F347166

General Info

Members Datasets Scaffolds Average Seq Length
234 104 468 425

Family's Representative Sequence

Representative Sequence 3300025910|Ga0207684_10007304|Ga0207684_100073048
Length 454
Sequence MKPGRQRFGPVRTRAGFGAAAIPARACLVLLFALLVVPAVASAAPAPVATIEIEGVISPVTLRLVGIAIDRAQAERAQALVIQLDTPGGLERSMRAIVQRMMNAEVPVVVYVAPTGARAASAGVFITMAAHVAAMAPATNIGAASPVALGGGADKTMMKKVENDAAAFIRTIALERGRNADWAEKAVRDAVAITEREALKLKVIDLIADSVPDLLEKIDGRTIKLPKGTVTLATKGAPVRPIEIGFRDRFLNIITDPNVAYVLMMLGMLGLFFELSNPGVILPGVIGGISLILAFFAFQSLPINYAGLLLILFGIVLLVAEIKIVSHGILAIGGMVSMSLGSLMLFDSPEVGFRVSWWVIAPTVGATAGLFLFVVAAGVRALGRPPATGAEGLVGKTATVRERLGPEGQVMVSGEIWRAVAEGEPLEPGAQVRIVAVDGLTLRVAKAEAKGGVA

Samples

Sample ID Description Type Environment
1 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
3 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
4 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
5 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
6 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
7 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
8 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
9 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
10 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
11 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
12 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
13 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
14 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
15 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
16 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
17 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
18 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
19 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
20 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
21 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
22 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
23 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
24 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
25 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
26 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
27 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
28 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
29 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
31 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
35 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
36 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
37 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
48 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
49 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
52 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
53 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
54 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
55 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
56 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
57 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
58 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
59 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
60 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
61 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
62 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
63 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
64 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
65 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
66 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
67 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
68 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
69 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
70 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
71 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
72 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
73 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
75 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
76 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
78 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
79 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
80 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
81 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
82 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
83 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
84 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
85 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
86 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
87 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
88 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
89 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
90 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
93 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
94 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
95 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
96 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
97 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
98 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
99 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
100 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
101 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
102 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
103 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
104 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 99.57
Stem 0
Stem Tuber 0
Unclassified 1.71

