F347316

General Info

Members Datasets Scaffolds Average Seq Length
234 149 468 378

Family's Representative Sequence

Representative Sequence 3300039437|Ga0436365_0760437|Ga0436365_0760437_11461_12750
Length 429
Sequence LRLFRIRFYLCAFAALREILCFSSWWAQGDDFACGFAEVRDLRLLDMETVRLGIIGIGSMGSVHAQNIAAGKIPRCELTAVCDSKADRMQPFSSAEPFDSVDDFLRRSKTDAVLIATPHYAHTTIGIQALESGRHVMVEKPISVHKADAERLIAAHRRPDQVFAAMFNQRTDPFFLKLRRLVKSGELGAIRRVNWTITNWFRTDAYYQSSDWRATWAGEGGGVLLNQCPHNLDLYQWIFGLPAKVRAFCHFGRYHDIEVEDDVTAYLEYPDGMTAVFTASTGEAPGTNRLEVAAEKGRVVIENDQFLFVRNEVPMTEFSRTDSGRFSVPPVWEIKIPIDGHGPQHNGILTNFVAAILDRTPLIAPAEEGINSLELANSFLLSTLEDRTIQLPIDPVVYEKHLHKLISSSTLKKPKVVKEVSDDMSGSFR

Samples

Sample ID Description Type Environment
1 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
4 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
9 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
10 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
11 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
12 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
13 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
14 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
15 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
16 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
17 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
18 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
19 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
20 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
21 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
22 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
23 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
24 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
25 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
26 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
27 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
28 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
29 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
30 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
31 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
32 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
41 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
42 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
43 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
44 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
45 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
46 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
47 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
48 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
49 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
50 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
51 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
52 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
53 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
54 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
55 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
56 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
57 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
58 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
59 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
60 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
61 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
62 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
63 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
64 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
65 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
66 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
67 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
68 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
69 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
70 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
71 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
72 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
73 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
74 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
75 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
76 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
77 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
78 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
79 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
80 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
81 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
82 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
84 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
94 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
95 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
96 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
98 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
99 2524023129 Paenibacillus pinihumi DSM 23905 Isolate Rhizosphere
100 2548877040 Paenibacillus sonchi X19-5 Isolate Rhizosphere
101 2571042143 Paenibacillus graminis RSA19 Isolate Unclassified
102 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
103 2593339198 Paenibacillus sp. UNCCL117 Isolate Unclassified
104 2600255286 Paenibacillus sp. NFR01 Isolate Rhizoplane
105 2643221543 Paenibacillus sp. Root52 Isolate Unclassified
106 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
107 2671180694 Paenibacillus sp. A3 Isolate Unclassified
108 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
109 2738541295 Bacillus sp. OK085 Isolate Unclassified
110 2786546517 Verrucomicrobia bacterium LW23 Isolate Rhizoplane
111 2791355222 Paenibacillus oryzae 1DrF-4 Isolate Unclassified
112 2818991441 Niallia circulans 3243 Isolate Rhizosphere
113 2818991459 Paenibacillus sp. 597 Isolate Unclassified
114 2821111986 Paenibacillus illinoisensis 582 Isolate Unclassified
115 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
116 2857472729 Cohnella sp. R-74144 Isolate Unclassified
117 2864733723 Paenibacillus sp. JGP012 Isolate Rhizosphere
118 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
119 2888578766 Paenibacillus lycopersici 12200R-189 Isolate Rhizosphere
120 2889042446 Paenibacillus sp. 37 Isolate Rhizosphere
121 2889049205 Paenibacillus rhizovicinus 14171R-81 Isolate Rhizosphere
122 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
123 2904162308 Paenibacillus sp. AD87 Isolate Unclassified
124 2904490793 Paenibacillus sp. 1295 Isolate Rhizosphere
125 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
126 2907202186 Paenibacillus sp. HJL G12 Isolate Unclassified
127 2916971899 Alkalihalobacillus miscanthi AK13 Isolate Rhizosphere
128 2919160200 Paenibacillus sp. 2003 Isolate Unclassified
129 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
130 2925326138 Paenibacillus hemerocallicola KCTC 33185 Isolate Unclassified
131 2929206907 Paenibacillus sp. R-74146 Hybrid assembly Isolate Unclassified
132 2931384279 Paenibacillus sp. DR312 Isolate Rhizosphere
133 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
134 2939679117 Paenibacillus sp. 4624 Isolate Rhizosphere
135 2945991243 Paenibacillus sp. B21a W2I17 Isolate Rhizosphere
136 2946053406 Paenibacillus sp. W4I10 Isolate Rhizosphere
137 2968558590 Paenibacillus sp. P3E Isolate Rhizosphere
138 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
139 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
140 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
141 2984527788 Paenibacillus sp. SORGH_AS306 Isolate Aerial Root
142 2984532647 Paenibacillus sp. SORGH_AS338 Isolate Aerial Root
143 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
144 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
145 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere
146 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
147 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified
148 8057473075 Paenibacillus endoradicis T3-5-0-4 Isolate Unclassified
149 8057733483 Paenibacillus apiarius MW-14 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 73.08
Metatranscriptomes 0
Isolates 26.92

