F346617
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 233 | 168 | 466 | 386 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2932431166|2932433936 |
| Length | 425 |
| Sequence | RATGGPSAPGSTLLTGIGELTTNVPGGPGTRDGDQTGLVTDAVVLLDGGRVAWAGPAREARDAVGHALDGREPDVTVDAGGRAVLPGFVDSHTHLVFAGDRAAEFEARMAGRPYEAGGIRSTVAATRAASDDVLRSGLARHLDEAARQGTTTVEVKSGYGLTVADEERSVRLAREATPEVTFLGAHVVPVEYAGRADAYLDLVCGEMLAACAPHARWVDVFCETGAFTPEQSRRVLEAGAAAGLGVRVHANQLGPGEGVRLAVGLGAAAVDHCTHLTDDDVAALAGSWTGGGARSSGAPGTVATLLPGVEFSTRQPYPDARRLLDAGAVVALASDCNPGSSYTSSMPLCVALAVREMRMTVAEAVWSATAGGALALRRDDVGHLAPGARADVVLLDAPSRTHLAYRPGVPLVSAVWKDAVRLPPR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300001990 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 | Metagenome | Rhizosphere |
| 2 | 3300002772 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS | Metagenome | Endosphere |
| 3 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 4 | 3300003214 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL | Metagenome | Endosphere |
| 5 | 3300003760 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 | Metagenome | Endosphere |
| 6 | 3300003762 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 | Metagenome | Endosphere |
| 7 | 3300003763 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 | Metagenome | Endosphere |
| 8 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 14 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 15 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 17 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 19 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 20 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 21 | 3300006042 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 | Metagenome | Endosphere |
| 22 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 23 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 24 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 25 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 26 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 27 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 28 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 29 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 30 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 31 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 32 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 33 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 38 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 39 | 3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 40 | 3300025228 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 41 | 3300025229 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 42 | 3300025231 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 43 | 3300025233 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 44 | 3300025242 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 45 | 3300025254 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 46 | 3300025261 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) | Metagenome | Endosphere |
| 47 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 48 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 62 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 63 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 64 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 65 | 3300031649 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM | Metagenome | Unclassified |
| 66 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 67 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 68 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 69 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 70 | 3300035091 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 | Metagenome | Rhizosphere |