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207684_10007304 3300025910 Bacteria 9965
2 Ga0070669_100244867 3300005353 Bacteria 1426
3 Ga0070705_100026515 3300005440 Bacteria 3155
4 Ga0070705_100159993 3300005440 Bacteria 1504
5 Ga0070694_100016056 3300005444 Bacteria 4714
6 Ga0070694_100066333 3300005444 Bacteria 2476
7 Ga0070694_100133594 3300005444 Bacteria 1795
8 Ga0070708_100003865 3300005445 Bacteria 11752
9 Ga0070708_100010264 3300005445 Bacteria 7582
10 Ga0070708_100032518 3300005445 Bacteria 4526
11 Ga0068867_100079129 3300005459 Bacteria 2474
12 Ga0070706_100014614 3300005467 Bacteria 7255
13 Ga0070706_100023608 3300005467 Bacteria 5662
14 Ga0070706_100038364 3300005467 Bacteria 4420
15 Ga0070706_100044291 3300005467 Bacteria 4110
16 Ga0070706_100045165 3300005467 Bacteria 4070
17 Ga0070707_100005860 3300005468 Bacteria 11457
18 Ga0070707_100039466 3300005468 Bacteria 4512
19 Ga0070698_100008929 3300005471 Bacteria 10783
20 Ga0070699_100097338 3300005518 Bacteria 2578
21 Ga0070699_100097587 3300005518 Bacteria 2574
22 Ga0070699_100134606 3300005518 Bacteria 2180
23 Ga0070697_100004121 3300005536 Bacteria 11138
24 Ga0070697_100035378 3300005536 Bacteria 4028
25 Ga0070672_100022068 3300005543 Bacteria 4669
26 Ga0070695_100088329 3300005545 Bacteria 2064
27 Ga0070696_100043693 3300005546 Bacteria 3101
28 Ga0070696_100046245 3300005546 Bacteria 3017
29 Ga0070696_100065205 3300005546 Bacteria 2553
30 Ga0070693_100130909 3300005547 Bacteria 1568
31 Ga0070704_100009006 3300005549 Bacteria 6018
32 Ga0070704_100165245 3300005549 Bacteria 1754
33 Ga0068859_100249611 3300005617 Bacteria 1865
34 Ga0068860_100183662 3300005843 Bacteria 2022
35 Ga0068860_100260313 3300005843 Bacteria 1691
36 Ga0081455_10000250 3300005937 Bacteria 70308
37 Ga0081455_10027578 3300005937 Bacteria 5204
38 Ga0081538_10000032 3300005981 Bacteria 122398
39 Ga0081539_10000050 3300005985 Bacteria 269342
40 Ga0075428_100000028 3300006844 Bacteria 119875
41 Ga0075428_100001102 3300006844 Bacteria 28759
42 Ga0075428_100003484 3300006844 Bacteria 17225
43 Ga0075428_100028005 3300006844 Bacteria 6233
44 Ga0075428_100066012 3300006844 Bacteria 3963
45 Ga0075428_100147826 3300006844 Bacteria 2554
46 Ga0075428_100163755 3300006844 Bacteria 2413
47 Ga0075430_100000017 3300006846 Bacteria 88487
48 Ga0075430_100000699 3300006846 Bacteria 25570
49 Ga0075430_100080586 3300006846 Bacteria 2727
50 Ga0075430_100144203 3300006846 Bacteria 1983
51 Ga0075431_100000550 3300006847 Bacteria 31550
52 Ga0075431_100001194 3300006847 Bacteria 23447
53 Ga0075431_100001248 3300006847 Bacteria 23109
54 Ga0075431_100001338 3300006847 Bacteria 22530
55 Ga0075431_100002579 3300006847 Bacteria 17508
56 Ga0075431_100004147 3300006847 Bacteria 14152
57 Ga0075431_100012352 3300006847 Bacteria 8618
58 Ga0075431_100014153 3300006847 Bacteria 8066
59 Ga0075431_100102584 3300006847 Bacteria 2952
60 Ga0075433_10003537 3300006852 Bacteria 12061
61 Ga0075433_10040387 3300006852 Bacteria 4038
62 Ga0075434_100030184 3300006871 Bacteria 5337
63 Ga0075434_100122854 3300006871 Bacteria 2612
64 Ga0075434_100270442 3300006871 Bacteria 1719
65 Ga0075429_100000040 3300006880 Bacteria 59305
66 Ga0075429_100069317 3300006880 Bacteria 3071
67 Ga0075436_100047732 3300006914 Bacteria 2954
68 Ga0097620_100249638 3300006931 Bacteria 1865
69 Ga0075435_100045203 3300007076 Bacteria 3529