Biome Distribution

Category Percentage (%)
Aerial Root 0.85
Bulb 0
Endosphere 3.85
Nodule 1.28
Rhizoplane 0.85
Rhizosphere 69.66
Stem 0
Stem Tuber 0
Unclassified 5.98

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436365_0760437 3300039437 Bacteria 25244
2 rootH2_10000618 3300003320 Bacteria 35734
3 Ga0055538_1000169 3300003751 Bacteria 42724
4 Ga0055541_1002686 3300003841 Bacteria 3482
5 Ga0065707_10000979 3300005295 Bacteria 8983
6 Ga0070658_10002389 3300005327 Bacteria 15762
7 Ga0070668_100082530 3300005347 Bacteria 2521
8 Ga0070698_100106378 3300005471 Bacteria 2774
9 Ga0070697_100042753 3300005536 Bacteria 3667
10 Ga0070665_100000048 3300005548 Bacteria 265077
11 Ga0068855_100005934 3300005563 Bacteria 14893
12 Ga0068855_100030995 3300005563 Bacteria 6391
13 Ga0068855_100061541 3300005563 Unclassified 4386
14 Ga0068855_100088522 3300005563 Unclassified 3576
15 Ga0068852_100314021 3300005616 Unclassified 1520
16 Ga0068852_100348001 3300005616 Bacteria 1446
17 Ga0068863_100001472 3300005841 Bacteria 23320
18 Ga0068858_100002464 3300005842 Bacteria 18670
19 Ga0068858_100004604 3300005842 Bacteria 13496
20 Ga0081540_1085782 3300005983 Bacteria 1401
21 Ga0081539_10013048 3300005985 Bacteria 6302
22 Ga0070712_100327696 3300006175 Unclassified 1247
23 Ga0105240_10000009 3300009093 Bacteria 591332
24 Ga0105240_10018762 3300009093 Bacteria 9267
25 Ga0105240_10079966 3300009093 Bacteria 4021
26 Ga0105240_10377171 3300009093 Bacteria 1602
27 Ga0105245_10026909 3300009098 Bacteria 5064
28 Ga0105238_10028282 3300009551 Bacteria 5712
29 Ga0105238_10150561 3300009551 Bacteria 2302
30 Ga0105239_10007823 3300010375 Bacteria 12226
31 Ga0105239_10010027 3300010375 Bacteria 10623
32 Ga0105246_10004709 3300011119 Bacteria 8304
33 Ga0157374_10249811 3300013296 Bacteria 1745
34 Ga0163162_10191974 3300013306 Bacteria 2170
35 Ga0213872_10002186 3300021361 Bacteria 11723
36 Ga0213872_10017383 3300021361 Bacteria 3325
37 Ga0213872_10053926 3300021361 Bacteria 1823
38 Ga0213876_10000540 3300021384 Bacteria 28483
39 Ga0213876_10008027 3300021384 Bacteria 5722
40 Ga0213871_10009775 3300021441 Bacteria 2158
41 Ga0209784_100095 3300025224 Bacteria 109507
42 Ga0209566_100423 3300025225 Bacteria 32484
43 Ga0209566_100593 3300025225 Bacteria 22914
44 Ga0209566_100681 3300025225 Bacteria 19953
45 Ga0209147_105195 3300025229 Bacteria 1994
46 Ga0209437_100716 3300025233 Bacteria 16950
47 Ga0207699_10105452 3300025906 Unclassified 1797
48 Ga0207684_10067706 3300025910 Bacteria 3034
49 Ga0207695_10000038 3300025913 Bacteria 475092
50 Ga0207695_10043057 3300025913 Unclassified 4815
51 Ga0207695_10062001 3300025913 Bacteria 3862
52 Ga0207694_10298682 3300025924 Bacteria 1326
53 Ga0207667_10002832 3300025949 Bacteria 21530
54 Ga0207667_10024588 3300025949 Bacteria 6609
55 Ga0207667_10033764 3300025949 Bacteria 5498
56 Ga0207667_10076467 3300025949 Unclassified 3474
57 Ga0207703_10003738 3300026035 Bacteria 12663
58 Ga0207641_10001473 3300026088 Bacteria 23100
59 Ga0207641_10019879 3300026088 Bacteria 5511
60 Ga0268266_10000113 3300028379 Bacteria 166718
61 Ga0265337_1013589 3300028556 Bacteria 2726
62 Ga0265326_10030673 3300028558 Unclassified 1532