| 71 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 72 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 73 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 74 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 75 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 76 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 77 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 78 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 79 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 80 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 81 | 3300046453 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 84 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 85 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 86 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 87 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 88 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 89 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 90 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 91 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 92 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 93 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 94 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 95 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 96 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 97 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 98 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 99 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 100 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 101 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 102 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 103 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 104 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 105 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 106 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 107 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 108 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 109 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 110 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 111 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 112 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 113 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 114 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 115 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 116 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 117 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 118 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 119 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 120 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 121 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 122 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 123 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 124 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 125 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 126 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 127 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 128 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 129 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 130 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 131 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 132 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 133 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 134 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 135 | 3300053080 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere | Metagenome | Endosphere |
| 136 | 3300053090 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere | Metagenome | Endosphere |
| 137 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 138 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 139 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 140 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 141 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 142 | 2932431166 | Cellulosimicrobium sp. 4261 | Isolate | Rhizosphere |
| 143 | 2501939600 | Micromonospora sp. L5 | Isolate | Unclassified |
| 144 | 2643221572 | Leifsonia sp. Root60 | Isolate | Unclassified |
| 145 | 2643221617 | Nocardioides sp. Root79 | Isolate | Unclassified |
| 146 | 2643221620 | Nocardioides sp. Root240 | Isolate | Unclassified |
| 147 | 2643221631 | Kitasatospora sp. Root107 | Isolate | Unclassified |
| 148 | 2643221635 | Yonghaparkia sp. Root332 | Isolate | Unclassified |
| 149 | 2643221669 | Leifsonia sp. Root1293 | Isolate | Unclassified |
