F347562

General Info

Members Datasets Scaffolds Average Seq Length
234 110 468 524

Family's Representative Sequence

Representative Sequence 3300050514|nmdc:mga08x19_80891_c1|nmdc:mga08x19_80891_c1_55_1812
Length 541
Sequence MHDEDPDGPIDQTAPVYPTSSGVATPRPWVALTPSRARAQKAGGTLRFVAQADLKILDPVWTTAYITRNHAYLVYDTLFGTDEKLAVRPQMVERHTVSRDGMKYSFTLRDGLRWHDGQPVAAEDCVESLKRWMKKDRFGRLLAAHIARLAPIDRKTFTLELGERFGPVLDALGKPSSNVPFMMPARIAATSADEQIKEIVGSGPFRFVKDEWQPGNQVVYVKHGDYVPRNEPPSGSAGGKKVKLDKVIWRYMPDAATVAAALAAGEVDWWEIPPIDFIPKIEQTASLATFLPDPLGTQGWLRPNHLHPPFNNKKARQALVAMMSQETYLQAAIGVPKYYRTCPSVFACAGPYASKAGAEGLMAQNMEHARQLVKESGYDGRPVTVVHVTDIGFLSGAALVTRELLTQAGFAVDLKAMDWSTNLAVRAKKEPPDKGGWNILHTWWMAADVMHPAVHFGVSGAGAGAWFGWPEIPQLEQLITEWVRATDQPRRKQLADAIQRLALDEVAYVPWGEWFLPTAFRRNVTGIQKFIAPLFWNVSIG

Samples

Sample ID Description Type Environment
1 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
4 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
5 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
6 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
7 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
8 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
9 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
10 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
11 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
12 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
13 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
14 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
15 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
16 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
17 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
18 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
19 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
20 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
21 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
22 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
23 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
31 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
32 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
33 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
37 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
38 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
39 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
40 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
41 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
42 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
43 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
53 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
54 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
55 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
56 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
57 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
58 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
59 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
60 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
61 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
62 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
63 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
64 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
65 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
66 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
67 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
68 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
69 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
70 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
71 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
72 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
74 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
76 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
77 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
79 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
80 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
81 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
82 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
83 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
84 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
85 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
86 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
87 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
88 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
89 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
90 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
91 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
92 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
93 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
94 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
95 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
96 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
97 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
98 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
99 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
100 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
101 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
102 2838694306 Rhizobium leguminosarum SEMIA 421 Isolate Nodule
103 2842118031 Rhizobium esperanzae SEMIA 420 Isolate Nodule
104 2842377471 Rhizobium leguminosarum SEMIA 4024 Isolate Nodule
105 2842384541 Rhizobium leguminosarum SEMIA 4025 Isolate Nodule
106 2842775625 Roseomonas sp. R-71825 Isolate Unclassified
107 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
108 2936367885 Rhizobium changzhiense WYCCWR 11290 Isolate Nodule
109 8054563764 Acuticoccus kalidii M5D2P5 Isolate Unclassified
110 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.15
Metatranscriptomes 0
Isolates 3.85

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.41
Nodule 2.14
Rhizoplane 2.14
Rhizosphere 86.32
Stem 0
Stem Tuber 0
Unclassified 6.41

