F346960

General Info

Members Datasets Scaffolds Average Seq Length
234 138 234 317

Family's Representative Sequence

Representative Sequence 3300006051|Ga0075364_10217266|Ga0075364_102172661
Length 348
Sequence MAALIGKRDDKIRNITAIKRAARAAGSVEDVLAKVTKPLSGSSKLGGFPYRKPNVPRNAVVPKKPSKLLGDFETDWARKYPARMARVLLTEGPIRLFVKGLAAPRVKGLDRLEDLRNRKEPPVVIFTPNHHSHLDTPLSITAIPEPWRHKLIVAAAADYFFTSKPKGNAAALALNVIPIDRDATGRKSSDQIRDLMADGWSLLIYPEGGRSPDGWGQDFKGGAAYLSARTGAPVIPMFIDGTGPIFGKGMKRPKPGRTTIVFGNPLHPGTDENTRRFNSRIEAAVTLLGDESLTDYWTSRRNRAIGANPKLTGPEYNGWRREWRLTEQRQLGDMGIRRRQKRRWPDLG

Samples

Sample ID Description Type Environment
1 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
2 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
3 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
4 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
5 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
6 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
7 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
8 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
9 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
10 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
11 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
12 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
13 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
14 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
15 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
16 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
17 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
18 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
19 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
20 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
24 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
26 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
29 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
30 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
31 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
32 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
33 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
34 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
50 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
51 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
53 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
54 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
55 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
56 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
57 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
58 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
59 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
60 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
61 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
62 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
63 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
64 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
65 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
66 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
67 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
68 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
69 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
70 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
71 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
72 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
73 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
74 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
75 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
76 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
77 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
78 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
79 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
80 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
81 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
82 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
83 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
84 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
85 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
86 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
87 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
88 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
89 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
90 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
91 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
92 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
93 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
94 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
95 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
96 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
99 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
105 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
110 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
111 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
112 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
113 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
114 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
115 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
116 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
117 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
118 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
119 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
120 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
121 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
122 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
123 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
124 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
125 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
126 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
127 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
128 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
129 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
130 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
131 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
132 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
133 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
134 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
135 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
136 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
137 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
138 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.39
Nodule 0
Rhizoplane 4.7
Rhizosphere 81.62
Stem 0
Stem Tuber 0
Unclassified 1.28