70 Ga0099794_10026686 3300007265 Bacteria 2673
71 Ga0111539_10022743 3300009094 Bacteria 7699
72 Ga0111539_10104620 3300009094 Bacteria 3321
73 Ga0111539_10144810 3300009094 Bacteria 2782
74 Ga0111539_10264217 3300009094 Bacteria 2003
75 Ga0114129_10000319 3300009147 Bacteria 56353
76 Ga0114129_10004851 3300009147 Bacteria 18985
77 Ga0114129_10006673 3300009147 Bacteria 16393
78 Ga0114129_10010380 3300009147 Bacteria 13281
79 Ga0114129_10012367 3300009147 Bacteria 12150
80 Ga0114129_10021504 3300009147 Bacteria 9157
81 Ga0114129_10151741 3300009147 Bacteria 3171
82 Ga0114129_10156358 3300009147 Bacteria 3117
83 Ga0114129_10301788 3300009147 Bacteria 2134
84 Ga0105249_10054691 3300009553 Bacteria 3650
85 Ga0157369_10016484 3300013105 Bacteria 8310
86 Ga0157372_10173201 3300013307 Unclassified 2497
87 Ga0207684_10002579 3300025910 Bacteria 18172
88 Ga0207684_10032010 3300025910 Bacteria 4473
89 Ga0207684_10035487 3300025910 Bacteria 4235
90 Ga0207684_10106631 3300025910 Bacteria 2397
91 Ga0207646_10003180 3300025922 Bacteria 18782
92 Ga0207646_10010968 3300025922 Bacteria 8798
93 Ga0207646_10256900 3300025922 Bacteria 1579
94 Ga0207709_10056307 3300025935 Bacteria 2433
95 Ga0207670_10070065 3300025936 Bacteria 2421
96 Ga0207691_10084067 3300025940 Bacteria 2857
97 Ga0207689_10002038 3300025942 Bacteria 19075
98 Ga0207708_10126174 3300026075 Bacteria 1997
99 Ga0207641_10044456 3300026088 Bacteria 3736
100 Ga0207648_10054870 3300026089 Bacteria 3479
101 Ga0207648_10077611 3300026089 Bacteria 2896
102 Ga0207675_100204666 3300026118 Bacteria 1897
103 Ga0209588_1024209 3300027671 Bacteria 1916
104 Ga0209971_1004291 3300027682 Bacteria 3385
105 Ga0207428_10002792 3300027907 Bacteria 17341
106 Ga0268265_10143576 3300028380 Bacteria 2002
107 Ga0268264_10250983 3300028381 Bacteria 1644
108 Ga0307511_10000304 3300030521 Bacteria 52160
109 Ga0265316_10056077 3300031344 Bacteria 3080
110 Ga0307408_100064933 3300031548 Bacteria 2675
111 Ga0307409_100176259 3300031995 Bacteria 1887
112 Ga0307416_100002997 3300032002 Bacteria 9855
113 Ga0373931_0007133 3300035691 Bacteria 5257
114 Ga0373931_0039124 3300035691 Bacteria 2484
115 Ga0395900_0004372 3300037418 Bacteria 14989
116 Ga0395900_0127287 3300037418 Bacteria 2612
117 Ga0395898_0004989 3300037466 Bacteria 14392
118 Ga0395905_0095527 3300037471 Bacteria 2790
119 Ga0395905_0139405 3300037471 Unclassified 2282
120 Ga0395901_0007593 3300038443 Bacteria 10952
121 Ga0451577_0108630 3300042876 Bacteria 2480
122 Ga0453683_0011749 3300044673 Bacteria 5767
123 Ga0453683_0079251 3300044673 Bacteria 2057
124 Ga0453684_0017046 3300044712 Bacteria 11281
125 Ga0453684_0029414 3300044712 Bacteria 7800
126 Ga0451576_0031310 3300045051 Bacteria 5674
127 Ga0495580_0000845 3300046472 Bacteria 26536
128 Ga0495669_0027433 3300046684 Bacteria 2491
129 Ga0501031_0000838 3300049568 Bacteria 18506
130 Ga0501031_0002005 3300049568 Bacteria 12843
131 Ga0501031_0037283 3300049568 Bacteria 3172
132 Ga0501034_0075595 3300049571 Bacteria 3375
133 Ga0501034_0179878 3300049571 Bacteria 2080
134 Ga0501036_0102491 3300049572 Bacteria 2421
135 Ga0501037_0146879 3300049573 Unclassified 1686
136 Ga0501038_0078971 3300049574 Bacteria 2776
137 Ga0501039_0000579 3300049575 Bacteria 26468
138 Ga0501039_0003150 3300049575 Bacteria 12343
139 Ga0501040_0041049 3300049576 Bacteria 3150
140 Ga0501040_0063614 3300049576 Bacteria 2539
