F346725

General Info

Members Datasets Scaffolds Average Seq Length
234 142 468 301

Family's Representative Sequence

Representative Sequence 3300005295|Ga0065707_10084573|Ga0065707_100845738
Length 341
Sequence MTRKRSPGISIPRSETDPSQVAAGTSPSVKADTLAQSSTPPSRTAPFALRPLSRLLREPLLHFLLLGAALFAVYQWYGTAGGVGGETSRQIQLTLDDVRTMVAYFESQWRRPPTPEELHRMVENKVQEEVLYREALAMGLDKDDTIVKRRMAQKMQFLAEDVAAAHEPTPEELKSWYESNRQKFSLPARITFRQLYFSPDRRGERTRQEAEKALGRLAGQGVDSKLATTLSDPFMLQDYYGDRASDQVAKEFGPVFAQSVFQVKAGSWQGPIESGYGWHLVFVDSIVPGRSPNLAEVEQDVKTAWLAEQKEEAWRKAYDAMRAKYTVLIPGPPDAAAPGTQ

Samples

Sample ID Description Type Environment
1 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
16 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
34 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
38 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
42 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
51 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
56 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
57 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
85 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
89 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
90 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
91 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
92 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
93 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
94 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
95 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
96 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
97 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
98 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
99 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
100 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
101 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
102 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
103 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
104 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
105 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
106 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
107 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
108 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
109 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
110 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
111 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
112 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
113 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
114 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
115 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
116 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
117 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
118 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
119 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
120 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
121 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
122 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
123 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
124 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
125 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
126 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
127 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
128 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
129 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
130 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
131 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
132 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
133 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
134 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
135 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
136 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
137 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
138 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
139 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
140 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
141 2513237137 Bradyrhizobium elkanii USDA 94 Isolate Nodule
142 2582581306 Rhizobium sp. YR295 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.15
Metatranscriptomes 0
Isolates 0.85

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.43
Nodule 0.43
Rhizoplane 0
Rhizosphere 98.72
Stem 0
Stem Tuber 0
Unclassified 17.95