63 Ga0265319_1000223 3300028563 Bacteria 42376
64 Ga0265319_1004880 3300028563 Bacteria 6560
65 Ga0265318_10000598 3300028577 Bacteria 25160
66 Ga0265318_10041015 3300028577 Bacteria 1761
67 Ga0265323_10000025 3300028653 Bacteria 82188
68 Ga0265323_10014896 3300028653 Bacteria 3066
69 Ga0265323_10041154 3300028653 Bacteria 1678
70 Ga0265322_10000472 3300028654 Bacteria 16054
71 Ga0307515_10000901 3300028794 Bacteria 68376
72 Ga0265338_10000798 3300028800 Bacteria 53237
73 Ga0265338_10032645 3300028800 Bacteria 5070
74 Ga0265338_10060098 3300028800 Bacteria 3343
75 Ga0265324_10009426 3300029957 Unclassified 3813
76 Ga0265330_10101039 3300031235 Unclassified 1235
77 Ga0265320_10000407 3300031240 Bacteria 34383
78 Ga0265320_10001364 3300031240 Bacteria 17814
79 Ga0265320_10004068 3300031240 Bacteria 9607
80 Ga0265320_10004625 3300031240 Bacteria 8994
81 Ga0265320_10009835 3300031240 Bacteria 5733
82 Ga0265331_10002742 3300031250 Bacteria 11722
83 Ga0265331_10065199 3300031250 Bacteria 1713
84 Ga0265327_10000023 3300031251 Bacteria 382703
85 Ga0265327_10000204 3300031251 Bacteria 123713
86 Ga0265327_10134100 3300031251 Bacteria 1162
87 Ga0265316_10005916 3300031344 Bacteria 11785
88 Ga0265316_10147563 3300031344 Bacteria 1763
89 Ga0265316_10169458 3300031344 Bacteria 1629
90 Ga0265313_10001523 3300031595 Bacteria 21565
91 Ga0265313_10001654 3300031595 Bacteria 20661
92 Ga0307508_10000449 3300031616 Bacteria 49299
93 Ga0265314_10019948 3300031711 Bacteria 5183
94 Ga0265314_10055875 3300031711 Unclassified 2721
95 Ga0265342_10014529 3300031712 Bacteria 5223
96 Ga0265342_10124711 3300031712 Bacteria 1447
97 Ga0316577_10021165 3300031733 Bacteria 3607
98 Ga0373933_0079861 3300035724 Bacteria 2004
99 Ga0316582_0001967 3300036647 Bacteria 9403
100 Ga0316582_0033896 3300036647 Bacteria 3140
101 Ga0395905_0011197 3300037471 Bacteria 8672
102 Ga0395905_0099510 3300037471 Bacteria 2731
103 Ga0436364_0214529 3300037853 Unclassified 2056
104 Ga0436364_0810922 3300037853 Bacteria 5398
105 Ga0436365_0240337 3300039437 Bacteria 2384
106 Ga0436365_0905631 3300039437 Bacteria 68672
107 Ga0436365_0957559 3300039437 Bacteria 13222
108 Ga0436360_0015851 3300039438 Bacteria 1708
109 Ga0436360_1372323 3300039438 Bacteria 1287
110 Ga0436361_0140374 3300039447 Bacteria 14819
111 Ga0436361_0295987 3300039447 Bacteria 1300
112 Ga0436361_0341413 3300039447 Bacteria 1460
113 Ga0436361_0827548 3300039447 Bacteria 1530
114 Ga0436361_0963306 3300039447 Bacteria 4098
115 Ga0436361_1015450 3300039447 Bacteria 2311
116 Ga0436361_1026818 3300039447 Bacteria 5875
117 Ga0436363_0439431 3300039450 Bacteria 3009
118 Ga0436363_1427117 3300039450 Bacteria 3743
119 Ga0436363_1668544 3300039450 Bacteria 9010
120 Ga0436362_0079508 3300039453 Bacteria 1504
121 Ga0436362_1113165 3300039453 Bacteria 2112
122 Ga0439449_0004352 3300042007 Bacteria 5467
123 Ga0439449_0012622 3300042007 Bacteria 3178
124 Ga0451577_0000150 3300042876 Bacteria 154181
125 Ga0451577_0002106 3300042876 Bacteria 24519
126 Ga0451577_0054182 3300042876 Bacteria 3581
127 Ga0466969_0011218 3300044656 Bacteria 4743
128 Ga0466966_0035002 3300044684 Unclassified 3246
129 Ga0466961_0014272 3300044693 Bacteria 5099
