954
26 Ga0068852_100169231 3300005616 Bacteria 2047
27 Ga0068863_100001222 3300005841 Bacteria 25629
28 Ga0068860_100000266 3300005843 Bacteria 76520
29 Ga0081455_10082773 3300005937 Bacteria 2624
30 Ga0081539_10000085 3300005985 Bacteria 217816
31 Ga0075365_10008591 3300006038 Bacteria 5814
32 Ga0075365_10033531 3300006038 Bacteria 3310
33 Ga0075365_10035422 3300006038 Bacteria 3229
34 Ga0075365_10051992 3300006038 Bacteria 2708
35 Ga0075368_10003685 3300006042 Bacteria 5144
36 Ga0075368_10015061 3300006042 Bacteria 2862
37 Ga0075363_100002802 3300006048 Bacteria 7235
38 Ga0075363_100008443 3300006048 Bacteria 4795
39 Ga0075363_100010208 3300006048 Bacteria 4445
40 Ga0075364_10001680 3300006051 Bacteria 12142
41 Ga0075364_10003144 3300006051 Bacteria 9341
42 Ga0075364_10012416 3300006051 Bacteria 5209
43 Ga0075364_10056660 3300006051 Bacteria 2566
44 Ga0070712_100013544 3300006175 Bacteria 5213
45 Ga0075362_10003845 3300006177 Bacteria 5328
46 Ga0075367_10042734 3300006178 Bacteria 2653
47 Ga0075367_10054882 3300006178 Bacteria 2363
48 Ga0075369_10001169 3300006186 Bacteria 8870
49 Ga0075369_10002012 3300006186 Bacteria 7159
50 Ga0075369_10028086 3300006186 Bacteria 2356
51 Ga0075370_10032870 3300006353 Bacteria 2902
52 Ga0075428_100024833 3300006844 Bacteria 6629
53 Ga0075431_100114646 3300006847 Bacteria 2782
54 Ga0105244_10055912 3300009036 Bacteria 1999
55 Ga0105240_10224567 3300009093 Bacteria 2186
56 Ga0105245_10038686 3300009098 Bacteria 4244
57 Ga0114129_10038903 3300009147 Bacteria 6704
58 Ga0105248_10009190 3300009177 Bacteria 10874
59 Ga0105238_10115450 3300009551 Bacteria 2664
60 Ga0105239_10134804 3300010375 Bacteria 2749
61 Ga0157371_10065508 3300013102 Bacteria 2573
62 Ga0163163_10033409 3300014325 Bacteria 4976
63 Ga0157379_10032834 3300014968 Bacteria 4628
64 Ga0207426_1002664 3300025302 Bacteria 10967
65 Ga0207692_10005082 3300025898 Bacteria 5244
66 Ga0207642_10036610 3300025899 Bacteria 2107
67 Ga0207710_10012000 3300025900 Bacteria 3644
68 Ga0207647_10040482 3300025904 Bacteria 2934
69 Ga0207645_10022145 3300025907 Bacteria 4136
70 Ga0207660_10061088 3300025917 Bacteria 2711
71 Ga0207687_10095196 3300025927 Bacteria 2181
72 Ga0207644_10002062 3300025931 Bacteria 13009
73 Ga0207669_10011822 3300025937 Bacteria 4265
74 Ga0207704_10006658 3300025938 Bacteria 5408
75 Ga0207665_10010050 3300025939 Bacteria 6214
76 Ga0207665_10015734 3300025939 Bacteria 4964
77 Ga0207711_10195873 3300025941 Bacteria 1843
78 Ga0207712_10021123 3300025961 Bacteria 4271
79 Ga0207668_10008544 3300025972 Bacteria 6109
80 Ga0207668_10021770 3300025972 Bacteria 4092
81 Ga0207668_10066777 3300025972 Bacteria 2550
82 Ga0207640_10137767 3300025981 Bacteria 1774
83 Ga0207658_10022872 3300025986 Bacteria 4355
84 Ga0207658_10070681 3300025986 Bacteria 2641
85 Ga0207703_10038366 3300026035 Bacteria 3822
86 Ga0207678_10001309 3300026067 Bacteria 23057
87 Ga0207641_10002602 3300026088 Bacteria 16562
88 Ga0207648_10036422 3300026089 Bacteria 4334
89 Ga0207683_10245214 3300026121 Bacteria 1634
