F346979

General Info

Members Datasets Scaffolds Average Seq Length
234 138 234 397

Family's Representative Sequence

Representative Sequence 3300006844|Ga0075428_100112343|Ga0075428_1001123432
Length 467
Sequence MSDDRPGGDAPVHELRTPGDRPEVGARLARTGEAGEVAEGEGVGVRGGRRTVAWFHCFSGIAGDMALGGLIDAGADLDEVRALLHRLPVSGWTVEAEPVLRGGIAATKIHVHAADDAVVRTAAHIVGLVEEARLPARVTSRARAVFHALADTEGRLHRRPAEQVHFHEVGGIDAIIDVVGTCAALEVLGIDEVHASPVATGTGMVRAAHGLLPNPPPAVVELLRSAPTYGIDLPVELTTPTGAALLAAMVSRWGALPAVRILASGYGAGSRELEGRPNAVQVVLGEAAESPPGRVGQRPGQPVVLLEANLDDATGEVLAHTIAALLEAGAHDAWITPIVMKKGRPAHVVSALADPSLAEQVATTLAAESGTLGLRGLTMERWPAARSTATVDVDGLPIRVKLSPGRIKVEHDDAAWVARQRGIPLREVLARAEAEARRTRHLTAADPAGPADAAAPPPSLDPGDATA

Samples

Sample ID Description Type Environment
1 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
2 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
3 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
4 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
5 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
6 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
7 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
8 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
9 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
10 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
11 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
12 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
13 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
14 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
15 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
16 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
17 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
18 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
19 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
20 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
23 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
24 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
26 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
28 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
29 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
30 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
31 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
32 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
33 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
34 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
35 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
36 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
37 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
55 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
56 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
57 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
58 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
59 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
60 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
61 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
62 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
63 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
64 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
65 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
66 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
67 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
68 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
69 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
70 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
71 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
72 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
73 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
74 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
75 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
76 3300042011 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z062817_5204 Metagenome Rhizosphere
77 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
78 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
79 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
80 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
81 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
82 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
83 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
84 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
85 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
86 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
87 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
88 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
89 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
90 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
91 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
92 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
93 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
94 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
95 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
96 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
97 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
98 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
99 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
100 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
103 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
110 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
111 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
112 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
113 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
114 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
115 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
116 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
117 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
118 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
119 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
120 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
121 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
123 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
124 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
125 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
126 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
127 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
128 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
129 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
130 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
131 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
132 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
133 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
134 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
135 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
136 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
137 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
138 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.11
Nodule 0
Rhizoplane 2.99
Rhizosphere 82.91
Stem 0
Stem Tuber 0
Unclassified 2.99

