F346982

General Info

Members Datasets Scaffolds Average Seq Length
234 161 228 269

Family's Representative Sequence

Representative Sequence 3300006844|Ga0075428_100473953|Ga0075428_1004739532
Length 323
Sequence MRARDASAHDNSSLGHPSGAGLAPGSRSALVPTGEQIDVQDREVCMENSTGQLAVVTGASSGIGFELAKLFAEHGYDLVIVAEDSRINSAAETLRSLGPIVESVQADLATREGVERLWQRVQRTGRPVDAIAINAGVGVGGPFVDNDLEDEINLINLNVTGAVHLAKHAVRQMSECGEGRILITSSIAAEMPAPFEAVYGASKAFLLSFAEALRNELKDTRITVTALQPGPTDTNFFARAGMLDTKVGADKKDDPADVARDGFEALMAGKDHVVAGSFKNKVQSTMAQVTPDKVTAEMHRKLSEPGSASKVRDRGREANAENR

Samples

Sample ID Description Type Environment
1 2857740372 Paenarthrobacter sp. R-74611 Isolate Unclassified
2 2886627955 Nostoc sp. PA-18-2419 JC1668 Isolate Unclassified
3 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
4 2910809715 Paenarthrobacter sp. CM16 Isolate Unclassified
5 2913912277 Desmonostoc muscorum LEGE 12446 Isolate Unclassified
6 2919450847 Ancylobacter sp. 3268 Isolate Rhizosphere
7 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
8 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
9 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
10 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
11 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
12 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
13 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
14 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
15 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
16 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
17 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
21 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
22 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
44 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
45 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
46 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
47 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
48 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
49 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
54 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
55 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
56 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
57 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
58 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
59 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
84 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
85 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
86 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
87 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
88 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
89 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
90 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
91 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
92 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
93 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
94 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
95 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
96 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
97 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
98 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
99 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
100 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
101 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
102 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
103 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
104 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
105 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
106 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
107 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
108 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
109 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
110 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
111 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
112 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
113 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
114 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
115 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
116 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
117 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
118 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
119 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
120 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
121 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
135 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
136 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
137 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
138 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
139 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
140 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
141 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
142 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
143 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
144 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
145 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
146 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
148 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
149 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
150 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
151 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
152 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
153 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
154 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
155 3300059490 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 7R_CD_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
156 3300059492 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 14R_AD_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
157 3300059509 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 54R_CD_T2_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
158 3300059655 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 152R_CD_T3_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
159 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
160 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
161 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.44
Metatranscriptomes 2.99
Isolates 2.56

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.28
Nodule 0
Rhizoplane 2.14
Rhizosphere 91.03
Stem 0
Stem Tuber 0
Unclassified 5.56