| 150 | 2675903058 | Actinopolymorpha cephalotaxi CPCC 202808 | Isolate | Rhizosphere |
| 151 | 2675903059 | Asanoa hainanensis CGMCC 4.5593 | Isolate | Rhizosphere |
| 152 | 2808606372 | Agromyces sp. 23-23 | Isolate | Unclassified |
| 153 | 2827628540 | Actinopolymorpha cephalotaxi DSM 45117 | Isolate | Rhizosphere |
| 154 | 2855683550 | Micromonospora sp. RP3T | Isolate | Unclassified |
| 155 | 2856858025 | Micromonospora aurantiaca 110B(2018) | Isolate | Unclassified |
| 156 | 2857481737 | Nocardioides sp. R-74106 | Isolate | Unclassified |
| 157 | 2884763398 | Leifsonia sp. PS1209 | Isolate | Stem Tuber |
| 158 | 2895660088 | Leifsonia flava SYP-B2174 | Isolate | Rhizosphere |
| 159 | 2904509784 | Microbacterium sp. 1676 | Isolate | Rhizosphere |
| 160 | 2919443155 | Agromyces sp. 3263 | Isolate | Rhizosphere |
| 161 | 2977228692 | Microbacterium sp. SORGH_AS 421 | Isolate | Unclassified |
| 162 | 2977236895 | Microbacterium testaceum SORGH_AS 426 | Isolate | Unclassified |
| 163 | 2984542743 | Microbacterium sp. SORGH_AS454 | Isolate | Aerial Root |
| 164 | 2997600082 | Streptomyces coffeae CA1R205 | Isolate | Unclassified |
| 165 | 649633069 | Micromonospora sp. L5 | Isolate | Unclassified |
| 166 | 8003856774 | Micromonospora echinofusca MPMI6 | Isolate | Unclassified |
| 167 | 8004182704 | Microbacterium paraoxydans ku-mp | Isolate | Unclassified |
| 168 | 8004212874 | Microbacterium sp. NC79 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 87.55 |
| Metatranscriptomes | 0.86 |
| Isolates | 11.59 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0.43 |
| Bulb | 0 |
| Endosphere | 15.88 |
| Nodule | 0 |
| Rhizoplane | 6.44 |
| Rhizosphere | 64.38 |
| Stem | 0 |
| Stem Tuber | 0.43 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24737J22298_10017992 | 3300001990 | Bacteria | 2271 |
| 2 | JGI25164J39214_1000691 | 3300002772 | Bacteria | 13171 |
| 3 | JGI25406J46586_10000951 | 3300003203 | Bacteria | 13614 |
| 4 | JGI25165J46597_1000107 | 3300003214 | Bacteria | 150846 |
| 5 | Ga0055527_1000025 | 3300003760 | Bacteria | 195817 |
| 6 | Ga0055542_1000048 | 3300003762 | Bacteria | 195800 |
| 7 | Ga0055529_1000057 | 3300003763 | Bacteria | 195807 |
| 8 | Ga0070658_10002777 | 3300005327 | Bacteria | 14550 |
| 9 | Ga0070658_10006343 | 3300005327 | Bacteria | 9584 |
| 10 | Ga0070658_10168322 | 3300005327 | Bacteria | 1840 |
| 11 | Ga0070660_100001755 | 3300005339 | Bacteria | 14876 |
| 12 | Ga0070674_100231680 | 3300005356 | Bacteria | 1442 |
| 13 | Ga0070659_100004070 | 3300005366 | Bacteria | 10424 |
| 14 | Ga0070659_100172250 | 3300005366 | Bacteria | 1774 |
| 15 | Ga0070667_100221073 | 3300005367 | Bacteria | 1686 |
| 16 | Ga0070713_100011604 | 3300005436 | Bacteria | 6425 |
| 17 | Ga0070713_100102650 | 3300005436 | Bacteria | 2480 |
| 18 | Ga0070713_100155693 | 3300005436 | Bacteria | 2036 |
| 19 | Ga0070707_100049499 | 3300005468 | Bacteria | 4028 |
| 20 | Ga0070699_100058843 | 3300005518 | Bacteria | 3329 |
| 21 | Ga0070679_100042923 | 3300005530 | Bacteria | 4504 |
| 22 | Ga0070664_100008960 | 3300005564 | Bacteria | 8115 |
| 23 | Ga0068864_100004224 | 3300005618 | Bacteria | 11820 |
| 24 | Ga0068863_100057276 | 3300005841 | Bacteria | 3688 |
| 25 | Ga0081539_10000456 | 3300005985 | Bacteria | 86722 |
| 26 | Ga0075368_10001178 | 3300006042 | Bacteria | 8243 |
| 27 | Ga0075363_100000303 | 3300006048 | Bacteria | 14439 |
| 28 | Ga0075363_100091933 | 3300006048 | Bacteria | 1671 |
| 29 | Ga0075364_10010933 | 3300006051 | Bacteria | 5502 |
| 30 | Ga0075364_10112786 | 3300006051 | Bacteria | 1815 |
| 31 | Ga0075367_10004157 | 3300006178 | Bacteria | 7019 |
| 32 | Ga0075367_10020247 | 3300006178 | Bacteria | 3702 |
| 33 | Ga0075367_10050618 | 3300006178 | Bacteria | 2453 |
| 34 | Ga0075370_10047547 | 3300006353 | Bacteria | 2430 |
| 35 | Ga0075428_100001963 | 3300006844 | Bacteria | 22131 |
| 36 | Ga0075428_100005027 | 3300006844 | Bacteria | 14694 |
| 37 | Ga0075430_100003420 | 3300006846 | Bacteria | 13269 |
| 38 | Ga0075430_100016002 | 3300006846 | Bacteria | 6388 |
| 39 | Ga0075430_100024981 | 3300006846 | Bacteria | 5082 |
| 40 | Ga0075431_100001049 | 3300006847 | Bacteria | 24673 |
| 41 | Ga0075431_100230015 | 3300006847 | Bacteria | 1889 |