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25407J50210_10001572 3300003373 Bacteria 5200
2 Ga0070671_100061683 3300005355 Bacteria 3122
3 Ga0070708_100002871 3300005445 Bacteria 13372
4 Ga0070708_100033721 3300005445 Bacteria 4449
5 Ga0070681_10063076 3300005458 Bacteria 3679
6 Ga0070681_10093975 3300005458 Bacteria 2947
7 Ga0070706_100023820 3300005467 Bacteria 5636
8 Ga0070706_100129694 3300005467 Bacteria 2353
9 Ga0070704_100105599 3300005549 Bacteria 2133
10 Ga0068855_100054295 3300005563 Bacteria 4709
11 Ga0068856_100041517 3300005614 Bacteria 4521
12 Ga0068866_10032915 3300005718 Bacteria 2510
13 Ga0068858_100026639 3300005842 Bacteria 5370
14 Ga0068860_100044367 3300005843 Bacteria 4238
15 Ga0068860_100291399 3300005843 Bacteria 1597
16 Ga0081455_10003831 3300005937 Bacteria 17155
17 Ga0081455_10037221 3300005937 Bacteria 4324
18 Ga0081455_10087729 3300005937 Bacteria 2531
19 Ga0081538_10002574 3300005981 Bacteria 17616
20 Ga0081538_10004810 3300005981 Bacteria 12311
21 Ga0075365_10000082 3300006038 Bacteria 27803
22 Ga0075365_10010573 3300006038 Bacteria 5383
23 Ga0075365_10041756 3300006038 Bacteria 2997
24 Ga0075365_10054926 3300006038 Bacteria 2642
25 Ga0075365_10087294 3300006038 Bacteria 2121
26 Ga0075368_10052217 3300006042 Bacteria 1626
27 Ga0075363_100018830 3300006048 Bacteria 3444
28 Ga0075363_100073308 3300006048 Bacteria 1863
29 Ga0075364_10010658 3300006051 Bacteria 5558
30 Ga0075364_10047685 3300006051 Bacteria 2791
31 Ga0075367_10006288 3300006178 Bacteria 5987
32 Ga0075367_10030124 3300006178 Bacteria 3108
33 Ga0075367_10088860 3300006178 Bacteria 1878
34 Ga0075428_100000001 3300006844 Bacteria 772630
35 Ga0075428_100004349 3300006844 Bacteria 15621
36 Ga0075428_100004799 3300006844 Bacteria 14992
37 Ga0075428_100112343 3300006844 Bacteria 2967
38 Ga0075428_100129819 3300006844 Bacteria 2741
39 Ga0075428_100337889 3300006844 Bacteria 1617
40 Ga0075430_100007688 3300006846 Bacteria 9105
41 Ga0075430_100017672 3300006846 Bacteria 6073
42 Ga0075430_100028628 3300006846 Bacteria 4732
43 Ga0075430_100083410 3300006846 Bacteria 2677
44 Ga0075431_100002045 3300006847 Bacteria 19282
45 Ga0075431_100039737 3300006847 Bacteria 4847
46 Ga0075431_100052515 3300006847 Bacteria 4204
47 Ga0075431_100136256 3300006847 Bacteria 2531
48 Ga0075431_100155551 3300006847 Bacteria 2352
49 Ga0075429_100001553 3300006880 Bacteria 18858
50 Ga0075429_100011604 3300006880 Bacteria 7642
51 Ga0075429_100011800 3300006880 Bacteria 7575
52 Ga0105240_10130269 3300009093 Bacteria 3018
53 Ga0111539_10008660 3300009094 Bacteria 12914
54 Ga0111539_10018573 3300009094 Bacteria 8613
55 Ga0111539_10328803 3300009094 Bacteria 1779
56 Ga0105245_10141786 3300009098 Bacteria 2264
57 Ga0105245_10162820 3300009098 Bacteria 2118
58 Ga0114129_10001629 3300009147 Bacteria 30482
59 Ga0114129_10006791 3300009147 Bacteria 16247
60 Ga0114129_10006942 3300009147 Bacteria 16109
61 Ga0114129_10279691 3300009147 Bacteria 2230
62 Ga0105243_10011617 3300009148 Bacteria 6661
63 Ga0105241_10097634 3300009174 Bacteria 2330
64 Ga0105242_10017928 3300009176 Bacteria 5529
65 Ga0105237_10089281 3300009545 Bacteria 3072
66 Ga0105249_10068898 3300009553 Bacteria 3264
67 Ga0105239_10055665 3300010375 Bacteria 4338
68 Ga0105239_10229751 3300010375 Bacteria 2081
69 Ga0157378_10003462 3300013297 Bacteria 14010
70 Ga0157375_10086022 3300013308 Bacteria 3194
71 Ga0157379_10259717 3300014968 Bacteria 1578
72 Ga0157376_10213055 3300014969 Bacteria 1785
73 Ga0207707_10073439 3300025912 Bacteria 2983
74 Ga0207695_10204475 3300025913 Bacteria 1888
75 Ga0207671_10160249 3300025914 Bacteria 1742
76 Ga0207662_10013534 3300025918 Bacteria 4563
77 Ga0207652_10236477 3300025921 Bacteria 1647
78 Ga0207687_10012713 3300025927 Bacteria 5501
