F347565

General Info

Members Datasets Scaffolds Average Seq Length
234 181 468 489

Family's Representative Sequence

Representative Sequence 3300053078|Ga0495612_0004860|Ga0495612_0004860_545_2281
Length 578
Sequence MSETQALDDFDTYYRAVTSRDSRFDGRFFTGVTTTGIYCRPICPARTPKPENVRFFRVAAAAEAAGFRTCRRCRPDKVPGSPDWNIRADLAGRALRLIADGACDHEDGVGSLATALAVSERHLHRTLVAELGVGPLTLARSRRAQTARLLLESTALPVSDVAFAAGYGSIRQFNDSVREAFGATPSEIRARFGTGVAVSELAGSAVEGDGALTLRLTYRPPLDIANLWRWLGARSIPGVDELVTDPVASHLVPSPHGRSRATGPEHSTGMVYRRALRLPHGTGVVELRDDGGSAVHARLAVDDLRDVAVAVRRCRDLLDLDADPAQVGVVLSADPALAPLAAARPGMRVPGCVDGFEIAVRAILGQQVSVAAARTLAGRVVERFRAVEPAAEAGLDPAAGAANPSRFVDKARAHGGGDGSRLDGARDSDPSAIPVTGTPGNDLSPFPAAKTLAEGDFDGLGITGSRIASIRALATAVAKGEISLDRGVDRTETRARLLALPGIGPWTADYIALRAFGDPDAFPVGDLILRRQAVALGLPEKERELTEHAERWRPWRAYASLHLWASASDENSQNGAQQ

Samples

Sample ID Description Type Environment
1 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
2 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
33 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
34 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
35 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
36 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
37 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
38 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
41 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
43 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
46 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
47 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
48 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
51 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
52 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
53 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
60 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
61 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
62 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
92 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
94 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
95 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
96 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
97 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
98 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
99 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
100 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
101 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
102 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
103 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
104 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
105 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
106 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
107 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
108 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
109 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
110 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
111 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
112 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
113 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
114 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
115 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
116 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
117 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
118 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
119 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
120 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
121 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
122 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
123 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
124 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
125 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
126 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
127 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
128 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
129 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
130 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
131 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
132 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
133 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
134 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
135 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
136 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
141 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
142 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
143 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
144 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
146 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
147 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
148 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
149 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
150 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
151 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
152 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
153 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
154 2582580736 Prauserella sp. Am3 Isolate Unclassified
155 2643221549 Agromyces sp. Root1464 Isolate Unclassified
156 2643221604 Nocardioides sp. Root190 Isolate Unclassified
157 2643221615 Nocardioides sp. Root224 Isolate Unclassified
158 2643221617 Nocardioides sp. Root79 Isolate Unclassified
159 2643221619 Agromyces sp. Root81 Isolate Unclassified
160 2643221620 Nocardioides sp. Root240 Isolate Unclassified
161 2643221641 Nocardioides sp. Root122 Isolate Unclassified
162 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
163 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
164 2738541305 Nocardioides sp. CF167 Isolate Unclassified
165 2739367898 Nocardioides sp. CF479 Isolate Unclassified
166 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
167 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
168 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
169 2808606372 Agromyces sp. 23-23 Isolate Unclassified
170 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
171 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
172 2848551377 Brachybacterium saurashtrense DSM 23186 Isolate Unclassified
173 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
174 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
175 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
176 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
177 2919395869 Microbacterium resistens 2980 Isolate Unclassified
178 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
179 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
180 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
181 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 87.61
Metatranscriptomes 0.43
Isolates 11.97