130 Ga0453684_0000118 3300044712 Bacteria 346595
131 Ga0453684_0018128 3300044712 Bacteria 10836
132 Ga0453684_0066442 3300044712 Bacteria 4592
133 Ga0453684_0071000 3300044712 Bacteria 4406
134 Ga0453684_0073624 3300044712 Bacteria 4305
135 Ga0453684_0174914 3300044712 Bacteria 2526
136 Ga0466959_0014965 3300045049 Bacteria 5653
137 Ga0451576_0105251 3300045051 Bacteria 2935
138 Ga0496116_0008862 3300048919 Bacteria 8660
139 Ga0496116_0017918 3300048919 Bacteria 5476
140 Ga0496118_0113430 3300048921 Unclassified 1791
141 Ga0496121_0090681 3300048924 Bacteria 2389
142 Ga0496122_0007373 3300048925 Bacteria 12257
143 Ga0496122_0175794 3300048925 Bacteria 1283
144 Ga0496122_0193776 3300048925 Bacteria 1196
145 Ga0496123_0077461 3300048926 Bacteria 2042
146 Ga0496123_0106609 3300048926 Bacteria 1614
147 Ga0496123_0185217 3300048926 Bacteria 1083
148 Ga0496124_0028270 3300048927 Bacteria 5019
149 Ga0496125_0001581 3300048928 Bacteria 32367
150 Ga0496125_0021281 3300048928 Bacteria 6056
151 Ga0501032_0000184 3300049569 Bacteria 51636
152 Ga0501032_0001773 3300049569 Bacteria 17031
153 Ga0501033_0000031 3300049570 Bacteria 156672
154 Ga0501036_0000891 3300049572 Bacteria 22321
155 Ga0501037_0002728 3300049573 Bacteria 12769
156 Ga0501038_0001413 3300049574 Bacteria 21965
157 Ga0501039_0013572 3300049575 Bacteria 6231
158 Ga0501042_0002576 3300049578 Bacteria 11147
159 Ga0501043_0035420 3300049579 Bacteria 3926
160 Ga0501046_0007710 3300049580 Bacteria 9439
161 Ga0501046_0127237 3300049580 Bacteria 1934
162 Ga0501047_0013735 3300049581 Bacteria 7688
163 Ga0501048_0001284 3300049582 Bacteria 19044
164 Ga0501068_0107365 3300049584 Bacteria 1733
165 Ga0501070_0077852 3300049586 Bacteria 2744
166 Ga0501083_0003886 3300049744 Bacteria 10491
167 Ga0501083_0077775 3300049744 Bacteria 2201
168 Ga0501083_0104267 3300049744 Bacteria 1868
169 Ga0501035_0011266 3300049822 Bacteria 8284
170 Ga0501044_0001730 3300049823 Bacteria 25539
171 Ga0500568_0008085 3300053139 Bacteria 5106
172 2524189941 2524023129 Bacteria 6762600
173 2550901324 2548877040 Bacteria 7507281
174 2571528360 2571042143 Bacteria 6986194
175 2587737968 2585428059 Bacteria 8696589
176 2595316261 2593339198 Bacteria 7267884
177 2601640606 2600255286 Bacteria 5390125
178 2643740116 2643221543 Bacteria 6628015
179 2644423621 2643221676 Bacteria 8119172
180 2673819901 2671180694 Bacteria 7506943
181 2728534867 2728368933 Bacteria 7044283
182 2738817159 2738541295 Bacteria 5730091
183 2787436146 2786546517 Bacteria 6614109
184 2793183555 2791355222 Bacteria 5898266
185 2819570250 2818991441 Bacteria 5062707
186 2819670322 2818991459 Bacteria 8736032
187 2819671017 2818991459 Bacteria 8736032
188 2821113441 2821111986 Bacteria 6894338
189 2857453540 2857453340 Bacteria 8090534
190 2857457115 2857453340 Bacteria 8090534
191 2857479066 2857472729 Bacteria 6568124
192 2864739799 2864733723 Bacteria 6770668
193 2885526808 2885526491 Bacteria 7164189
194 2888580774 2888578766 Bacteria 6743310
195 2888583931 2888578766 Bacteria 6743310
196 2889044939 2889042446 Bacteria 7618936
197 2889050548 2889049205 Bacteria 7524325
198 2889053624 2889049205 Bacteria 7524325