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065707_10084573 3300005295 Bacteria 7047
2 Ga0070676_10244304 3300005328 Bacteria 1195
3 Ga0070690_100152188 3300005330 Unclassified 1579
4 Ga0070670_100040162 3300005331 Bacteria 4024
5 Ga0070670_100298654 3300005331 Bacteria 1408
6 Ga0070670_100329321 3300005331 Bacteria 1339
7 Ga0070666_10289114 3300005335 Bacteria 1166
8 Ga0068868_100252232 3300005338 Bacteria 1485
9 Ga0070689_100196957 3300005340 Bacteria 1643
10 Ga0070692_10048574 3300005345 Unclassified 2199
11 Ga0070668_100024577 3300005347 Bacteria 4565
12 Ga0070668_100057549 3300005347 Bacteria 3005
13 Ga0070669_100012879 3300005353 Bacteria 5941
14 Ga0070669_100029938 3300005353 Bacteria 3926
15 Ga0070669_100202104 3300005353 Unclassified 1564
16 Ga0070675_100000733 3300005354 Bacteria 22863
17 Ga0070675_100041156 3300005354 Bacteria 3774
18 Ga0070675_100447169 3300005354 Unclassified 1159
19 Ga0070674_100025911 3300005356 Bacteria 3823
20 Ga0070688_100281967 3300005365 Unclassified 1194
21 Ga0070667_100212493 3300005367 Unclassified 1720
22 Ga0070667_100292836 3300005367 Unclassified 1464
23 Ga0070694_100001965 3300005444 Bacteria 12186
24 Ga0070694_100556041 3300005444 Bacteria 919
25 Ga0070708_100000604 3300005445 Bacteria 27021
26 Ga0070678_100089798 3300005456 Bacteria 2353
27 Ga0070678_100322392 3300005456 Bacteria 1320
28 Ga0070662_100467990 3300005457 Bacteria 1048
29 Ga0068867_100035821 3300005459 Bacteria 3600
30 Ga0070706_100167639 3300005467 Bacteria 2050
31 Ga0070706_100334422 3300005467 Bacteria 1412
32 Ga0070707_100055588 3300005468 Bacteria 3795
33 Ga0070698_100004259 3300005471 Bacteria 15727
34 Ga0070698_100022749 3300005471 Bacteria 6554
35 Ga0070698_100095600 3300005471 Bacteria 2949
36 Ga0070672_100304596 3300005543 Unclassified 1351
37 Ga0070665_100053173 3300005548 Bacteria 4061
38 Ga0070665_100072989 3300005548 Bacteria 3439
39 Ga0070665_100080892 3300005548 Bacteria 3255
40 Ga0070704_100025610 3300005549 Bacteria 3886
41 Ga0068859_100060949 3300005617 Bacteria 3801
42 Ga0068864_100417293 3300005618 Unclassified 1278
43 Ga0068861_100001257 3300005719 Bacteria 15812
44 Ga0068861_100026950 3300005719 Bacteria 4182
45 Ga0068861_100045954 3300005719 Bacteria 3291
46 Ga0068861_100050813 3300005719 Bacteria 3145
47 Ga0068861_100145976 3300005719 Bacteria 1936
48 Ga0068861_100416626 3300005719 Unclassified 1196
49 Ga0068863_100409260 3300005841 Unclassified 1327
50 Ga0068858_100086991 3300005842 Bacteria 2906
51 Ga0068858_100152780 3300005842 Bacteria 2171
52 Ga0068860_100446809 3300005843 Bacteria 1285
53 Ga0068862_100084237 3300005844 Bacteria 2762
54 Ga0068862_100090500 3300005844 Bacteria 2664
55 Ga0068862_100140554 3300005844 Bacteria 2142
56 Ga0068862_100299966 3300005844 Bacteria 1478
57 Ga0081455_10000758 3300005937 Bacteria 41975
58 Ga0081455_10075096 3300005937 Bacteria 2789
59 Ga0097621_100381402 3300006237 Unclassified 1259
60 Ga0068871_100068321 3300006358 Unclassified 2918
61 Ga0068871_100079214 3300006358 Bacteria 2718
62 Ga0068871_100128306 3300006358 Bacteria 2148
63 Ga0075428_100001168 3300006844 Bacteria 28087
64 Ga0075428_100017883 3300006844 Bacteria 7833
65 Ga0075428_100401390 3300006844 Unclassified 1469
66 Ga0075430_100011806 3300006846 Bacteria 7434
67 Ga0075430_100016375 3300006846 Bacteria 6313
68 Ga0075431_100000293 3300006847 Bacteria 39240