| 42 | Ga0075433_10103190 | 3300006852 | Bacteria | 2526 |
| 43 | Ga0075429_100005348 | 3300006880 | Bacteria | 11043 |
| 44 | Ga0075429_100008061 | 3300006880 | Bacteria | 9158 |
| 45 | Ga0075436_100049132 | 3300006914 | Bacteria | 2911 |
| 46 | Ga0075435_100005631 | 3300007076 | Bacteria | 8776 |
| 47 | Ga0111539_10051500 | 3300009094 | Bacteria | 4903 |
| 48 | Ga0105245_10000953 | 3300009098 | Bacteria | 26302 |
| 49 | Ga0114129_10003435 | 3300009147 | Bacteria | 22270 |
| 50 | Ga0114129_10003865 | 3300009147 | Bacteria | 21121 |
| 51 | Ga0114129_10008499 | 3300009147 | Bacteria | 14634 |
| 52 | Ga0114129_10052281 | 3300009147 | Bacteria | 5733 |
| 53 | Ga0105248_10053510 | 3300009177 | Bacteria | 4529 |
| 54 | Ga0157369_10056811 | 3300013105 | Bacteria | 4223 |
| 55 | Ga0157369_10177967 | 3300013105 | Bacteria | 2239 |
| 56 | Ga0157379_10169564 | 3300014968 | Bacteria | 1970 |
| 57 | Ga0206353_10894903 | 3300020082 | Bacteria | 1912 |
| 58 | Ga0206353_11649616 | 3300020082 | Bacteria | 3093 |
| 59 | Ga0209672_100011 | 3300025228 | Bacteria | 856297 |
| 60 | Ga0209147_101032 | 3300025229 | Bacteria | 11865 |
| 61 | Ga0207427_100028 | 3300025231 | Bacteria | 388949 |
| 62 | Ga0209437_100854 | 3300025233 | Bacteria | 12979 |
| 63 | Ga0209258_101931 | 3300025242 | Bacteria | 6085 |
| 64 | Ga0209148_1000023 | 3300025254 | Bacteria | 680511 |
| 65 | Ga0209233_1000001 | 3300025261 | Bacteria | 2992747 |
| 66 | Ga0209455_1000023 | 3300025272 | Bacteria | 680449 |
| 67 | Ga0207647_10074722 | 3300025904 | Bacteria | 2041 |
| 68 | Ga0207705_10003751 | 3300025909 | Bacteria | 11577 |
| 69 | Ga0207657_10029372 | 3300025919 | Bacteria | 5005 |
| 70 | Ga0207657_10053106 | 3300025919 | Bacteria | 3513 |
| 71 | Ga0207687_10002705 | 3300025927 | Bacteria | 11995 |
| 72 | Ga0207700_10014177 | 3300025928 | Bacteria | 5215 |
| 73 | Ga0207664_10079494 | 3300025929 | Bacteria | 2662 |
| 74 | Ga0207664_10080668 | 3300025929 | Bacteria | 2645 |
| 75 | Ga0207690_10040767 | 3300025932 | Bacteria | 3038 |
| 76 | Ga0207711_10177682 | 3300025941 | Bacteria | 1934 |
| 77 | Ga0207679_10047101 | 3300025945 | Bacteria | 3130 |
| 78 | Ga0207678_10024514 | 3300026067 | Bacteria | 5270 |
| 79 | Ga0207674_10089547 | 3300026116 | Bacteria | 3070 |
| 80 | Ga0207683_10034705 | 3300026121 | Bacteria | 4385 |
| 81 | Ga0207698_10241510 | 3300026142 | Bacteria | 1646 |
| 82 | Ga0307515_10000294 | 3300028794 | Bacteria | 123065 |
| 83 | Ga0265340_10014328 | 3300031247 | Bacteria | 4146 |
| 84 | Ga0307513_10125566 | 3300031456 | Bacteria | 2522 |
| 85 | Ga0307508_10002002 | 3300031616 | Bacteria | 22227 |
| 86 | Ga0307508_10024381 | 3300031616 | Bacteria | 5489 |
| 87 | Ga0307514_10004846 | 3300031649 | Bacteria | 12240 |
| 88 | Ga0307516_10000514 | 3300031730 | Bacteria | 51755 |
| 89 | Ga0307406_10000886 | 3300031901 | Bacteria | 16853 |
| 90 | Ga0307406_10104093 | 3300031901 | Bacteria | 1940 |
| 91 | Ga0307407_10042472 | 3300031903 | Bacteria | 2550 |
| 92 | Ga0307409_100243862 | 3300031995 | Bacteria | 1638 |
| 93 | Ga0373951_0004293 | 3300035091 | Bacteria | 3393 |
| 94 | Ga0395899_0015238 | 3300037312 | Bacteria | 5861 |
| 95 | Ga0395899_0123474 | 3300037312 | Bacteria | 1853 |
| 96 | Ga0395898_0000100 | 3300037466 | Bacteria | 226446 |
| 97 | Ga0436365_0464662 | 3300039437 | Bacteria | 2275 |
| 98 | Ga0466965_0043571 | 3300044683 | Bacteria | 2216 |
| 99 | Ga0466963_0046967 | 3300044694 | Bacteria | 2849 |
| 100 | Ga0466970_0048115 | 3300044765 | Bacteria | 2273 |
| 101 | Ga0466957_0037633 | 3300044842 | Bacteria | 2914 |
| 102 | Ga0466957_0051290 | 3300044842 | Bacteria | 2511 |
| 103 | Ga0466959_0110252 | 3300045049 | Bacteria | 1965 |
| 104 | Ga0466958_0066969 | 3300045836 | Bacteria | 2193 |
| 105 | Ga0466967_0128849 | 3300045976 | Bacteria | 2347 |
| 106 | Ga0466967_0315331 | 3300045976 | Bacteria | 1507 |
| 107 | Ga0466967_0405966 | 3300045976 | Bacteria | 1326 |
| 108 | Ga0495627_000917 | 3300046453 | Bacteria | 20402 |
| 109 | Ga0495672_0106903 | 3300047320 | Bacteria | 1508 |
| 110 | Ga0496104_0041010 | 3300048907 | Bacteria | 4339 |
| 111 | Ga0496104_0097651 | 3300048907 | Bacteria | 2812 |
| 112 | Ga0496104_0348816 | 3300048907 | Bacteria | 1393 |