Biome Distribution

Category Percentage (%)
Aerial Root 0.85
Bulb 0
Endosphere 6.41
Nodule 0.43
Rhizoplane 11.54
Rhizosphere 70.51
Stem 0
Stem Tuber 0.43
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495612_0004860 3300053078 Bacteria 5565
2 Ga0055531_10019407 3300003794 Bacteria 2750
3 Ga0070658_10001815 3300005327 Bacteria 17964
4 Ga0070658_10024863 3300005327 Bacteria 4803
5 Ga0070658_10078331 3300005327 Bacteria 2712
6 Ga0070658_10190805 3300005327 Bacteria 1727
7 Ga0070683_100036474 3300005329 Bacteria 4499
8 Ga0070683_100153788 3300005329 Bacteria 2181
9 Ga0068869_100021863 3300005334 Bacteria 4402
10 Ga0070680_100046635 3300005336 Bacteria 3526
11 Ga0068868_100009431 3300005338 Bacteria 7023
12 Ga0070660_100090872 3300005339 Bacteria 2407
13 Ga0070687_100110652 3300005343 Bacteria 1554
14 Ga0070668_100047766 3300005347 Bacteria 3291
15 Ga0070669_100130960 3300005353 Bacteria 1924
16 Ga0070675_100001282 3300005354 Bacteria 18359
17 Ga0070671_100115618 3300005355 Bacteria 2255
18 Ga0070700_100036545 3300005441 Bacteria 2980
19 Ga0070663_100000292 3300005455 Bacteria 25592
20 Ga0070663_100015296 3300005455 Bacteria 4949
21 Ga0070662_100028083 3300005457 Bacteria 3913
22 Ga0070662_100064337 3300005457 Bacteria 2686
23 Ga0070681_10024848 3300005458 Bacteria 6028
24 Ga0070707_100154379 3300005468 Bacteria 2236
25 Ga0070679_100000353 3300005530 Bacteria 39134
26 Ga0070679_100003553 3300005530 Bacteria 14280
27 Ga0070679_100058373 3300005530 Bacteria 3845
28 Ga0070684_100163165 3300005535 Bacteria 2022
29 Ga0070665_100084726 3300005548 Bacteria 3175
30 Ga0070665_100102620 3300005548 Bacteria 2863
31 Ga0070704_100018761 3300005549 Bacteria 4431
32 Ga0068855_100007412 3300005563 Bacteria 13282
33 Ga0068855_100218126 3300005563 Bacteria 2141
34 Ga0070664_100006771 3300005564 Bacteria 9240
35 Ga0070664_100069093 3300005564 Bacteria 3022
36 Ga0068857_100049475 3300005577 Bacteria 3729
37 Ga0068857_100103643 3300005577 Bacteria 2554
38 Ga0068856_100201546 3300005614 Bacteria 2004
39 Ga0070702_100058685 3300005615 Bacteria 2230
40 Ga0068852_100047626 3300005616 Bacteria 3657
41 Ga0068859_100009428 3300005617 Bacteria 9863
42 Ga0068858_100088285 3300005842 Bacteria 2885
43 Ga0068860_100000520 3300005843 Bacteria 47181
44 Ga0068860_100251766 3300005843 Bacteria 1720
45 Ga0081455_10000390 3300005937 Bacteria 58031
46 Ga0081539_10025725 3300005985 Bacteria 3777
47 Ga0075365_10009364 3300006038 Bacteria 5625
48 Ga0075365_10026275 3300006038 Bacteria 3694
49 Ga0075365_10034107 3300006038 Bacteria 3285
50 Ga0075364_10018326 3300006051 Bacteria 4381
51 Ga0075367_10008186 3300006178 Bacteria 5402
52 Ga0075370_10026677 3300006353 Bacteria 3201
53 Ga0068871_100028185 3300006358 Bacteria 4401
54 Ga0097620_100009428 3300006931 Bacteria 9863
55 Ga0105244_10036874 3300009036 Bacteria 2558
56 Ga0111539_10036363 3300009094 Bacteria 5955
57 Ga0111539_10099827 3300009094 Bacteria 3408
58 Ga0105245_10005593 3300009098 Bacteria 11040
59 Ga0105247_10007250 3300009101 Bacteria 6809
60 Ga0114129_10056180 3300009147 Bacteria 5515
61 Ga0105243_10033303 3300009148 Bacteria 3985
62 Ga0105241_10008785 3300009174 Bacteria 7424
63 Ga0105237_10036155 3300009545 Bacteria 4997
64 Ga0105238_10025245 3300009551 Bacteria 6057
65 Ga0105249_10042372 3300009553 Bacteria 4139