199 2904119714 2904113452 Bacteria 7796941
200 2904165331 2904162308 Bacteria 7086713
201 2904491826 2904490793 Bacteria 7046938
202 2904756621 2904755435 Bacteria 7986759
203 2904758643 2904755435 Bacteria 7986759
204 2904760254 2904755435 Bacteria 7986759
205 2907208014 2907202186 Bacteria 6632024
206 2916976036 2916971899 Bacteria 4250608
207 2919161079 2919160200 Bacteria 6929020
208 2919427309 2919425241 Bacteria 8055701
209 2925326561 2925326138 Bacteria 9652120
210 2929207299 2929206907 Bacteria 5918291
211 2931388375 2931384279 Bacteria 7299545
212 2938649335 2938649242 Bacteria 7118381
213 2939681258 2939679117 Bacteria 6921672
214 2945993018 2945991243 Bacteria 7008369
215 2946055773 2946053406 Bacteria 6978655
216 2968564880 2968558590 Bacteria 6956864
217 2971406122 2971403814 Bacteria 7370929
218 2971416893 2971410472 Bacteria 8311090
219 2971417157 2971410472 Bacteria 8311090
220 2980187025 2980182181 Bacteria 9454109
221 2980187882 2980182181 Bacteria 9454109
222 2984531651 2984527788 Bacteria 5288478
223 2984532903 2984532647 Bacteria 5288506
224 2988231511 2988225383 Bacteria 7221625
225 2996633578 2996632988 Bacteria 6921523
226 8054468368 8054465665 Bacteria 7323556
227 8054795599 8054795415 Bacteria 9785225
228 8054795826 8054795415 Bacteria 9785225
229 8054802606 8054795415 Bacteria 9785225
230 8056533843 8056533031 Bacteria 8964429
231 8056534200 8056533031 Bacteria 8964429
232 8056539819 8056533031 Bacteria 8964429
233 8057475767 8057473075 Bacteria 5892720
234 8057733526 8057733483 Bacteria 6578323
235 Ga0436365_0760437
236 rootH2_10000618
237 Ga0055538_1000169
238 Ga0055541_1002686
239 Ga0065707_10000979
240 Ga0070658_10002389
241 Ga0070668_100082530
242 Ga0070698_100106378
243 Ga0070697_100042753
244 Ga0070665_100000048
245 Ga0068855_100005934
246 Ga0068855_100030995
247 Ga0068855_100061541
248 Ga0068855_100088522
249 Ga0068852_100314021
250 Ga0068852_100348001
251 Ga0068863_100001472
252 Ga0068858_100002464
253 Ga0068858_100004604
254 Ga0081540_1085782
255 Ga0081539_10013048
256 Ga0070712_100327696
257 Ga0105240_10000009
258 Ga0105240_10018762
259 Ga0105240_10079966
260 Ga0105240_10377171
261 Ga0105245_10026909
262 Ga0105238_10028282
263 Ga0105238_10150561
264 Ga0105239_10007823
265 Ga0105239_10010027
266 Ga0105246_10004709
267 Ga0157374_10249811
268 Ga0163162_10191974
269 Ga0213872_10002186
270 Ga0213872_10017383
271 Ga0213872_10053926
272 Ga0213876_10000540
273 Ga0213876_10008027
274 Ga0213871_10009775
275 Ga0209784_100095
276 Ga0209566_100423
277 Ga0209566_100593
278 Ga0209566_100681
279 Ga0209147_105195
280 Ga0209437_100716
281 Ga0207699_10105452
282 Ga0207684_10067706
283 Ga0207695_10000038
284 Ga0207695_10043057
285 Ga0207695_10062001
286 Ga0207694_10298682
287 Ga0207667_10002832
288 Ga0207667_10024588
289 Ga0207667_10033764
290 Ga0207667_10076467
291 Ga0207703_10003738
292 Ga0207641_10001473
293 Ga0207641_10019879
294 Ga0268266_10000113
295 Ga0265337_1013589
296 Ga0265326_10030673
297 Ga0265319_1000223
298 Ga0265319_1004880
299 Ga0265318_10000598
300 Ga0265318_10041015
301 Ga0265323_10000025
302 Ga0265323_10014896
303 Ga0265323_10041154
304 Ga0265322_10000472
305 Ga0307515_10000901