79 Ga0207687_10102769 3300025927 Bacteria 2106
80 Ga0207644_10017981 3300025931 Bacteria 4780
81 Ga0207709_10025836 3300025935 Bacteria 3366
82 Ga0207661_10168578 3300025944 Bacteria 1905
83 Ga0207667_10043570 3300025949 Bacteria 4762
84 Ga0207677_10092294 3300026023 Bacteria 2204
85 Ga0207703_10008047 3300026035 Bacteria 8332
86 Ga0207702_10044722 3300026078 Bacteria 3722
87 Ga0207648_10008347 3300026089 Bacteria 10041
88 Ga0207698_10222423 3300026142 Bacteria 1707
89 Ga0268265_10065261 3300028380 Bacteria 2809
90 Ga0268264_10016041 3300028381 Bacteria 6137
91 Ga0265325_10064060 3300031241 Bacteria 1859
92 Ga0265327_10000474 3300031251 Bacteria 70843
93 Ga0265327_10068292 3300031251 Bacteria 1788
94 Ga0316575_10030435 3300031665 Bacteria 2110
95 Ga0307409_100081169 3300031995 Bacteria 2620
96 Ga0307411_10061291 3300032005 Bacteria 2504
97 Ga0316583_10016389 3300032133 Bacteria 2667
98 Ga0373930_0002330 3300034816 Bacteria 2933
99 Ga0373928_0000342 3300035084 Bacteria 9339
100 Ga0373929_0000768 3300035085 Bacteria 6249
101 Ga0373932_0005356 3300035112 Bacteria 3018
102 Ga0316574_0022887 3300035398 Bacteria 3726
103 Ga0316574_0051654 3300035398 Bacteria 2563
104 Ga0316574_0077736 3300035398 Bacteria 2103
105 Ga0373931_0000006 3300035691 Bacteria 437006
106 Ga0373931_0000014 3300035691 Bacteria 251374
107 Ga0373947_0043981 3300035725 Bacteria 2669
108 Ga0316582_0163188 3300036647 Bacteria 1510
109 Ga0316584_0112910 3300036712 Bacteria 2033
110 Ga0316584_0147450 3300036712 Bacteria 1753
111 Ga0395905_0164291 3300037471 Bacteria 2086
112 Ga0400490_23044 3300038726 Bacteria 2803
113 Ga0400490_49928 3300038726 Bacteria 25256
114 Ga0400483_141233 3300039062 Bacteria 3520
115 Ga0400483_246244 3300039062 Unclassified 3757
116 Ga0436365_0065633 3300039437 Bacteria 26197
117 Ga0436365_0075983 3300039437 Bacteria 12347
118 Ga0436362_0430199 3300039453 Bacteria 8535
119 Ga0451837_0238126 3300041494 Bacteria 2127
120 Ga0439450_008902 3300042008 Bacteria 1888
121 Ga0439454_003771 3300042011 Bacteria 1707
122 Ga0439463_001706 3300042016 Bacteria 5744
123 Ga0439460_0004666 3300042461 Bacteria 3343
124 Ga0451577_0061842 3300042876 Bacteria 3339
125 Ga0439440_0001284 3300042993 Bacteria 4555
126 Ga0453683_0000001 3300044673 Bacteria 1384965
127 Ga0453683_0000012 3300044673 Bacteria 376341
128 Ga0453683_0000695 3300044673 Bacteria 35158
129 Ga0453683_0001737 3300044673 Bacteria 18079
130 Ga0453683_0004941 3300044673 Bacteria 9370
131 Ga0466961_0069407 3300044693 Bacteria 2237
132 Ga0453684_0000231 3300044712 Bacteria 241070
133 Ga0451576_0000026 3300045051 Bacteria 427585
134 Ga0451576_0006943 3300045051 Bacteria 13709
135 Ga0466958_0123967 3300045836 Bacteria 1619
136 Ga0495651_0004004 3300046462 Bacteria 11265
137 Ga0495618_0041076 3300046514 Unclassified 2912
138 Ga0495667_0018725 3300046559 Bacteria 4674
139 Ga0495656_0027942 3300046615 Bacteria 2258
140 Ga0495657_0017815 3300046675 Bacteria 5150
141 Ga0495623_0057083 3300046679 Bacteria 2456
142 Ga0495680_0017946 3300047322 Bacteria 6020
143 Ga0495675_0033175 3300047444 Bacteria 3295
144 Ga0496101_0016548 3300048904 Bacteria 4986
145 Ga0496103_0324130 3300048906 Bacteria 991
146 Ga0496104_0017571 3300048907 Bacteria 6516
147 Ga0496110_0028733 3300048913 Bacteria 4779
148 Ga0496111_0031210 3300048914 Bacteria 3795
149 Ga0496114_0011988 3300048917 Bacteria 6932
150 Ga0496114_0245595 3300048917 Bacteria 1575
151 Ga0501033_0003270 3300049570 Bacteria 13411
152 Ga0501034_0001582 3300049571 Bacteria 29653
153 Ga0501034_0003015 3300049571 Bacteria 19477
154 Ga0501034_0004248 3300049571 Bacteria 15979
155 Ga0501034_0008031 3300049571 Bacteria 11199
156 Ga0501034_0042837 3300049571 Bacteria 4582
157 Ga0501034_0069257 3300049571 Bacteria 3539
158 Ga0501036_0115302 3300049572 Bacteria 2270