90 Ga0268266_10002747 3300028379 Bacteria 18386
91 Ga0268265_10170278 3300028380 Bacteria 1860
92 Ga0268264_10000302 3300028381 Bacteria 80450
93 Ga0307516_10000089 3300031730 Bacteria 101721
94 Ga0307413_10013887 3300031824 Bacteria 4071
95 Ga0307409_100000196 3300031995 Bacteria 23838
96 Ga0307409_100023870 3300031995 Bacteria 4249
97 Ga0307409_100116148 3300031995 Bacteria 2255
98 Ga0307409_100145051 3300031995 Bacteria 2051
99 Ga0307416_100065463 3300032002 Bacteria 2987
100 Ga0307415_100000214 3300032126 Bacteria 25412
101 Ga0307415_100018889 3300032126 Bacteria 4174
102 Ga0373931_0005047 3300035691 Bacteria 6071
103 Ga0395899_0218990 3300037312 Bacteria 1319
104 Ga0395900_0013036 3300037418 Bacteria 8496
105 Ga0395898_0006273 3300037466 Bacteria 12713
106 Ga0436364_0310321 3300037853 Bacteria 6557
107 Ga0395901_0092791 3300038443 Bacteria 3160
108 Ga0436365_0175115 3300039437 Bacteria 6256
109 Ga0436365_0535512 3300039437 Bacteria 4189
110 Ga0439461_0011033 3300041410 Bacteria 1670
111 Ga0439465_0004632 3300041413 Bacteria 4439
112 Ga0451853_2547055 3300041512 Bacteria 2006
113 Ga0439434_0015156 3300042435 Bacteria 2297
114 Ga0466972_0050509 3300044658 Bacteria 2007
115 Ga0466965_0021492 3300044683 Bacteria 3107
116 Ga0466965_0035525 3300044683 Bacteria 2441
117 Ga0466966_0001902 3300044684 Bacteria 13557
118 Ga0466961_0021781 3300044693 Bacteria 4123
119 Ga0466961_0086113 3300044693 Bacteria 1986
120 Ga0466963_0091847 3300044694 Bacteria 2068
121 Ga0466970_0005082 3300044765 Bacteria 6503
122 Ga0466970_0024596 3300044765 Bacteria 3150
123 Ga0466957_0038380 3300044842 Bacteria 2886
124 Ga0466960_0000180 3300044901 Bacteria 21705
125 Ga0466960_0000939 3300044901 Bacteria 10304
126 Ga0466960_0021178 3300044901 Bacteria 2891
127 Ga0466960_0039943 3300044901 Bacteria 2216
128 Ga0466958_0005835 3300045836 Bacteria 6664
129 Ga0466958_0074502 3300045836 Bacteria 2080
130 Ga0466967_0005438 3300045976 Bacteria 8831
131 Ga0466967_0009524 3300045976 Bacteria 7214
132 Ga0466967_0043698 3300045976 Bacteria 3881
133 Ga0466967_0145010 3300045976 Bacteria 2214
134 Ga0495638_0007913 3300046460 Bacteria 7580
135 Ga0495638_0067697 3300046460 Bacteria 2191
136 Ga0495658_0050750 3300046683 Bacteria 2348
137 Ga0495624_0064630 3300046690 Bacteria 2287
138 Ga0495593_0026847 3300047673 Bacteria 3175
139 Ga0496101_0008158 3300048904 Bacteria 6837
140 Ga0496102_0008213 3300048905 Bacteria 8935
141 Ga0496102_0061673 3300048905 Bacteria 3432
142 Ga0496102_0160861 3300048905 Bacteria 2112
143 Ga0496103_0074008 3300048906 Bacteria 2135
144 Ga0496104_0012378 3300048907 Bacteria 7671
145 Ga0496105_0065380 3300048908 Bacteria 3002
146 Ga0496105_0087554 3300048908 Bacteria 2573
147 Ga0496106_0070509 3300048909 Bacteria 2669
148 Ga0496107_0030658 3300048910 Bacteria 3833
149 Ga0496109_0029279 3300048912 Bacteria 4932
150 Ga0496109_0127077 3300048912 Bacteria 2377
151 Ga0496111_0035383 3300048914 Bacteria 3569
152 Ga0496111_0102433 3300048914 Bacteria 2105