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga08x19_80891_c1 3300050514 Bacteria 2133
2 JGI25406J46586_10005499 3300003203 Bacteria 5871
3 Ga0070705_100092044 3300005440 Bacteria 1892
4 Ga0070708_100041407 3300005445 Bacteria 4038
5 Ga0070708_100094072 3300005445 Bacteria 2734
6 Ga0070708_100162218 3300005445 Bacteria 2083
7 Ga0070708_100212805 3300005445 Bacteria 1811
8 Ga0068867_100030836 3300005459 Bacteria 3868
9 Ga0070706_100078801 3300005467 Bacteria 3050
10 Ga0070706_100207710 3300005467 Bacteria 1828
11 Ga0070707_100042815 3300005468 Bacteria 4335
12 Ga0070707_100056302 3300005468 Bacteria 3771
13 Ga0070707_100135416 3300005468 Bacteria 2396
14 Ga0070698_100047048 3300005471 Bacteria 4410
15 Ga0070698_100136734 3300005471 Bacteria 2404
16 Ga0070698_100183222 3300005471 Unclassified 2032
17 Ga0070699_100027493 3300005518 Bacteria 4905
18 Ga0070697_100004097 3300005536 Bacteria 11173
19 Ga0070697_100059576 3300005536 Bacteria 3109
20 Ga0070697_100149355 3300005536 Unclassified 1969
21 Ga0070695_100011990 3300005545 Bacteria 5193
22 Ga0070693_100008806 3300005547 Bacteria 4999
23 Ga0081455_10010565 3300005937 Bacteria 9350
24 Ga0081539_10000259 3300005985 Bacteria 121997
25 Ga0070717_10155364 3300006028 Unclassified 1982
26 Ga0075365_10077553 3300006038 Bacteria 2245
27 Ga0075432_10005588 3300006058 Plasmid 4281
28 Ga0070712_100007730 3300006175 Bacteria 6727
29 Ga0070712_100066863 3300006175 Bacteria 2556
30 Ga0075362_10007405 3300006177 Bacteria 4156
31 Ga0075362_10010258 3300006177 Bacteria 3652
32 Ga0075362_10024249 3300006177 Bacteria 2572
33 Ga0075367_10051651 3300006178 Bacteria 2430
34 Ga0075366_10016638 3300006195 Bacteria 4228
35 Ga0075366_10022744 3300006195 Bacteria 3649
36 Ga0075370_10032218 3300006353 Bacteria 2929
37 Ga0068871_100021129 3300006358 Bacteria 4998
38 Ga0075428_100002295 3300006844 Bacteria 20695
39 Ga0075428_100005476 3300006844 Bacteria 14111
40 Ga0075428_100018978 3300006844 Bacteria 7606
41 Ga0075428_100197860 3300006844 Unclassified 2173
42 Ga0075430_100000429 3300006846 Bacteria 31180
43 Ga0075430_100002687 3300006846 Bacteria 14836
44 Ga0075430_100026195 3300006846 Bacteria 4962
45 Ga0075430_100039532 3300006846 Bacteria 3993
46 Ga0075431_100003207 3300006847 Bacteria 15825
47 Ga0075431_100007490 3300006847 Bacteria 10869
48 Ga0075431_100028496 3300006847 Bacteria 5740
49 Ga0075431_100040987 3300006847 Bacteria 4774
50 Ga0075431_100044034 3300006847 Bacteria 4603
51 Ga0075431_100077528 3300006847 Bacteria 3430
52 Ga0075431_100179485 3300006847 Unclassified 2173
53 Ga0075433_10001116 3300006852 Bacteria 19408
54 Ga0075433_10003008 3300006852 Bacteria 12947
55 Ga0075433_10043872 3300006852 Bacteria 3883
56 Ga0075433_10047032 3300006852 Bacteria 3753
57 Ga0075433_10067148 3300006852 Bacteria 3147
58 Ga0075433_10072298 3300006852 Bacteria 3032
59 Ga0075433_10113647 3300006852 Unclassified 2402
60 Ga0075434_100002902 3300006871 Bacteria 15216
61 Ga0075434_100003554 3300006871 Bacteria 13915
62 Ga0075434_100004775 3300006871 Bacteria 12271
63 Ga0075434_100022624 3300006871 Bacteria 6120
64 Ga0075434_100027525 3300006871 Bacteria 5583
65 Ga0075434_100066750 3300006871 Bacteria 3584
66 Ga0075434_100073222 3300006871 Bacteria 3418
67 Ga0075429_100000554 3300006880 Bacteria 28574
68 Ga0075429_100005387 3300006880 Bacteria 11010
69 Ga0075429_100017083 3300006880 Bacteria 6274
70 Ga0075429_100127811 3300006880 Bacteria 2223