69 Ga0075431_100004502 3300006847 Bacteria 13678
70 Ga0075433_10009919 3300006852 Bacteria 7635
71 Ga0075434_100002234 3300006871 Bacteria 16913
72 Ga0075434_100373287 3300006871 Bacteria 1447
73 Ga0075429_100000763 3300006880 Bacteria 25366
74 Ga0068865_100164415 3300006881 Unclassified 1696
75 Ga0068865_100213536 3300006881 Bacteria 1505
76 Ga0097620_100060947 3300006931 Bacteria 3801
77 Ga0105240_10113629 3300009093 Unclassified 3272
78 Ga0111539_10000636 3300009094 Bacteria 45290
79 Ga0105245_10054672 3300009098 Bacteria 3586
80 Ga0114129_10001200 3300009147 Bacteria 34420
81 Ga0114129_10007528 3300009147 Bacteria 15511
82 Ga0114129_10046606 3300009147 Bacteria 6091
83 Ga0114129_10064654 3300009147 Bacteria 5106
84 Ga0105241_10293045 3300009174 Bacteria 1394
85 Ga0105248_10114946 3300009177 Bacteria 3035
86 Ga0105248_10133020 3300009177 Unclassified 2806
87 Ga0105248_10429270 3300009177 Bacteria 1488
88 Ga0105239_10599669 3300010375 Unclassified 1256
89 Ga0171462_1036 3300013250 Bacteria 79177
90 Ga0163162_10022363 3300013306 Bacteria 6232
91 Ga0157375_10038458 3300013308 Bacteria 4594
92 Ga0157375_10091744 3300013308 Bacteria 3100
93 Ga0163163_10170331 3300014325 Bacteria 2224
94 Ga0157380_10066394 3300014326 Bacteria 2901
95 Ga0157376_10032233 3300014969 Bacteria 4205
96 Ga0157376_10057770 3300014969 Bacteria 3247
97 Ga0157376_10058937 3300014969 Bacteria 3218
98 Ga0157376_10158259 3300014969 Bacteria 2051
99 Ga0157376_10160417 3300014969 Unclassified 2038
100 Ga0157376_10509429 3300014969 Bacteria 1184
101 Ga0207697_10013573 3300025315 Bacteria 3398
102 Ga0207642_10031229 3300025899 Bacteria 2229
103 Ga0207645_10064846 3300025907 Bacteria 2334
104 Ga0207643_10009454 3300025908 Bacteria 5237
105 Ga0207684_10169441 3300025910 Bacteria 1882
106 Ga0207654_10262610 3300025911 Bacteria 1161
107 Ga0207695_10089690 3300025913 Bacteria 3091
108 Ga0207693_10169165 3300025915 Bacteria 1721
109 Ga0207681_10021796 3300025923 Bacteria 4078
110 Ga0207681_10191671 3300025923 Unclassified 1564
111 Ga0207650_10021426 3300025925 Bacteria 4567
112 Ga0207650_10045005 3300025925 Bacteria 3246
113 Ga0207650_10279099 3300025925 Bacteria 1360
114 Ga0207650_10314948 3300025925 Bacteria 1280
115 Ga0207659_10490693 3300025926 Unclassified 1039
116 Ga0207700_10068804 3300025928 Unclassified 2715
117 Ga0207644_10249104 3300025931 Unclassified 1417
118 Ga0207706_10003577 3300025933 Bacteria 14836
119 Ga0207706_10137114 3300025933 Bacteria 2153
120 Ga0207670_10309227 3300025936 Unclassified 1240
121 Ga0207669_10033490 3300025937 Bacteria 2901
122 Ga0207704_10011233 3300025938 Bacteria 4403
123 Ga0207704_10089768 3300025938 Bacteria 2014
124 Ga0207691_10002676 3300025940 Bacteria 17413
125 Ga0207691_10003098 3300025940 Bacteria 16231
126 Ga0207711_10239266 3300025941 Unclassified 1664
127 Ga0207689_10003801 3300025942 Bacteria 13764
128 Ga0207689_10032808 3300025942 Bacteria 4316
129 Ga0207668_10015162 3300025972 Bacteria 4784
130 Ga0207668_10094729 3300025972 Bacteria 2202
131 Ga0207658_10225508 3300025986 Bacteria 1579
132 Ga0207658_10334305 3300025986 Bacteria 1315
133 Ga0207658_10360286 3300025986 Unclassified 1269
134 Ga0207677_10105328 3300026023 Unclassified 2087
135 Ga0207677_10111672 3300026023 Bacteria 2037
136 Ga0207641_10067756 3300026088 Bacteria 3059
137 Ga0207641_10261120 3300026088 Bacteria 1622
138 Ga0207648_10018328 3300026089 Bacteria 6341