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10002067 3300003203 Bacteria 9479
2 rootH2_10001535 3300003320 Bacteria 91957
3 rootL2_10270722 3300003322 Bacteria 4589
4 rootH1_10155792 3300003323 Bacteria 6492
5 Ga0058862_11173718 3300004803 Bacteria 1241
6 Ga0070658_10159928 3300005327 Bacteria 1889
7 Ga0070683_100083705 3300005329 Bacteria 2988
8 Ga0070683_100138152 3300005329 Bacteria 2308
9 Ga0070683_100341890 3300005329 Bacteria 1425
10 Ga0070670_100296784 3300005331 Bacteria 1413
11 Ga0070680_100053386 3300005336 Bacteria 3299
12 Ga0070660_100079887 3300005339 Unclassified 2566
13 Ga0070660_100432033 3300005339 Bacteria 1091
14 Ga0070660_100454011 3300005339 Bacteria 1063
15 Ga0070692_10117957 3300005345 Bacteria 1476
16 Ga0070671_100089173 3300005355 Bacteria 2582
17 Ga0070659_100016723 3300005366 Bacteria 5511
18 Ga0070659_100079773 3300005366 Bacteria 2613
19 Ga0070709_10021688 3300005434 Bacteria 3745
20 Ga0070714_100036329 3300005435 Bacteria 4131
21 Ga0070714_100308145 3300005435 Bacteria 1478
22 Ga0070713_100051826 3300005436 Bacteria 3396
23 Ga0070662_100119383 3300005457 Bacteria 2019
24 Ga0070681_10011998 3300005458 Bacteria 8590
25 Ga0070679_100084905 3300005530 Bacteria 3153
26 Ga0070684_100007585 3300005535 Bacteria 8451
27 Ga0070684_100044781 3300005535 Unclassified 3829
28 Ga0068853_100040607 3300005539 Bacteria 3970
29 Ga0068853_100210590 3300005539 Bacteria 1772
30 Ga0070665_100382011 3300005548 Bacteria 1416
31 Ga0070665_100531061 3300005548 Unclassified 1188
32 Ga0068855_100052601 3300005563 Bacteria 4794
33 Ga0068855_100429122 3300005563 Bacteria 1445
34 Ga0070664_100022882 3300005564 Bacteria 5155
35 Ga0068857_100032787 3300005577 Bacteria 4592
36 Ga0068856_100000875 3300005614 Bacteria 32269
37 Ga0068852_100002836 3300005616 Bacteria 12019
38 Ga0068864_100043131 3300005618 Bacteria 3862
39 Ga0081538_10031337 3300005981 Bacteria 3588
40 Ga0081539_10000482 3300005985 Bacteria 84124
41 Ga0097621_100456974 3300006237 Unclassified 1151
42 Ga0075428_100473953 3300006844 Bacteria 1340
43 Ga0075433_10043845 3300006852 Bacteria 3884
44 Ga0105240_10356434 3300009093 Bacteria 1658
45 Ga0105245_10125404 3300009098 Bacteria 2403
46 Ga0114129_10010860 3300009147 Bacteria 12974
47 Ga0114129_10045539 3300009147 Bacteria 6167
48 Ga0105242_10001238 3300009176 Bacteria 20130
49 Ga0105248_10191924 3300009177 Unclassified 2302
50 Ga0105248_10267283 3300009177 Bacteria 1925
51 Ga0105237_10026601 3300009545 Bacteria 5914
52 Ga0105237_10066508 3300009545 Bacteria 3599
53 Ga0105238_10004193 3300009551 Bacteria 14309
54 Ga0105239_10254328 3300010375 Bacteria 1973
55 Ga0105246_10021990 3300011119 Bacteria 4112
56 Ga0157370_10010772 3300013104 Bacteria 9613
57 Ga0157369_10029965 3300013105 Bacteria 6006
58 Ga0157374_10087847 3300013296 Bacteria 2960
59 Ga0157372_10036672 3300013307 Bacteria 5405
60 Ga0157372_10066723 3300013307 Bacteria 4043
61 Ga0163163_10019658 3300014325 Bacteria 6346
62 Ga0163163_10167726 3300014325 Bacteria 2242
63 Ga0157376_10185468 3300014969 Unclassified 1904
64 Ga0206354_10866314 3300020081 Bacteria 1670
65 Ga0213876_10014147 3300021384 Plasmid 4232
66 Ga0213875_10000797 3300021388 Bacteria 23563
67 Ga0213875_10094945 3300021388 Bacteria 1391
68 Ga0224712_10004226 3300022467 Bacteria 3848
69 Ga0207680_10136550 3300025903 Unclassified 1622
70 Ga0207699_10217215 3300025906 Unclassified 1303
71 Ga0207707_10272597 3300025912 Bacteria 1466
72 Ga0207671_10037293 3300025914 Bacteria 3605
73 Ga0207657_10022308 3300025919 Bacteria 5929
74 Ga0207657_10380841 3300025919 Bacteria 1111
75 Ga0207649_10169554 3300025920 Bacteria 1519