66 Ga0105246_10009472 3300011119 Bacteria 6000
67 Ga0105246_10014677 3300011119 Bacteria 4930
68 Ga0157371_10086883 3300013102 Bacteria 2215
69 Ga0157369_10019596 3300013105 Bacteria 7570
70 Ga0157369_10218018 3300013105 Bacteria 1998
71 Ga0171462_1001 3300013250 Bacteria 1135406
72 Ga0157378_10069594 3300013297 Bacteria 3157
73 Ga0163162_10119476 3300013306 Bacteria 2739
74 Ga0157375_10014452 3300013308 Bacteria 7042
75 Ga0157375_10123394 3300013308 Bacteria 2703
76 Ga0163163_10025895 3300014325 Bacteria 5597
77 Ga0157380_10078018 3300014326 Bacteria 2701
78 Ga0157377_10010893 3300014745 Bacteria 4518
79 Ga0157376_10037475 3300014969 Bacteria 3936
80 Ga0224712_10010541 3300022467 Bacteria 2831
81 Ga0207655_1015170 3300025728 Bacteria 4301
82 Ga0207643_10074090 3300025908 Bacteria 1963
83 Ga0207705_10002323 3300025909 Bacteria 14707
84 Ga0207705_10032452 3300025909 Bacteria 3732
85 Ga0207707_10085100 3300025912 Bacteria 2762
86 Ga0207695_10000679 3300025913 Bacteria 66777
87 Ga0207671_10000052 3300025914 Bacteria 188462
88 Ga0207693_10002732 3300025915 Bacteria 15275
89 Ga0207663_10057204 3300025916 Bacteria 2456
90 Ga0207660_10000132 3300025917 Bacteria 43947
91 Ga0207660_10095495 3300025917 Bacteria 2212
92 Ga0207660_10104199 3300025917 Bacteria 2124
93 Ga0207657_10007437 3300025919 Bacteria 11235
94 Ga0207657_10098787 3300025919 Bacteria 2425
95 Ga0207652_10000512 3300025921 Bacteria 39235
96 Ga0207652_10071518 3300025921 Bacteria 3014
97 Ga0207646_10187785 3300025922 Bacteria 1867
98 Ga0207694_10000079 3300025924 Bacteria 111767
99 Ga0207659_10198889 3300025926 Bacteria 1599
100 Ga0207690_10043963 3300025932 Bacteria 2942
101 Ga0207706_10012955 3300025933 Bacteria 7589
102 Ga0207706_10023126 3300025933 Bacteria 5582
103 Ga0207706_10108516 3300025933 Bacteria 2442
104 Ga0207709_10057331 3300025935 Bacteria 2415
105 Ga0207665_10000538 3300025939 Bacteria 25495
106 Ga0207689_10002432 3300025942 Bacteria 17338
107 Ga0207689_10035888 3300025942 Bacteria 4116
108 Ga0207661_10099642 3300025944 Bacteria 2437
109 Ga0207712_10039444 3300025961 Bacteria 3236
110 Ga0207668_10067102 3300025972 Bacteria 2546
111 Ga0207668_10196098 3300025972 Bacteria 1604
112 Ga0207658_10006292 3300025986 Bacteria 8109
113 Ga0207677_10005884 3300026023 Bacteria 6673
114 Ga0207677_10033433 3300026023 Bacteria 3318
115 Ga0207678_10023611 3300026067 Bacteria 5377
116 Ga0207708_10005415 3300026075 Bacteria 9404
117 Ga0207641_10160424 3300026088 Bacteria 2044
118 Ga0207683_10000893 3300026121 Bacteria 27409
119 Ga0207698_10086597 3300026142 Bacteria 2548
120 Ga0207428_10034251 3300027907 Bacteria 4164
121 Ga0268264_10000242 3300028381 Bacteria 103492
122 Ga0307513_10071351 3300031456 Bacteria 3625
123 Ga0307405_10032931 3300031731 Bacteria 3069
124 Ga0307406_10000236 3300031901 Bacteria 33679
125 Ga0307406_10112971 3300031901 Bacteria 1874
126 Ga0307409_100005249 3300031995 Bacteria 7424
127 Ga0307409_100074947 3300031995 Bacteria 2707
128 Ga0307409_100075548 3300031995 Bacteria 2698
129 Ga0307409_100186665 3300031995 Bacteria 1841
130 Ga0307409_100205191 3300031995 Bacteria 1767
131 Ga0307416_100081905 3300032002 Bacteria 2731
132 Ga0307415_100000490 3300032126 Bacteria 17127
133 Ga0373928_0014851 3300035084 Bacteria 1580