139 Ga0207648_10060629 3300026089 Bacteria 3299
140 Ga0207676_10465184 3300026095 Bacteria 1195
141 Ga0207675_100011493 3300026118 Bacteria 8283
142 Ga0207675_100013242 3300026118 Bacteria 7700
143 Ga0207675_100017148 3300026118 Bacteria 6762
144 Ga0207675_100023539 3300026118 Bacteria 5730
145 Ga0207675_100070904 3300026118 Bacteria 3257
146 Ga0207675_100563499 3300026118 Bacteria 1139
147 Ga0207428_10019360 3300027907 Bacteria 5804
148 Ga0268266_10089324 3300028379 Bacteria 2698
149 Ga0268266_10107273 3300028379 Bacteria 2470
150 Ga0268265_10043586 3300028380 Bacteria 3337
151 Ga0268265_10249513 3300028380 Bacteria 1571
152 Ga0268265_10308308 3300028380 Unclassified 1428
153 Ga0268264_10064667 3300028381 Bacteria 3079
154 Ga0268264_10129283 3300028381 Bacteria 2237
155 Ga0268264_10328843 3300028381 Bacteria 1448
156 Ga0265338_10026154 3300028800 Bacteria 5896
157 Ga0265332_10024904 3300031238 Unclassified 2631
158 Ga0265328_10014757 3300031239 Bacteria 3071
159 Ga0265325_10000887 3300031241 Bacteria 21594
160 Ga0265340_10002636 3300031247 Bacteria 10201
161 Ga0265313_10005206 3300031595 Bacteria 9642
162 Ga0265314_10005828 3300031711 Bacteria 11032
163 Ga0265342_10042383 3300031712 Bacteria 2750
164 Ga0316576_10094647 3300031727 Bacteria 2228
165 Ga0316578_10126502 3300031728 Unclassified 1537
166 Ga0307516_10001965 3300031730 Bacteria 28151
167 Ga0373955_0131332 3300035172 Unclassified 1462
168 Ga0373955_0191556 3300035172 Bacteria 1216
169 Ga0316574_0003612 3300035398 Bacteria 8006
170 Ga0373937_0024580 3300036401 Bacteria 5435
171 Ga0373937_0044350 3300036401 Bacteria 4061
172 Ga0373937_0046909 3300036401 Bacteria 3952
173 Ga0373937_0134448 3300036401 Bacteria 2311
174 Ga0373937_0194471 3300036401 Bacteria 1906
175 Ga0373937_0205553 3300036401 Bacteria 1852
176 Ga0373937_0212025 3300036401 Bacteria 1823
177 Ga0316584_0095255 3300036712 Bacteria 2228
178 Ga0436361_1134507 3300039447 Bacteria 2275
179 Ga0451576_0001610 3300045051 Bacteria 37897
180 Ga0451576_0039876 3300045051 Bacteria 4971
181 Ga0495603_0166696 3300046455 Unclassified 1277
182 Ga0495629_0057658 3300046459 Unclassified 2715
183 Ga0495630_0034981 3300046517 Bacteria 3753
184 Ga0495630_0238475 3300046517 Bacteria 1390
185 Ga0495630_0285218 3300046517 Unclassified 1262
186 Ga0495652_0138452 3300046529 Bacteria 1917
187 Ga0495665_0119165 3300046531 Bacteria 1382
188 Ga0495621_0005641 3300046539 Bacteria 3611
189 Ga0495667_0046825 3300046559 Bacteria 2858
190 Ga0495667_0055077 3300046559 Unclassified 2616
191 Ga0495656_0093381 3300046615 Bacteria 1380
192 Ga0495635_0059126 3300046663 Unclassified 2636
193 Ga0495635_0094685 3300046663 Bacteria 2042
194 Ga0495657_0182909 3300046675 Bacteria 1285
195 Ga0495613_0027813 3300046689 Bacteria 4208
196 Ga0495604_0190079 3300047317 Bacteria 1431
197 Ga0495636_0043390 3300047318 Bacteria 1871
198 Ga0495674_0050253 3300047319 Bacteria 3680
199 Ga0495680_0203353 3300047322 Unclassified 1420
200 Ga0495684_0041078 3300047471 Bacteria 3545
201 Ga0495602_0081041 3300048088 Bacteria 2731
202 Ga0501068_0228574 3300049584 Unclassified 1183
203 Ga0501072_0030184 3300049588 Bacteria 4238
204 Ga0501072_0103225 3300049588 Bacteria 2266
205 Ga0501075_0000710 3300049591 Bacteria 20621
206 Ga0501076_0015065 3300049592 Bacteria 5838
207 Ga0501076_0042283 3300049592 Bacteria 3586
208 Ga0501079_0171766 3300049741 Unclassified 1690