76 Ga0207652_10030451 3300025921 Bacteria 4519
77 Ga0207694_10063203 3300025924 Bacteria 2884
78 Ga0207650_10178562 3300025925 Bacteria 1691
79 Ga0207664_10015362 3300025929 Bacteria 5553
80 Ga0207644_10057444 3300025931 Bacteria 2810
81 Ga0207644_10105814 3300025931 Bacteria 2120
82 Ga0207690_10045859 3300025932 Bacteria 2891
83 Ga0207690_10200737 3300025932 Bacteria 1514
84 Ga0207706_10100956 3300025933 Bacteria 2538
85 Ga0207686_10003352 3300025934 Bacteria 8601
86 Ga0207669_10105917 3300025937 Bacteria 1872
87 Ga0207661_10050043 3300025944 Bacteria 3327
88 Ga0207679_10084132 3300025945 Bacteria 2441
89 Ga0207667_10082512 3300025949 Bacteria 3330
90 Ga0207639_10024863 3300026041 Bacteria 4339
91 Ga0207702_10001397 3300026078 Bacteria 24081
92 Ga0207648_10566462 3300026089 Unclassified 1045
93 Ga0207674_10017403 3300026116 Bacteria 7844
94 Ga0207674_10106298 3300026116 Bacteria 2784
95 Ga0207698_10121569 3300026142 Bacteria 2211
96 Ga0207698_10216922 3300026142 Bacteria 1726
97 Ga0268266_10048214 3300028379 Bacteria 3651
98 Ga0268266_10368520 3300028379 Unclassified 1353
99 Ga0307405_10170684 3300031731 Bacteria 1551
100 Ga0307405_10331894 3300031731 Bacteria 1166
101 Ga0307413_10038791 3300031824 Bacteria 2764
102 Ga0307413_10056524 3300031824 Bacteria 2394
103 Ga0307413_10319887 3300031824 Bacteria 1185
104 Ga0307410_10089448 3300031852 Bacteria 2182
105 Ga0307410_10136398 3300031852 Bacteria 1809
106 Ga0307410_10262672 3300031852 Bacteria 1347
107 Ga0307410_10323461 3300031852 Bacteria 1224
108 Ga0307406_10084005 3300031901 Bacteria 2125
109 Ga0307406_10255133 3300031901 Bacteria 1323
110 Ga0307406_10393325 3300031901 Bacteria 1096
111 Ga0307407_10086933 3300031903 Bacteria 1906
112 Ga0307407_10118019 3300031903 Bacteria 1677
113 Ga0307409_100084139 3300031995 Bacteria 2582
114 Ga0307409_100089081 3300031995 Bacteria 2521
115 Ga0307409_100116229 3300031995 Bacteria 2254
116 Ga0307409_100423510 3300031995 Bacteria 1278
117 Ga0307416_100061343 3300032002 Bacteria 3068
118 Ga0307416_100160673 3300032002 Bacteria 2076
119 Ga0307416_100252648 3300032002 Bacteria 1717
120 Ga0307416_100855331 3300032002 Bacteria 1008
121 Ga0307414_10027818 3300032004 Bacteria 3659
122 Ga0307414_10131129 3300032004 Bacteria 1946
123 Ga0307411_10028752 3300032005 Bacteria 3385
124 Ga0307415_100392348 3300032126 Bacteria 1182
125 Ga0373937_0348461 3300036401 Bacteria 1403
126 Ga0373925_0005399 3300037068 Bacteria 9530
127 Ga0395900_0006000 3300037418 Bacteria 12681
128 Ga0395900_0391378 3300037418 Bacteria 1356
129 Ga0395898_0062651 3300037466 Bacteria 3612
130 Ga0395905_0118639 3300037471 Bacteria 2487
131 Ga0436364_0080238 3300037853 Bacteria 106053
132 Ga0436364_1504697 3300037853 Bacteria 1758
133 Ga0436365_0501122 3300039437 Bacteria 24603
134 Ga0439452_011744 3300042010 Bacteria 2509
135 Ga0439462_0031064 3300042015 Bacteria 1414
136 Ga0466969_0007394 3300044656 Bacteria 5839
137 Ga0466969_0021506 3300044656 Bacteria 3335
138 Ga0466972_0000002 3300044658 Bacteria 408005
139 Ga0466965_0154989 3300044683 Bacteria 1199
140 Ga0466966_0008826 3300044684 Bacteria 6674
141 Ga0466961_0023712 3300044693 Bacteria 3948
142 Ga0466963_0021425 3300044694 Bacteria 4077
143 Ga0466963_0171849 3300044694 Bacteria 1511
144 Ga0466971_0031885 3300044719 Bacteria 2360
145 Ga0466968_0014225 3300044735 Bacteria 3142
146 Ga0466970_0000620 3300044765 Bacteria 17414
147 Ga0466957_0021049 3300044842 Bacteria 3840
148 Ga0466957_0045216 3300044842 Bacteria 2670
149 Ga0466957_0068655 3300044842 Bacteria 2189
150 Ga0466960_0009323 3300044901 Bacteria 4041
151 Ga0466960_0039679 3300044901 Bacteria 2222