134 Ga0373929_0004150 3300035085 Bacteria 2599
135 Ga0439436_0004407 3300041404 Bacteria 4311
136 Ga0439465_0002705 3300041413 Bacteria 5794
137 Ga0439465_0015653 3300041413 Bacteria 2365
138 Ga0451793_1002562 3300041452 Bacteria 3014
139 Ga0439445_0001655 3300042004 Bacteria 4870
140 Ga0439449_0000054 3300042007 Bacteria 34695
141 Ga0466972_0038430 3300044658 Bacteria 2338
142 Ga0466961_0003911 3300044693 Bacteria 9316
143 Ga0466961_0006357 3300044693 Bacteria 7505
144 Ga0466963_0076556 3300044694 Bacteria 2259
145 Ga0466970_0031937 3300044765 Bacteria 2782
146 Ga0466970_0054511 3300044765 Bacteria 2135
147 Ga0466957_0026274 3300044842 Bacteria 3453
148 Ga0466960_0006670 3300044901 Bacteria 4643
149 Ga0466960_0010570 3300044901 Bacteria 3836
150 Ga0495651_0002757 3300046462 Bacteria 13624
151 Ga0495608_0101655 3300046511 Bacteria 1853
152 Ga0495616_0027102 3300046513 Bacteria 3043
153 Ga0495628_0019201 3300046516 Bacteria 5653
154 Ga0495630_0026737 3300046517 Bacteria 4275
155 Ga0495652_0002172 3300046529 Bacteria 20604
156 Ga0495600_0021711 3300046809 Bacteria 4116
157 Ga0495604_0008834 3300047317 Bacteria 7964
158 Ga0495602_0080526 3300048088 Bacteria 2743
159 Ga0496100_0243181 3300048903 Bacteria 1328
160 Ga0496101_0034943 3300048904 Bacteria 3553
161 Ga0496101_0058800 3300048904 Bacteria 2785
162 Ga0496102_0000264 3300048905 Bacteria 67050
163 Ga0496102_0046504 3300048905 Bacteria 3942
164 Ga0496102_0091907 3300048905 Bacteria 2810
165 Ga0496102_0121030 3300048905 Bacteria 2444
166 Ga0496103_0001057 3300048906 Bacteria 19207
167 Ga0496103_0012148 3300048906 Bacteria 5116
168 Ga0496104_0006188 3300048907 Bacteria 10512
169 Ga0496105_0029106 3300048908 Bacteria 4520
170 Ga0496105_0045315 3300048908 Bacteria 3628
171 Ga0496105_0068692 3300048908 Bacteria 2927
172 Ga0496107_0027412 3300048910 Bacteria 4045
173 Ga0496107_0096966 3300048910 Bacteria 2158
174 Ga0496108_0015346 3300048911 Bacteria 6248
175 Ga0496109_0061780 3300048912 Bacteria 3425
176 Ga0496110_0017770 3300048913 Bacteria 5951
177 Ga0496111_0041771 3300048914 Bacteria 3291
178 Ga0496112_0143347 3300048915 Bacteria 2358
179 Ga0496113_0036322 3300048916 Bacteria 3609
180 Ga0496113_0125374 3300048916 Bacteria 2010
181 Ga0496114_0018234 3300048917 Bacteria 5672
182 Ga0496114_0021450 3300048917 Bacteria 5257
183 Ga0496114_0059830 3300048917 Bacteria 3182
184 Ga0496115_0003759 3300048918 Bacteria 10911
185 Ga0501034_0001881 3300049571 Bacteria 26609
186 Ga0501036_0071520 3300049572 Bacteria 2933
187 Ga0501036_0108919 3300049572 Bacteria 2341
188 Ga0501039_0038257 3300049575 Bacteria 3706
189 Ga0501043_0031570 3300049579 Bacteria 4164
190 Ga0501068_0027947 3300049584 Bacteria 3333
191 Ga0501069_0079648 3300049585 Bacteria 1844
192 Ga0501073_0046295 3300049589 Bacteria 3060
193 Ga0501076_0087170 3300049592 Bacteria 2509
194 Ga0501035_0013894 3300049822 Bacteria 7428
195 Ga0501044_0016806 3300049823 Bacteria 7852
196 nmdc:mga00v17_21832_c1 3300050491 Bacteria 3686
197 nmdc:mga0yw44_119402_c1 3300050492 Bacteria 1697
198 nmdc:mga0yw44_2653_c1 3300050492 Bacteria 7702
199 nmdc:mga0yw44_31702_c1 3300050492 Bacteria 3076
200 nmdc:mga06z11_13182_c1 3300050494 Bacteria 3620
201 nmdc:mga06z11_51761_c1 3300050494 Bacteria 2104
202 nmdc:mga08y16_25143_c1 3300050511 Bacteria 6281