153 Ga0496112_0012503 3300048915 Bacteria 7800
154 Ga0496112_0031598 3300048915 Bacteria 5137
155 Ga0496112_0053353 3300048915 Bacteria 3970
156 Ga0496112_0065575 3300048915 Bacteria 3584
157 Ga0496113_0015844 3300048916 Bacteria 5195
158 Ga0496113_0130267 3300048916 Bacteria 1973
159 Ga0496114_0006284 3300048917 Bacteria 9351
160 Ga0496114_0025970 3300048917 Bacteria 4792
161 Ga0496114_0032799 3300048917 Bacteria 4277
162 Ga0496115_0010856 3300048918 Bacteria 6816
163 Ga0496123_0005919 3300048926 Bacteria 12045
164 Ga0496125_0103846 3300048928 Bacteria 2084
165 Ga0496126_0028508 3300048929 Bacteria 5318
166 Ga0501032_0002451 3300049569 Bacteria 14491
167 Ga0501034_0003066 3300049571 Bacteria 19275
168 Ga0501037_0000060 3300049573 Bacteria 100831
169 Ga0501038_0000609 3300049574 Bacteria 31820
170 Ga0501039_0001134 3300049575 Bacteria 19626
171 Ga0501043_0001162 3300049579 Bacteria 23123
172 Ga0501047_0104529 3300049581 Bacteria 2712
173 Ga0501067_0024605 3300049583 Bacteria 3339
174 Ga0501067_0048961 3300049583 Bacteria 2343
175 Ga0501069_0072440 3300049585 Bacteria 1932
176 Ga0501070_0005600 3300049586 Bacteria 10712
177 Ga0501073_0065232 3300049589 Bacteria 2539
178 Ga0501080_0087421 3300049742 Bacteria 2896
179 Ga0501083_0006945 3300049744 Bacteria 8034
180 Ga0501044_0013436 3300049823 Bacteria 8853
181 nmdc:mga03683_1578_c1 3300050489 Bacteria 6806
182 nmdc:mga03683_15846_c1 3300050489 Bacteria 2821
183 nmdc:mga03n38_703_c1 3300050490 Bacteria 8770
184 nmdc:mga03n38_7534_c1 3300050490 Bacteria 3856
185 nmdc:mga00v17_1446_c1 3300050491 Bacteria 12426
186 nmdc:mga00v17_145829_c1 3300050491 Bacteria 1519
187 nmdc:mga00v17_18338_c2 3300050491 Bacteria 2155
188 nmdc:mga00v17_61965_c1 3300050491 Bacteria 2300
189 nmdc:mga0yw44_16356_c1 3300050492 Bacteria 4004
190 nmdc:mga0yw44_2481_c1 3300050492 Bacteria 7887
191 nmdc:mga0yw44_51933_c1 3300050492 Bacteria 2484
192 nmdc:mga0yw44_5566_c1 3300050492 Bacteria 5977
193 nmdc:mga0yw44_88313_c1 3300050492 Bacteria 1955
194 nmdc:mga07m45_36743_c1 3300050496 Bacteria 2729
195 nmdc:mga05p37_19007_c1 3300050507 Bacteria 8309
196 nmdc:mga06r32_100248_c1 3300050510 Bacteria 2841
197 nmdc:mga0sz30_2632_c1 3300050516 Bacteria 6391
198 Ga0500635_0018373 3300053080 Bacteria 2109
199 Ga0500644_0001053 3300053088 Bacteria 8197
200 Ga0500556_0002578 3300053104 Bacteria 5718
201 Ga0500556_0002968 3300053104 Bacteria 5124
202 Ga0500652_000472 3300053131 Bacteria 14245
203 Ga0500652_022518 3300053131 Bacteria 2385
204 Ga0500573_0089991 3300053140 Bacteria 1735
205 Ga0500645_000035 3300053730 Bacteria 113679
206 Ga0501084_0011231 3300054114 Bacteria 7415
207 Ga0466962_0008625 3300061719 Bacteria 4887
208 Ga0530510_0140872 3300061734 Bacteria 1777
209 2984579049 2984576629 Bacteria 4248407
210 2523385062 2523231044 Bacteria 6434991
211 2643827623 2643221561 Bacteria 4984412
212 2643853094 2643221567 Bacteria 4163945
213 2644091503 2643221615 Bacteria 5487866
214 2644135583 2643221624 Bacteria 4384879
215 2644321306 2643221657 Bacteria 5490246