| 113 | Ga0496105_0025496 | 3300048908 | Bacteria | 4813 |
| 114 | Ga0496105_0077894 | 3300048908 | Bacteria | 2737 |
| 115 | Ga0496105_0130260 | 3300048908 | Bacteria | 2074 |
| 116 | Ga0496108_0007822 | 3300048911 | Bacteria | 8662 |
| 117 | Ga0496109_0116063 | 3300048912 | Bacteria | 2491 |
| 118 | Ga0496109_0141654 | 3300048912 | Bacteria | 2248 |
| 119 | Ga0496110_0006263 | 3300048913 | Bacteria | 9388 |
| 120 | Ga0496111_0015455 | 3300048914 | Bacteria | 5241 |
| 121 | Ga0496112_0173492 | 3300048915 | Bacteria | 2121 |
| 122 | Ga0496112_0207458 | 3300048915 | Bacteria | 1917 |
| 123 | Ga0496113_0027998 | 3300048916 | Bacteria | 4047 |
| 124 | Ga0496114_0052471 | 3300048917 | Bacteria | 3397 |
| 125 | Ga0496117_0022367 | 3300048920 | Bacteria | 5073 |
| 126 | Ga0496118_0003744 | 3300048921 | Bacteria | 18805 |
| 127 | Ga0496119_0055823 | 3300048922 | Bacteria | 2397 |
| 128 | Ga0496125_0001688 | 3300048928 | Bacteria | 30874 |
| 129 | Ga0496126_0069252 | 3300048929 | Bacteria | 3148 |
| 130 | Ga0501032_0008389 | 3300049569 | Bacteria | 7534 |
| 131 | Ga0501032_0027066 | 3300049569 | Bacteria | 3942 |
| 132 | Ga0501034_0007246 | 3300049571 | Bacteria | 11837 |
| 133 | Ga0501034_0014201 | 3300049571 | Bacteria | 8208 |
| 134 | Ga0501034_0025256 | 3300049571 | Bacteria | 6047 |
| 135 | Ga0501036_0005222 | 3300049572 | Bacteria | 10501 |
| 136 | Ga0501036_0005813 | 3300049572 | Bacteria | 9990 |
| 137 | Ga0501036_0160950 | 3300049572 | Bacteria | 1892 |
| 138 | Ga0501037_0003428 | 3300049573 | Bacteria | 11521 |
| 139 | Ga0501037_0024259 | 3300049573 | Bacteria | 4485 |
| 140 | Ga0501038_0005745 | 3300049574 | Bacteria | 11492 |
| 141 | Ga0501038_0151190 | 3300049574 | Bacteria | 1892 |
| 142 | Ga0501039_0034608 | 3300049575 | Bacteria | 3898 |
| 143 | Ga0501039_0040874 | 3300049575 | Bacteria | 3579 |
| 144 | Ga0501039_0203772 | 3300049575 | Bacteria | 1555 |
| 145 | Ga0501041_0066488 | 3300049577 | Bacteria | 2209 |
| 146 | Ga0501042_0005205 | 3300049578 | Bacteria | 8359 |
| 147 | Ga0501043_0006073 | 3300049579 | Bacteria | 9702 |
| 148 | Ga0501043_0140351 | 3300049579 | Bacteria | 1892 |
| 149 | Ga0501046_0000505 | 3300049580 | Bacteria | 39031 |
| 150 | Ga0501046_0014277 | 3300049580 | Bacteria | 6707 |
| 151 | Ga0501046_0023867 | 3300049580 | Bacteria | 5023 |
| 152 | Ga0501047_0087512 | 3300049581 | Bacteria | 2992 |
| 153 | Ga0501048_0004271 | 3300049582 | Bacteria | 10886 |
| 154 | Ga0501068_0008839 | 3300049584 | Bacteria | 5620 |
| 155 | Ga0501068_0039664 | 3300049584 | Bacteria | 2824 |
| 156 | Ga0501070_0018873 | 3300049586 | Bacteria | 5785 |
| 157 | Ga0501070_0040349 | 3300049586 | Bacteria | 3892 |
| 158 | Ga0501070_0164251 | 3300049586 | Bacteria | 1830 |
| 159 | Ga0501072_0007304 | 3300049588 | Bacteria | 8377 |
| 160 | Ga0501073_0027372 | 3300049589 | Bacteria | 4077 |
| 161 | Ga0501073_0075326 | 3300049589 | Bacteria | 2349 |
| 162 | Ga0501073_0087462 | 3300049589 | Bacteria | 2167 |
| 163 | Ga0501074_0091261 | 3300049590 | Bacteria | 2181 |
| 164 | Ga0501075_0041968 | 3300049591 | Bacteria | 3430 |
| 165 | Ga0501077_0076352 | 3300049593 | Bacteria | 2122 |
| 166 | Ga0501079_0018053 | 3300049741 | Bacteria | 5388 |
| 167 | Ga0501079_0160319 | 3300049741 | Bacteria | 1754 |
| 168 | Ga0501080_0055371 | 3300049742 | Bacteria | 3694 |
| 169 | Ga0501081_0006606 | 3300049743 | Bacteria | 7535 |
| 170 | Ga0501035_0031676 | 3300049822 | Bacteria | 4815 |
| 171 | Ga0501044_0064550 | 3300049823 | Bacteria | 3737 |
| 172 | Ga0501044_0131390 | 3300049823 | Bacteria | 2498 |
| 173 | Ga0501044_0222771 | 3300049823 | Bacteria | 1836 |
| 174 | Ga0501045_0036306 | 3300049824 | Bacteria | 3578 |
| 175 | Ga0501045_0100216 | 3300049824 | Bacteria | 2144 |
| 176 | nmdc:mga03n38_18696_c1 | 3300050490 | Bacteria | 2740 |
| 177 | nmdc:mga00v17_130699_c1 | 3300050491 | Bacteria | 1604 |
| 178 | nmdc:mga00v17_178524_c1 | 3300050491 | Bacteria | 1370 |
| 179 | nmdc:mga00v17_32014_c1 | 3300050491 | Bacteria | 3106 |
| 180 | nmdc:mga00v17_48998_c1 | 3300050491 | Bacteria | 2561 |
| 181 | nmdc:mga00v17_58538_c1 | 3300050491 | Bacteria | 2361 |
| 182 | nmdc:mga0yw44_7383_c1 | 3300050492 | Bacteria | 5404 |
| 183 | nmdc:mga06z11_14504_c1 | 3300050494 | Bacteria | 3492 |