152 Ga0466959_0023664 3300045049 Bacteria 4546
153 Ga0466958_0015181 3300045836 Bacteria 4409
154 Ga0466958_0062850 3300045836 Bacteria 2264
155 Ga0466967_0005513 3300045976 Bacteria 8781
156 Ga0466967_0028894 3300045976 Bacteria 4635
157 Ga0466967_0054539 3300045976 Bacteria 3518
158 Ga0466967_0142445 3300045976 Bacteria 2234
159 Ga0466967_0236022 3300045976 Unclassified 1743
160 Ga0495625_0022509 3300046660 Bacteria 4831
161 Ga0496109_0402126 3300048912 Bacteria 1294
162 Ga0496110_0172030 3300048913 Bacteria 1965
163 Ga0496112_0105113 3300048915 Bacteria 2793
164 Ga0496113_0021492 3300048916 Bacteria 4553
165 Ga0496113_0273053 3300048916 Bacteria 1351
166 Ga0501031_0053097 3300049568 Bacteria 2640
167 Ga0501032_0000831 3300049569 Bacteria 25090
168 Ga0501032_0121543 3300049569 Bacteria 1726
169 Ga0501033_0009986 3300049570 Bacteria 7289
170 Ga0501033_0011013 3300049570 Bacteria 6926
171 Ga0501034_0125723 3300049571 Bacteria 2549
172 Ga0501036_0013254 3300049572 Bacteria 6843
173 Ga0501036_0099123 3300049572 Bacteria 2464
174 Ga0501036_0283509 3300049572 Bacteria 1386
175 Ga0501037_0042262 3300049573 Bacteria 3350
176 Ga0501037_0193094 3300049573 Bacteria 1441
177 Ga0501038_0204142 3300049574 Bacteria 1585
178 Ga0501039_0035195 3300049575 Bacteria 3864
179 Ga0501039_0148602 3300049575 Bacteria 1841
180 Ga0501040_0038543 3300049576 Bacteria 3249
181 Ga0501041_0005791 3300049577 Bacteria 7222
182 Ga0501041_0069830 3300049577 Bacteria 2156
183 Ga0501042_0031210 3300049578 Bacteria 3770
184 Ga0501042_0085967 3300049578 Bacteria 2255
185 Ga0501043_0004750 3300049579 Bacteria 11019
186 Ga0501043_0054480 3300049579 Bacteria 3140
187 Ga0501043_0086894 3300049579 Bacteria 2457
188 Ga0501043_0303627 3300049579 Bacteria 1219
189 Ga0501046_0079648 3300049580 Bacteria 2532
190 Ga0501067_0004550 3300049583 Bacteria 7667
191 Ga0501071_0009808 3300049587 Bacteria 6393
192 Ga0501072_0031750 3300049588 Bacteria 4136
193 Ga0501073_0012316 3300049589 Bacteria 6239
194 Ga0501073_0139373 3300049589 Bacteria 1681
195 Ga0501074_0080356 3300049590 Bacteria 2339
196 Ga0501074_0249757 3300049590 Bacteria 1261
197 Ga0501075_0006286 3300049591 Bacteria 8163
198 Ga0501076_0003869 3300049592 Bacteria 10546
199 Ga0501076_0093235 3300049592 Bacteria 2423
200 Ga0501077_0004001 3300049593 Bacteria 8893
201 Ga0501249_002310 3300049679 Bacteria 3854
202 Ga0501079_0041475 3300049741 Bacteria 3553
203 Ga0501080_0005223 3300049742 Bacteria 11566
204 Ga0501080_0025364 3300049742 Bacteria 5501
205 Ga0501080_0077583 3300049742 Bacteria 3090
206 Ga0501080_0156612 3300049742 Bacteria 2104
207 Ga0501241_019663 3300049758 Unclassified 1241
208 Ga0501044_0036093 3300049823 Bacteria 5173
209 Ga0501045_0026474 3300049824 Bacteria 4172
210 nmdc:mga05p37_335020_c1 3300050507 Bacteria 1786
211 nmdc:mga09592_165974_c1 3300050508 Bacteria 1908
212 Ga0500616_0002430 3300053153 Bacteria 15509
213 Ga0500616_0110916 3300053153 Bacteria 1325
214 Ga0500645_046040 3300053730 Bacteria 1280
215 Ga0501084_0019440 3300054114 Bacteria 5659
216 Ga0590071_003471 3300059421 Bacteria 3869
217 Ga0590075_001939 3300059424 Bacteria 5006
218 Ga0590075_030101 3300059424 Bacteria 1374
219 Ga0587066_002805 3300059490 Bacteria 1972
220 Ga0587073_0001631 3300059492 Bacteria 2680
221 Ga0587089_011148 3300059509 Bacteria 1129
222 Ga0587114_003367 3300059655 Bacteria 1584
223 Ga0501082_0051062 3300060353 Bacteria 3564
224 Ga0501082_0371756 3300060353 Bacteria 1247
225 Ga0501082_0580346 3300060353 Bacteria 981
226 Ga0466962_0101199 3300061719 Bacteria 1383
227 Ga0530510_0063254 3300061734 Bacteria 2679
228 Ga0530510_0088790 3300061734 Bacteria 2254