159 Ga0501039_0002201 3300049575 Bacteria 14424
160 Ga0501039_0038567 3300049575 Bacteria 3689
161 Ga0501040_0001028 3300049576 Bacteria 17701
162 Ga0501041_0001643 3300049577 Bacteria 12503
163 Ga0501041_0015199 3300049577 Bacteria 4570
164 Ga0501041_0106055 3300049577 Bacteria 1742
165 Ga0501042_0041746 3300049578 Bacteria 3263
166 Ga0501046_0011417 3300049580 Bacteria 7594
167 Ga0501046_0090897 3300049580 Bacteria 2348
168 Ga0501048_0038581 3300049582 Bacteria 3427
169 Ga0501067_0034014 3300049583 Bacteria 2828
170 Ga0501068_0000013 3300049584 Bacteria 62800
171 Ga0501069_0000498 3300049585 Bacteria 17879
172 Ga0501069_0004972 3300049585 Bacteria 6896
173 Ga0501070_0000026 3300049586 Bacteria 150349
174 Ga0501070_0005022 3300049586 Bacteria 11287
175 Ga0501070_0006326 3300049586 Bacteria 10077
176 Ga0501070_0012029 3300049586 Bacteria 7304
177 Ga0501071_0002096 3300049587 Bacteria 11965
178 Ga0501072_0003265 3300049588 Bacteria 12189
179 Ga0501072_0046290 3300049588 Bacteria 3423
180 Ga0501072_0211820 3300049588 Bacteria 1544
181 Ga0501073_0001051 3300049589 Bacteria 19911
182 Ga0501073_0001202 3300049589 Bacteria 18874
183 Ga0501075_0022273 3300049591 Bacteria 4626
184 Ga0501077_0000891 3300049593 Bacteria 17957
185 Ga0501079_0002112 3300049741 Bacteria 14285
186 Ga0501079_0003773 3300049741 Bacteria 11192
187 Ga0501080_0003683 3300049742 Bacteria 13518
188 Ga0501080_0005374 3300049742 Bacteria 11423
189 Ga0501080_0020289 3300049742 Bacteria 6150
190 Ga0501080_0062298 3300049742 Bacteria 3471
191 Ga0501080_0143902 3300049742 Bacteria 2204
192 Ga0501080_0321314 3300049742 Bacteria 1401
193 Ga0501080_0418925 3300049742 Bacteria 1203
194 Ga0501083_0178819 3300049744 Bacteria 1386
195 Ga0501044_0131396 3300049823 Bacteria 2497
196 Ga0501045_0001848 3300049824 Bacteria 14314
197 nmdc:mga03n38_154679_c1 3300050490 Bacteria 1156
198 nmdc:mga03n38_18431_c1 3300050490 Bacteria 2756
199 nmdc:mga03n38_5094_c1 3300050490 Bacteria 4435
200 nmdc:mga00v17_121864_c1 3300050491 Bacteria 1661
201 nmdc:mga00v17_40968_c1 3300050491 Bacteria 2780
202 nmdc:mga00v17_8923_c1 3300050491 Bacteria 5409
203 nmdc:mga0yw44_185540_c1 3300050492 Bacteria 1370
204 nmdc:mga0yw44_31729_c1 3300050492 Bacteria 3074
205 nmdc:mga0yw44_4803_c1 3300050492 Bacteria 6269
206 nmdc:mga0yw44_58_c1 3300050492 Bacteria 40044
207 nmdc:mga05p37_200312_c1 3300050507 Bacteria 2419
208 nmdc:mga05p37_489264_c1 3300050507 Bacteria 1415
209 nmdc:mga05p37_66752_c1 3300050507 Bacteria 4425
210 nmdc:mga05p37_9483_c2 3300050507 Bacteria 8325
211 nmdc:mga09592_1445_c1 3300050508 Bacteria 19047
212 nmdc:mga09592_23353_c1 3300050508 Bacteria 5108
213 nmdc:mga0qj67_1090_c1 3300050509 Bacteria 18806
214 nmdc:mga0qj67_128550_c1 3300050509 Bacteria 2051
215 nmdc:mga0qj67_133223_c1 3300050509 Bacteria 2013
216 nmdc:mga0qj67_17007_c1 3300050509 Bacteria 5525
217 nmdc:mga0qj67_3813_c1 3300050509 Bacteria 10890
218 nmdc:mga06r32_14447_c1 3300050510 Bacteria 7167
219 nmdc:mga06r32_1828_c1 3300050510 Bacteria 18997
220 nmdc:mga06r32_42296_c1 3300050510 Bacteria 4332
221 nmdc:mga06r32_5819_c1 3300050510 Bacteria 11107
222 nmdc:mga06r32_91492_c1 3300050510 Bacteria 2973
223 nmdc:mga08y16_15953_c1 3300050511 Bacteria 7897
224 nmdc:mga08y16_264389_c1 3300050511 Bacteria 1776
225 nmdc:mga08y16_99982_c1 3300050511 Bacteria 3020
226 Ga0500635_0009538 3300053080 Bacteria 2695
227 Ga0495595_0039575 3300053084 Bacteria 2151
228 Ga0495619_0098232 3300053085 Unclassified 1990
229 Ga0500566_0000162 3300053094 Bacteria 34256
230 Ga0500568_0000189 3300053139 Bacteria 53789
231 Ga0501084_0001885 3300054114 Bacteria 16718
232 Ga0501084_0001967 3300054114 Bacteria 16416
233 Ga0501082_0008758 3300060353 Bacteria 8722
234 Ga0530510_0001967 3300061734 Bacteria 14070