71 Ga0075429_100133314 3300006880 Unclassified 2173
72 Ga0075429_100179845 3300006880 Unclassified 1854
73 Ga0075436_100000068 3300006914 Bacteria 62600
74 Ga0075436_100003693 3300006914 Bacteria 10492
75 Ga0075436_100090631 3300006914 Bacteria 2125
76 Ga0075436_100111626 3300006914 Bacteria 1909
77 Ga0075435_100005759 3300007076 Bacteria 8700
78 Ga0075435_100009773 3300007076 Bacteria 6979
79 Ga0075435_100017760 3300007076 Bacteria 5391
80 Ga0075435_100041142 3300007076 Bacteria 3693
81 Ga0075435_100057810 3300007076 Bacteria 3138
82 Ga0075435_100060256 3300007076 Bacteria 3077
83 Ga0075435_100082565 3300007076 Unclassified 2641
84 Ga0099794_10017952 3300007265 Bacteria 3163
85 Ga0111539_10002907 3300009094 Bacteria 22722
86 Ga0111539_10189334 3300009094 Unclassified 2401
87 Ga0105245_10005455 3300009098 Bacteria 11172
88 Ga0114129_10000065 3300009147 Bacteria 94355
89 Ga0114129_10000255 3300009147 Bacteria 60251
90 Ga0114129_10002704 3300009147 Bacteria 24696
91 Ga0114129_10015355 3300009147 Bacteria 10896
92 Ga0114129_10016978 3300009147 Bacteria 10362
93 Ga0114129_10018247 3300009147 Bacteria 9991
94 Ga0114129_10033685 3300009147 Bacteria 7237
95 Ga0114129_10039126 3300009147 Bacteria 6687
96 Ga0114129_10043779 3300009147 Bacteria 6299
97 Ga0114129_10110439 3300009147 Unclassified 3795
98 Ga0114129_10136308 3300009147 Bacteria 3368
99 Ga0114129_10142602 3300009147 Unclassified 3283
100 Ga0114129_10147819 3300009147 Bacteria 3218
101 Ga0105242_10075437 3300009176 Bacteria 2807
102 Ga0105248_10050010 3300009177 Bacteria 4687
103 Ga0105249_10051594 3300009553 Bacteria 3753
104 Ga0157378_10068175 3300013297 Bacteria 3189
105 Ga0163162_10019673 3300013306 Bacteria 6628
106 Ga0163163_10009038 3300014325 Bacteria 8877
107 Ga0213875_10001946 3300021388 Bacteria 12777
108 Ga0207699_10032237 3300025906 Bacteria 2951
109 Ga0207684_10005858 3300025910 Bacteria 11254
110 Ga0207684_10019550 3300025910 Bacteria 5793
111 Ga0207684_10020346 3300025910 Bacteria 5670
112 Ga0207693_10015349 3300025915 Bacteria 6146
113 Ga0207693_10091810 3300025915 Bacteria 2380
114 Ga0207693_10136322 3300025915 Bacteria 1930
115 Ga0207646_10003307 3300025922 Bacteria 18333
116 Ga0207646_10012912 3300025922 Bacteria 8005
117 Ga0207646_10031498 3300025922 Bacteria 4800
118 Ga0207646_10043240 3300025922 Bacteria 4046
119 Ga0207646_10092814 3300025922 Bacteria 2702
120 Ga0207681_10074222 3300025923 Bacteria 2382
121 Ga0207687_10025061 3300025927 Bacteria 3991
122 Ga0207700_10087402 3300025928 Bacteria 2452
123 Ga0207679_10144785 3300025945 Viruses 1926
124 Ga0207648_10117705 3300026089 Bacteria 2335
125 Ga0207428_10000115 3300027907 Bacteria 109072
126 Ga0207428_10004521 3300027907 Bacteria 13191
127 Ga0265329_10025192 3300031242 Bacteria 1971
128 Ga0307408_100031857 3300031548 Bacteria 3673
129 Ga0307416_100024768 3300032002 Bacteria 4387
130 Ga0395900_0045014 3300037418 Bacteria 4545
131 Ga0395898_0046654 3300037466 Bacteria 4255
132 Ga0395905_0041910 3300037471 Bacteria 4296
133 Ga0436364_1405230 3300037853 Bacteria 14749
134 Ga0395901_0038181 3300038443 Bacteria 4968
135 Ga0436363_0272388 3300039450 Bacteria 3421
136 Ga0453683_0012167 3300044673 Bacteria 5646
137 Ga0453683_0059275 3300044673 Bacteria 2393
138 Ga0451576_0051394 3300045051 Bacteria 4321
139 Ga0495642_0049908 3300046528 Bacteria 1719
140 Ga0495656_0020850 3300046615 Bacteria 2546