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25407J50210_10002541 3300003373 Bacteria 4311
2 Ga0068868_100164682 3300005338 Bacteria 1833
3 Ga0070687_100048133 3300005343 Bacteria 2191
4 Ga0070673_100120740 3300005364 Bacteria 2186
5 Ga0070678_100060383 3300005456 Bacteria 2790
6 Ga0068867_100028288 3300005459 Bacteria 4036
7 Ga0068852_100097269 3300005616 Bacteria 2648
8 Ga0068866_10009192 3300005718 Bacteria 4188
9 Ga0068861_100362489 3300005719 Bacteria 1275
10 Ga0068860_100019311 3300005843 Bacteria 6614
11 Ga0068860_100041337 3300005843 Bacteria 4404
12 Ga0068860_100216003 3300005843 Bacteria 1861
13 Ga0081538_10000456 3300005981 Bacteria 45761
14 Ga0075365_10009066 3300006038 Bacteria 5692
15 Ga0075365_10047140 3300006038 Bacteria 2832
16 Ga0075365_10061019 3300006038 Bacteria 2517
17 Ga0075365_10126343 3300006038 Bacteria 1767
18 Ga0075365_10256266 3300006038 Bacteria 1230
19 Ga0075368_10049225 3300006042 Bacteria 1671
20 Ga0075363_100166667 3300006048 Bacteria 1249
21 Ga0075364_10024725 3300006051 Bacteria 3816
22 Ga0075364_10040527 3300006051 Bacteria 3021
23 Ga0075364_10089162 3300006051 Bacteria 2045
24 Ga0075364_10217266 3300006051 Bacteria 1297
25 Ga0075362_10060202 3300006177 Unclassified 1716
26 Ga0075367_10086739 3300006178 Bacteria 1900
27 Ga0068871_100257028 3300006358 Bacteria 1523
28 Ga0075428_100010101 3300006844 Bacteria 10485
29 Ga0075430_100126903 3300006846 Bacteria 2127
30 Ga0075430_100321075 3300006846 Bacteria 1280
31 Ga0075431_100006747 3300006847 Bacteria 11399
32 Ga0111539_10087747 3300009094 Bacteria 3654
33 Ga0111539_10105102 3300009094 Bacteria 3313
34 Ga0111539_10735303 3300009094 Unclassified 1149
35 Ga0105245_10080116 3300009098 Bacteria 2983
36 Ga0105245_10116444 3300009098 Bacteria 2492
37 Ga0105245_10310566 3300009098 Bacteria 1550
38 Ga0114129_10039707 3300009147 Bacteria 6637
39 Ga0114129_10512907 3300009147 Bacteria 1564
40 Ga0114129_10590807 3300009147 Bacteria 1440
41 Ga0105243_10070851 3300009148 Bacteria 2816
42 Ga0105243_10486460 3300009148 Bacteria 1166
43 Ga0105241_10361641 3300009174 Bacteria 1263
44 Ga0105248_10326626 3300009177 Bacteria 1728
45 Ga0105249_10013754 3300009553 Bacteria 7146
46 Ga0157378_10021045 3300013297 Bacteria 5737
47 Ga0157375_10176489 3300013308 Bacteria 2286
48 Ga0182008_10013283 3300014497 Bacteria 4330
49 Ga0157379_10013120 3300014968 Bacteria 7254
50 Ga0163161_10330914 3300017792 Bacteria 1206
51 Ga0207707_10001958 3300025912 Bacteria 18719
52 Ga0207662_10060990 3300025918 Bacteria 2263
53 Ga0207687_10317520 3300025927 Bacteria 1260
54 Ga0207664_10216426 3300025929 Bacteria 1659
55 Ga0207691_10174163 3300025940 Bacteria 1883
56 Ga0207712_10138519 3300025961 Bacteria 1864
57 Ga0207668_10046485 3300025972 Bacteria 2966
58 Ga0207658_10284145 3300025986 Bacteria 1420
59 Ga0207703_10069977 3300026035 Bacteria 2895
60 Ga0207678_10438864 3300026067 Bacteria 1134
61 Ga0207702_10475900 3300026078 Unclassified 1215
62 Ga0207702_10664964 3300026078 Bacteria 1025
63 Ga0207648_10005991 3300026089 Bacteria 12149
64 Ga0207675_100022741 3300026118 Bacteria 5833
65 Ga0207675_100023530 3300026118 Bacteria 5731
66 Ga0207675_100095418 3300026118 Bacteria 2798
67 Ga0207683_10126765 3300026121 Bacteria 2294
68 Ga0207698_10067453 3300026142 Bacteria 2821
69 Ga0209813_10007134 3300027866 Bacteria 2776
70 Ga0207428_10049501 3300027907 Bacteria 3367
71 Ga0268264_10071267 3300028381 Bacteria 2944
72 Ga0265338_10080847 3300028800 Bacteria 2729
73 Ga0316576_10001163 3300031727 Bacteria 13786
74 Ga0316576_10010388 3300031727 Bacteria 6047
75 Ga0316576_10013371 3300031727 Bacteria 5453
76 Ga0316576_10156511 3300031727 Bacteria 1718
77 Ga0316578_10034865 3300031728 Bacteria 2891
78 Ga0316578_10061910 3300031728 Bacteria 2205