306 Ga0265338_10000798
307 Ga0265338_10032645
308 Ga0265338_10060098
309 Ga0265324_10009426
310 Ga0265330_10101039
311 Ga0265320_10000407
312 Ga0265320_10001364
313 Ga0265320_10004068
314 Ga0265320_10004625
315 Ga0265320_10009835
316 Ga0265331_10002742
317 Ga0265331_10065199
318 Ga0265327_10000023
319 Ga0265327_10000204
320 Ga0265327_10134100
321 Ga0265316_10005916
322 Ga0265316_10147563
323 Ga0265316_10169458
324 Ga0265313_10001523
325 Ga0265313_10001654
326 Ga0307508_10000449
327 Ga0265314_10019948
328 Ga0265314_10055875
329 Ga0265342_10014529
330 Ga0265342_10124711
331 Ga0316577_10021165
332 Ga0373933_0079861
333 Ga0316582_0001967
334 Ga0316582_0033896
335 Ga0395905_0011197
336 Ga0395905_0099510
337 Ga0436364_0214529
338 Ga0436364_0810922
339 Ga0436365_0240337
340 Ga0436365_0905631
341 Ga0436365_0957559
342 Ga0436360_0015851
343 Ga0436360_1372323
344 Ga0436361_0140374
345 Ga0436361_0295987
346 Ga0436361_0341413
347 Ga0436361_0827548
348 Ga0436361_0963306
349 Ga0436361_1015450
350 Ga0436361_1026818
351 Ga0436363_0439431
352 Ga0436363_1427117
353 Ga0436363_1668544
354 Ga0436362_0079508
355 Ga0436362_1113165
356 Ga0439449_0004352
357 Ga0439449_0012622
358 Ga0451577_0000150
359 Ga0451577_0002106
360 Ga0451577_0054182
361 Ga0466969_0011218
362 Ga0466966_0035002
363 Ga0466961_0014272
364 Ga0453684_0000118
365 Ga0453684_0018128
366 Ga0453684_0066442
367 Ga0453684_0071000
368 Ga0453684_0073624
369 Ga0453684_0174914
370 Ga0466959_0014965
371 Ga0451576_0105251
372 Ga0496116_0008862
373 Ga0496116_0017918
374 Ga0496118_0113430
375 Ga0496121_0090681
376 Ga0496122_0007373
377 Ga0496122_0175794
378 Ga0496122_0193776
379 Ga0496123_0077461
380 Ga0496123_0106609
381 Ga0496123_0185217
382 Ga0496124_0028270
383 Ga0496125_0001581
384 Ga0496125_0021281
385 Ga0501032_0000184
386 Ga0501032_0001773
387 Ga0501033_0000031
388 Ga0501036_0000891
389 Ga0501037_0002728
390 Ga0501038_0001413
391 Ga0501039_0013572
392 Ga0501042_0002576
393 Ga0501043_0035420
394 Ga0501046_0007710
395 Ga0501046_0127237
396 Ga0501047_0013735
397 Ga0501048_0001284
398 Ga0501068_0107365
399 Ga0501070_0077852
400 Ga0501083_0003886
401 Ga0501083_0077775
402 Ga0501083_0104267
403 Ga0501035_0011266
404 Ga0501044_0001730
405 Ga0500568_0008085
406 2524189941
407 2550901324
408 2571528360
409 2587737968
410 2595316261
411 2601640606
412 2643740116
413 2644423621
414 2673819901
415 2728534867
416 2738817159
417 2787436146
418 2793183555
419 2819570250
420 2819670322
421 2819671017
422 2821113441
423 2857453540
424 2857457115
425 2857479066
426 2864739799
427 2885526808
428 2888580774
429 2888583931
430 2889044939
431 2889050548
432 2889053624
433 2904119714
434 2904165331
435 2904491826
436 2904756621
437 2904758643
438 2904760254
439 2907208014
440 2916976036
441 2919161079
442 2919427309
443 2925326561
444 2929207299
445 2931388375
446 2938649335
447 2939681258
448 2945993018
449 2946055773
450 2968564880
451 2971406122
452 2971416893
453 2971417157
454 2980187025
455 2980187882
456 2984531651
457 2984532903
458 2988231511
459 2996633578
460 8054468368
461 8054795599
462 8054795826
463 8054802606
464 8056533843
465 8056534200
466 8056539819
467 8057475767
468 8057733526