141 Ga0501040_0135300 3300049576 Bacteria 1735
142 Ga0501041_0017424 3300049577 Bacteria 4275
143 Ga0501041_0043278 3300049577 Bacteria 2737
144 Ga0501042_0001154 3300049578 Bacteria 15274
145 Ga0501042_0008723 3300049578 Bacteria 6724
146 Ga0501042_0031740 3300049578 Bacteria 3738
147 Ga0501042_0130027 3300049578 Bacteria 1815
148 Ga0501046_0006830 3300049580 Bacteria 10067
149 Ga0501046_0015997 3300049580 Bacteria 6293
150 Ga0501048_0006499 3300049582 Bacteria 8885
151 Ga0501070_0021389 3300049586 Bacteria 5426
152 Ga0501071_0063436 3300049587 Bacteria 2679
153 Ga0501071_0140774 3300049587 Bacteria 1796
154 Ga0501072_0004049 3300049588 Bacteria 11101
155 Ga0501072_0008786 3300049588 Bacteria 7671
156 Ga0501072_0083991 3300049588 Bacteria 2524
157 Ga0501072_0105140 3300049588 Bacteria 2245
158 Ga0501073_0090138 3300049589 Unclassified 2131
159 Ga0501074_0140659 3300049590 Bacteria 1726
160 Ga0501075_0005879 3300049591 Bacteria 8390
161 Ga0501075_0013847 3300049591 Bacteria 5768
162 Ga0501075_0105761 3300049591 Bacteria 2139
163 Ga0501075_0138685 3300049591 Bacteria 1853
164 Ga0501076_0036389 3300049592 Bacteria 3857
165 Ga0501076_0219055 3300049592 Bacteria 1556
166 Ga0501077_0002754 3300049593 Bacteria 10538
167 Ga0501077_0032472 3300049593 Bacteria 3323
168 Ga0501079_0087328 3300049741 Bacteria 2414
169 Ga0501079_0251545 3300049741 Bacteria 1381
170 Ga0501080_0036557 3300049742 Bacteria 4584
171 Ga0501080_0059347 3300049742 Bacteria 3560
172 Ga0501080_0096626 3300049742 Bacteria 2743
173 Ga0501081_0007980 3300049743 Bacteria 6869
174 Ga0501081_0012810 3300049743 Bacteria 5514
175 Ga0501081_0040680 3300049743 Bacteria 3182
176 Ga0501083_0062192 3300049744 Bacteria 2491
177 Ga0501035_0016876 3300049822 Bacteria 6732
178 Ga0501035_0036016 3300049822 Bacteria 4488
179 Ga0501035_0114710 3300049822 Bacteria 2359
180 Ga0501044_0108422 3300049823 Bacteria 2787
181 Ga0501045_0003164 3300049824 Bacteria 11248
182 Ga0501045_0025583 3300049824 Bacteria 4245
183 Ga0501045_0040872 3300049824 Bacteria 3373
184 Ga0501045_0047947 3300049824 Bacteria 3113
185 Ga0501045_0084293 3300049824 Bacteria 2345
186 Ga0501045_0145098 3300049824 Bacteria 1765
187 nmdc:mga05p37_11832_c1 3300050507 Bacteria 10401
188 nmdc:mga05p37_196088_c1 3300050507 Bacteria 2449
189 nmdc:mga05p37_255985_c1 3300050507 Bacteria 2098
190 nmdc:mga05p37_33809_c1 3300050507 Bacteria 6263
191 nmdc:mga05p37_5465_c1 3300050507 Bacteria 14919
192 nmdc:mga05p37_6084_c1 3300050507 Bacteria 14210
193 nmdc:mga05p37_7854_c1 3300050507 Bacteria 12595
194 nmdc:mga09592_10269_c1 3300050508 Bacteria 7622
195 nmdc:mga09592_224931_c1 3300050508 Bacteria 1626
196 nmdc:mga09592_227836_c1 3300050508 Bacteria 1615
197 nmdc:mga09592_47606_c1 3300050508 Bacteria 3614
198 nmdc:mga09592_4914_c1 3300050508 Bacteria 10836
199 nmdc:mga09592_49506_c1 3300050508 Bacteria 3543
200 nmdc:mga0qj67_109614_c1 3300050509 Bacteria 2228
201 nmdc:mga0qj67_130357_c1 3300050509 Bacteria 2037
202 nmdc:mga0qj67_257130_c1 3300050509 Bacteria 1417
203 nmdc:mga0qj67_463_c1 3300050509 Bacteria 27779
204 nmdc:mga0qj67_50333_c1 3300050509 Bacteria 3294
205 nmdc:mga0qj67_51203_c1 3300050509 Bacteria 3265
206 nmdc:mga06r32_2536_c1 3300050510 Bacteria 16328
207 nmdc:mga06r32_30281_c1 3300050510 Bacteria 5079
208 nmdc:mga06r32_49029_c1 3300050510 Bacteria 4039
209 nmdc:mga06r32_537_c1 3300050510 Bacteria 32881