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300037068 Ga0373925_0005399 Ga0373925_0005399_3067_3753 222
2 3300053153 Ga0500616_0110916 Ga0500616_0110916_608_1297 228
3 3300037418 Ga0395900_0006000 Ga0395900_0006000_6933_7757 246
4 3300031995 Ga0307409_100089081 Ga0307409_1000890813 254
5 3300032004 Ga0307414_10027818 Ga0307414_100278184 254
6 3300031731 Ga0307405_10170684 Ga0307405_101706842 255
7 3300009147 Ga0114129_10045539 Ga0114129_100455397 257
8 3300053730 Ga0500645_046040 Ga0500645_046040_386_1168 259
9 iso_pu_bacteria 2919450847 2919456065 259
10 3300013296 Ga0157374_10087847 Ga0157374_100878471 260
11 iso_pu_bacteria 2857740372 2857743171 260
12 iso_pu_bacteria 2886627955 2886634550 260
13 iso_pu_bacteria 2904497146 2904497170 260
14 iso_pu_bacteria 2910809715 2910813885 260
15 iso_pu_bacteria 2913912277 2913915336 260
16 3300003320 rootH2_10001535 rootH2_1000153541 261
17 3300037418 Ga0395900_0391378 Ga0395900_0391378_285_1082 261
18 3300049577 Ga0501041_0069830 Ga0501041_0069830_1057_1848 261
19 3300049592 Ga0501076_0093235 Ga0501076_0093235_1435_2226 261
20 3300049679 Ga0501249_002310 Ga0501249_002310_1706_2554 261
21 3300049742 Ga0501080_0077583 Ga0501080_0077583_416_1207 261
22 3300053153 Ga0500616_0002430 Ga0500616_0002430_12910_13704 261
23 3300060353 Ga0501082_0371756 Ga0501082_0371756_417_1208 261
24 3300060353 Ga0501082_0580346 Ga0501082_0580346_24_818 261
25 3300061734 Ga0530510_0088790 Ga0530510_0088790_202_993 261
26 3300003323 rootH1_10155792 rootH1_101557924 262
27 3300005457 Ga0070662_100119383 Ga0070662_1001193833 262
28 3300021388 Ga0213875_10000797 Ga0213875_1000079716 262
29 3300037853 Ga0436364_0080238 Ga0436364_0080238_7918_8706 262
30 3300044683 Ga0466965_0154989 Ga0466965_0154989_98_892 262
31 3300045976 Ga0466967_0054539 Ga0466967_0054539_496_1290 262
32 3300046660 Ga0495625_0022509 Ga0495625_0022509_1837_2661 262
33 3300005329 Ga0070683_100138152 Ga0070683_1001381522 263
34 3300005436 Ga0070713_100051826 Ga0070713_1000518264 263
35 3300005535 Ga0070684_100044781 Ga0070684_1000447815 263
36 3300006237 Ga0097621_100456974 Ga0097621_1004569742 263
37 3300009177 Ga0105248_10267283 Ga0105248_102672832 263
38 3300010375 Ga0105239_10254328 Ga0105239_102543282 263
39 3300014325 Ga0163163_10019658 Ga0163163_100196585 263
40 3300021384 Ga0213876_10014147 Ga0213876_100141474 263
41 3300026116 Ga0207674_10106298 Ga0207674_101062983 263
42 3300031901 Ga0307406_10255133 Ga0307406_102551332 263
43 3300031995 Ga0307409_100116229 Ga0307409_1001162292 263
44 3300039437 Ga0436365_0501122 Ga0436365_0501122_21852_22646 263
45 3300048916 Ga0496113_0273053 Ga0496113_0273053_187_990 263
46 3300049742 Ga0501080_0025364 Ga0501080_0025364_2634_3425 263
47 3300059490 Ga0587066_002805 Ga0587066_002805_660_1463 263
48 3300059492 Ga0587073_0001631 Ga0587073_0001631_902_1705 263
49 3300059509 Ga0587089_011148 Ga0587089_011148_297_1100 263
50 3300003322 rootL2_10270722 rootL2_102707222 264
51 3300005345 Ga0070692_10117957 Ga0070692_101179571 264
52 3300005355 Ga0070671_100089173 Ga0070671_1000891732 264
53 3300005434 Ga0070709_10021688 Ga0070709_100216882 264
54 3300005435 Ga0070714_100308145 Ga0070714_1003081451 264
55 3300005548 Ga0070665_100382011 Ga0070665_1003820112 264
56 3300005563 Ga0068855_100429122 Ga0068855_1004291222 264
57 3300005614 Ga0068856_100000875 Ga0068856_10000087516 264
58 3300006844 Ga0075428_100473953 Ga0075428_1004739532 264
59 3300006852 Ga0075433_10043845 Ga0075433_100438453 264
60 3300009147 Ga0114129_10010860 Ga0114129_100108605 264
61 3300025906 Ga0207699_10217215 Ga0207699_102172151 264
62 3300025931 Ga0207644_10105814 Ga0207644_101058142 264
63 3300026078 Ga0207702_10001397 Ga0207702_100013978 264
64 3300026142 Ga0207698_10216922 Ga0207698_102169222 264
65 3300028379 Ga0268266_10048214 Ga0268266_100482142 264
66 3300028379 Ga0268266_10368520 Ga0268266_103685202 264
67 3300031824 Ga0307413_10038791 Ga0307413_100387912 264
68 3300031824 Ga0307413_10056524 Ga0307413_100565243 264
69 3300031824 Ga0307413_10319887 Ga0307413_103198871 264
70 3300031903 Ga0307407_10086933 Ga0307407_100869332 264
71 3300031903 Ga0307407_10118019 Ga0307407_101180192 264
72 3300031995 Ga0307409_100084139 Ga0307409_1000841393 264
73 3300032002 Ga0307416_100061343 Ga0307416_1000613434 264
74 3300032002 Ga0307416_100252648 Ga0307416_1002526482 264
75 3300032002 Ga0307416_100855331 Ga0307416_1008553311 264
76 3300036401 Ga0373937_0348461 Ga0373937_0348461_174_1031 264
77 3300044658 Ga0466972_0000002 Ga0466972_0000002_286972_287874 264
78 3300044694 Ga0466963_0171849 Ga0466963_0171849_161_967 264
79 3300044765 Ga0466970_0000620 Ga0466970_0000620_9178_10080 264
80 3300044842 Ga0466957_0045216 Ga0466957_0045216_413_1219 264