141 Ga0496104_0001680 3300048907 Bacteria 19107
142 Ga0496106_0027916 3300048909 Bacteria 4202
143 Ga0496107_0113952 3300048910 Bacteria 1989
144 Ga0496110_0065350 3300048913 Bacteria 3216
145 Ga0496112_0042844 3300048915 Bacteria 4430
146 Ga0501033_0046805 3300049570 Bacteria 3216
147 Ga0501034_0000758 3300049571 Bacteria 48575
148 Ga0501038_0058579 3300049574 Bacteria 3302
149 Ga0501040_0016363 3300049576 Bacteria 4909
150 Ga0501040_0017263 3300049576 Bacteria 4789
151 Ga0501041_0077797 3300049577 Bacteria 2041
152 Ga0501042_0086632 3300049578 Bacteria 2246
153 Ga0501043_0131441 3300049579 Bacteria 1962
154 Ga0501046_0081579 3300049580 Bacteria 2498
155 Ga0501046_0095255 3300049580 Bacteria 2287
156 Ga0501047_0104166 3300049581 Bacteria 2718
157 Ga0501068_0030719 3300049584 Bacteria 3189
158 Ga0501069_0012022 3300049585 Bacteria 4596
159 Ga0501071_0078391 3300049587 Bacteria 2414
160 Ga0501072_0022152 3300049588 Bacteria 4929
161 Ga0501072_0037009 3300049588 Bacteria 3828
162 Ga0501076_0003834 3300049592 Bacteria 10589
163 Ga0501076_0074945 3300049592 Bacteria 2712
164 Ga0501077_0022698 3300049593 Bacteria 3976
165 Ga0501079_0004683 3300049741 Bacteria 10133
166 nmdc:mga03683_3711_c1 3300050489 Bacteria 4973
167 nmdc:mga03683_38710_c1 3300050489 Bacteria 1949
168 nmdc:mga0k408_16911_c1 3300050493 Bacteria 4056
169 nmdc:mga0k408_48312_c1 3300050493 Bacteria 2461
170 nmdc:mga07m45_19393_c1 3300050496 Bacteria 3685
171 nmdc:mga05p37_1056_c1 3300050507 Bacteria 31456
172 nmdc:mga05p37_11099_c1 3300050507 Bacteria 10705
173 nmdc:mga05p37_119951_c1 3300050507 Bacteria 3231
174 nmdc:mga05p37_12115_c2 3300050507 Bacteria 5551
175 nmdc:mga05p37_1379_c1 3300050507 Bacteria 28244
176 nmdc:mga05p37_1579_c1 3300050507 Bacteria 26473
177 nmdc:mga05p37_17336_c1 3300050507 Bacteria 8689
178 nmdc:mga05p37_237609_c1 3300050507 Bacteria 2193
179 nmdc:mga05p37_572_c2 3300050507 Bacteria 11836
180 nmdc:mga05p37_855_c1 3300050507 Bacteria 34301
181 nmdc:mga09592_116234_c1 3300050508 Unclassified 2296
182 nmdc:mga09592_133787_c1 3300050508 Bacteria 2135
183 nmdc:mga09592_22605_c1 3300050508 Bacteria 5192
184 nmdc:mga09592_285_c1 3300050508 Bacteria 36893
185 nmdc:mga09592_9204_c1 3300050508 Bacteria 8034
186 nmdc:mga09592_9670_c1 3300050508 Bacteria 7836
187 nmdc:mga0qj67_33574_c1 3300050509 Unclassified 4005
188 nmdc:mga0qj67_57342_c1 3300050509 Bacteria 3087
189 nmdc:mga0qj67_671_c1 3300050509 Bacteria 23302
190 nmdc:mga0qj67_7513_c1 3300050509 Bacteria 8052
191 nmdc:mga06r32_15517_c1 3300050510 Bacteria 6919
192 nmdc:mga06r32_15553_c1 3300050510 Bacteria 6911
193 nmdc:mga06r32_242212_c1 3300050510 Bacteria 1791
194 nmdc:mga06r32_37618_c1 3300050510 Bacteria 4578
195 nmdc:mga06r32_4750_c1 3300050510 Bacteria 12210
196 nmdc:mga06r32_5776_c1 3300050510 Bacteria 11150
197 nmdc:mga06r32_9773_c1 3300050510 Bacteria 8662
198 nmdc:mga08y16_2980_c1 3300050511 Bacteria 17456
199 nmdc:mga08y16_3296_c1 3300050511 Bacteria 16720
200 nmdc:mga08y16_3749_c1 3300050511 Bacteria 15828
201 nmdc:mga0n895_1249_c1 3300050512 Bacteria 18759
202 nmdc:mga0n895_148428_c1 3300050512 Bacteria 2374
203 nmdc:mga0n895_184492_c1 3300050512 Bacteria 2118
204 nmdc:mga0n895_3828_c1 3300050512 Bacteria 12204
205 nmdc:mga0n895_58826_c1 3300050512 Unclassified 3791
206 nmdc:mga0rr50_108893_c1 3300050513 Bacteria 2190
207 nmdc:mga0rr50_17568_c1 3300050513 Bacteria 4779
208 nmdc:mga0rr50_3337_c2 3300050513 Bacteria 7016