209 Ga0501080_0126027 3300049742 Unclassified 2372
210 Ga0501081_0008554 3300049743 Bacteria 6651
211 Ga0501081_0012581 3300049743 Bacteria 5564
212 Ga0501081_0189593 3300049743 Unclassified 1489
213 nmdc:mga05p37_111626_c1 3300050507 Bacteria 3362
214 nmdc:mga05p37_3177_c1 3300050507 Bacteria 19113
215 nmdc:mga05p37_838_c1 3300050507 Bacteria 34484
216 nmdc:mga05p37_87_c1 3300050507 Bacteria 81901
217 nmdc:mga09592_5903_c1 3300050508 Bacteria 9988
218 nmdc:mga0qj67_19274_c1 3300050509 Bacteria 5211
219 nmdc:mga0qj67_34538_c1 3300050509 Bacteria 3950
220 nmdc:mga06r32_163248_c1 3300050510 Bacteria 2210
221 nmdc:mga06r32_1899_c1 3300050510 Bacteria 18613
222 nmdc:mga06r32_60505_c1 3300050510 Bacteria 3645
223 nmdc:mga08y16_219_c1 3300050511 Bacteria 51444
224 nmdc:mga0rr50_266588_c1 3300050513 Unclassified 1426
225 nmdc:mga0a205_4682_c2 3300050515 Bacteria 10772
226 Ga0495619_0021118 3300053085 Bacteria 4155
227 Ga0500616_0057933 3300053153 Bacteria 2017
228 Ga0501084_0009814 3300054114 Bacteria 7915
229 Ga0501082_0043921 3300060353 Bacteria 3855
230 Ga0501082_0192172 3300060353 Bacteria 1775
231 Ga0530510_0005198 3300061734 Bacteria 8983
232 Ga0530510_0064250 3300061734 Bacteria 2658
233 2513857497 2513237137 Bacteria 9558895
234 2585269352 2582581306 Bacteria 6450535
235 Ga0065707_10084573
236 Ga0070676_10244304
237 Ga0070690_100152188
238 Ga0070670_100040162
239 Ga0070670_100298654
240 Ga0070670_100329321
241 Ga0070666_10289114
242 Ga0068868_100252232
243 Ga0070689_100196957
244 Ga0070692_10048574
245 Ga0070668_100024577
246 Ga0070668_100057549
247 Ga0070669_100012879
248 Ga0070669_100029938
249 Ga0070669_100202104
250 Ga0070675_100000733
251 Ga0070675_100041156
252 Ga0070675_100447169
253 Ga0070674_100025911
254 Ga0070688_100281967
255 Ga0070667_100212493
256 Ga0070667_100292836
257 Ga0070694_100001965
258 Ga0070694_100556041
259 Ga0070708_100000604
260 Ga0070678_100089798
261 Ga0070678_100322392
262 Ga0070662_100467990
263 Ga0068867_100035821
264 Ga0070706_100167639
265 Ga0070706_100334422
266 Ga0070707_100055588
267 Ga0070698_100004259
268 Ga0070698_100022749
269 Ga0070698_100095600
270 Ga0070672_100304596
271 Ga0070665_100053173
272 Ga0070665_100072989
273 Ga0070665_100080892
274 Ga0070704_100025610
275 Ga0068859_100060949
276 Ga0068864_100417293
277 Ga0068861_100001257
278 Ga0068861_100026950
279 Ga0068861_100045954
280 Ga0068861_100050813
281 Ga0068861_100145976
282 Ga0068861_100416626
283 Ga0068863_100409260
284 Ga0068858_100086991
285 Ga0068858_100152780
286 Ga0068860_100446809
287 Ga0068862_100084237
288 Ga0068862_100090500
289 Ga0068862_100140554
290 Ga0068862_100299966
291 Ga0081455_10000758
292 Ga0081455_10075096
293 Ga0097621_100381402
294 Ga0068871_100068321
295 Ga0068871_100079214
296 Ga0068871_100128306
297 Ga0075428_100001168
298 Ga0075428_100017883
299 Ga0075428_100401390
300 Ga0075430_100011806
301 Ga0075430_100016375
302 Ga0075431_100000293
303 Ga0075431_100004502
304 Ga0075433_10009919
305 Ga0075434_100002234
306 Ga0075434_100373287
307 Ga0075429_100000763
308 Ga0068865_100164415
309 Ga0068865_100213536
310 Ga0097620_100060947
311 Ga0105240_10113629
312 Ga0111539_10000636
313 Ga0105245_10054672
314 Ga0114129_10001200
315 Ga0114129_10007528
316 Ga0114129_10046606
317 Ga0114129_10064654
318 Ga0105241_10293045
319 Ga0105248_10114946
320 Ga0105248_10133020
321 Ga0105248_10429270