| 184 | nmdc:mga07m45_43780_c1 | 3300050496 | Bacteria | 2510 |
| 185 | nmdc:mga05p37_37336_c1 | 3300050507 | Bacteria | 5956 |
| 186 | nmdc:mga05p37_56156_c1 | 3300050507 | Bacteria | 4847 |
| 187 | nmdc:mga05p37_9085_c1 | 3300050507 | Bacteria | 11746 |
| 188 | nmdc:mga09592_290_c1 | 3300050508 | Bacteria | 36462 |
| 189 | nmdc:mga0qj67_4691_c1 | 3300050509 | Bacteria | 9923 |
| 190 | nmdc:mga0qj67_74_c1 | 3300050509 | Bacteria | 40568 |
| 191 | nmdc:mga0qj67_8685_c1 | 3300050509 | Bacteria | 7544 |
| 192 | nmdc:mga06r32_16704_c1 | 3300050510 | Bacteria | 6690 |
| 193 | nmdc:mga06r32_18095_c1 | 3300050510 | Bacteria | 6444 |
| 194 | nmdc:mga06r32_377_c1 | 3300050510 | Bacteria | 37475 |
| 195 | nmdc:mga0n895_17529_c1 | 3300050512 | Bacteria | 6603 |
| 196 | nmdc:mga0rr50_40112_c1 | 3300050513 | Bacteria | 3402 |
| 197 | nmdc:mga08x19_34444_c1 | 3300050514 | Bacteria | 3201 |
| 198 | nmdc:mga0a205_27077_c1 | 3300050515 | Bacteria | 5472 |
| 199 | Ga0500635_0000276 | 3300053080 | Bacteria | 19270 |
| 200 | Ga0500646_0015952 | 3300053090 | Bacteria | 1958 |
| 201 | Ga0500559_0000182 | 3300053136 | Bacteria | 49814 |
| 202 | Ga0500568_0005223 | 3300053139 | Bacteria | 6761 |
| 203 | Ga0500568_0012901 | 3300053139 | Bacteria | 3826 |
| 204 | Ga0500616_0000117 | 3300053153 | Bacteria | 145655 |
| 205 | Ga0501084_0069471 | 3300054114 | Bacteria | 2949 |
| 206 | Ga0530510_0004060 | 3300061734 | Bacteria | 10104 |
| 207 | 2932433936 | 2932431166 | Bacteria | 4215299 |
| 208 | 2501942548 | 2501939600 | Bacteria | 6907073 |
| 209 | 2643876848 | 2643221572 | Bacteria | 3614809 |
| 210 | 2644102238 | 2643221617 | Bacteria | 5139111 |
| 211 | 2644115462 | 2643221620 | Bacteria | 5134593 |
| 212 | 2644175705 | 2643221631 | Bacteria | 8168043 |
| 213 | 2644197843 | 2643221635 | Bacteria | 2632343 |
| 214 | 2644383903 | 2643221669 | Bacteria | 3611286 |
| 215 | 2676477917 | 2675903058 | Bacteria | 6822861 |
| 216 | 2676480606 | 2675903059 | Bacteria | 8644972 |
| 217 | 2808900524 | 2808606372 | Bacteria | 4649509 |
| 218 | 2827629241 | 2827628540 | Bacteria | 6858585 |
| 219 | 2855689195 | 2855683550 | Bacteria | 7134265 |
| 220 | 2856860838 | 2856858025 | Bacteria | 7255264 |
| 221 | 2857484476 | 2857481737 | Bacteria | 4761446 |
| 222 | 2884766841 | 2884763398 | Bacteria | 4091164 |
| 223 | 2895663089 | 2895660088 | Bacteria | 3782833 |
| 224 | 2904511420 | 2904509784 | Bacteria | 3520416 |
| 225 | 2919445113 | 2919443155 | Bacteria | 4072969 |
| 226 | 2977231986 | 2977228692 | Bacteria | 3450105 |
| 227 | 2977237345 | 2977236895 | Bacteria | 3569373 |
| 228 | 2984544869 | 2984542743 | Bacteria | 3569378 |
| 229 | 2997604100 | 2997600082 | Bacteria | 9896405 |
| 230 | 649811588 | 649633069 | Bacteria | 6962533 |
| 231 | 8003858593 | 8003856774 | Bacteria | 7675274 |
| 232 | 8004185849 | 8004182704 | Bacteria | 3391155 |
| 233 | 8004214710 | 8004212874 | Bacteria | 2861420 |
| 234 | JGI24737J22298_10017992 | |||
| 235 | JGI25164J39214_1000691 | |||
| 236 | JGI25406J46586_10000951 | |||
| 237 | JGI25165J46597_1000107 | |||
| 238 | Ga0055527_1000025 | |||
| 239 | Ga0055542_1000048 | |||
| 240 | Ga0055529_1000057 | |||
| 241 | Ga0070658_10002777 | |||
| 242 | Ga0070658_10006343 | |||
| 243 | Ga0070658_10168322 | |||
| 244 | Ga0070660_100001755 | |||
| 245 | Ga0070674_100231680 | |||
| 246 | Ga0070659_100004070 | |||
| 247 | Ga0070659_100172250 | |||
| 248 | Ga0070667_100221073 | |||
| 249 | Ga0070713_100011604 | |||
| 250 | Ga0070713_100102650 | |||
| 251 | Ga0070713_100155693 | |||
| 252 | Ga0070707_100049499 | |||
| 253 | Ga0070699_100058843 | |||
| 254 | Ga0070679_100042923 | |||
| 255 | Ga0070664_100008960 | |||
| 256 | Ga0068864_100004224 | |||
| 257 | Ga0068863_100057276 | |||
| 258 | Ga0081539_10000456 | |||
| 259 | Ga0075368_10001178 | |||
| 260 | Ga0075363_100000303 | |||
| 261 | Ga0075363_100091933 | |||
| 262 | Ga0075364_10010933 | |||
| 263 | Ga0075364_10112786 | |||
| 264 | Ga0075367_10004157 | |||
| 265 | Ga0075367_10020247 | |||
| 266 | Ga0075367_10050618 | |||
| 267 | Ga0075370_10047547 | |||
| 268 | Ga0075428_100001963 | |||
| 269 | Ga0075428_100005027 | |||
| 270 | Ga0075430_100003420 | |||
| 271 | Ga0075430_100016002 | |||