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22725

GFO_IDH_MocA_C3

GFO/IDH/MocA C-terminal domain

175

300

0.96

PF01408

GFO_IDH_MocA

Oxidoreductase family, NAD-binding Rossmann fold

50

167

0.93

PF02894

GFO_IDH_MocA_C

Oxidoreductase family, C-terminal alpha/beta domain

179

391

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
3q2k-assembly1.cif.gz_E crystal structure of the wlba dehydrogenase from bordetella pertussis in complex with nadh and udp-glcnaca 0.901 3 348
3q2k-assembly2.cif.gz_L crystal structure of the wlba dehydrogenase from bordetella pertussis in complex with nadh and udp-glcnaca 0.9006 3 348
3q2k-assembly2.cif.gz_P crystal structure of the wlba dehydrogenase from bordetella pertussis in complex with nadh and udp-glcnaca 0.8997 3 348
3q2k-assembly1.cif.gz_E crystal structure of the wlba dehydrogenase from bordetella pertussis in complex with nadh and udp-glcnaca 0.8956 3 348
3q2k-assembly2.cif.gz_L crystal structure of the wlba dehydrogenase from bordetella pertussis in complex with nadh and udp-glcnaca 0.8952 3 348
ID Description Score Start End Superfamily
3q2kD02 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9197 130 348 3.30.360.10
af_Q66GR2_10_139_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9105 5 119 3.40.50.720
3q2kD02 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9087 130 348 3.30.360.10
af_Q9VJH7_91_211_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9048 3 109 3.40.50.720
af_Q2G1E6_2_122_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9025 3 109 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2A2R0K8-F1-model_v4 Oxidoreductase 0.9822 1 381 GO:0000166
GO:0016491
AF-A0A1V5VCS1-F1-model_v4 Inositol 2-dehydrogenase (EC 1.1.1.18) 0.9799 1 362 GO:0000166
GO:0050112
AF-A0A2A2R0K8-F1-model_v4 Oxidoreductase 0.9771 1 381 GO:0000166
GO:0016491
AF-A0A3B9NPN1-F1-model_v4 Oxidoreductase 0.9713 3 382 GO:0000166
GO:0016491
AF-A0A1G0Z262-F1-model_v4 Oxidoreductase 0.9708 1 362 GO:0000166
GO:0016491

Map