209 nmdc:mga0rr50_35688_c1 3300050513 Plasmid 3573
210 nmdc:mga0rr50_434_c1 3300050513 Bacteria 22445
211 nmdc:mga08x19_1172_c1 3300050514 Bacteria 16431
212 nmdc:mga08x19_62194_c1 3300050514 Bacteria 2420
213 nmdc:mga0a205_108_c1 3300050515 Bacteria 47940
214 nmdc:mga0a205_122193_c1 3300050515 Bacteria 2504
215 nmdc:mga0a205_1328_c1 3300050515 Bacteria 20870
216 nmdc:mga0a205_17143_c1 3300050515 Bacteria 6783
217 nmdc:mga0a205_44345_c1 3300050515 Bacteria 4286
218 nmdc:mga0a205_76510_c1 3300050515 Bacteria 3234
219 nmdc:mga0a205_809_c1 3300050515 Bacteria 25452
220 nmdc:mga0sz30_25071_c1 3300050516 Bacteria 2438
221 nmdc:mga0sz30_3853_c1 3300050516 Bacteria 5404
222 Ga0501084_0002999 3300054114 Bacteria 13674
223 Ga0501084_0028332 3300054114 Bacteria 4681
224 Ga0501082_0067989 3300060353 Bacteria 3068
225 Ga0530510_0002288 3300061734 Bacteria 13135
226 2838699529 2838694306 Bacteria 6853137
227 2842124597 2842118031 Bacteria 7033875
228 2842384225 2842377471 Bacteria 7140707
229 2842389641 2842384541 Bacteria 7057858
230 2842776455 2842775625 Bacteria 5587290
231 2929206483 2929199973 Bacteria 7260745
232 2936374038 2936367885 Bacteria 7324495
233 8054567838 8054563764 Bacteria 5592885
234 8055911532 8055909800 Bacteria 7278581
235 nmdc:mga08x19_80891_c1
236 JGI25406J46586_10005499
237 Ga0070705_100092044
238 Ga0070708_100041407
239 Ga0070708_100094072
240 Ga0070708_100162218
241 Ga0070708_100212805
242 Ga0068867_100030836
243 Ga0070706_100078801
244 Ga0070706_100207710
245 Ga0070707_100042815
246 Ga0070707_100056302
247 Ga0070707_100135416
248 Ga0070698_100047048
249 Ga0070698_100136734
250 Ga0070698_100183222
251 Ga0070699_100027493
252 Ga0070697_100004097
253 Ga0070697_100059576
254 Ga0070697_100149355
255 Ga0070695_100011990
256 Ga0070693_100008806
257 Ga0081455_10010565
258 Ga0081539_10000259
259 Ga0070717_10155364
260 Ga0075365_10077553
261 Ga0075432_10005588
262 Ga0070712_100007730
263 Ga0070712_100066863
264 Ga0075362_10007405
265 Ga0075362_10010258
266 Ga0075362_10024249
267 Ga0075367_10051651
268 Ga0075366_10016638
269 Ga0075366_10022744
270 Ga0075370_10032218
271 Ga0068871_100021129
272 Ga0075428_100002295
273 Ga0075428_100005476
274 Ga0075428_100018978
275 Ga0075428_100197860
276 Ga0075430_100000429
277 Ga0075430_100002687
278 Ga0075430_100026195
279 Ga0075430_100039532
280 Ga0075431_100003207
281 Ga0075431_100007490
282 Ga0075431_100028496
283 Ga0075431_100040987
284 Ga0075431_100044034
285 Ga0075431_100077528
286 Ga0075431_100179485
287 Ga0075433_10001116
288 Ga0075433_10003008
289 Ga0075433_10043872
290 Ga0075433_10047032
291 Ga0075433_10067148
292 Ga0075433_10072298
293 Ga0075433_10113647
294 Ga0075434_100002902
295 Ga0075434_100003554
296 Ga0075434_100004775
297 Ga0075434_100022624
298 Ga0075434_100027525
299 Ga0075434_100066750
300 Ga0075434_100073222
301 Ga0075429_100000554
302 Ga0075429_100005387
303 Ga0075429_100017083
304 Ga0075429_100127811
305 Ga0075429_100133314
306 Ga0075429_100179845
307 Ga0075436_100000068
308 Ga0075436_100003693
309 Ga0075436_100090631
310 Ga0075436_100111626
311 Ga0075435_100005759
312 Ga0075435_100009773
313 Ga0075435_100017760
314 Ga0075435_100041142
315 Ga0075435_100057810
316 Ga0075435_100060256
317 Ga0075435_100082565
318 Ga0099794_10017952
319 Ga0111539_10002907
320 Ga0111539_10189334
321 Ga0105245_10005455
322 Ga0114129_10000065
323 Ga0114129_10000255
324 Ga0114129_10002704