79 Ga0307410_10024823 3300031852 Bacteria 3751
80 Ga0307416_100023147 3300032002 Bacteria 4503
81 Ga0307415_100055413 3300032126 Bacteria 2713
82 Ga0373930_0002744 3300034816 Bacteria 2747
83 Ga0373948_0001783 3300034817 Bacteria 3061
84 Ga0373932_0000434 3300035112 Bacteria 12776
85 Ga0373932_0020032 3300035112 Bacteria 1750
86 Ga0316574_0038547 3300035398 Bacteria 2934
87 Ga0316574_0200138 3300035398 Bacteria 1283
88 Ga0373931_0000005 3300035691 Bacteria 480485
89 Ga0373937_0112007 3300036401 Bacteria 2538
90 Ga0316582_0083048 3300036647 Bacteria 2095
91 Ga0316584_0044110 3300036712 Bacteria 3325
92 Ga0436364_0693244 3300037853 Bacteria 1897
93 Ga0436364_0860380 3300037853 Bacteria 1725
94 Ga0439465_0010961 3300041413 Bacteria 2845
95 Ga0451853_2834780 3300041512 Bacteria 1134
96 Ga0439463_001588 3300042016 Bacteria 5994
97 Ga0439460_0034079 3300042461 Bacteria 1466
98 Ga0451577_0020318 3300042876 Bacteria 6096
99 Ga0453684_0013878 3300044712 Bacteria 12997
100 Ga0495592_0359078 3300046454 Bacteria 932
101 Ga0495629_0235691 3300046459 Bacteria 1261
102 Ga0495641_0058296 3300046461 Bacteria 1747
103 Ga0495630_0049371 3300046517 Bacteria 3150
104 Ga0495640_0078583 3300046533 Bacteria 2198
105 Ga0495667_0001959 3300046559 Bacteria 13621
106 Ga0495667_0385116 3300046559 Bacteria 884
107 Ga0495634_0013027 3300046642 Bacteria 6015
108 Ga0495635_0065581 3300046663 Bacteria 2491
109 Ga0495657_0049582 3300046675 Bacteria 2827
110 Ga0495623_0049245 3300046679 Bacteria 2671
111 Ga0495613_0000619 3300046689 Bacteria 28272
112 Ga0495604_0449474 3300047317 Bacteria 842
113 Ga0495672_0002067 3300047320 Bacteria 18849
114 Ga0495680_0203966 3300047322 Bacteria 1417
115 Ga0495602_0021476 3300048088 Bacteria 6353
116 Ga0496100_0087509 3300048903 Bacteria 2118
117 Ga0496104_0014480 3300048907 Bacteria 7124
118 Ga0496104_0140871 3300048907 Bacteria 2316
119 Ga0496105_0046854 3300048908 Bacteria 3568
120 Ga0496105_0061441 3300048908 Bacteria 3100
121 Ga0496106_0035004 3300048909 Bacteria 3754
122 Ga0496108_0375850 3300048911 Bacteria 1241
123 Ga0496110_0011582 3300048913 Bacteria 7229
124 Ga0496110_0056603 3300048913 Bacteria 3451
125 Ga0496111_0365573 3300048914 Bacteria 1068
126 Ga0496114_0052656 3300048917 Bacteria 3391
127 Ga0501031_0223554 3300049568 Bacteria 1226
128 Ga0501034_0000034 3300049571 Bacteria 242608
129 Ga0501034_0000313 3300049571 Bacteria 86110
130 Ga0501034_0017797 3300049571 Bacteria 7290
131 Ga0501034_0023677 3300049571 Bacteria 6253
132 Ga0501034_0047368 3300049571 Bacteria 4341
133 Ga0501036_0095623 3300049572 Bacteria 2511
134 Ga0501036_0111342 3300049572 Bacteria 2313
135 Ga0501036_0193106 3300049572 Bacteria 1713
136 Ga0501037_0007872 3300049573 Bacteria 7808
137 Ga0501038_0210364 3300049574 Bacteria 1556
138 Ga0501038_0216710 3300049574 Bacteria 1529
139 Ga0501038_0275085 3300049574 Bacteria 1327
140 Ga0501038_0437077 3300049574 Unclassified 1008
141 Ga0501039_0202512 3300049575 Unclassified 1561
142 Ga0501040_0008854 3300049576 Bacteria 6541
143 Ga0501040_0135812 3300049576 Bacteria 1731
144 Ga0501040_0146609 3300049576 Bacteria 1664
145 Ga0501040_0310667 3300049576 Bacteria 1127
146 Ga0501041_0015858 3300049577 Bacteria 4478
147 Ga0501041_0033956 3300049577 Bacteria 3088
148 Ga0501041_0128457 3300049577 Bacteria 1579
149 Ga0501042_0001634 3300049578 Bacteria 13341
150 Ga0501042_0019240 3300049578 Bacteria 4739
151 Ga0501042_0317257 3300049578 Bacteria 1126
152 Ga0501043_0198747 3300049579 Bacteria 1557
153 Ga0501046_0006322 3300049580 Bacteria 10502
154 Ga0501046_0130228 3300049580 Bacteria 1909
155 Ga0501046_0150085 3300049580 Bacteria 1759
156 Ga0501046_0159580 3300049580 Bacteria 1697
157 Ga0501047_0147648 3300049581 Bacteria 2228