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300050491 nmdc:mga00v17_121864_c1 nmdc:mga00v17_121864_c1_662_1618 283
2 3300048906 Ga0496103_0324130 Ga0496103_0324130_10_963 291
3 3300050490 nmdc:mga03n38_154679_c1 nmdc:mga03n38_154679_c1_96_1124 309
4 3300050490 nmdc:mga03n38_18431_c1 nmdc:mga03n38_18431_c1_433_1656 318
5 3300049742 Ga0501080_0418925 Ga0501080_0418925_13_1119 339
6 3300049584 Ga0501068_0000013 Ga0501068_0000013_52708_53874 343
7 3300049589 Ga0501073_0001202 Ga0501073_0001202_17466_18632 343
8 3300049742 Ga0501080_0062298 Ga0501080_0062298_2145_3311 343
9 3300050492 nmdc:mga0yw44_185540_c1 nmdc:mga0yw44_185540_c1_35_1291 344
10 3300038726 Ga0400490_49928 Ga0400490_49928_1682_2866 345
11 3300009176 Ga0105242_10017928 Ga0105242_100179286 346
12 3300013308 Ga0157375_10086022 Ga0157375_100860222 346
13 3300014969 Ga0157376_10213055 Ga0157376_102130552 346
14 3300048907 Ga0496104_0017571 Ga0496104_0017571_2228_3433 346
15 3300048917 Ga0496114_0011988 Ga0496114_0011988_1680_2885 346
16 3300006846 Ga0075430_100028628 Ga0075430_1000286284 347
17 3300006847 Ga0075431_100052515 Ga0075431_1000525152 347
18 3300009148 Ga0105243_10011617 Ga0105243_100116175 347
19 3300013297 Ga0157378_10003462 Ga0157378_1000346212 347
20 3300031995 Ga0307409_100081169 Ga0307409_1000811692 347
21 3300050509 nmdc:mga0qj67_3813_c1 nmdc:mga0qj67_3813_c1_1860_3257 347
22 3300050510 nmdc:mga06r32_91492_c1 nmdc:mga06r32_91492_c1_222_1619 347
23 3300005718 Ga0068866_10032915 Ga0068866_100329152 349
24 3300006038 Ga0075365_10010573 Ga0075365_100105733 349
25 3300006051 Ga0075364_10010658 Ga0075364_100106583 349
26 3300009147 Ga0114129_10006942 Ga0114129_1000694214 349
27 3300025918 Ga0207662_10013534 Ga0207662_100135345 349
28 3300025935 Ga0207709_10025836 Ga0207709_100258362 349
29 3300026089 Ga0207648_10008347 Ga0207648_100083478 349
30 3300048904 Ga0496101_0016548 Ga0496101_0016548_3299_4528 349
31 3300048913 Ga0496110_0028733 Ga0496110_0028733_814_2043 349
32 3300048914 Ga0496111_0031210 Ga0496111_0031210_2120_3349 349
33 3300049742 Ga0501080_0321314 Ga0501080_0321314_65_1285 349
34 3300050491 nmdc:mga00v17_8923_c1 nmdc:mga00v17_8923_c1_1993_3225 349
35 3300050492 nmdc:mga0yw44_4803_c1 nmdc:mga0yw44_4803_c1_3124_4356 349
36 3300050509 nmdc:mga0qj67_1090_c1 nmdc:mga0qj67_1090_c1_4558_5958 349
37 3300050510 nmdc:mga06r32_1828_c1 nmdc:mga06r32_1828_c1_9049_10449 349
38 3300009553 Ga0105249_10068898 Ga0105249_100688983 351
39 3300006051 Ga0075364_10047685 Ga0075364_100476853 352
40 3300006178 Ga0075367_10006288 Ga0075367_100062884 352
41 3300009094 Ga0111539_10018573 Ga0111539_100185739 354
42 3300009147 Ga0114129_10279691 Ga0114129_102796912 354
43 3300025927 Ga0207687_10102769 Ga0207687_101027692 354
44 3300026023 Ga0207677_10092294 Ga0207677_100922942 354
45 3300028380 Ga0268265_10065261 Ga0268265_100652612 354
46 3300050507 nmdc:mga05p37_489264_c1 nmdc:mga05p37_489264_c1_189_1376 354
47 3300050511 nmdc:mga08y16_15953_c1 nmdc:mga08y16_15953_c1_1474_2661 354
48 3300005843 Ga0068860_100044367 Ga0068860_1000443673 355
49 3300006042 Ga0075368_10052217 Ga0075368_100522172 355
50 3300006048 Ga0075363_100018830 Ga0075363_1000188303 355
51 3300006178 Ga0075367_10030124 Ga0075367_100301243 355
52 3300006844 Ga0075428_100004349 Ga0075428_1000043493 355
53 3300006846 Ga0075430_100007688 Ga0075430_1000076882 355
54 3300006847 Ga0075431_100039737 Ga0075431_1000397372 355
55 3300006880 Ga0075429_100011800 Ga0075429_1000118002 355
56 3300050490 nmdc:mga03n38_5094_c1 nmdc:mga03n38_5094_c1_109_1392 355
57 3300006048 Ga0075363_100073308 Ga0075363_1000733082 356
58 3300006846 Ga0075430_100017672 Ga0075430_1000176723 359
59 3300006847 Ga0075431_100002045 Ga0075431_10000204515 359
60 3300006880 Ga0075429_100001553 Ga0075429_1000015536 359
61 3300042876 Ga0451577_0061842 Ga0451577_0061842_1313_2470 359
62 3300044673 Ga0453683_0000001 Ga0453683_0000001_634804_635961 359
63 3300044673 Ga0453683_0000012 Ga0453683_0000012_170064_171236 359
64 3300045051 Ga0451576_0000026 Ga0451576_0000026_145453_146625 359
65 3300045051 Ga0451576_0006943 Ga0451576_0006943_8385_9542 359
66 3300049571 Ga0501034_0003015 Ga0501034_0003015_11255_12469 359
67 3300049586 Ga0501070_0012029 Ga0501070_0012029_1564_2778 359
68 3300044673 Ga0453683_0001737 Ga0453683_0001737_8095_9270 360
69 3300050508 nmdc:mga09592_1445_c1 nmdc:mga09592_1445_c1_4589_5809 360
70 3300050509 nmdc:mga0qj67_17007_c1 nmdc:mga0qj67_17007_c1_2697_3917 360
71 3300050510 nmdc:mga06r32_5819_c1 nmdc:mga06r32_5819_c1_5643_6863 360
72 3300031665 Ga0316575_10030435 Ga0316575_100304352 361
73 3300032133 Ga0316583_10016389 Ga0316583_100163893 361
74 3300044712 Ga0453684_0000231 Ga0453684_0000231_154474_155676 362
75 3300049571 Ga0501034_0069257 Ga0501034_0069257_381_1718 362
76 3300005563 Ga0068855_100054295 Ga0068855_1000542952 363
77 3300005614 Ga0068856_100041517 Ga0068856_1000415172 363
78 3300009093 Ga0105240_10130269 Ga0105240_101302693 363