203 Ga0495595_0041865 3300053084 Bacteria 2098
204 Ga0500593_000080 3300053117 Bacteria 35767
205 Ga0500573_0007445 3300053140 Bacteria 5970
206 Ga0466962_0022157 3300061719 Bacteria 3051
207 2583149644 2582580736 Bacteria 5325865
208 2643769408 2643221549 Bacteria 4042819
209 2644034087 2643221604 Bacteria 5014917
210 2644089870 2643221615 Bacteria 5487866
211 2644102539 2643221617 Bacteria 5139111
212 2644114025 2643221619 Bacteria 4158469
213 2644118202 2643221620 Bacteria 5134593
214 2644231430 2643221641 Bacteria 4490190
215 2644319715 2643221657 Bacteria 5490246
216 2723642707 2721755702 Bacteria 4373124
217 2738871297 2738541305 Bacteria 4910150
218 2740166758 2739367898 Bacteria 4367674
219 2774393672 2773857762 Bacteria 5971770
220 2774400442 2773857763 Bacteria 4180068
221 2808628627 2808606306 Bacteria 3608896
222 2808902681 2808606372 Bacteria 4649509
223 2809195444 2808606439 Bacteria 5952208
224 2812350327 2811994878 Bacteria 5992952
225 2848551778 2848551377 Bacteria 3720646
226 2855387576 2855386786 Bacteria 4752232
227 2891972054 2891968417 Bacteria 5821697
228 2899363830 2899359706 Bacteria 10940472
229 2899370405 2899370129 Bacteria 6781179
230 2919398553 2919395869 Bacteria 3704152
231 2935413122 2935409751 Bacteria 4179611
232 2984577104 2984576629 Bacteria 4248407
233 2990258851 2990256926 Bacteria 4252839
234 8054612493 8054609563 Bacteria 5170090
235 Ga0495612_0004860
236 Ga0055531_10019407
237 Ga0070658_10001815
238 Ga0070658_10024863
239 Ga0070658_10078331
240 Ga0070658_10190805
241 Ga0070683_100036474
242 Ga0070683_100153788
243 Ga0068869_100021863
244 Ga0070680_100046635
245 Ga0068868_100009431
246 Ga0070660_100090872
247 Ga0070687_100110652
248 Ga0070668_100047766
249 Ga0070669_100130960
250 Ga0070675_100001282
251 Ga0070671_100115618
252 Ga0070700_100036545
253 Ga0070663_100000292
254 Ga0070663_100015296
255 Ga0070662_100028083
256 Ga0070662_100064337
257 Ga0070681_10024848
258 Ga0070707_100154379
259 Ga0070679_100000353
260 Ga0070679_100003553
261 Ga0070679_100058373
262 Ga0070684_100163165
263 Ga0070665_100084726
264 Ga0070665_100102620
265 Ga0070704_100018761
266 Ga0068855_100007412
267 Ga0068855_100218126
268 Ga0070664_100006771
269 Ga0070664_100069093
270 Ga0068857_100049475
271 Ga0068857_100103643
272 Ga0068856_100201546
273 Ga0070702_100058685
274 Ga0068852_100047626
275 Ga0068859_100009428
276 Ga0068858_100088285
277 Ga0068860_100000520
278 Ga0068860_100251766
279 Ga0081455_10000390
280 Ga0081539_10025725
281 Ga0075365_10009364
282 Ga0075365_10026275
283 Ga0075365_10034107
284 Ga0075364_10018326
285 Ga0075367_10008186
286 Ga0075370_10026677
287 Ga0068871_100028185
288 Ga0097620_100009428
289 Ga0105244_10036874
290 Ga0111539_10036363
291 Ga0111539_10099827
292 Ga0105245_10005593
293 Ga0105247_10007250
294 Ga0114129_10056180
295 Ga0105243_10033303
296 Ga0105241_10008785
297 Ga0105237_10036155
298 Ga0105238_10025245
299 Ga0105249_10042372
300 Ga0105246_10009472
301 Ga0105246_10014677
302 Ga0157371_10086883
303 Ga0157369_10019596
304 Ga0157369_10218018
305 Ga0171462_1001
306 Ga0157378_10069594
307 Ga0163162_10119476
308 Ga0157375_10014452
309 Ga0157375_10123394
310 Ga0163163_10025895
311 Ga0157380_10078018
312 Ga0157377_10010893
313 Ga0157376_10037475
314 Ga0224712_10010541