216 2644527580 2643221694 Bacteria 4392972
217 2644534875 2643221696 Bacteria 5431823
218 2644667346 2643221722 Bacteria 4247614
219 2738704095 2738541274 Bacteria 6909446
220 2739334467 2738543028 Bacteria 6917070
221 2740168606 2739367898 Bacteria 4367674
222 2744954708 2744054611 Bacteria 5611514
223 2774392791 2773857762 Bacteria 5971770
224 2809196615 2808606439 Bacteria 5952208
225 2812351249 2811994878 Bacteria 5992952
226 2857482986 2857481737 Bacteria 4761446
227 2862180486 2862178590 Bacteria 8583590
228 2873319936 2873314349 Bacteria 8512634
229 2891971132 2891968417 Bacteria 5821697
230 2902800938 2902799365 Bacteria 5419524
231 2939585791 2939582691 Bacteria 7088898
232 2990089829 2990088156 Bacteria 6657676
233 2990260057 2990256926 Bacteria 4252839
234 8055066177 8055066027 Bacteria 9479577
235 LJQas_1003012
236 JGI24746J21847_1001784
237 JGI24737J22298_10019861
238 JGI24738J21930_10008339
239 JGI24742J22300_10002918
240 Ga0070670_100061217
241 Ga0070682_100008607
242 Ga0070682_100134781
243 Ga0068868_100154135
244 Ga0070689_100001849
245 Ga0070692_10099558
246 Ga0070668_100039932
247 Ga0070675_100053279
248 Ga0070675_100101159
249 Ga0070671_100015341
250 Ga0070671_100121173
251 Ga0070667_100031365
252 Ga0070667_100077846
253 Ga0070710_10021232
254 Ga0070700_100008233
255 Ga0070678_100084370
256 Ga0068867_100009251
257 Ga0070685_10045383
258 Ga0070693_100030349
259 Ga0070665_100001292
260 Ga0068852_100169231
261 Ga0068863_100001222
262 Ga0068860_100000266
263 Ga0081455_10082773
264 Ga0081539_10000085
265 Ga0075365_10008591
266 Ga0075365_10033531
267 Ga0075365_10035422
268 Ga0075365_10051992
269 Ga0075368_10003685
270 Ga0075368_10015061
271 Ga0075363_100002802
272 Ga0075363_100008443
273 Ga0075363_100010208
274 Ga0075364_10001680
275 Ga0075364_10003144
276 Ga0075364_10012416
277 Ga0075364_10056660
278 Ga0070712_100013544
279 Ga0075362_10003845
280 Ga0075367_10042734
281 Ga0075367_10054882
282 Ga0075369_10001169
283 Ga0075369_10002012
284 Ga0075369_10028086
285 Ga0075370_10032870
286 Ga0075428_100024833
287 Ga0075431_100114646
288 Ga0105244_10055912
289 Ga0105240_10224567
290 Ga0105245_10038686
291 Ga0114129_10038903
292 Ga0105248_10009190
293 Ga0105238_10115450
294 Ga0105239_10134804
295 Ga0157371_10065508
296 Ga0163163_10033409
297 Ga0157379_10032834
298 Ga0207426_1002664
299 Ga0207692_10005082
300 Ga0207642_10036610
301 Ga0207710_10012000
302 Ga0207647_10040482
303 Ga0207645_10022145
304 Ga0207660_10061088
305 Ga0207687_10095196
306 Ga0207644_10002062
307 Ga0207669_10011822
308 Ga0207704_10006658
309 Ga0207665_10010050
310 Ga0207665_10015734
311 Ga0207711_10195873
312 Ga0207712_10021123
313 Ga0207668_10008544
314 Ga0207668_10021770
315 Ga0207668_10066777
316 Ga0207640_10137767
317 Ga0207658_10022872
318 Ga0207658_10070681
319 Ga0207703_10038366
320 Ga0207678_10001309
321 Ga0207641_10002602
322 Ga0207648_10036422
323 Ga0207683_10245214
324 Ga0268266_10002747
325 Ga0268265_10170278
326 Ga0268264_10000302
327 Ga0307516_10000089