79 3300009094 Ga0111539_10328803 Ga0111539_103288032 363
80 3300009174 Ga0105241_10097634 Ga0105241_100976342 363
81 3300009545 Ga0105237_10089281 Ga0105237_100892812 363
82 3300010375 Ga0105239_10055665 Ga0105239_100556654 363
83 3300010375 Ga0105239_10229751 Ga0105239_102297511 363
84 3300025913 Ga0207695_10204475 Ga0207695_102044752 363
85 3300025914 Ga0207671_10160249 Ga0207671_101602492 363
86 3300025949 Ga0207667_10043570 Ga0207667_100435702 363
87 3300026078 Ga0207702_10044722 Ga0207702_100447223 363
88 3300035398 Ga0316574_0077736 Ga0316574_0077736_330_1508 363
89 3300044673 Ga0453683_0000695 Ga0453683_0000695_29811_31040 363
90 3300049571 Ga0501034_0001582 Ga0501034_0001582_19596_20891 363
91 3300050511 nmdc:mga08y16_264389_c1 nmdc:mga08y16_264389_c1_309_1478 363
92 3300009098 Ga0105245_10141786 Ga0105245_101417863 364
93 3300036647 Ga0316582_0163188 Ga0316582_0163188_83_1264 364
94 3300038726 Ga0400490_23044 Ga0400490_23044_1396_2583 364
95 3300039062 Ga0400483_141233 Ga0400483_141233_486_1673 364
96 3300039062 Ga0400483_246244 Ga0400483_246244_2139_3326 364
97 3300048917 Ga0496114_0245595 Ga0496114_0245595_283_1491 364
98 3300049572 Ga0501036_0115302 Ga0501036_0115302_929_2227 364
99 3300025944 Ga0207661_10168578 Ga0207661_101685782 365
100 3300026142 Ga0207698_10222423 Ga0207698_102224232 365
101 3300031241 Ga0265325_10064060 Ga0265325_100640603 365
102 3300044693 Ga0466961_0069407 Ga0466961_0069407_101_1378 366
103 3300045836 Ga0466958_0123967 Ga0466958_0123967_101_1378 366
104 3300049571 Ga0501034_0042837 Ga0501034_0042837_364_1689 366
105 3300049823 Ga0501044_0131396 Ga0501044_0131396_796_2031 366
106 3300009098 Ga0105245_10162820 Ga0105245_101628202 367
107 3300035398 Ga0316574_0022887 Ga0316574_0022887_1279_2490 367
108 3300035398 Ga0316574_0051654 Ga0316574_0051654_423_1736 367
109 3300036712 Ga0316584_0112910 Ga0316584_0112910_696_2009 367
110 3300044673 Ga0453683_0004941 Ga0453683_0004941_5660_6853 367
111 3300053080 Ga0500635_0009538 Ga0500635_0009538_286_1518 367
112 3300006038 Ga0075365_10041756 Ga0075365_100417562 368
113 3300036712 Ga0316584_0147450 Ga0316584_0147450_83_1393 368
114 3300049585 Ga0501069_0000498 Ga0501069_0000498_11502_12719 368
115 3300049586 Ga0501070_0000026 Ga0501070_0000026_136104_137321 368
116 3300049742 Ga0501080_0005374 Ga0501080_0005374_8834_10051 368
117 3300046615 Ga0495656_0027942 Ga0495656_0027942_324_1529 369
118 3300049571 Ga0501034_0004248 Ga0501034_0004248_8091_9338 369
119 3300006178 Ga0075367_10088860 Ga0075367_100888602 370
120 3300006844 Ga0075428_100000001 Ga0075428_100000001381 371
121 3300025921 Ga0207652_10236477 Ga0207652_102364772 371
122 3300035725 Ga0373947_0043981 Ga0373947_0043981_157_1371 371
123 3300041494 Ga0451837_0238126 Ga0451837_0238126_137_1453 371
124 3300042008 Ga0439450_008902 Ga0439450_008902_602_1801 371
125 3300042011 Ga0439454_003771 Ga0439454_003771_360_1559 371
126 3300042016 Ga0439463_001706 Ga0439463_001706_17_1216 371
127 3300042461 Ga0439460_0004666 Ga0439460_0004666_1984_3183 371
128 3300042993 Ga0439440_0001284 Ga0439440_0001284_3167_4366 371
129 3300049571 Ga0501034_0008031 Ga0501034_0008031_4760_6097 371
130 3300049577 Ga0501041_0015199 Ga0501041_0015199_1271_2572 371
131 3300049588 Ga0501072_0211820 Ga0501072_0211820_322_1521 371
132 3300050510 nmdc:mga06r32_42296_c1 nmdc:mga06r32_42296_c1_1488_2687 371
133 3300005445 Ga0070708_100002871 Ga0070708_10000287119 372
134 3300005445 Ga0070708_100033721 Ga0070708_1000337214 372
135 3300005458 Ga0070681_10063076 Ga0070681_100630763 372
136 3300005458 Ga0070681_10093975 Ga0070681_100939752 372
137 3300005467 Ga0070706_100129694 Ga0070706_1001296942 372
138 3300005549 Ga0070704_100105599 Ga0070704_1001055992 372
139 3300025912 Ga0207707_10073439 Ga0207707_100734392 372
140 3300025927 Ga0207687_10012713 Ga0207687_100127132 372
141 3300037471 Ga0395905_0164291 Ga0395905_0164291_646_1923 372
142 3300039437 Ga0436365_0075983 Ga0436365_0075983_6574_7767 372
143 3300039453 Ga0436362_0430199 Ga0436362_0430199_1241_2434 372
144 3300046514 Ga0495618_0041076 Ga0495618_0041076_294_1505 372
145 3300049575 Ga0501039_0038567 Ga0501039_0038567_2160_3461 372
146 3300049578 Ga0501042_0041746 Ga0501042_0041746_1858_3159 372
147 3300049580 Ga0501046_0090897 Ga0501046_0090897_168_1469 372
148 3300049585 Ga0501069_0004972 Ga0501069_0004972_2066_3283 372
149 3300049586 Ga0501070_0005022 Ga0501070_0005022_9505_10722 372
150 3300049587 Ga0501071_0002096 Ga0501071_0002096_3436_4653 372
151 3300049588 Ga0501072_0046290 Ga0501072_0046290_1802_3103 372
152 3300049589 Ga0501073_0001051 Ga0501073_0001051_5047_6264 372
153 3300049741 Ga0501079_0002112 Ga0501079_0002112_10192_11409 372
154 3300049742 Ga0501080_0003683 Ga0501080_0003683_9707_10924 372
155 3300053085 Ga0495619_0098232 Ga0495619_0098232_621_1832 372
156 3300053094 Ga0500566_0000162 Ga0500566_0000162_25308_26525 372
157 3300054114 Ga0501084_0001885 Ga0501084_0001885_15242_16459 372