322 Ga0105239_10599669
323 Ga0171462_1036
324 Ga0163162_10022363
325 Ga0157375_10038458
326 Ga0157375_10091744
327 Ga0163163_10170331
328 Ga0157380_10066394
329 Ga0157376_10032233
330 Ga0157376_10057770
331 Ga0157376_10058937
332 Ga0157376_10158259
333 Ga0157376_10160417
334 Ga0157376_10509429
335 Ga0207697_10013573
336 Ga0207642_10031229
337 Ga0207645_10064846
338 Ga0207643_10009454
339 Ga0207684_10169441
340 Ga0207654_10262610
341 Ga0207695_10089690
342 Ga0207693_10169165
343 Ga0207681_10021796
344 Ga0207681_10191671
345 Ga0207650_10021426
346 Ga0207650_10045005
347 Ga0207650_10279099
348 Ga0207650_10314948
349 Ga0207659_10490693
350 Ga0207700_10068804
351 Ga0207644_10249104
352 Ga0207706_10003577
353 Ga0207706_10137114
354 Ga0207670_10309227
355 Ga0207669_10033490
356 Ga0207704_10011233
357 Ga0207704_10089768
358 Ga0207691_10002676
359 Ga0207691_10003098
360 Ga0207711_10239266
361 Ga0207689_10003801
362 Ga0207689_10032808
363 Ga0207668_10015162
364 Ga0207668_10094729
365 Ga0207658_10225508
366 Ga0207658_10334305
367 Ga0207658_10360286
368 Ga0207677_10105328
369 Ga0207677_10111672
370 Ga0207641_10067756
371 Ga0207641_10261120
372 Ga0207648_10018328
373 Ga0207648_10060629
374 Ga0207676_10465184
375 Ga0207675_100011493
376 Ga0207675_100013242
377 Ga0207675_100017148
378 Ga0207675_100023539
379 Ga0207675_100070904
380 Ga0207675_100563499
381 Ga0207428_10019360
382 Ga0268266_10089324
383 Ga0268266_10107273
384 Ga0268265_10043586
385 Ga0268265_10249513
386 Ga0268265_10308308
387 Ga0268264_10064667
388 Ga0268264_10129283
389 Ga0268264_10328843
390 Ga0265338_10026154
391 Ga0265332_10024904
392 Ga0265328_10014757
393 Ga0265325_10000887
394 Ga0265340_10002636
395 Ga0265313_10005206
396 Ga0265314_10005828
397 Ga0265342_10042383
398 Ga0316576_10094647
399 Ga0316578_10126502
400 Ga0307516_10001965
401 Ga0373955_0131332
402 Ga0373955_0191556
403 Ga0316574_0003612
404 Ga0373937_0024580
405 Ga0373937_0044350
406 Ga0373937_0046909
407 Ga0373937_0134448
408 Ga0373937_0194471
409 Ga0373937_0205553
410 Ga0373937_0212025
411 Ga0316584_0095255
412 Ga0436361_1134507
413 Ga0451576_0001610
414 Ga0451576_0039876
415 Ga0495603_0166696
416 Ga0495629_0057658
417 Ga0495630_0034981
418 Ga0495630_0238475
419 Ga0495630_0285218
420 Ga0495652_0138452
421 Ga0495665_0119165
422 Ga0495621_0005641
423 Ga0495667_0046825
424 Ga0495667_0055077
425 Ga0495656_0093381
426 Ga0495635_0059126
427 Ga0495635_0094685
428 Ga0495657_0182909
429 Ga0495613_0027813
430 Ga0495604_0190079
431 Ga0495636_0043390
432 Ga0495674_0050253
433 Ga0495680_0203353
434 Ga0495684_0041078
435 Ga0495602_0081041
436 Ga0501068_0228574
437 Ga0501072_0030184
438 Ga0501072_0103225
439 Ga0501075_0000710
440 Ga0501076_0015065
441 Ga0501076_0042283
442 Ga0501079_0171766
443 Ga0501080_0126027
444 Ga0501081_0008554
445 Ga0501081_0012581
446 Ga0501081_0189593
447 nmdc:mga05p37_111626_c1
448 nmdc:mga05p37_3177_c1
449 nmdc:mga05p37_838_c1
450 nmdc:mga05p37_87_c1
451 nmdc:mga09592_5903_c1
452 nmdc:mga0qj67_19274_c1
453 nmdc:mga0qj67_34538_c1
454 nmdc:mga06r32_163248_c1
455 nmdc:mga06r32_1899_c1
456 nmdc:mga06r32_60505_c1
457 nmdc:mga08y16_219_c1
458 nmdc:mga0rr50_266588_c1
459 nmdc:mga0a205_4682_c2
460 Ga0495619_0021118
461 Ga0500616_0057933
462 Ga0501084_0009814
463 Ga0501082_0043921
464 Ga0501082_0192172
465 Ga0530510_0005198
466 Ga0530510_0064250
467 2513857497
468 2585269352