158 Ga0501048_0046566 3300049582 Bacteria 3096
159 Ga0501048_0134892 3300049582 Bacteria 1744
160 Ga0501067_0076323 3300049583 Bacteria 1857
161 Ga0501068_0009433 3300049584 Bacteria 5461
162 Ga0501068_0124894 3300049584 Bacteria 1606
163 Ga0501068_0129990 3300049584 Bacteria 1575
164 Ga0501069_0000133 3300049585 Bacteria 32469
165 Ga0501069_0035440 3300049585 Bacteria 2750
166 Ga0501069_0086916 3300049585 Bacteria 1765
167 Ga0501070_0000092 3300049586 Bacteria 76642
168 Ga0501070_0011291 3300049586 Bacteria 7546
169 Ga0501070_0237299 3300049586 Bacteria 1493
170 Ga0501071_0036929 3300049587 Bacteria 3486
171 Ga0501071_0042537 3300049587 Bacteria 3256
172 Ga0501071_0042948 3300049587 Bacteria 3240
173 Ga0501071_0050050 3300049587 Bacteria 3009
174 Ga0501071_0131811 3300049587 Bacteria 1857
175 Ga0501071_0190244 3300049587 Bacteria 1539
176 Ga0501072_0000953 3300049588 Bacteria 21320
177 Ga0501072_0001566 3300049588 Bacteria 17086
178 Ga0501072_0024282 3300049588 Bacteria 4714
179 Ga0501073_0002862 3300049589 Bacteria 12925
180 Ga0501073_0008336 3300049589 Bacteria 7687
181 Ga0501074_0001035 3300049590 Bacteria 18056
182 Ga0501074_0077469 3300049590 Bacteria 2386
183 Ga0501075_0044983 3300049591 Bacteria 3312
184 Ga0501076_0016867 3300049592 Bacteria 5545
185 Ga0501076_0120828 3300049592 Bacteria 2121
186 Ga0501076_0252867 3300049592 Unclassified 1442
187 Ga0501077_0065635 3300049593 Bacteria 2301
188 Ga0501077_0067782 3300049593 Bacteria 2262
189 Ga0501080_0016815 3300049742 Bacteria 6755
190 Ga0501080_0035661 3300049742 Bacteria 4642
191 Ga0501081_0006404 3300049743 Bacteria 7640
192 Ga0501081_0186815 3300049743 Bacteria 1500
193 Ga0501083_0002001 3300049744 Bacteria 14025
194 Ga0501083_0059369 3300049744 Bacteria 2559
195 Ga0501083_0099338 3300049744 Bacteria 1920
196 Ga0501083_0125589 3300049744 Bacteria 1682
197 Ga0501045_0009293 3300049824 Bacteria 6877
198 Ga0501045_0034146 3300049824 Bacteria 3691
199 Ga0501045_0057149 3300049824 Bacteria 2855
200 Ga0501045_0091163 3300049824 Bacteria 2253
201 Ga0501045_0159991 3300049824 Bacteria 1676
202 nmdc:mga03n38_62056_c1 3300050490 Bacteria 1704
203 nmdc:mga00v17_148896_c1 3300050491 Bacteria 1503
204 nmdc:mga00v17_27389_c1 3300050491 Bacteria 3327
205 nmdc:mga00v17_27892_c1 3300050491 Bacteria 3301
206 nmdc:mga00v17_34755_c1 3300050491 Bacteria 2996
207 nmdc:mga00v17_355448_c1 3300050491 Bacteria 952
208 nmdc:mga0yw44_1695_c1 3300050492 Bacteria 8925
209 nmdc:mga0yw44_18288_c1 3300050492 Bacteria 3833
210 nmdc:mga0yw44_200580_c1 3300050492 Bacteria 1317
211 nmdc:mga0yw44_29402_c1 3300050492 Bacteria 3173
212 nmdc:mga0yw44_41479_c1 3300050492 Bacteria 2740
213 nmdc:mga06z11_191020_c1 3300050494 Bacteria 1185
214 nmdc:mga05p37_179143_c1 3300050507 Bacteria 2580
215 nmdc:mga09592_236763_c1 3300050508 Bacteria 1582
216 nmdc:mga0qj67_298959_c1 3300050509 Bacteria 1304
217 nmdc:mga0qj67_63864_c1 3300050509 Bacteria 2928
218 nmdc:mga06r32_222076_c1 3300050510 Bacteria 1878
219 nmdc:mga06r32_493988_c1 3300050510 Bacteria 1201
220 nmdc:mga08y16_118536_c1 3300050511 Bacteria 2755
221 Ga0495619_0030591 3300053085 Bacteria 3485
222 Ga0500568_0000085 3300053139 Bacteria 91299
223 Ga0500616_0000477 3300053153 Bacteria 51936
224 Ga0500616_0007059 3300053153 Bacteria 7207
225 Ga0501084_0001926 3300054114 Bacteria 16571
226 Ga0501084_0012349 3300054114 Bacteria 7075
227 Ga0501084_0051738 3300054114 Bacteria 3438
228 Ga0501084_0110706 3300054114 Bacteria 2307
229 Ga0501084_0239039 3300054114 Bacteria 1533
230 Ga0501084_0402508 3300054114 Unclassified 1157
231 Ga0501082_0119001 3300060353 Bacteria 2289
232 Ga0501082_0189068 3300060353 Bacteria 1791
233 Ga0530510_0000744 3300061734 Bacteria 21103
234 Ga0530510_0002482 3300061734 Bacteria 12667