315 Ga0207655_1015170
316 Ga0207643_10074090
317 Ga0207705_10002323
318 Ga0207705_10032452
319 Ga0207707_10085100
320 Ga0207695_10000679
321 Ga0207671_10000052
322 Ga0207693_10002732
323 Ga0207663_10057204
324 Ga0207660_10000132
325 Ga0207660_10095495
326 Ga0207660_10104199
327 Ga0207657_10007437
328 Ga0207657_10098787
329 Ga0207652_10000512
330 Ga0207652_10071518
331 Ga0207646_10187785
332 Ga0207694_10000079
333 Ga0207659_10198889
334 Ga0207690_10043963
335 Ga0207706_10012955
336 Ga0207706_10023126
337 Ga0207706_10108516
338 Ga0207709_10057331
339 Ga0207665_10000538
340 Ga0207689_10002432
341 Ga0207689_10035888
342 Ga0207661_10099642
343 Ga0207712_10039444
344 Ga0207668_10067102
345 Ga0207668_10196098
346 Ga0207658_10006292
347 Ga0207677_10005884
348 Ga0207677_10033433
349 Ga0207678_10023611
350 Ga0207708_10005415
351 Ga0207641_10160424
352 Ga0207683_10000893
353 Ga0207698_10086597
354 Ga0207428_10034251
355 Ga0268264_10000242
356 Ga0307513_10071351
357 Ga0307405_10032931
358 Ga0307406_10000236
359 Ga0307406_10112971
360 Ga0307409_100005249
361 Ga0307409_100074947
362 Ga0307409_100075548
363 Ga0307409_100186665
364 Ga0307409_100205191
365 Ga0307416_100081905
366 Ga0307415_100000490
367 Ga0373928_0014851
368 Ga0373929_0004150
369 Ga0439436_0004407
370 Ga0439465_0002705
371 Ga0439465_0015653
372 Ga0451793_1002562
373 Ga0439445_0001655
374 Ga0439449_0000054
375 Ga0466972_0038430
376 Ga0466961_0003911
377 Ga0466961_0006357
378 Ga0466963_0076556
379 Ga0466970_0031937
380 Ga0466970_0054511
381 Ga0466957_0026274
382 Ga0466960_0006670
383 Ga0466960_0010570
384 Ga0495651_0002757
385 Ga0495608_0101655
386 Ga0495616_0027102
387 Ga0495628_0019201
388 Ga0495630_0026737
389 Ga0495652_0002172
390 Ga0495600_0021711
391 Ga0495604_0008834
392 Ga0495602_0080526
393 Ga0496100_0243181
394 Ga0496101_0034943
395 Ga0496101_0058800
396 Ga0496102_0000264
397 Ga0496102_0046504
398 Ga0496102_0091907
399 Ga0496102_0121030
400 Ga0496103_0001057
401 Ga0496103_0012148
402 Ga0496104_0006188
403 Ga0496105_0029106
404 Ga0496105_0045315
405 Ga0496105_0068692
406 Ga0496107_0027412
407 Ga0496107_0096966
408 Ga0496108_0015346
409 Ga0496109_0061780
410 Ga0496110_0017770
411 Ga0496111_0041771
412 Ga0496112_0143347
413 Ga0496113_0036322
414 Ga0496113_0125374
415 Ga0496114_0018234
416 Ga0496114_0021450
417 Ga0496114_0059830
418 Ga0496115_0003759
419 Ga0501034_0001881
420 Ga0501036_0071520
421 Ga0501036_0108919
422 Ga0501039_0038257
423 Ga0501043_0031570
424 Ga0501068_0027947
425 Ga0501069_0079648
426 Ga0501073_0046295
427 Ga0501076_0087170
428 Ga0501035_0013894
429 Ga0501044_0016806
430 nmdc:mga00v17_21832_c1
431 nmdc:mga0yw44_119402_c1
432 nmdc:mga0yw44_2653_c1
433 nmdc:mga0yw44_31702_c1
434 nmdc:mga06z11_13182_c1
435 nmdc:mga06z11_51761_c1
436 nmdc:mga08y16_25143_c1
437 Ga0495595_0041865
438 Ga0500593_000080
439 Ga0500573_0007445
440 Ga0466962_0022157
441 2583149644
442 2643769408
443 2644034087
444 2644089870
445 2644102539
446 2644114025
447 2644118202
448 2644231430
449 2644319715
450 2723642707
451 2738871297
452 2740166758
453 2774393672
454 2774400442
455 2808628627
456 2808902681
457 2809195444
458 2812350327
459 2848551778
460 2855387576
461 2891972054
462 2899363830
463 2899370405
464 2919398553
465 2935413122
466 2984577104
467 2990258851
468 8054612493