210 nmdc:mga06r32_97714_c1 3300050510 Bacteria 2878
211 nmdc:mga08y16_203979_c1 3300050511 Bacteria 2049
212 nmdc:mga08y16_35029_c1 3300050511 Bacteria 5273
213 nmdc:mga0n895_111111_c1 3300050512 Bacteria 2757
214 nmdc:mga0n895_409_c1 3300050512 Bacteria 28758
215 nmdc:mga0n895_87881_c1 3300050512 Bacteria 3107
216 nmdc:mga0rr50_20273_c1 3300050513 Bacteria 4510
217 nmdc:mga0rr50_42189_c1 3300050513 Bacteria 3330
218 nmdc:mga0rr50_66430_c1 3300050513 Bacteria 2736
219 nmdc:mga08x19_1457_c1 3300050514 Bacteria 14645
220 nmdc:mga0a205_125732_c1 3300050515 Bacteria 2463
221 nmdc:mga0a205_153749_c1 3300050515 Bacteria 2199
222 nmdc:mga0a205_2496_c1 3300050515 Bacteria 16218
223 nmdc:mga0a205_33687_c1 3300050515 Bacteria 4912
224 nmdc:mga0a205_71226_c2 3300050515 Bacteria 2087
225 Ga0501084_0006526 3300054114 Bacteria 9585
226 Ga0501084_0023646 3300054114 Bacteria 5124
227 Ga0501084_0045252 3300054114 Bacteria 3685
228 Ga0501084_0054069 3300054114 Bacteria 3358
229 Ga0501084_0059121 3300054114 Bacteria 3208
230 Ga0501082_0016528 3300060353 Bacteria 6352
231 Ga0501082_0090994 3300060353 Bacteria 2634
232 Ga0530510_0066706 3300061734 Bacteria 2610
233 Ga0530510_0068553 3300061734 Bacteria 2573
234 Ga0530510_0119100 3300061734 Bacteria 1937
235 Ga0207684_10007304
236 Ga0070669_100244867
237 Ga0070705_100026515
238 Ga0070705_100159993
239 Ga0070694_100016056
240 Ga0070694_100066333
241 Ga0070694_100133594
242 Ga0070708_100003865
243 Ga0070708_100010264
244 Ga0070708_100032518
245 Ga0068867_100079129
246 Ga0070706_100014614
247 Ga0070706_100023608
248 Ga0070706_100038364
249 Ga0070706_100044291
250 Ga0070706_100045165
251 Ga0070707_100005860
252 Ga0070707_100039466
253 Ga0070698_100008929
254 Ga0070699_100097338
255 Ga0070699_100097587
256 Ga0070699_100134606
257 Ga0070697_100004121
258 Ga0070697_100035378
259 Ga0070672_100022068
260 Ga0070695_100088329
261 Ga0070696_100043693
262 Ga0070696_100046245
263 Ga0070696_100065205
264 Ga0070693_100130909
265 Ga0070704_100009006
266 Ga0070704_100165245
267 Ga0068859_100249611
268 Ga0068860_100183662
269 Ga0068860_100260313
270 Ga0081455_10000250
271 Ga0081455_10027578
272 Ga0081538_10000032
273 Ga0081539_10000050
274 Ga0075428_100000028
275 Ga0075428_100001102
276 Ga0075428_100003484
277 Ga0075428_100028005
278 Ga0075428_100066012
279 Ga0075428_100147826
280 Ga0075428_100163755
281 Ga0075430_100000017
282 Ga0075430_100000699
283 Ga0075430_100080586
284 Ga0075430_100144203
285 Ga0075431_100000550
286 Ga0075431_100001194
287 Ga0075431_100001248
288 Ga0075431_100001338
289 Ga0075431_100002579
290 Ga0075431_100004147
291 Ga0075431_100012352
292 Ga0075431_100014153
293 Ga0075431_100102584
294 Ga0075433_10003537
295 Ga0075433_10040387
296 Ga0075434_100030184
297 Ga0075434_100122854
298 Ga0075434_100270442
299 Ga0075429_100000040
300 Ga0075429_100069317
301 Ga0075436_100047732
302 Ga0097620_100249638
303 Ga0075435_100045203
304 Ga0099794_10026686
305 Ga0111539_10022743
306 Ga0111539_10104620
307 Ga0111539_10144810
308 Ga0111539_10264217
309 Ga0114129_10000319
310 Ga0114129_10004851
311 Ga0114129_10006673
312 Ga0114129_10010380
313 Ga0114129_10012367
314 Ga0114129_10021504
315 Ga0114129_10151741
316 Ga0114129_10156358
317 Ga0114129_10301788
318 Ga0105249_10054691
319 Ga0157369_10016484
320 Ga0157372_10173201
321 Ga0207684_10002579
322 Ga0207684_10032010
323 Ga0207684_10035487
324 Ga0207684_10106631