328 Ga0307413_10013887
329 Ga0307409_100000196
330 Ga0307409_100023870
331 Ga0307409_100116148
332 Ga0307409_100145051
333 Ga0307416_100065463
334 Ga0307415_100000214
335 Ga0307415_100018889
336 Ga0373931_0005047
337 Ga0395899_0218990
338 Ga0395900_0013036
339 Ga0395898_0006273
340 Ga0436364_0310321
341 Ga0395901_0092791
342 Ga0436365_0175115
343 Ga0436365_0535512
344 Ga0439461_0011033
345 Ga0439465_0004632
346 Ga0451853_2547055
347 Ga0439434_0015156
348 Ga0466972_0050509
349 Ga0466965_0021492
350 Ga0466965_0035525
351 Ga0466966_0001902
352 Ga0466961_0021781
353 Ga0466961_0086113
354 Ga0466963_0091847
355 Ga0466970_0005082
356 Ga0466970_0024596
357 Ga0466957_0038380
358 Ga0466960_0000180
359 Ga0466960_0000939
360 Ga0466960_0021178
361 Ga0466960_0039943
362 Ga0466958_0005835
363 Ga0466958_0074502
364 Ga0466967_0005438
365 Ga0466967_0009524
366 Ga0466967_0043698
367 Ga0466967_0145010
368 Ga0495638_0007913
369 Ga0495638_0067697
370 Ga0495658_0050750
371 Ga0495624_0064630
372 Ga0495593_0026847
373 Ga0496101_0008158
374 Ga0496102_0008213
375 Ga0496102_0061673
376 Ga0496102_0160861
377 Ga0496103_0074008
378 Ga0496104_0012378
379 Ga0496105_0065380
380 Ga0496105_0087554
381 Ga0496106_0070509
382 Ga0496107_0030658
383 Ga0496109_0029279
384 Ga0496109_0127077
385 Ga0496111_0035383
386 Ga0496111_0102433
387 Ga0496112_0012503
388 Ga0496112_0031598
389 Ga0496112_0053353
390 Ga0496112_0065575
391 Ga0496113_0015844
392 Ga0496113_0130267
393 Ga0496114_0006284
394 Ga0496114_0025970
395 Ga0496114_0032799
396 Ga0496115_0010856
397 Ga0496123_0005919
398 Ga0496125_0103846
399 Ga0496126_0028508
400 Ga0501032_0002451
401 Ga0501034_0003066
402 Ga0501037_0000060
403 Ga0501038_0000609
404 Ga0501039_0001134
405 Ga0501043_0001162
406 Ga0501047_0104529
407 Ga0501067_0024605
408 Ga0501067_0048961
409 Ga0501069_0072440
410 Ga0501070_0005600
411 Ga0501073_0065232
412 Ga0501080_0087421
413 Ga0501083_0006945
414 Ga0501044_0013436
415 nmdc:mga03683_1578_c1
416 nmdc:mga03683_15846_c1
417 nmdc:mga03n38_703_c1
418 nmdc:mga03n38_7534_c1
419 nmdc:mga00v17_1446_c1
420 nmdc:mga00v17_145829_c1
421 nmdc:mga00v17_18338_c2
422 nmdc:mga00v17_61965_c1
423 nmdc:mga0yw44_16356_c1
424 nmdc:mga0yw44_2481_c1
425 nmdc:mga0yw44_51933_c1
426 nmdc:mga0yw44_5566_c1
427 nmdc:mga0yw44_88313_c1
428 nmdc:mga07m45_36743_c1
429 nmdc:mga05p37_19007_c1
430 nmdc:mga06r32_100248_c1
431 nmdc:mga0sz30_2632_c1
432 Ga0500635_0018373
433 Ga0500644_0001053
434 Ga0500556_0002578
435 Ga0500556_0002968
436 Ga0500652_000472
437 Ga0500652_022518
438 Ga0500573_0089991
439 Ga0500645_000035
440 Ga0501084_0011231
441 Ga0466962_0008625
442 Ga0530510_0140872
443 2984579049
444 2523385062
445 2643827623
446 2643853094
447 2644091503
448 2644135583
449 2644321306
450 2644527580
451 2644534875
452 2644667346
453 2738704095
454 2739334467
455 2740168606
456 2744954708
457 2774392791
458 2809196615
459 2812351249
460 2857482986
461 2862180486
462 2873319936
463 2891971132
464 2902800938
465 2939585791
466 2990089829
467 2990260057
468 8055066177

