F346563

General Info

Members Datasets Scaffolds Average Seq Length
233 200 126 603

Family's Representative Sequence

Representative Sequence 3300053153|Ga0500616_0014654|Ga0500616_0014654_21_1718
Length 560
Sequence VSDALSPSANLRRAFKALSDYADPALFISVKPEAAALAEAAALEAAGPAGKPLYGMVFAVKDNIDAAGLETTAACPAFAYAPGGSAFVVKRLEDAGAIVLGKTNLDQFATGLVGVRSPYGVPRNALRADLIPGGSSSGSAVAVAAGIVDFSLGTDTAGSGRIPAGMNGIVGLKPSLGLLSSTGMVPACRTLDTISVFARDVATAVAVTYDAADAYSRVLPAPVLGAAPPSFRVGVPKPEQRKFFGDAVAEAAFAADVERLTTLGATIVELDFEPLHAVARLLYEGPWVAERYAATKPLIETNPEAFFPTTLKIIGGAKGLTAVSAFEATYKLADLRRATAPIFAQVDVLAVPTVPRAYTVAELEAEPITLNSNLGSYTNFVNLLDMAAIAVPSGMRGDGLPSSLTFVGKAGADGYLASIAAAVEGRAATGPVRAPGKIEVAVVGAHLSGLPLNGELTGLGGTFVRSGTTVPEYSLFALPGTVPAKPGLLRGGSAAIAVEVWALDAAGFGEFVSKIPAPLGIGTVALSDGTAVKGFLVEATAVAGAEDISRFGGWRSYLAR

Samples

Sample ID Description Type Environment
1 2503198000 Mesorhizobium opportunistum WSM2075 Isolate Nodule
2 2508501123 Mesorhizobium sp. WSM3626 Isolate Nodule
3 2508501127 Mesorhizobium sp. WSM2561 Isolate Nodule
4 2510917028 Rhizobium sp. CF122 Isolate Rhizosphere
5 2512875016 Mesorhizobium japonicum R7A Isolate Nodule
6 2512875024 Mesorhizobium loti R88b Isolate Nodule
7 2513237164 Mesorhizobium loti CJ3sym Isolate Nodule
8 2513237305 Mesorhizobium amorphae CCNWGS0123 Isolate Nodule
9 2534681796 Rhizobium grahamii CCGE 502 Isolate Nodule
10 2558860100 Sinorhizobium sp. PC2 Isolate Nodule
11 2582581294 Rhizobium sp. CF394 Isolate Rhizosphere
12 2582581304 Rhizobium sp. YR519 Isolate Rhizosphere
13 2582581866 Rhizobium sp. CF097 Isolate Rhizosphere
14 2582581867 Rhizobium sp. OV201 Isolate Rhizosphere
15 2585427531 Agrobacterium rhizogenes YR530 Isolate Rhizosphere
16 2585427590 Rhizobium sp. CF048 Isolate Rhizosphere
17 2585427594 Rhizobium sp. YR528 Isolate Rhizosphere
18 2585427608 Agrobacterium rhizogenes OV677 Isolate Rhizosphere
19 2585427633 Neorhizobium galegae bv. officinalis HAMBI 1141 Isolate Nodule
20 2585427634 Neorhizobium galegae bv. orientalis HAMBI 540 Isolate Nodule
21 2597489875 Mesorhizobium ciceri ca181 Isolate Unclassified
22 2599185301 Mesorhizobium sp. NFR06 Isolate Rhizoplane
23 2617270742 Rhizobium miluonense HAMBI 2971 Isolate Nodule
24 2643221629 Devosia sp. Root105 Isolate Unclassified
25 2643221662 Devosia sp. Root413D1 Isolate Unclassified
26 2667528174 Rhizobium sp. NFR17 Isolate Rhizoplane
27 2721755686 Mesorhizobium amorphae CCNWGS0123 Isolate Nodule
28 2738541293 Rhizobium sp. GV031 Isolate Unclassified
29 2775507049 Rhizobium sp. ACO-34A Isolate Unclassified
30 2775507266 Rhizobium tropici PRF 81 Isolate Nodule
31 2818991448 Rhizobium miluonense 1234 Isolate Unclassified
32 2838029111 Rhizobium tropici SEMIA 4079 Isolate Nodule
33 2841734538 Mesorhizobium sp. M6A.T.Cr.TU.016.01.1.1 Isolate Nodule
34 2842475841 Rhizobium tropici SEMIA 4059 Isolate Nodule
35 2842502639 Rhizobium tropici SEMIA 4063 Isolate Nodule
36 2844009547 Mesorhizobium sp. M7A.F.Ce.TU.012.03.2.1 Isolate Nodule
37 2852387548 Rhizobium jaguaris CCGE525 Isolate Unclassified
38 2856320880 Mesorhizobium sp. M8A.F.Ca.ET.165.01.1.1 Isolate Nodule
39 2856342000 Mesorhizobium sp. M5C.F.Cr.IN.023.01.1.1 Isolate Nodule
40 2869234852 Mesorhizobium sp. M7A.T.Ca.US.000.02.2.1 Isolate Nodule
41 2869256925 Mesorhizobium sp. M7A.F.Ca.MR.176.00.0.0 Isolate Nodule
42 2869278585 Mesorhizobium sp. M8A.F.Ca.ET.198.01.1.1 Isolate Nodule
43 2871435913 Mesorhizobium sp. M7A.F.Ca.MR.228.00.0.0 Isolate Nodule
44 2871474448 Mesorhizobium sp. M6A.T.Cr.TU.017.01.1.1 Isolate Nodule
45 2874102143 Mesorhizobium sp. M1A.F.Ca.IN.022.04.1.1 Isolate Nodule
46 2874123672 Mesorhizobium sp. M00.F.Ca.ET.216.01.1.1 Isolate Nodule
47 2874139085 Mesorhizobium sp. M8A.F.Ca.ET.207.01.1.1 Isolate Nodule
48 2874168670 Mesorhizobium kowhaii Ach-343 Isolate Nodule
49 2876363079 Mesorhizobium loti R7ANS::ICEMlSym2042 Isolate Nodule