325 Ga0207646_10003180
326 Ga0207646_10010968
327 Ga0207646_10256900
328 Ga0207709_10056307
329 Ga0207670_10070065
330 Ga0207691_10084067
331 Ga0207689_10002038
332 Ga0207708_10126174
333 Ga0207641_10044456
334 Ga0207648_10054870
335 Ga0207648_10077611
336 Ga0207675_100204666
337 Ga0209588_1024209
338 Ga0209971_1004291
339 Ga0207428_10002792
340 Ga0268265_10143576
341 Ga0268264_10250983
342 Ga0307511_10000304
343 Ga0265316_10056077
344 Ga0307408_100064933
345 Ga0307409_100176259
346 Ga0307416_100002997
347 Ga0373931_0007133
348 Ga0373931_0039124
349 Ga0395900_0004372
350 Ga0395900_0127287
351 Ga0395898_0004989
352 Ga0395905_0095527
353 Ga0395905_0139405
354 Ga0395901_0007593
355 Ga0451577_0108630
356 Ga0453683_0011749
357 Ga0453683_0079251
358 Ga0453684_0017046
359 Ga0453684_0029414
360 Ga0451576_0031310
361 Ga0495580_0000845
362 Ga0495669_0027433
363 Ga0501031_0000838
364 Ga0501031_0002005
365 Ga0501031_0037283
366 Ga0501034_0075595
367 Ga0501034_0179878
368 Ga0501036_0102491
369 Ga0501037_0146879
370 Ga0501038_0078971
371 Ga0501039_0000579
372 Ga0501039_0003150
373 Ga0501040_0041049
374 Ga0501040_0063614
375 Ga0501040_0135300
376 Ga0501041_0017424
377 Ga0501041_0043278
378 Ga0501042_0001154
379 Ga0501042_0008723
380 Ga0501042_0031740
381 Ga0501042_0130027
382 Ga0501046_0006830
383 Ga0501046_0015997
384 Ga0501048_0006499
385 Ga0501070_0021389
386 Ga0501071_0063436
387 Ga0501071_0140774
388 Ga0501072_0004049
389 Ga0501072_0008786
390 Ga0501072_0083991
391 Ga0501072_0105140
392 Ga0501073_0090138
393 Ga0501074_0140659
394 Ga0501075_0005879
395 Ga0501075_0013847
396 Ga0501075_0105761
397 Ga0501075_0138685
398 Ga0501076_0036389
399 Ga0501076_0219055
400 Ga0501077_0002754
401 Ga0501077_0032472
402 Ga0501079_0087328
403 Ga0501079_0251545
404 Ga0501080_0036557
405 Ga0501080_0059347
406 Ga0501080_0096626
407 Ga0501081_0007980
408 Ga0501081_0012810
409 Ga0501081_0040680
410 Ga0501083_0062192
411 Ga0501035_0016876
412 Ga0501035_0036016
413 Ga0501035_0114710
414 Ga0501044_0108422
415 Ga0501045_0003164
416 Ga0501045_0025583
417 Ga0501045_0040872
418 Ga0501045_0047947
419 Ga0501045_0084293
420 Ga0501045_0145098
421 nmdc:mga05p37_11832_c1
422 nmdc:mga05p37_196088_c1
423 nmdc:mga05p37_255985_c1
424 nmdc:mga05p37_33809_c1
425 nmdc:mga05p37_5465_c1
426 nmdc:mga05p37_6084_c1
427 nmdc:mga05p37_7854_c1
428 nmdc:mga09592_10269_c1
429 nmdc:mga09592_224931_c1
430 nmdc:mga09592_227836_c1
431 nmdc:mga09592_47606_c1
432 nmdc:mga09592_4914_c1
433 nmdc:mga09592_49506_c1
434 nmdc:mga0qj67_109614_c1
435 nmdc:mga0qj67_130357_c1
436 nmdc:mga0qj67_257130_c1
437 nmdc:mga0qj67_463_c1
438 nmdc:mga0qj67_50333_c1
439 nmdc:mga0qj67_51203_c1
440 nmdc:mga06r32_2536_c1
441 nmdc:mga06r32_30281_c1
442 nmdc:mga06r32_49029_c1
443 nmdc:mga06r32_537_c1
444 nmdc:mga06r32_97714_c1
445 nmdc:mga08y16_203979_c1
446 nmdc:mga08y16_35029_c1
447 nmdc:mga0n895_111111_c1
448 nmdc:mga0n895_409_c1
449 nmdc:mga0n895_87881_c1
450 nmdc:mga0rr50_20273_c1
451 nmdc:mga0rr50_42189_c1
452 nmdc:mga0rr50_66430_c1
453 nmdc:mga08x19_1457_c1
454 nmdc:mga0a205_125732_c1
455 nmdc:mga0a205_153749_c1
456 nmdc:mga0a205_2496_c1
457 nmdc:mga0a205_33687_c1
458 nmdc:mga0a205_71226_c2
459 Ga0501084_0006526
460 Ga0501084_0023646
461 Ga0501084_0045252
462 Ga0501084_0054069
463 Ga0501084_0059121
464 Ga0501082_0016528
465 Ga0501082_0090994
466 Ga0530510_0066706
467 Ga0530510_0068553
468 Ga0530510_0119100