81 3300045836 Ga0466958_0062850 Ga0466958_0062850_739_1536 264
82 3300045976 Ga0466967_0028894 Ga0466967_0028894_1879_2682 264
83 3300045976 Ga0466967_0236022 Ga0466967_0236022_786_1589 264
84 3300048913 Ga0496110_0172030 Ga0496110_0172030_331_1134 264
85 3300049569 Ga0501032_0000831 Ga0501032_0000831_604_1401 264
86 3300049574 Ga0501038_0204142 Ga0501038_0204142_725_1522 264
87 3300049579 Ga0501043_0004750 Ga0501043_0004750_5771_6568 264
88 3300049758 Ga0501241_019663 Ga0501241_019663_52_906 264
89 3300050507 nmdc:mga05p37_335020_c1 nmdc:mga05p37_335020_c1_47_1018 264
90 3300050508 nmdc:mga09592_165974_c1 nmdc:mga09592_165974_c1_979_1860 264
91 3300059655 Ga0587114_003367 Ga0587114_003367_35_841 264
92 3300003203 JGI25406J46586_10002067 JGI25406J46586_100020675 265
93 3300004803 Ga0058862_11173718 Ga0058862_111737182 265
94 3300005327 Ga0070658_10159928 Ga0070658_101599282 265
95 3300005329 Ga0070683_100083705 Ga0070683_1000837051 265
96 3300005329 Ga0070683_100341890 Ga0070683_1003418902 265
97 3300005331 Ga0070670_100296784 Ga0070670_1002967842 265
98 3300005336 Ga0070680_100053386 Ga0070680_1000533862 265
99 3300005339 Ga0070660_100079887 Ga0070660_1000798874 265
100 3300005339 Ga0070660_100432033 Ga0070660_1004320331 265
101 3300005339 Ga0070660_100454011 Ga0070660_1004540111 265
102 3300005366 Ga0070659_100016723 Ga0070659_1000167234 265
103 3300005366 Ga0070659_100079773 Ga0070659_1000797732 265
104 3300005435 Ga0070714_100036329 Ga0070714_1000363292 265
105 3300005458 Ga0070681_10011998 Ga0070681_100119987 265
106 3300005530 Ga0070679_100084905 Ga0070679_1000849052 265
107 3300005535 Ga0070684_100007585 Ga0070684_1000075853 265
108 3300005539 Ga0068853_100040607 Ga0068853_1000406072 265
109 3300005539 Ga0068853_100210590 Ga0068853_1002105902 265
110 3300005548 Ga0070665_100531061 Ga0070665_1005310612 265
111 3300005563 Ga0068855_100052601 Ga0068855_1000526014 265
112 3300005564 Ga0070664_100022882 Ga0070664_1000228822 265
113 3300005577 Ga0068857_100032787 Ga0068857_1000327872 265
114 3300005616 Ga0068852_100002836 Ga0068852_1000028365 265
115 3300005618 Ga0068864_100043131 Ga0068864_1000431312 265
116 3300005981 Ga0081538_10031337 Ga0081538_100313375 265
117 3300005985 Ga0081539_10000482 Ga0081539_1000048247 265
118 3300009093 Ga0105240_10356434 Ga0105240_103564341 265
119 3300009098 Ga0105245_10125404 Ga0105245_101254042 265
120 3300009176 Ga0105242_10001238 Ga0105242_100012389 265
121 3300009177 Ga0105248_10191924 Ga0105248_101919242 265
122 3300009545 Ga0105237_10026601 Ga0105237_100266012 265
123 3300009545 Ga0105237_10066508 Ga0105237_100665081 265
124 3300009551 Ga0105238_10004193 Ga0105238_1000419317 265
125 3300011119 Ga0105246_10021990 Ga0105246_100219901 265
126 3300013104 Ga0157370_10010772 Ga0157370_100107722 265
127 3300013105 Ga0157369_10029965 Ga0157369_100299652 265
128 3300013307 Ga0157372_10036672 Ga0157372_100366725 265
129 3300013307 Ga0157372_10066723 Ga0157372_100667232 265
130 3300014325 Ga0163163_10167726 Ga0163163_101677261 265
131 3300014969 Ga0157376_10185468 Ga0157376_101854684 265
132 3300020081 Ga0206354_10866314 Ga0206354_108663142 265
133 3300021388 Ga0213875_10094945 Ga0213875_100949451 265
134 3300022467 Ga0224712_10004226 Ga0224712_100042264 265
135 3300025903 Ga0207680_10136550 Ga0207680_101365501 265
136 3300025912 Ga0207707_10272597 Ga0207707_102725972 265
137 3300025914 Ga0207671_10037293 Ga0207671_100372933 265
138 3300025919 Ga0207657_10022308 Ga0207657_100223082 265
139 3300025919 Ga0207657_10380841 Ga0207657_103808411 265
140 3300025920 Ga0207649_10169554 Ga0207649_101695541 265
141 3300025921 Ga0207652_10030451 Ga0207652_100304514 265
142 3300025924 Ga0207694_10063203 Ga0207694_100632032 265
143 3300025925 Ga0207650_10178562 Ga0207650_101785622 265
144 3300025929 Ga0207664_10015362 Ga0207664_100153622 265
145 3300025931 Ga0207644_10057444 Ga0207644_100574441 265
146 3300025932 Ga0207690_10045859 Ga0207690_100458592 265
147 3300025932 Ga0207690_10200737 Ga0207690_102007372 265
148 3300025933 Ga0207706_10100956 Ga0207706_101009562 265
149 3300025934 Ga0207686_10003352 Ga0207686_100033524 265
150 3300025937 Ga0207669_10105917 Ga0207669_101059172 265
151 3300025944 Ga0207661_10050043 Ga0207661_100500432 265
152 3300025945 Ga0207679_10084132 Ga0207679_100841322 265
153 3300025949 Ga0207667_10082512 Ga0207667_100825122 265
154 3300026041 Ga0207639_10024863 Ga0207639_100248632 265
155 3300026089 Ga0207648_10566462 Ga0207648_105664622 265
156 3300026116 Ga0207674_10017403 Ga0207674_100174033 265
157 3300026142 Ga0207698_10121569 Ga0207698_101215692 265
158 3300031731 Ga0307405_10331894 Ga0307405_103318941 265
159 3300031852 Ga0307410_10089448 Ga0307410_100894482 265
160 3300031852 Ga0307410_10136398 Ga0307410_101363982 265