50 2878738818 Mesorhizobium sp. M8A.F.Ca.ET.218.01.1.1 Isolate Nodule
51 2882632389 Mesorhizobium waimense ICMP19557 Isolate Unclassified
52 2888337043 Mesorhizobium sp. M8A.F.Ca.ET.057.01.1.1 Isolate Nodule
53 2888343758 Mesorhizobium sp. AA22 Isolate Unclassified
54 2899803654 Agrobacterium sp. a22-2 Isolate Unclassified
55 2903448605 Mesorhizobium japonicum Opo-235 Isolate Nodule
56 2903521522 Mesorhizobium loti R7ANS::ICEMlSym2014 Isolate Nodule
57 2903528002 Mesorhizobium loti R7ANS::ICEMlSym2037 Isolate Nodule
58 2913295892 Sinorhizobium kostiensis DSM 13372 Isolate Nodule
59 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
60 2919171160 Neorhizobium sp. 2083 Isolate Unclassified
61 2919408235 Rhizobium miluonense 3199 Isolate Unclassified
62 2923556063 Rhizobium tibeticum 3740 Isolate Unclassified
63 2924710171 Mesorhizobium sp. M7A.T.Ca.TU.009.01.3.2 Isolate Nodule
64 2924718760 Mesorhizobium sp. M8A.F.Ca.ET.023.01.1.1 Isolate Nodule
65 2924776078 Mesorhizobium sp. M8A.F.Ca.ET.213.01.1.1 Isolate Nodule
66 2937822353 Mesorhizobium neociceri CCANP35 Isolate Nodule
67 2937836603 Mesorhizobium sp. M6A.T.Cr.TU.014.01.1.1 Isolate Nodule
68 2937877337 Mesorhizobium sp. M8A.F.Ca.ET.161.01.1.1 Isolate Nodule
69 2937972304 Mesorhizobium sp. M8A.F.Ca.ET.173.01.1.1 Isolate Nodule
70 2958034702 Mesorhizobium sp. M8A.F.Ca.ET.202.01.1.1 Isolate Nodule
71 2958041894 Mesorhizobium sp. M00.F.Ca.ET.149.01.1.1 Isolate Nodule
72 2958064165 Mesorhizobium sp. SARCC-RB16n Isolate Unclassified
73 2958071322 Mesorhizobium sp. M6A.T.Ce.TU.016.01.1.1 Isolate Nodule
74 2958084443 Mesorhizobium sp. M8A.F.Ca.ET.142.01.1.1 Isolate Nodule
75 2958092219 Mesorhizobium sp. M8A.F.Ca.ET.059.01.1.1 Isolate Nodule
76 2958144490 Mesorhizobium sp. M8A.F.Ca.ET.021.01.1.1 Isolate Nodule
77 2963644680 Mesorhizobium japonicum R7A Isolate Nodule
78 2968016561 Mesorhizobium sp. M8A.F.Ca.ET.182.01.1.1 Isolate Nodule
79 2968083720 Mesorhizobium erdmanii Opo-242 Isolate Unclassified
80 2970469710 Mesorhizobium sp. M8A.F.Ca.ET.181.01.1.1 Isolate Nodule
81 2970510686 Mesorhizobium sp. M7A.F.Ca.MR.148.00.0.0 Isolate Nodule
82 2970540015 Mesorhizobium sp. M5C.F.Ca.IN.020.29.1.1 Isolate Nodule
83 2970593180 Mesorhizobium sp. M8A.F.Ca.ET.197.01.1.1 Isolate Nodule
84 2970619444 Mesorhizobium sp. M7A.F.Ca.ET.027.02.1.1 Isolate Nodule
85 2977858184 Mesorhizobium sp. M1A.F.Ca.IN.020.03.1.1 Isolate Nodule
86 2977898635 Mesorhizobium sp. M7A.T.Ca.TU.009.01.3.1 Isolate Nodule
87 2977922695 Mesorhizobium sp. WSM4305 Isolate Unclassified
88 2996348954 Mesorhizobium sp. M8A.F.Ca.ET.167.01.1.1 Isolate Nodule
89 2996887358 Rhizobium sp. R711 Isolate Nodule
90 3000135777 Unclassified bacterium M00.F.Ca.ET.205.01.1.1 Isolate Unclassified
91 3003930520 Sinorhizobium sp. BG8 Isolate Unclassified
92 3004211236 Mesorhizobium sp. WSM4307 Isolate Unclassified
93 3004218560 Mesorhizobium sp. WSM4315 Isolate Unclassified
94 3004232784 Mesorhizobium sp. M7A.T.Ca.US.000.02.1.1 Isolate Nodule
95 3004275668 Mesorhizobium sp. M8A.F.Ca.ET.208.01.1.1 Isolate Nodule
96 3005452660 Rhizobium grahamii BG7 Isolate Unclassified
97 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
98 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
99 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
100 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
101 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
102 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
103 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
104 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
105 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
106 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
107 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