| 272 | Ga0075430_100024981 | |||
| 273 | Ga0075431_100001049 | |||
| 274 | Ga0075431_100230015 | |||
| 275 | Ga0075433_10103190 | |||
| 276 | Ga0075429_100005348 | |||
| 277 | Ga0075429_100008061 | |||
| 278 | Ga0075436_100049132 | |||
| 279 | Ga0075435_100005631 | |||
| 280 | Ga0111539_10051500 | |||
| 281 | Ga0105245_10000953 | |||
| 282 | Ga0114129_10003435 | |||
| 283 | Ga0114129_10003865 | |||
| 284 | Ga0114129_10008499 | |||
| 285 | Ga0114129_10052281 | |||
| 286 | Ga0105248_10053510 | |||
| 287 | Ga0157369_10056811 | |||
| 288 | Ga0157369_10177967 | |||
| 289 | Ga0157379_10169564 | |||
| 290 | Ga0206353_10894903 | |||
| 291 | Ga0206353_11649616 | |||
| 292 | Ga0209672_100011 | |||
| 293 | Ga0209147_101032 | |||
| 294 | Ga0207427_100028 | |||
| 295 | Ga0209437_100854 | |||
| 296 | Ga0209258_101931 | |||
| 297 | Ga0209148_1000023 | |||
| 298 | Ga0209233_1000001 | |||
| 299 | Ga0209455_1000023 | |||
| 300 | Ga0207647_10074722 | |||
| 301 | Ga0207705_10003751 | |||
| 302 | Ga0207657_10029372 | |||
| 303 | Ga0207657_10053106 | |||
| 304 | Ga0207687_10002705 | |||
| 305 | Ga0207700_10014177 | |||
| 306 | Ga0207664_10079494 | |||
| 307 | Ga0207664_10080668 | |||
| 308 | Ga0207690_10040767 | |||
| 309 | Ga0207711_10177682 | |||
| 310 | Ga0207679_10047101 | |||
| 311 | Ga0207678_10024514 | |||
| 312 | Ga0207674_10089547 | |||
| 313 | Ga0207683_10034705 | |||
| 314 | Ga0207698_10241510 | |||
| 315 | Ga0307515_10000294 | |||
| 316 | Ga0265340_10014328 | |||
| 317 | Ga0307513_10125566 | |||
| 318 | Ga0307508_10002002 | |||
| 319 | Ga0307508_10024381 | |||
| 320 | Ga0307514_10004846 | |||
| 321 | Ga0307516_10000514 | |||
| 322 | Ga0307406_10000886 | |||
| 323 | Ga0307406_10104093 | |||
| 324 | Ga0307407_10042472 | |||
| 325 | Ga0307409_100243862 | |||
| 326 | Ga0373951_0004293 | |||
| 327 | Ga0395899_0015238 | |||
| 328 | Ga0395899_0123474 | |||
| 329 | Ga0395898_0000100 | |||
| 330 | Ga0436365_0464662 | |||
| 331 | Ga0466965_0043571 | |||
| 332 | Ga0466963_0046967 | |||
| 333 | Ga0466970_0048115 | |||
| 334 | Ga0466957_0037633 | |||
| 335 | Ga0466957_0051290 | |||
| 336 | Ga0466959_0110252 | |||
| 337 | Ga0466958_0066969 | |||
| 338 | Ga0466967_0128849 | |||
| 339 | Ga0466967_0315331 | |||
| 340 | Ga0466967_0405966 | |||
| 341 | Ga0495627_000917 | |||
| 342 | Ga0495672_0106903 | |||
| 343 | Ga0496104_0041010 | |||
| 344 | Ga0496104_0097651 | |||
| 345 | Ga0496104_0348816 | |||
| 346 | Ga0496105_0025496 | |||
| 347 | Ga0496105_0077894 | |||
| 348 | Ga0496105_0130260 | |||
| 349 | Ga0496108_0007822 | |||
| 350 | Ga0496109_0116063 | |||
| 351 | Ga0496109_0141654 | |||
| 352 | Ga0496110_0006263 | |||
| 353 | Ga0496111_0015455 | |||
| 354 | Ga0496112_0173492 | |||
| 355 | Ga0496112_0207458 | |||
| 356 | Ga0496113_0027998 | |||
| 357 | Ga0496114_0052471 | |||
| 358 | Ga0496117_0022367 | |||
| 359 | Ga0496118_0003744 | |||
| 360 | Ga0496119_0055823 | |||
| 361 | Ga0496125_0001688 | |||
| 362 | Ga0496126_0069252 | |||
| 363 | Ga0501032_0008389 | |||
| 364 | Ga0501032_0027066 | |||
| 365 | Ga0501034_0007246 | |||
| 366 | Ga0501034_0014201 | |||
| 367 | Ga0501034_0025256 | |||
| 368 | Ga0501036_0005222 | |||
| 369 | Ga0501036_0005813 | |||
| 370 | Ga0501036_0160950 | |||
| 371 | Ga0501037_0003428 | |||
| 372 | Ga0501037_0024259 | |||
| 373 | Ga0501038_0005745 | |||
| 374 | Ga0501038_0151190 | |||
| 375 | Ga0501039_0034608 | |||
| 376 | Ga0501039_0040874 | |||
| 377 | Ga0501039_0203772 | |||
| 378 | Ga0501041_0066488 | |||
| 379 | Ga0501042_0005205 | |||
| 380 | Ga0501043_0006073 | |||
| 381 | Ga0501043_0140351 | |||
| 382 | Ga0501046_0000505 | |||
| 383 | Ga0501046_0014277 | |||
| 384 | Ga0501046_0023867 | |||
| 385 | Ga0501047_0087512 | |||
| 386 | Ga0501048_0004271 | |||
| 387 | Ga0501068_0008839 | |||
| 388 | Ga0501068_0039664 | |||
| 389 | Ga0501070_0018873 | |||
| 390 | Ga0501070_0040349 | |||
| 391 | Ga0501070_0164251 | |||
| 392 | Ga0501072_0007304 | |||
| 393 | Ga0501073_0027372 | |||
| 394 | Ga0501073_0075326 | |||
| 395 | Ga0501073_0087462 | |||
| 396 | Ga0501074_0091261 | |||
| 397 | Ga0501075_0041968 | |||
| 398 | Ga0501077_0076352 | |||
| 399 | Ga0501079_0018053 | |||
| 400 | Ga0501079_0160319 | |||
| 401 | Ga0501080_0055371 | |||
| 402 | Ga0501081_0006606 | |||