161 3300031852 Ga0307410_10262672 Ga0307410_102626721 265
162 3300031852 Ga0307410_10323461 Ga0307410_103234612 265
163 3300031901 Ga0307406_10084005 Ga0307406_100840051 265
164 3300031901 Ga0307406_10393325 Ga0307406_103933251 265
165 3300031995 Ga0307409_100423510 Ga0307409_1004235102 265
166 3300032002 Ga0307416_100160673 Ga0307416_1001606733 265
167 3300032004 Ga0307414_10131129 Ga0307414_101311292 265
168 3300032005 Ga0307411_10028752 Ga0307411_100287523 265
169 3300032126 Ga0307415_100392348 Ga0307415_1003923482 265
170 3300037466 Ga0395898_0062651 Ga0395898_0062651_2502_3305 265
171 3300037471 Ga0395905_0118639 Ga0395905_0118639_1638_2438 265
172 3300037853 Ga0436364_1504697 Ga0436364_1504697_356_1156 265
173 3300042010 Ga0439452_011744 Ga0439452_011744_1123_1923 265
174 3300042015 Ga0439462_0031064 Ga0439462_0031064_369_1169 265
175 3300044656 Ga0466969_0007394 Ga0466969_0007394_2110_2946 265
176 3300044656 Ga0466969_0021506 Ga0466969_0021506_2169_3008 265
177 3300044684 Ga0466966_0008826 Ga0466966_0008826_945_1781 265
178 3300044693 Ga0466961_0023712 Ga0466961_0023712_1572_2408 265
179 3300044694 Ga0466963_0021425 Ga0466963_0021425_1926_2723 265
180 3300044719 Ga0466971_0031885 Ga0466971_0031885_1028_1864 265
181 3300044735 Ga0466968_0014225 Ga0466968_0014225_1310_2107 265
182 3300044842 Ga0466957_0021049 Ga0466957_0021049_1289_2086 265
183 3300044842 Ga0466957_0068655 Ga0466957_0068655_909_1706 265
184 3300044901 Ga0466960_0009323 Ga0466960_0009323_2723_3520 265
185 3300044901 Ga0466960_0039679 Ga0466960_0039679_1027_1848 265
186 3300045049 Ga0466959_0023664 Ga0466959_0023664_476_1312 265
187 3300045836 Ga0466958_0015181 Ga0466958_0015181_2969_3766 265
188 3300045976 Ga0466967_0005513 Ga0466967_0005513_3278_4075 265
189 3300045976 Ga0466967_0142445 Ga0466967_0142445_732_1529 265
190 3300048912 Ga0496109_0402126 Ga0496109_0402126_287_1087 265
191 3300048915 Ga0496112_0105113 Ga0496112_0105113_1762_2562 265
192 3300048916 Ga0496113_0021492 Ga0496113_0021492_3373_4173 265
193 3300049568 Ga0501031_0053097 Ga0501031_0053097_914_1732 265
194 3300049569 Ga0501032_0121543 Ga0501032_0121543_865_1677 265
195 3300049570 Ga0501033_0009986 Ga0501033_0009986_4036_4848 265
196 3300049570 Ga0501033_0011013 Ga0501033_0011013_4991_5809 265
197 3300049571 Ga0501034_0125723 Ga0501034_0125723_1470_2282 265
198 3300049572 Ga0501036_0013254 Ga0501036_0013254_820_1638 265
199 3300049572 Ga0501036_0099123 Ga0501036_0099123_1426_2241 265
200 3300049572 Ga0501036_0283509 Ga0501036_0283509_516_1328 265
201 3300049573 Ga0501037_0042262 Ga0501037_0042262_864_1682 265
202 3300049573 Ga0501037_0193094 Ga0501037_0193094_188_1003 265
203 3300049575 Ga0501039_0035195 Ga0501039_0035195_1453_2268 265
204 3300049575 Ga0501039_0148602 Ga0501039_0148602_852_1670 265
205 3300049576 Ga0501040_0038543 Ga0501040_0038543_687_1502 265
206 3300049577 Ga0501041_0005791 Ga0501041_0005791_1947_2762 265
207 3300049578 Ga0501042_0031210 Ga0501042_0031210_361_1176 265
208 3300049578 Ga0501042_0085967 Ga0501042_0085967_648_1466 265
209 3300049579 Ga0501043_0054480 Ga0501043_0054480_1482_2300 265
210 3300049579 Ga0501043_0086894 Ga0501043_0086894_796_1608 265
211 3300049579 Ga0501043_0303627 Ga0501043_0303627_65_880 265
212 3300049580 Ga0501046_0079648 Ga0501046_0079648_1408_2223 265
213 3300049583 Ga0501067_0004550 Ga0501067_0004550_5712_6530 265
214 3300049587 Ga0501071_0009808 Ga0501071_0009808_3236_4051 265
215 3300049588 Ga0501072_0031750 Ga0501072_0031750_196_1011 265
216 3300049589 Ga0501073_0012316 Ga0501073_0012316_4555_5373 265
217 3300049589 Ga0501073_0139373 Ga0501073_0139373_421_1236 265
218 3300049590 Ga0501074_0080356 Ga0501074_0080356_510_1328 265
219 3300049590 Ga0501074_0249757 Ga0501074_0249757_161_976 265
220 3300049591 Ga0501075_0006286 Ga0501075_0006286_7214_8029 265
221 3300049592 Ga0501076_0003869 Ga0501076_0003869_6843_7658 265
222 3300049593 Ga0501077_0004001 Ga0501077_0004001_1227_2042 265
223 3300049741 Ga0501079_0041475 Ga0501079_0041475_1433_2248 265
224 3300049742 Ga0501080_0005223 Ga0501080_0005223_9949_10767 265
225 3300049742 Ga0501080_0156612 Ga0501080_0156612_859_1674 265
226 3300049823 Ga0501044_0036093 Ga0501044_0036093_3532_4350 265
227 3300049824 Ga0501045_0026474 Ga0501045_0026474_1056_1871 265
228 3300054114 Ga0501084_0019440 Ga0501084_0019440_1401_2216 265
229 3300059421 Ga0590071_003471 Ga0590071_003471_2751_3557 265
230 3300059424 Ga0590075_001939 Ga0590075_001939_3087_3893 265
231 3300059424 Ga0590075_030101 Ga0590075_030101_151_969 265
232 3300060353 Ga0501082_0051062 Ga0501082_0051062_211_1029 265
233 3300061719 Ga0466962_0101199 Ga0466962_0101199_188_1024 265
234 3300061734 Ga0530510_0063254 Ga0530510_0063254_284_1099 265