108 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
109 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
110 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
111 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
112 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
113 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
114 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
115 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
116 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
117 3300009763 Root nodule microbial communities of legume samples collected from Mexico - Siratro Mexico nodule mix Metagenome Nodule
118 3300009765 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico pink nodule Metagenome Nodule
119 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
120 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
121 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
122 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
123 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
124 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
125 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
126 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
127 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
128 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
129 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
130 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
131 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
132 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
133 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
134 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
135 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
136 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
137 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
138 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
139 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
140 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
142 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
143 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
144 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
145 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
146 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
147 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
148 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
149 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
150 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
151 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
152 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
153 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
154 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
155 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
156 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
157 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
158 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
159 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
160 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
161 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
162 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
163 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
164 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
165 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
166 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
167 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
168 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
169 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
170 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
171 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
172 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
173 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
174 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
175 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
176 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
177 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
178 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
179 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
180 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
181 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
182 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
183 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
184 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
185 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
186 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
187 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
188 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
189 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
190 637000159 Mesorhizobium japonicum MAFF 303099 Isolate Unclassified
191 643692032 Sinorhizobium fredii NGR234 Isolate Nodule
192 8004445564 Mesorhizobium sp. M1A.F.Ca.IN.020.04.1.1 Isolate Nodule
193 8004633249 Mesorhizobium sp. M6A.T.Ce.TU.002.03.1.1 Isolate Nodule
194 8005258706 Rhizobium sp. R693 Isolate Nodule
195 8005321885 Rhizobium sp. R72 Isolate Nodule
196 8005542996 Rhizobium grahamii CCGM3 Isolate Unclassified
197 8005645114 Rhizobium tropici IGFRI Rhizo-19 Isolate Rhizosphere
198 8024486573 Rhizobium tubonense CCBAU 85046 Isolate Nodule
199 8046767195 Rhizobium calliandrae CCGE524 Isolate Unclassified
200 8055617313 Mesorhizobium onobrychidis OM4 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 54.08
Metatranscriptomes 0
Isolates 45.92

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 19.31
Nodule 32.19
Rhizoplane 3
Rhizosphere 21.46
Stem 0
Stem Tuber 0
Unclassified 24.03

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10000003 3300001979 Bacteria 127453
2 JGI25162J39368_1000069 3300002737 Bacteria 125244
3 JGI25152J39213_1001418 3300002773 Bacteria 10379
4 JGI25150J39212_1000010 3300002774 Bacteria 236260
5 JGI25151J46595_10000026 3300003187 Bacteria 211045
6 JGI25165J46597_1000018 3300003214 Bacteria 374701
7 JGI25153J46596_10005939 3300003215 Bacteria 6292
8 rootH1_10040367 3300003316 Bacteria 11432
9 rootL2_10009173 3300003322 Bacteria 30207
10 Ga0055526_1001610 3300003771 Bacteria 15842
11 Ga0055536_1001115 3300003781 Bacteria 16861
12 Ga0055528_1000096 3300003790 Bacteria 70375
13 Ga0055531_10005662 3300003794 Bacteria 7258
14 Ga0070670_100036429 3300005331 Bacteria 4234
15 Ga0070661_100015019 3300005344 Bacteria 5464
16 Ga0081539_10000459 3300005985 Bacteria 86528
17 Ga0075365_10012909 3300006038 Bacteria 4978
18 Ga0075367_10006877 3300006178 Bacteria 5788
19 Ga0075369_10003191 3300006186 Bacteria 5947
20 Ga0105240_10116223 3300009093 Bacteria 3228
21 Ga0123340_1041959 3300009763 Bacteria 2070
22 Ga0123341_1056017 3300009765 Bacteria 2070
23 Ga0105239_10048676 3300010375 Bacteria 4648
24 Ga0163162_10008826 3300013306 Bacteria 9801
25 Ga0157375_10014514 3300013308 Bacteria 7028
26 Ga0214544_1000906 3300021320 Bacteria 58379
27 Ga0214542_1000400 3300021321 Bacteria 76349
28 Ga0214543_1000019 3300021327 Bacteria 267908
29 Ga0207427_101700 3300025231 Bacteria 7302
30 Ga0209437_100022 3300025233 Bacteria 625694
31 Ga0207425_1000010 3300025245 Bacteria 572898
32 Ga0209129_1000197 3300025258 Bacteria 78908
33 Ga0209129_1001986 3300025258 Bacteria 10630
34 Ga0209233_1000031 3300025261 Bacteria 624646
35 Ga0209233_1000541 3300025261 Bacteria 21347
36 Ga0209673_1000252 3300025273 Bacteria 101552
37 Ga0209673_1006322 3300025273 Bacteria 5747
38 Ga0209673_1008864 3300025273 Bacteria 4428
39 Ga0209676_1000019 3300025292 Bacteria 620012