325 Ga0114129_10015355
326 Ga0114129_10016978
327 Ga0114129_10018247
328 Ga0114129_10033685
329 Ga0114129_10039126
330 Ga0114129_10043779
331 Ga0114129_10110439
332 Ga0114129_10136308
333 Ga0114129_10142602
334 Ga0114129_10147819
335 Ga0105242_10075437
336 Ga0105248_10050010
337 Ga0105249_10051594
338 Ga0157378_10068175
339 Ga0163162_10019673
340 Ga0163163_10009038
341 Ga0213875_10001946
342 Ga0207699_10032237
343 Ga0207684_10005858
344 Ga0207684_10019550
345 Ga0207684_10020346
346 Ga0207693_10015349
347 Ga0207693_10091810
348 Ga0207693_10136322
349 Ga0207646_10003307
350 Ga0207646_10012912
351 Ga0207646_10031498
352 Ga0207646_10043240
353 Ga0207646_10092814
354 Ga0207681_10074222
355 Ga0207687_10025061
356 Ga0207700_10087402
357 Ga0207679_10144785
358 Ga0207648_10117705
359 Ga0207428_10000115
360 Ga0207428_10004521
361 Ga0265329_10025192
362 Ga0307408_100031857
363 Ga0307416_100024768
364 Ga0395900_0045014
365 Ga0395898_0046654
366 Ga0395905_0041910
367 Ga0436364_1405230
368 Ga0395901_0038181
369 Ga0436363_0272388
370 Ga0453683_0012167
371 Ga0453683_0059275
372 Ga0451576_0051394
373 Ga0495642_0049908
374 Ga0495656_0020850
375 Ga0496104_0001680
376 Ga0496106_0027916
377 Ga0496107_0113952
378 Ga0496110_0065350
379 Ga0496112_0042844
380 Ga0501033_0046805
381 Ga0501034_0000758
382 Ga0501038_0058579
383 Ga0501040_0016363
384 Ga0501040_0017263
385 Ga0501041_0077797
386 Ga0501042_0086632
387 Ga0501043_0131441
388 Ga0501046_0081579
389 Ga0501046_0095255
390 Ga0501047_0104166
391 Ga0501068_0030719
392 Ga0501069_0012022
393 Ga0501071_0078391
394 Ga0501072_0022152
395 Ga0501072_0037009
396 Ga0501076_0003834
397 Ga0501076_0074945
398 Ga0501077_0022698
399 Ga0501079_0004683
400 nmdc:mga03683_3711_c1
401 nmdc:mga03683_38710_c1
402 nmdc:mga0k408_16911_c1
403 nmdc:mga0k408_48312_c1
404 nmdc:mga07m45_19393_c1
405 nmdc:mga05p37_1056_c1
406 nmdc:mga05p37_11099_c1
407 nmdc:mga05p37_119951_c1
408 nmdc:mga05p37_12115_c2
409 nmdc:mga05p37_1379_c1
410 nmdc:mga05p37_1579_c1
411 nmdc:mga05p37_17336_c1
412 nmdc:mga05p37_237609_c1
413 nmdc:mga05p37_572_c2
414 nmdc:mga05p37_855_c1
415 nmdc:mga09592_116234_c1
416 nmdc:mga09592_133787_c1
417 nmdc:mga09592_22605_c1
418 nmdc:mga09592_285_c1
419 nmdc:mga09592_9204_c1
420 nmdc:mga09592_9670_c1
421 nmdc:mga0qj67_33574_c1
422 nmdc:mga0qj67_57342_c1
423 nmdc:mga0qj67_671_c1
424 nmdc:mga0qj67_7513_c1
425 nmdc:mga06r32_15517_c1
426 nmdc:mga06r32_15553_c1
427 nmdc:mga06r32_242212_c1
428 nmdc:mga06r32_37618_c1
429 nmdc:mga06r32_4750_c1
430 nmdc:mga06r32_5776_c1
431 nmdc:mga06r32_9773_c1
432 nmdc:mga08y16_2980_c1
433 nmdc:mga08y16_3296_c1
434 nmdc:mga08y16_3749_c1
435 nmdc:mga0n895_1249_c1
436 nmdc:mga0n895_148428_c1
437 nmdc:mga0n895_184492_c1
438 nmdc:mga0n895_3828_c1
439 nmdc:mga0n895_58826_c1
440 nmdc:mga0rr50_108893_c1
441 nmdc:mga0rr50_17568_c1
442 nmdc:mga0rr50_3337_c2
443 nmdc:mga0rr50_35688_c1
444 nmdc:mga0rr50_434_c1
445 nmdc:mga08x19_1172_c1
446 nmdc:mga08x19_62194_c1
447 nmdc:mga0a205_108_c1
448 nmdc:mga0a205_122193_c1
449 nmdc:mga0a205_1328_c1
450 nmdc:mga0a205_17143_c1
451 nmdc:mga0a205_44345_c1
452 nmdc:mga0a205_76510_c1
453 nmdc:mga0a205_809_c1
454 nmdc:mga0sz30_25071_c1
455 nmdc:mga0sz30_3853_c1
456 Ga0501084_0002999
457 Ga0501084_0028332
458 Ga0501082_0067989
459 Ga0530510_0002288
460 2838699529
461 2842124597
462 2842384225
463 2842389641
464 2842776455
465 2929206483
466 2936374038
467 8054567838
468 8055911532