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300006038 Ga0075365_10009066 Ga0075365_100090663 233
2 3300050492 nmdc:mga0yw44_41479_c1 nmdc:mga0yw44_41479_c1_813_1547 233
3 3300046559 Ga0495667_0385116 Ga0495667_0385116_63_854 247
4 3300047317 Ga0495604_0449474 Ga0495604_0449474_19_810 247
5 3300049585 Ga0501069_0086916 Ga0501069_0086916_150_902 250
6 3300049572 Ga0501036_0193106 Ga0501036_0193106_22_1026 260
7 3300049574 Ga0501038_0210364 Ga0501038_0210364_251_1255 260
8 3300049576 Ga0501040_0008854 Ga0501040_0008854_626_1660 260
9 3300049578 Ga0501042_0019240 Ga0501042_0019240_520_1554 260
10 3300049580 Ga0501046_0150085 Ga0501046_0150085_402_1406 260
11 3300049582 Ga0501048_0046566 Ga0501048_0046566_827_1861 260
12 3300049588 Ga0501072_0024282 Ga0501072_0024282_27_1061 260
13 3300049592 Ga0501076_0120828 Ga0501076_0120828_954_1958 260
14 3300049593 Ga0501077_0065635 Ga0501077_0065635_262_1266 260
15 3300049743 Ga0501081_0006404 Ga0501081_0006404_455_1489 260
16 3300049744 Ga0501083_0099338 Ga0501083_0099338_726_1760 260
17 3300049824 Ga0501045_0009293 Ga0501045_0009293_5349_6353 260
18 3300054114 Ga0501084_0012349 Ga0501084_0012349_5691_6695 260
19 3300061734 Ga0530510_0002482 Ga0530510_0002482_6529_7563 260
20 3300035112 Ga0373932_0020032 Ga0373932_0020032_882_1733 263
21 3300036712 Ga0316584_0044110 Ga0316584_0044110_48_902 265
22 3300049571 Ga0501034_0000034 Ga0501034_0000034_132377_133279 269
23 3300049573 Ga0501037_0007872 Ga0501037_0007872_6061_6963 269
24 3300049575 Ga0501039_0202512 Ga0501039_0202512_16_879 269
25 3300049584 Ga0501068_0009433 Ga0501068_0009433_3430_4332 269
26 3300049586 Ga0501070_0237299 Ga0501070_0237299_324_1226 269
27 3300049588 Ga0501072_0001566 Ga0501072_0001566_13070_13972 269
28 3300049589 Ga0501073_0008336 Ga0501073_0008336_3483_4385 269
29 3300049590 Ga0501074_0001035 Ga0501074_0001035_6480_7382 269
30 3300025929 Ga0207664_10216426 Ga0207664_102164262 270
31 3300049574 Ga0501038_0437077 Ga0501038_0437077_42_932 272
32 3300050491 nmdc:mga00v17_355448_c1 nmdc:mga00v17_355448_c1_87_938 272
33 3300049744 Ga0501083_0002001 Ga0501083_0002001_3406_4314 273
34 3300031727 Ga0316576_10013371 Ga0316576_100133714 275
35 3300031852 Ga0307410_10024823 Ga0307410_100248233 275
36 3300032002 Ga0307416_100023147 Ga0307416_1000231473 275
37 3300050510 nmdc:mga06r32_493988_c1 nmdc:mga06r32_493988_c1_323_1183 275
38 3300034817 Ga0373948_0001783 Ga0373948_0001783_645_1547 276
39 3300046454 Ga0495592_0359078 Ga0495592_0359078_44_922 276
40 3300005843 Ga0068860_100019311 Ga0068860_1000193113 277
41 3300025912 Ga0207707_10001958 Ga0207707_100019585 278
42 3300026078 Ga0207702_10475900 Ga0207702_104759001 278
43 3300026078 Ga0207702_10664964 Ga0207702_106649641 278
44 3300026121 Ga0207683_10126765 Ga0207683_101267652 279
45 3300037853 Ga0436364_0860380 Ga0436364_0860380_651_1667 280
46 3300048914 Ga0496111_0365573 Ga0496111_0365573_52_1032 280
47 3300050490 nmdc:mga03n38_62056_c1 nmdc:mga03n38_62056_c1_45_986 280
48 3300050492 nmdc:mga0yw44_200580_c1 nmdc:mga0yw44_200580_c1_37_918 280
49 3300005843 Ga0068860_100041337 Ga0068860_1000413372 283
50 3300006038 Ga0075365_10047140 Ga0075365_100471403 283
51 3300006042 Ga0075368_10049225 Ga0075368_100492252 283
52 3300006051 Ga0075364_10089162 Ga0075364_100891622 283
53 3300006177 Ga0075362_10060202 Ga0075362_100602022 283
54 3300006178 Ga0075367_10086739 Ga0075367_100867392 283
55 3300027866 Ga0209813_10007134 Ga0209813_100071342 283
56 3300028381 Ga0268264_10071267 Ga0268264_100712673 283
57 3300050491 nmdc:mga00v17_27892_c1 nmdc:mga00v17_27892_c1_1516_2550 283
58 3300050492 nmdc:mga0yw44_29402_c1 nmdc:mga0yw44_29402_c1_1378_2412 283
59 3300014497 Ga0182008_10013283 Ga0182008_100132833 284
60 3300037853 Ga0436364_0693244 Ga0436364_0693244_701_1609 284
61 3300046517 Ga0495630_0049371 Ga0495630_0049371_1125_2069 284
62 3300046533 Ga0495640_0078583 Ga0495640_0078583_1234_2178 284
63 3300046642 Ga0495634_0013027 Ga0495634_0013027_2381_3325 284
64 3300046689 Ga0495613_0000619 Ga0495613_0000619_1256_2200 284
65 3300006038 Ga0075365_10061019 Ga0075365_100610192 285
66 3300009098 Ga0105245_10080116 Ga0105245_100801162 285
67 3300009098 Ga0105245_10116444 Ga0105245_101164443 285
68 3300025927 Ga0207687_10317520 Ga0207687_103175201 285
69 3300034816 Ga0373930_0002744 Ga0373930_0002744_325_1227 285
70 3300035112 Ga0373932_0000434 Ga0373932_0000434_500_1402 285
71 3300035691 Ga0373931_0000005 Ga0373931_0000005_268847_269749 285
72 3300050492 nmdc:mga0yw44_18288_c1 nmdc:mga0yw44_18288_c1_1529_2440 285
73 3300006038 Ga0075365_10256266 Ga0075365_102562662 287
74 3300009148 Ga0105243_10486460 Ga0105243_104864601 289
75 3300005364 Ga0070673_100120740 Ga0070673_1001207403 290
76 3300005719 Ga0068861_100362489 Ga0068861_1003624892 290
77 3300009094 Ga0111539_10105102 Ga0111539_101051022 290
78 3300009094 Ga0111539_10735303 Ga0111539_107353031 290
79 3300009147 Ga0114129_10039707 Ga0114129_100397075 290