158 3300005355 Ga0070671_100061683 Ga0070671_1000616833 373
159 3300005842 Ga0068858_100026639 Ga0068858_1000266393 373
160 3300005843 Ga0068860_100291399 Ga0068860_1002913992 373
161 3300006038 Ga0075365_10000082 Ga0075365_1000008222 373
162 3300006038 Ga0075365_10054926 Ga0075365_100549262 373
163 3300006038 Ga0075365_10087294 Ga0075365_100872941 373
164 3300006844 Ga0075428_100129819 Ga0075428_1001298192 373
165 3300014968 Ga0157379_10259717 Ga0157379_102597172 373
166 3300025931 Ga0207644_10017981 Ga0207644_100179816 373
167 3300026035 Ga0207703_10008047 Ga0207703_100080477 373
168 3300028381 Ga0268264_10016041 Ga0268264_100160411 373
169 3300034816 Ga0373930_0002330 Ga0373930_0002330_1448_2668 373
170 3300035084 Ga0373928_0000342 Ga0373928_0000342_2912_4132 373
171 3300035085 Ga0373929_0000768 Ga0373929_0000768_4323_5543 373
172 3300035112 Ga0373932_0005356 Ga0373932_0005356_690_1910 373
173 3300035691 Ga0373931_0000006 Ga0373931_0000006_84094_85314 373
174 3300035691 Ga0373931_0000014 Ga0373931_0000014_74363_75583 373
175 3300049586 Ga0501070_0006326 Ga0501070_0006326_986_2194 373
176 3300050492 nmdc:mga0yw44_31729_c1 nmdc:mga0yw44_31729_c1_1539_2753 373
177 3300050492 nmdc:mga0yw44_58_c1 nmdc:mga0yw44_58_c1_22280_23494 373
178 3300049583 Ga0501067_0034014 Ga0501067_0034014_1371_2657 374
179 3300005467 Ga0070706_100023820 Ga0070706_1000238204 375
180 3300031251 Ga0265327_10068292 Ga0265327_100682922 375
181 3300039437 Ga0436365_0065633 Ga0436365_0065633_14821_16041 375
182 3300049742 Ga0501080_0020289 Ga0501080_0020289_710_1930 375
183 3300053139 Ga0500568_0000189 Ga0500568_0000189_32394_33647 375
184 3300046462 Ga0495651_0004004 Ga0495651_0004004_4868_6250 376
185 3300046559 Ga0495667_0018725 Ga0495667_0018725_227_1609 376
186 3300046675 Ga0495657_0017815 Ga0495657_0017815_716_2098 376
187 3300046679 Ga0495623_0057083 Ga0495623_0057083_561_1943 376
188 3300047322 Ga0495680_0017946 Ga0495680_0017946_3131_4513 376
189 3300047444 Ga0495675_0033175 Ga0495675_0033175_68_1450 376
190 3300049570 Ga0501033_0003270 Ga0501033_0003270_2204_3445 376
191 3300049575 Ga0501039_0002201 Ga0501039_0002201_10743_11984 376
192 3300049576 Ga0501040_0001028 Ga0501040_0001028_14050_15291 376
193 3300049577 Ga0501041_0001643 Ga0501041_0001643_108_1349 376
194 3300049580 Ga0501046_0011417 Ga0501046_0011417_4738_5979 376
195 3300049582 Ga0501048_0038581 Ga0501048_0038581_369_1610 376
196 3300049588 Ga0501072_0003265 Ga0501072_0003265_6032_7273 376
197 3300049591 Ga0501075_0022273 Ga0501075_0022273_1371_2612 376
198 3300049593 Ga0501077_0000891 Ga0501077_0000891_12825_14066 376
199 3300049741 Ga0501079_0003773 Ga0501079_0003773_776_2017 376
200 3300049742 Ga0501080_0143902 Ga0501080_0143902_708_1949 376
201 3300049744 Ga0501083_0178819 Ga0501083_0178819_133_1374 376
202 3300049824 Ga0501045_0001848 Ga0501045_0001848_10517_11758 376
203 3300050491 nmdc:mga00v17_40968_c1 nmdc:mga00v17_40968_c1_1177_2547 376
204 3300053084 Ga0495595_0039575 Ga0495595_0039575_227_1609 376
205 3300054114 Ga0501084_0001967 Ga0501084_0001967_2024_3265 376
206 3300060353 Ga0501082_0008758 Ga0501082_0008758_4924_6165 376
207 3300061734 Ga0530510_0001967 Ga0530510_0001967_5267_6508 376
208 3300032005 Ga0307411_10061291 Ga0307411_100612912 377
209 3300005937 Ga0081455_10087729 Ga0081455_100877292 378
210 3300009094 Ga0111539_10008660 Ga0111539_1000866012 378
211 3300031251 Ga0265327_10000474 Ga0265327_1000047445 378
212 3300050507 nmdc:mga05p37_200312_c1 nmdc:mga05p37_200312_c1_151_1377 378
213 3300050511 nmdc:mga08y16_99982_c1 nmdc:mga08y16_99982_c1_396_1622 378
214 3300006844 Ga0075428_100004799 Ga0075428_10000479910 379
215 3300006847 Ga0075431_100155551 Ga0075431_1001555513 379
216 3300006880 Ga0075429_100011604 Ga0075429_1000116048 379
217 3300009147 Ga0114129_10001629 Ga0114129_100016296 379
218 3300050507 nmdc:mga05p37_66752_c1 nmdc:mga05p37_66752_c1_2499_3728 379
219 3300050507 nmdc:mga05p37_9483_c2 nmdc:mga05p37_9483_c2_3144_4394 379
220 3300050508 nmdc:mga09592_23353_c1 nmdc:mga09592_23353_c1_1801_3051 379
221 3300050509 nmdc:mga0qj67_128550_c1 nmdc:mga0qj67_128550_c1_632_1882 379
222 3300050510 nmdc:mga06r32_14447_c1 nmdc:mga06r32_14447_c1_5849_7099 379
223 3300006844 Ga0075428_100112343 Ga0075428_1001123432 381
224 3300006846 Ga0075430_100083410 Ga0075430_1000834102 381
225 3300006847 Ga0075431_100136256 Ga0075431_1001362562 381
226 3300009147 Ga0114129_10006791 Ga0114129_100067917 381
227 3300050509 nmdc:mga0qj67_133223_c1 nmdc:mga0qj67_133223_c1_322_1764 381
228 3300005937 Ga0081455_10003831 Ga0081455_1000383115 387
229 3300003373 JGI25407J50210_10001572 JGI25407J50210_100015724 390
230 3300005937 Ga0081455_10037221 Ga0081455_100372212 390
231 3300005981 Ga0081538_10002574 Ga0081538_1000257411 390
232 3300005981 Ga0081538_10004810 Ga0081538_100048108 390
233 3300006844 Ga0075428_100337889 Ga0075428_1003378891 390
234 3300049577 Ga0501041_0106055 Ga0501041_0106055_374_1630 390