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00496

SBP_bac_5

Bacterial extracellular solute-binding proteins, family 5 Middle

86

463

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
3lft-assembly1.cif.gz_A the crystal structure of the abc domain in complex with l-trp from streptococcus pneumonia to 1.35a 0.8474 369 405
7kz9-assembly2.cif.gz_B crystal structure of pseudomonas sp. pdc86 substrate-binding protein aapf in complex with a signaling molecule heheaa 0.833 34 512
4qfo-assembly1.cif.gz_A crystal structure of dipeptide binding protein from pseudoalteromonas sp. sm9913 in complex with met-leu 0.8313 35 514
6wm6-assembly1.cif.gz_A periplasmic edta-binding protein eppa, tetragonal 0.8305 32 514
4ze8-assembly3.cif.gz_C pbp acca from a. tumefaciens c58 0.8297 31 514
ID Description Score Start End Superfamily
4qflB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.913 193 280 3.40.190.10
5isuA03 Alpha Beta;Roll;Dipeptide-binding Protein; domain 3;Dipeptide-binding Protein; Domain 3 0.8958 288 485 3.10.105.10
5f1qB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8793 193 279 3.40.190.10
3tpaA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8759 193 280 3.40.190.10
4oeuB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8745 190 283 3.40.190.10
ID Description Score Start End GO Terms
AF-A0A349SIB4-F1-model_v4 ABC transporter substrate-binding protein 0.9329 35 514 GO:0015833
GO:1904680
AF-A0A2S6MHN2-F1-model_v4 ABC transporter substrate-binding protein 0.9305 52 514 GO:0015833
GO:0030288
GO:0043190
GO:1904680
AF-A0A7Z1V3U0-F1-model_v4 deleted 0.9239 17 514
AF-A0A7X8YEI5-F1-model_v4 Solute-binding protein family 5 domain-containing protein 0.9235 51 275 GO:0015833
GO:1904680
AF-A0A536UXJ9-F1-model_v4 ABC transporter substrate-binding protein 0.9172 222 514 GO:0015833
GO:1904680

Map