80 3300025940 Ga0207691_10174163 Ga0207691_101741631 290
81 3300049574 Ga0501038_0275085 Ga0501038_0275085_177_1121 290
82 3300049587 Ga0501071_0042948 Ga0501071_0042948_130_1149 290
83 3300049824 Ga0501045_0159991 Ga0501045_0159991_356_1375 290
84 3300050507 nmdc:mga05p37_179143_c1 nmdc:mga05p37_179143_c1_657_1565 290
85 3300050508 nmdc:mga09592_236763_c1 nmdc:mga09592_236763_c1_17_925 290
86 3300054114 Ga0501084_0051738 Ga0501084_0051738_1775_2794 290
87 3300054114 Ga0501084_0402508 Ga0501084_0402508_172_1116 290
88 3300005338 Ga0068868_100164682 Ga0068868_1001646823 291
89 3300005343 Ga0070687_100048133 Ga0070687_1000481331 291
90 3300005459 Ga0068867_100028288 Ga0068867_1000282883 291
91 3300005616 Ga0068852_100097269 Ga0068852_1000972692 291
92 3300005718 Ga0068866_10009192 Ga0068866_100091922 291
93 3300006038 Ga0075365_10126343 Ga0075365_101263432 291
94 3300006358 Ga0068871_100257028 Ga0068871_1002570282 291
95 3300009098 Ga0105245_10310566 Ga0105245_103105662 291
96 3300009147 Ga0114129_10590807 Ga0114129_105908072 291
97 3300009148 Ga0105243_10070851 Ga0105243_100708512 291
98 3300013297 Ga0157378_10021045 Ga0157378_100210454 291
99 3300013308 Ga0157375_10176489 Ga0157375_101764891 291
100 3300014968 Ga0157379_10013120 Ga0157379_100131208 291
101 3300017792 Ga0163161_10330914 Ga0163161_103309142 291
102 3300025918 Ga0207662_10060990 Ga0207662_100609902 291
103 3300025986 Ga0207658_10284145 Ga0207658_102841452 291
104 3300026067 Ga0207678_10438864 Ga0207678_104388641 291
105 3300026089 Ga0207648_10005991 Ga0207648_100059919 291
106 3300026118 Ga0207675_100022741 Ga0207675_1000227412 291
107 3300026118 Ga0207675_100023530 Ga0207675_1000235304 291
108 3300026118 Ga0207675_100095418 Ga0207675_1000954182 291
109 3300026142 Ga0207698_10067453 Ga0207698_100674532 291
110 3300031727 Ga0316576_10001163 Ga0316576_100011632 291
111 3300031727 Ga0316576_10010388 Ga0316576_100103884 291
112 3300031727 Ga0316576_10156511 Ga0316576_101565112 291
113 3300031728 Ga0316578_10034865 Ga0316578_100348651 291
114 3300041413 Ga0439465_0010961 Ga0439465_0010961_1836_2831 291
115 3300042461 Ga0439460_0034079 Ga0439460_0034079_300_1295 291
116 3300046461 Ga0495641_0058296 Ga0495641_0058296_376_1371 291
117 3300047320 Ga0495672_0002067 Ga0495672_0002067_16922_17836 291
118 3300048903 Ga0496100_0087509 Ga0496100_0087509_532_1551 291
119 3300048907 Ga0496104_0014480 Ga0496104_0014480_1437_2456 291
120 3300048908 Ga0496105_0061441 Ga0496105_0061441_133_1152 291
121 3300048909 Ga0496106_0035004 Ga0496106_0035004_1431_2450 291
122 3300048911 Ga0496108_0375850 Ga0496108_0375850_118_1137 291
123 3300048913 Ga0496110_0056603 Ga0496110_0056603_358_1377 291
124 3300048917 Ga0496114_0052656 Ga0496114_0052656_1805_2824 291
125 3300049568 Ga0501031_0223554 Ga0501031_0223554_208_1200 291
126 3300049577 Ga0501041_0033956 Ga0501041_0033956_570_1613 291
127 3300049577 Ga0501041_0128457 Ga0501041_0128457_45_959 291
128 3300049578 Ga0501042_0317257 Ga0501042_0317257_96_1091 291
129 3300049584 Ga0501068_0129990 Ga0501068_0129990_527_1519 291
130 3300049585 Ga0501069_0035440 Ga0501069_0035440_247_1176 291
131 3300049586 Ga0501070_0011291 Ga0501070_0011291_3377_4285 291
132 3300049587 Ga0501071_0050050 Ga0501071_0050050_539_1447 291
133 3300049587 Ga0501071_0131811 Ga0501071_0131811_31_1026 291
134 3300049589 Ga0501073_0002862 Ga0501073_0002862_9268_10176 291
135 3300049590 Ga0501074_0077469 Ga0501074_0077469_1112_2107 291
136 3300049742 Ga0501080_0035661 Ga0501080_0035661_669_1577 291
137 3300049744 Ga0501083_0059369 Ga0501083_0059369_1586_2494 291
138 3300049824 Ga0501045_0057149 Ga0501045_0057149_1644_2558 291
139 3300050494 nmdc:mga06z11_191020_c1 nmdc:mga06z11_191020_c1_31_1026 291
140 3300054114 Ga0501084_0001926 Ga0501084_0001926_9119_10027 291
141 3300060353 Ga0501082_0119001 Ga0501082_0119001_309_1352 291
142 3300005843 Ga0068860_100216003 Ga0068860_1002160032 292
143 3300006051 Ga0075364_10217266 Ga0075364_102172661 292
144 3300009553 Ga0105249_10013754 Ga0105249_100137545 292
145 3300025961 Ga0207712_10138519 Ga0207712_101385191 292
146 3300025972 Ga0207668_10046485 Ga0207668_100464851 292
147 3300036401 Ga0373937_0112007 Ga0373937_0112007_1492_2496 292
148 3300041512 Ga0451853_2834780 Ga0451853_2834780_104_1066 292
149 3300042876 Ga0451577_0020318 Ga0451577_0020318_2027_3079 292
150 3300044712 Ga0453684_0013878 Ga0453684_0013878_5184_6236 292
151 3300046559 Ga0495667_0001959 Ga0495667_0001959_2649_3653 292
152 3300046663 Ga0495635_0065581 Ga0495635_0065581_119_1123 292
153 3300046675 Ga0495657_0049582 Ga0495657_0049582_451_1455 292
154 3300046679 Ga0495623_0049245 Ga0495623_0049245_955_1959 292
155 3300047322 Ga0495680_0203966 Ga0495680_0203966_229_1233 292
156 3300048088 Ga0495602_0021476 Ga0495602_0021476_1629_2633 292
157 3300049571 Ga0501034_0017797 Ga0501034_0017797_6200_7225 292
158 3300049572 Ga0501036_0095623 Ga0501036_0095623_528_1541 292