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02447

GntP_permease

GntP family permease

261

493

0.98

PF02447

GntP_permease

GntP family permease

18

252

0.9

PF03600

CitMHS

Citrate transporter

17

442

0.7

Structural Annotation

Top 5 Hits

ID Description Score Start End
4r1i-assembly1.cif.gz_B structure and function of neisseria gonorrhoeae mtrf illuminates a class of antimetabolite efflux pumps 0.4587 28 338
7qha-assembly1.cif.gz_B cryo-em structure of the tripartite atp-independent periplasmic (trap) transporter siaqm from photobacterium profundum in amphipol 0.4551 30 340
4r0c-assembly1.cif.gz_D crystal structure of the alcanivorax borkumensis ydah transporter reveals an unusual topology 0.4549 28 338
4f35-assembly2.cif.gz_A crystal structure of a bacterial dicarboxylate/sodium symporter 0.4356 24 328
6ol0-assembly2.cif.gz_B structure of vcindy bound to malate 0.4214 24 340
ID Description Score Start End Superfamily
af_I6YCG9_3_406_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.5742 27 338 1.20.1530.20
4up6A00 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.5183 252 307 1.10.287.3610
af_I6YCG9_3_406_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.4432 27 338 1.20.1530.20
af_A4HVP9_281_498_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4206 250 340 1.20.1250.20
af_Q0JGZ0_269_434_1.20.120.1770 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A); 0.3281 166 337 1.20.120.1770
ID Description Score Start End GO Terms
AF-N0E0M9-F1-model_v4 Gluconate permease 0.9497 250 339 GO:0005886
GO:0015128
AF-A0A6B3F3G4-F1-model_v4 Gluconate transporter 0.8932 127 231 GO:0005886
GO:0015128
AF-A0A0B0HP95-F1-model_v4 deleted 0.8815 120 230
AF-A0A6B3F3G4-F1-model_v4 Gluconate transporter 0.878 127 231 GO:0005886
GO:0015128
AF-A0A1I3NY38-F1-model_v4 Gluconate transporter 0.8639 224 342 GO:0005886
GO:0015128

Map