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01969

Ni_insertion

Nickel insertion protein

53

429

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
6bwo-assembly1.cif.gz_A larc2, the c-terminal domain of a cyclometallase involved in the synthesis of the npn cofactor of lactate racemase, apo form 0.8824 240 375
6bwo-assembly1.cif.gz_A larc2, the c-terminal domain of a cyclometallase involved in the synthesis of the npn cofactor of lactate racemase, apo form 0.8314 240 375
5o3r-assembly1.cif.gz_A carbon regulatory pii-like protein sbtb from synechocystis sp. 6803 in complex with amp 0.7678 239 319
6mmq-assembly2.cif.gz_E carbon regulatory pii-like protein sbtb from cyanobium sp. 7001 bound to camp 0.7596 239 319
7egl-assembly1.cif.gz_B bicarbonate transporter complex sbta-sbtb bound to hco3- 0.7583 239 319
ID Description Score Start End Superfamily
af_Q58782_231_319_3.30.70.1380 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Transcriptional regulatory protein pf0864 domain like 0.9542 241 322 3.30.70.1380
3c19A01 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Transcriptional regulatory protein pf0864 domain like 0.8785 237 318 3.30.70.1380
af_Q58782_231_319_3.30.70.1380 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Transcriptional regulatory protein pf0864 domain like 0.862 241 322 3.30.70.1380
af_Q7XPW7_20_142_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.7802 243 292 3.40.50.150
af_P95087_118_229_3.30.70.120 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.7698 241 319 3.30.70.120
ID Description Score Start End GO Terms
AF-A0A095XS45-F1-model_v4 deleted 0.9826 242 380
AF-A0A351EXW5-F1-model_v4 TIGR00299 family protein 0.9744 241 319
AF-A0A7C7XI65-F1-model_v4 DUF111 family protein 0.9698 245 376
AF-A0A239U2L1-F1-model_v4 Protein of uncharacterized function DUF111 0.9689 240 379
AF-A0A096AME3-F1-model_v4 LarC family nickel insertion protein 0.963 240 366

Feature Viewer

pLDDT pTM Quality
84.81 0.57 Medium
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Predicted Structure (AlphaFold2)

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