159 3300049576 Ga0501040_0310667 Ga0501040_0310667_103_1116 292
160 3300049580 Ga0501046_0159580 Ga0501046_0159580_53_1066 292
161 3300049583 Ga0501067_0076323 Ga0501067_0076323_320_1321 292
162 3300049587 Ga0501071_0036929 Ga0501071_0036929_829_1842 292
163 3300049743 Ga0501081_0186815 Ga0501081_0186815_197_1216 292
164 3300050491 nmdc:mga00v17_148896_c1 nmdc:mga00v17_148896_c1_136_1182 292
165 3300050492 nmdc:mga0yw44_1695_c1 nmdc:mga0yw44_1695_c1_7572_8618 292
166 3300053153 Ga0500616_0000477 Ga0500616_0000477_31524_32546 292
167 3300049571 Ga0501034_0000313 Ga0501034_0000313_54000_54974 293
168 3300049571 Ga0501034_0023677 Ga0501034_0023677_3554_4528 293
169 3300049571 Ga0501034_0047368 Ga0501034_0047368_2341_3306 293
170 3300053085 Ga0495619_0030591 Ga0495619_0030591_104_1033 293
171 3300053139 Ga0500568_0000085 Ga0500568_0000085_15698_16642 293
172 3300053153 Ga0500616_0007059 Ga0500616_0007059_6220_7134 293
173 3300006048 Ga0075363_100166667 Ga0075363_1001666672 294
174 3300006051 Ga0075364_10024725 Ga0075364_100247252 294
175 3300006051 Ga0075364_10040527 Ga0075364_100405272 294
176 3300006846 Ga0075430_100321075 Ga0075430_1003210752 294
177 3300028800 Ga0265338_10080847 Ga0265338_100808472 294
178 3300031728 Ga0316578_10061910 Ga0316578_100619102 294
179 3300032126 Ga0307415_100055413 Ga0307415_1000554133 294
180 3300035398 Ga0316574_0038547 Ga0316574_0038547_1176_2177 294
181 3300035398 Ga0316574_0200138 Ga0316574_0200138_63_1061 294
182 3300036647 Ga0316582_0083048 Ga0316582_0083048_15_1016 294
183 3300049581 Ga0501047_0147648 Ga0501047_0147648_340_1335 294
184 3300049585 Ga0501069_0000133 Ga0501069_0000133_8499_9530 294
185 3300049586 Ga0501070_0000092 Ga0501070_0000092_19684_20715 294
186 3300049587 Ga0501071_0190244 Ga0501071_0190244_475_1506 294
187 3300049742 Ga0501080_0016815 Ga0501080_0016815_93_1124 294
188 3300050491 nmdc:mga00v17_27389_c1 nmdc:mga00v17_27389_c1_1927_2946 294
189 3300050491 nmdc:mga00v17_34755_c1 nmdc:mga00v17_34755_c1_1554_2552 294
190 3300050509 nmdc:mga0qj67_298959_c1 nmdc:mga0qj67_298959_c1_130_1098 294
191 3300005456 Ga0070678_100060383 Ga0070678_1000603833 295
192 3300006844 Ga0075428_100010101 Ga0075428_1000101012 295
193 3300006846 Ga0075430_100126903 Ga0075430_1001269032 295
194 3300006847 Ga0075431_100006747 Ga0075431_1000067474 295
195 3300046459 Ga0495629_0235691 Ga0495629_0235691_64_1008 295
196 3300050509 nmdc:mga0qj67_63864_c1 nmdc:mga0qj67_63864_c1_1872_2813 295
197 3300050510 nmdc:mga06r32_222076_c1 nmdc:mga06r32_222076_c1_926_1867 295
198 3300009174 Ga0105241_10361641 Ga0105241_103616412 296
199 3300009177 Ga0105248_10326626 Ga0105248_103266262 296
200 3300026035 Ga0207703_10069977 Ga0207703_100699772 296
201 3300048907 Ga0496104_0140871 Ga0496104_0140871_1151_2188 296
202 3300048908 Ga0496105_0046854 Ga0496105_0046854_1144_2181 296
203 3300048913 Ga0496110_0011582 Ga0496110_0011582_3614_4651 296
204 3300049576 Ga0501040_0146609 Ga0501040_0146609_172_1215 296
205 3300049580 Ga0501046_0130228 Ga0501046_0130228_543_1586 296
206 3300049592 Ga0501076_0252867 Ga0501076_0252867_140_1183 296
207 3300049824 Ga0501045_0091163 Ga0501045_0091163_329_1372 296
208 3300054114 Ga0501084_0239039 Ga0501084_0239039_321_1364 296
209 3300009094 Ga0111539_10087747 Ga0111539_100877473 298
210 3300027907 Ga0207428_10049501 Ga0207428_100495012 298
211 3300050511 nmdc:mga08y16_118536_c1 nmdc:mga08y16_118536_c1_1807_2736 298
212 3300003373 JGI25407J50210_10002541 JGI25407J50210_100025413 299
213 3300005981 Ga0081538_10000456 Ga0081538_1000045638 299
214 3300009147 Ga0114129_10512907 Ga0114129_105129072 299
215 3300042016 Ga0439463_001588 Ga0439463_001588_3924_4856 299
216 3300049572 Ga0501036_0111342 Ga0501036_0111342_856_1788 299
217 3300049574 Ga0501038_0216710 Ga0501038_0216710_189_1121 299
218 3300049576 Ga0501040_0135812 Ga0501040_0135812_526_1458 299
219 3300049577 Ga0501041_0015858 Ga0501041_0015858_272_1204 299
220 3300049578 Ga0501042_0001634 Ga0501042_0001634_11839_12771 299
221 3300049579 Ga0501043_0198747 Ga0501043_0198747_80_1012 299
222 3300049580 Ga0501046_0006322 Ga0501046_0006322_3197_4129 299
223 3300049582 Ga0501048_0134892 Ga0501048_0134892_281_1213 299
224 3300049584 Ga0501068_0124894 Ga0501068_0124894_48_980 299
225 3300049587 Ga0501071_0042537 Ga0501071_0042537_1945_2877 299
226 3300049588 Ga0501072_0000953 Ga0501072_0000953_16183_17115 299
227 3300049591 Ga0501075_0044983 Ga0501075_0044983_1852_2784 299
228 3300049592 Ga0501076_0016867 Ga0501076_0016867_33_965 299
229 3300049593 Ga0501077_0067782 Ga0501077_0067782_346_1278 299
230 3300049744 Ga0501083_0125589 Ga0501083_0125589_695_1627 299
231 3300049824 Ga0501045_0034146 Ga0501045_0034146_1995_2927 299
232 3300054114 Ga0501084_0110706 Ga0501084_0110706_501_1433 299
233 3300060353 Ga0501082_0189068 Ga0501082_0189068_309_1241 299
234 3300061734 Ga0530510_0000744 Ga0530510_0000744_19757_20689 299