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01957

NfeD

NfeD-like C-terminal, partner-binding

363

446

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
3wwv-assembly1.cif.gz_A-2 c-terminal domain of stomatin operon partner protein 1510-c from pyrococcus horikoshii 0.9503 355 416
3cp0-assembly1.cif.gz_A crystal structure of the soluble domain of membrane protein implicated in regulation of membrane protease activity from corynebacterium glutamicum 0.9324 358 413
3viv-assembly1.cif.gz_B 1510-n membrane-bound stomatin-specific protease k138a mutant in complex with a substrate peptide 0.9215 15 222
2deo-assembly1.cif.gz_A 1510-n membrane protease specific for a stomatin homolog from pyrococcus horikoshii 0.9197 15 223
6m4b-assembly1.cif.gz_B 1510-n membrane-bound stomatin-specific protease s97a mutant 0.9188 15 212
ID Description Score Start End Superfamily
af_Q2FXZ8_166_227_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9851 360 414 2.40.50.140
af_P71767_83_144_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9592 359 413 2.40.50.140
3wwvA00 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9503 355 416 2.40.50.140
3vivB00 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9215 15 222 3.90.226.10
3wwvA00 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9081 355 416 2.40.50.140
ID Description Score Start End GO Terms
AF-A0A7C5I133-F1-model_v4 Nodulation protein NfeD 0.9902 14 106
AF-A0A3C0TQ82-F1-model_v4 Nodulation protein NfeD 0.9795 14 209
AF-A0A3C0B563-F1-model_v4 Serine protease 0.978 357 414 GO:0005886
GO:0006508
GO:0008233
AF-A0A3D0DG96-F1-model_v4 Serine protease 0.9761 15 187 GO:0006508
GO:0008233
AF-X1HU87-F1-model_v4 Peptidase S49 domain-containing protein 0.9731 15 93 GO:0005886

Map