40 Ga0209676_1002049 3300025292 Bacteria 15759
41 Ga0209025_1000022 3300025294 Bacteria 574487
42 Ga0209025_1002306 3300025294 Bacteria 20689
43 Ga0209758_1000086 3300025297 Bacteria 254778
44 Ga0209758_1000688 3300025297 Bacteria 50116
45 Ga0209050_1005653 3300025298 Bacteria 7741
46 Ga0209050_1016337 3300025298 Bacteria 3045
47 Ga0209256_1000786 3300025299 Bacteria 40946
48 Ga0207426_1002795 3300025302 Bacteria 10477
49 Ga0209051_1002500 3300025303 Bacteria 13097
50 Ga0209257_1005745 3300025304 Bacteria 8484
51 Ga0207650_10001958 3300025925 Bacteria 14473
52 Ga0207678_10118783 3300026067 Bacteria 2256
53 Ga0307515_10000375 3300028794 Bacteria 109285
54 Ga0265339_10004173 3300031249 Bacteria 9917
55 Ga0265327_10012494 3300031251 Bacteria 5723
56 Ga0307513_10000335 3300031456 Bacteria 67961
57 Ga0265313_10001586 3300031595 Bacteria 21094
58 Ga0439435_0009506 3300042436 Bacteria 2283
59 Ga0495638_0000420 3300046460 Bacteria 51327
60 Ga0495638_0031561 3300046460 Bacteria 3403
61 Ga0495583_0003372 3300046506 Bacteria 12271
62 Ga0495583_0021146 3300046506 Bacteria 3352
63 Ga0495606_0000848 3300046507 Bacteria 45957
64 Ga0495610_0010647 3300046512 Bacteria 5696
65 Ga0495620_0039868 3300046515 Bacteria 2072
66 Ga0495632_0004193 3300046519 Bacteria 9860
67 Ga0495643_0007745 3300046522 Bacteria 6877
68 Ga0495643_0010332 3300046522 Bacteria 5747
69 Ga0495648_0014179 3300046524 Bacteria 5848
70 Ga0495663_0001716 3300046525 Bacteria 6806
71 Ga0495622_0035846 3300046557 Bacteria 2313
72 Ga0495625_0009342 3300046660 Bacteria 8214
73 Ga0495625_0030672 3300046660 Bacteria 4008
74 Ga0495588_0000378 3300046674 Bacteria 25869
75 Ga0495670_0014478 3300046691 Bacteria 3878
76 Ga0495671_0000867 3300046692 Bacteria 21672
77 Ga0495649_0001953 3300046694 Bacteria 14990
78 Ga0495687_006530 3300047443 Bacteria 7125
79 Ga0495681_0000678 3300047470 Bacteria 25887
80 Ga0495686_0000296 3300047472 Bacteria 86346
81 Ga0496102_0083303 3300048905 Bacteria 2951
82 Ga0496109_0020241 3300048912 Bacteria 5876
83 Ga0496110_0000214 3300048913 Bacteria 37211
84 Ga0496110_0011003 3300048913 Bacteria 7383
85 Ga0496112_0082086 3300048915 Bacteria 3188
86 Ga0496116_0003396 3300048919 Bacteria 15767
87 Ga0496116_0013786 3300048919 Bacteria 6493
88 Ga0496116_0020125 3300048919 Bacteria 5079
89 Ga0496117_0012124 3300048920 Bacteria 7643
90 Ga0496117_0013898 3300048920 Bacteria 6979
91 Ga0496118_0021379 3300048921 Bacteria 5697
92 Ga0496118_0022580 3300048921 Bacteria 5494
93 Ga0496119_0014776 3300048922 Bacteria 6077
94 Ga0496120_0022015 3300048923 Bacteria 4015
95 Ga0496121_0004588 3300048924 Bacteria 18420
96 Ga0496121_0051672 3300048924 Bacteria 3459
97 Ga0496121_0072426 3300048924 Bacteria 2766
98 Ga0496122_0006070 3300048925 Bacteria 14077
99 Ga0496122_0022093 3300048925 Bacteria 5668
100 Ga0496122_0027563 3300048925 Bacteria 4852
101 Ga0496122_0047377 3300048925 Bacteria 3319
102 Ga0496123_0004386 3300048926 Bacteria 14875
103 Ga0496123_0023238 3300048926 Bacteria 4749
104 Ga0496123_0065421 3300048926 Bacteria 2311
105 Ga0496124_0004324 3300048927 Bacteria 16651
106 Ga0496124_0010829 3300048927 Bacteria 9184
107 Ga0496124_0013839 3300048927 Bacteria 7846
108 Ga0496125_0004658 3300048928 Bacteria 15641
109 Ga0496125_0032561 3300048928 Bacteria 4630
110 Ga0496125_0056456 3300048928 Bacteria 3188
111 Ga0496126_0042292 3300048929 Bacteria 4209
112 Ga0496126_0070857 3300048929 Bacteria 3105
113 Ga0496126_0226643 3300048929 Bacteria 1567
114 Ga0495678_001350 3300049459 Bacteria 19638
115 Ga0495682_0005253 3300049460 Bacteria 5412
116 Ga0501034_0089261 3300049571 Bacteria 3080
117 nmdc:mga03n38_1298_c1 3300050490 Bacteria 7048
118 nmdc:mga0yw44_23732_c1 3300050492 Bacteria 3460
119 nmdc:mga0k408_56526_c1 3300050493 Bacteria 2277
120 nmdc:mga06z11_672_c1 3300050494 Bacteria 12432