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02805

Ada_Zn_binding

Metal binding domain of Ada

12

76

0.98

PF12833

HTH_18

Helix-turn-helix domain

112

191

0.97

PF06029

AlkA_N

AlkA N-terminal domain

213

354

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
3oh6-assembly1.cif.gz_A alka undamaged dna complex: interrogation of a c:g base pair 0.9295 201 486
3lsg-assembly1.cif.gz_A the crystal structure of the c-terminal domain of the two-component response regulator yesn from fusobacterium nucleatum subsp. nucleatum atcc 25586 0.9203 96 190
3cvs-assembly1.cif.gz_D crystal structure of an alka host/guest complex 8oxoguanine:adenine base pair 0.9169 204 484
3ogd-assembly1.cif.gz_A alka undamaged dna complex: interrogation of a g*:c base pair 0.9136 201 484
3lsg-assembly3.cif.gz_E the crystal structure of the c-terminal domain of the two-component response regulator yesn from fusobacterium nucleatum subsp. nucleatum atcc 25586 0.8907 96 185
ID Description Score Start End Superfamily
1u8bA01 Alpha Beta;3-Layer(aba) Sandwich;DNA Methylphosphotriester Repair Domain;DNA Methylphosphotriester Repair Domain 0.9961 16 80 3.40.10.10
af_P9WJW3_2_72_3.40.10.10 Alpha Beta;3-Layer(aba) Sandwich;DNA Methylphosphotriester Repair Domain;DNA Methylphosphotriester Repair Domain 0.9763 11 79 3.40.10.10
af_Q59SD2_1_74_3.40.10.10 Alpha Beta;3-Layer(aba) Sandwich;DNA Methylphosphotriester Repair Domain;DNA Methylphosphotriester Repair Domain 0.9714 11 80 3.40.10.10
af_P32677_219_275_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9679 144 191 1.10.10.60
5suwA03 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9415 141 190 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A2M7XRR7-F1-model_v4 XRE family transcriptional regulator 0.9609 9 81 GO:0003677
GO:0006281
GO:0006355
GO:0008168
GO:0008270
AF-A0A7K2MA96-F1-model_v4 Helix-turn-helix domain-containing protein 0.9603 98 190 GO:0003700
GO:0043565
AF-A0YB32-F1-model_v4 Transcriptional regulator, AraC family protein 0.9492 90 190 GO:0003700
GO:0043565
AF-A0A3A6GD86-F1-model_v4 AraC family transcriptional regulator 0.9481 88 190 GO:0003700
GO:0043565
AF-A0A7W8U4F0-F1-model_v4 deleted 0.9479 199 490

Map