| 403 | Ga0501035_0031676 | |||
| 404 | Ga0501044_0064550 | |||
| 405 | Ga0501044_0131390 | |||
| 406 | Ga0501044_0222771 | |||
| 407 | Ga0501045_0036306 | |||
| 408 | Ga0501045_0100216 | |||
| 409 | nmdc:mga03n38_18696_c1 | |||
| 410 | nmdc:mga00v17_130699_c1 | |||
| 411 | nmdc:mga00v17_178524_c1 | |||
| 412 | nmdc:mga00v17_32014_c1 | |||
| 413 | nmdc:mga00v17_48998_c1 | |||
| 414 | nmdc:mga00v17_58538_c1 | |||
| 415 | nmdc:mga0yw44_7383_c1 | |||
| 416 | nmdc:mga06z11_14504_c1 | |||
| 417 | nmdc:mga07m45_43780_c1 | |||
| 418 | nmdc:mga05p37_37336_c1 | |||
| 419 | nmdc:mga05p37_56156_c1 | |||
| 420 | nmdc:mga05p37_9085_c1 | |||
| 421 | nmdc:mga09592_290_c1 | |||
| 422 | nmdc:mga0qj67_4691_c1 | |||
| 423 | nmdc:mga0qj67_74_c1 | |||
| 424 | nmdc:mga0qj67_8685_c1 | |||
| 425 | nmdc:mga06r32_16704_c1 | |||
| 426 | nmdc:mga06r32_18095_c1 | |||
| 427 | nmdc:mga06r32_377_c1 | |||
| 428 | nmdc:mga0n895_17529_c1 | |||
| 429 | nmdc:mga0rr50_40112_c1 | |||
| 430 | nmdc:mga08x19_34444_c1 | |||
| 431 | nmdc:mga0a205_27077_c1 | |||
| 432 | Ga0500635_0000276 | |||
| 433 | Ga0500646_0015952 | |||
| 434 | Ga0500559_0000182 | |||
| 435 | Ga0500568_0005223 | |||
| 436 | Ga0500568_0012901 | |||
| 437 | Ga0500616_0000117 | |||
| 438 | Ga0501084_0069471 | |||
| 439 | Ga0530510_0004060 | |||
| 440 | 2932433936 | |||
| 441 | 2501942548 | |||
| 442 | 2643876848 | |||
| 443 | 2644102238 | |||
| 444 | 2644115462 | |||
| 445 | 2644175705 | |||
| 446 | 2644197843 | |||
| 447 | 2644383903 | |||
| 448 | 2676477917 | |||
| 449 | 2676480606 | |||
| 450 | 2808900524 | |||
| 451 | 2827629241 | |||
| 452 | 2855689195 | |||
| 453 | 2856860838 | |||
| 454 | 2857484476 | |||
| 455 | 2884766841 | |||
| 456 | 2895663089 | |||
| 457 | 2904511420 | |||
| 458 | 2919445113 | |||
| 459 | 2977231986 | |||
| 460 | 2977237345 | |||
| 461 | 2984544869 | |||
| 462 | 2997604100 | |||
| 463 | 649811588 | |||
| 464 | 8003858593 | |||
| 465 | 8004185849 | |||
| 466 | 8004214710 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2g3f-assembly1.cif.gz_A | crystal structure of imidazolonepropionase complexed with imidazole-4-acetic acid sodium salt, a substrate homologue | 0.9424 | 2 | 383 |
| 2g3f-assembly1.cif.gz_A | crystal structure of imidazolonepropionase complexed with imidazole-4-acetic acid sodium salt, a substrate homologue | 0.9329 | 2 | 383 |
| 2puz-assembly1.cif.gz_B | crystal structure of imidazolonepropionase from agrobacterium tumefaciens with bound product n-formimino-l-glutamate | 0.9323 | 2 | 383 |
| 2puz-assembly1.cif.gz_B | crystal structure of imidazolonepropionase from agrobacterium tumefaciens with bound product n-formimino-l-glutamate | 0.923 | 2 | 383 |
| 2oof-assembly1.cif.gz_A | the crystal structure of 4-imidazolone-5-propanoate amidohydrolase from environmental sample | 0.9198 | 4 | 383 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q4CLJ4_1_196_3.20.20.140 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases | 0.9489 | 160 | 344 | 3.20.20.140 |
| af_Q22419_88_385_3.20.20.140 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases | 0.9488 | 66 | 345 | 3.20.20.140 |
| 2g3fA02 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases | 0.9471 | 66 | 343 | 3.20.20.140 |
| 2q09A02 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases | 0.917 | 66 | 344 | 3.20.20.140 |
| af_Q4CLJ4_1_196_3.20.20.140 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases | 0.8925 | 160 | 344 | 3.20.20.140 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A6B3G3J1-F1-model_v4 | Imidazolonepropionase (EC 3.5.2.7) | 0.9986 | 160 | 263 |
GO:0005737
GO:0019556 GO:0046872 GO:0050480 |
| AF-A0A838HBX0-F1-model_v4 | imidazolonepropionase (EC 3.5.2.7) | 0.9963 | 99 | 384 |
GO:0005737
GO:0019556 GO:0046872 GO:0050480 |
| AF-A0A6I3FY56-F1-model_v4 | imidazolonepropionase (EC 3.5.2.7) | 0.9957 | 115 | 383 |
GO:0005737
GO:0019556 GO:0046872 GO:0050480 |
| AF-A0A4D4KZ58-F1-model_v4 | imidazolonepropionase (EC 3.5.2.7) | 0.9933 | 180 | 383 |
GO:0005737
GO:0019556 GO:0046872 GO:0050480 |
| AF-A0A6G6W7X0-F1-model_v4 | Imidazolonepropionase (EC 3.5.2.7) (Imidazolone-5-propionate hydrolase) | 0.9919 | 55 | 383 |
GO:0005506
GO:0005737 GO:0008270 GO:0019556 GO:0019557 GO:0050480 |