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01553

Acyltransferase

Acyltransferase

105

240

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
5kym-assembly2.cif.gz_B crystal structure of the 1-acyl-sn-glycerophosphate (lpa) acyltransferase, plsc, from thermotoga maritima 0.7964 42 259
5kym-assembly1.cif.gz_A crystal structure of the 1-acyl-sn-glycerophosphate (lpa) acyltransferase, plsc, from thermotoga maritima 0.7963 42 264
1iuq-assembly1.cif.gz_A the 1.55 a crystal structure of glycerol-3-phosphate acyltransferase 0.7076 75 267
1k30-assembly1.cif.gz_A crystal structure analysis of squash (cucurbita moschata) glycerol-3-phosphate (1)-acyltransferase 0.7005 75 267
5kym-assembly1.cif.gz_A crystal structure of the 1-acyl-sn-glycerophosphate (lpa) acyltransferase, plsc, from thermotoga maritima 0.6787 42 264
ID Description Score Start End Superfamily
af_Q2FXJ7_19_144_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8853 90 206 3.40.50.2000
af_P31119_15_138_3.40.1010.10 Alpha Beta;3-Layer(aba) Sandwich;Cobalt-precorrin-4 Transmethylase; domain 1;Tetrapyrrole methylase, N-terminal domain 0.8505 90 206 3.40.1010.10
af_Q93841_73_201_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8367 90 206 3.40.50.620
af_I6YDI9_312_439_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8343 89 206 3.40.50.620
af_Q94F16_113_260_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8282 77 200 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A7W1TXK7-F1-model_v4 1-acyl-sn-glycerol-3-phosphate acyltransferase 0.9771 28 262 GO:0003841
GO:0006654
AF-A0A7W1TXK7-F1-model_v4 1-acyl-sn-glycerol-3-phosphate acyltransferase 0.9729 28 262 GO:0003841
GO:0006654
AF-A0A535D5B8-F1-model_v4 1-acyl-sn-glycerol-3-phosphate acyltransferase 0.9586 47 256 GO:0003841
GO:0006654
AF-A0A7V9J1L7-F1-model_v4 1-acyl-sn-glycerol-3-phosphate acyltransferase 0.9481 40 256 GO:0003841
GO:0006654
AF-A0A7W0LQU2-F1-model_v4 1-acyl-sn-glycerol-3-phosphate acyltransferase 0.9464 64 253 GO:0003841
GO:0006654

Feature Viewer

pLDDT pTM Quality
83.26 0.81 High
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Predicted Structure (AlphaFold2)

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