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

52

242

0.97

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

58

260

0.91

PF08659

KR

KR domain

53

231

0.86

PF23441

46

284

0.85

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

54

231

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
2jap-assembly1.cif.gz_C clavulanic acid dehydrogenase: structural and biochemical analysis of the final step in the biosynthesis of the beta-lactamase inhibitor clavulanic acid 0.9366 8 230
4bmv-assembly4.cif.gz_I short-chain dehydrogenase from sphingobium yanoikuyae in complex with nadph 0.9362 8 230
4bmv-assembly2.cif.gz_D short-chain dehydrogenase from sphingobium yanoikuyae in complex with nadph 0.9283 7 230
6ze0-assembly1.cif.gz_A orthorhombic crystal structure of the bulky-bulky ketone specific alcohol dehydrogenase from comamonas testosteroni 0.9261 8 230
6zdz-assembly1.cif.gz_B tetragonal crystal structure of the bulky-bulky ketone specific alcohol dehydrogenase from comamonas testosteroni 0.9261 6 230
ID Description Score Start End Superfamily
af_A0A0P0Y501_3_211_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.943 8 194 3.40.50.720
af_U4PBL3_32_278_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9425 7 229 3.40.50.720
af_F4J128_251_373_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9383 91 190 3.40.50.720
af_F1QWW8_53_297_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9364 8 230 3.40.50.720
af_A0A0R0IEI4_1_176_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9351 51 185 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A1H2MUZ0-F1-model_v4 Short-chain dehydrogenase 0.9969 7 261 GO:0016020
GO:0016491
AF-A0A1A3HLD6-F1-model_v4 Oxidoreductase 0.9941 37 261 GO:0016020
GO:0016491
AF-A0A7W4QVU7-F1-model_v4 deleted 0.9937 44 261
AF-M2ZIV4-F1-model_v4 Dehydrogenase DhgA 0.9928 3 265 GO:0016020
GO:0016491
AF-A0A7U0T1C9-F1-model_v4 deleted 0.9925 33 261

Feature Viewer

pLDDT pTM Quality
95.45 0.92 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map