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13145

Rotamase_2

PPIC-type PPIASE domain

168

299

0.75

PF00639

Rotamase

PPIC-type PPIASE domain

195

285

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
2pv2-assembly1.cif.gz_B crystallographic structure of sura first peptidyl-prolyl isomerase domain complexed with peptide nftlkfwdifrk 0.6994 189 285
1nmv-assembly1.cif.gz_A solution structure of human pin1 0.6974 186 285
6xd8-assembly2.cif.gz_B crystal structure of peptidylprolyl isomerase (prsa) fragment from bacillus anthracis 0.6855 186 287
2m08-assembly1.cif.gz_A the solution structure of nmpin, the parvuline of nitrosopumilus maritimus 0.6832 186 285
6xd8-assembly2.cif.gz_B crystal structure of peptidylprolyl isomerase (prsa) fragment from bacillus anthracis 0.6796 186 287
ID Description Score Start End Superfamily
af_A0A1D6IJH2_25_297_3.60.20.10 Alpha Beta;4-Layer Sandwich;Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1;Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.8277 96 127 3.60.20.10
3rfwA03 Alpha Beta;Roll;Chitinase A; domain 3; 0.7533 184 289 3.10.50.40
af_C6T9G3_83_177_3.10.50.40 Alpha Beta;Roll;Chitinase A; domain 3; 0.7339 186 287 3.10.50.40
3rfwA03 Alpha Beta;Roll;Chitinase A; domain 3; 0.7281 184 289 3.10.50.40
af_Q54Z53_33_124_3.10.50.40 Alpha Beta;Roll;Chitinase A; domain 3; 0.7252 188 285 3.10.50.40
ID Description Score Start End GO Terms
AF-A0A523EKW1-F1-model_v4 Peptidyl-prolyl cis-trans isomerase 0.8964 159 335 GO:0003755
AF-A0A523EKW1-F1-model_v4 Peptidyl-prolyl cis-trans isomerase 0.8866 159 335 GO:0003755
AF-A0A3B9L3R0-F1-model_v4 PpiC domain-containing protein 0.879 167 331 GO:0003755
AF-A0A2D7DLF7-F1-model_v4 deleted 0.8734 91 332
AF-A0A3C1TX43-F1-model_v4 deleted 0.8563 175 331

Map