121 nmdc:mga06z11_8084_c1 3300050494 Bacteria 4366
122 nmdc:mga0sz30_7667_c1 3300050516 Bacteria 4052
123 Ga0500616_0000102 3300053153 Bacteria 168834
124 Ga0500616_0014654 3300053153 Bacteria 4498
125 Ga0500636_0000011 3300053177 Bacteria 140769
126 Ga0500636_0000121 3300053177 Bacteria 40628

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2924710171 2924710313 489
2 3300048929 Ga0496126_0226643 Ga0496126_0226643_10_1524 501
3 iso_pu_bacteria 2977858184 2977859978 533
4 3300053153 Ga0500616_0014654 Ga0500616_0014654_21_1718 559
5 3300048929 Ga0496126_0070857 Ga0496126_0070857_1128_2834 561
6 iso_pu_bacteria 2643221629 2644165812 565
7 iso_pu_bacteria 2643221662 2644351120 565
8 3300050493 nmdc:mga0k408_56526_c1 nmdc:mga0k408_56526_c1_437_2146 568
9 3300005344 Ga0070661_100015019 Ga0070661_1000150192 569
10 3300042436 Ga0439435_0009506 Ga0439435_0009506_435_2150 569
11 3300003316 rootH1_10040367 rootH1_100403674 577
12 iso_pu_bacteria 2874102143 2874107845 589
13 iso_pu_bacteria 8004445564 8004448376 589
14 iso_pu_bacteria 2917699015 2917699586 590
15 iso_pu_bacteria 2512875024 2512961614 591
16 iso_pu_bacteria 2513237164 2514035704 591
17 iso_pu_bacteria 2599185301 2599936932 591
18 iso_pu_bacteria 2874168670 2874176769 591
19 3300013306 Ga0163162_10008826 Ga0163162_100088265 592
20 3300013308 Ga0157375_10014514 Ga0157375_100145144 592
21 iso_pu_bacteria 2503198000 2503200172 593
22 3300048919 Ga0496116_0003396 Ga0496116_0003396_13606_15414 594
23 3300048920 Ga0496117_0012124 Ga0496117_0012124_4144_5952 594
24 3300048921 Ga0496118_0021379 Ga0496118_0021379_2597_4405 594
25 3300048924 Ga0496121_0004588 Ga0496121_0004588_10518_12326 594
26 3300048925 Ga0496122_0006070 Ga0496122_0006070_2386_4194 594
27 3300048926 Ga0496123_0004386 Ga0496123_0004386_10680_12488 594
28 3300048927 Ga0496124_0013839 Ga0496124_0013839_3651_5459 594
29 3300048928 Ga0496125_0004658 Ga0496125_0004658_10884_12692 594
30 iso_pu_bacteria 2508501123 2509116349 594
31 iso_pu_bacteria 2512875016 2512929170 594
32 iso_pu_bacteria 2513237305 2514420245 594
33 iso_pu_bacteria 2585427594 2585845931 594
34 iso_pu_bacteria 2597489875 2597815547 594
35 iso_pu_bacteria 2721755686 2723575761 594
36 iso_pu_bacteria 2844009547 2844009608 594
37 iso_pu_bacteria 2856320880 2856326775 594
38 iso_pu_bacteria 2869234852 2869240720 594
39 iso_pu_bacteria 2869256925 2869264020 594
40 iso_pu_bacteria 2869278585 2869283672 594
41 iso_pu_bacteria 2871435913 2871439387 594
42 iso_pu_bacteria 2874123672 2874128927 594
43 iso_pu_bacteria 2874139085 2874143633 594
44 iso_pu_bacteria 2876363079 2876367271 594
45 iso_pu_bacteria 2878738818 2878738898 594
46 iso_pu_bacteria 2882632389 2882637061 594
47 iso_pu_bacteria 2903448605 2903453260 594
48 iso_pu_bacteria 2903521522 2903526762 594
49 iso_pu_bacteria 2903528002 2903530619 594
50 iso_pu_bacteria 2924718760 2924725308 594
51 iso_pu_bacteria 2924776078 2924776260 594
52 iso_pu_bacteria 2937822353 2937827645 594
53 iso_pu_bacteria 2937877337 2937884283 594
54 iso_pu_bacteria 2937972304 2937979615 594
55 iso_pu_bacteria 2958034702 2958040184 594
56 iso_pu_bacteria 2958041894 2958054528 594
57 iso_pu_bacteria 2958064165 2958065062 594
58 iso_pu_bacteria 2958084443 2958091594 594
59 iso_pu_bacteria 2958092219 2958098282 594
60 iso_pu_bacteria 2958144490 2958150929 594
61 iso_pu_bacteria 2963644680 2963650064 594
62 iso_pu_bacteria 2968016561 2968019025 594
63 iso_pu_bacteria 2968083720 2968086626 594
64 iso_pu_bacteria 2970469710 2970470802 594
65 iso_pu_bacteria 2970510686 2970517288 594
66 iso_pu_bacteria 2970593180 2970597903 594
67 iso_pu_bacteria 2970619444 2970625380 594
68 iso_pu_bacteria 2977898635 2977906924 594
69 iso_pu_bacteria 2977922695 2977923191 594
70 iso_pu_bacteria 2996348954 2996356662 594
71 iso_pu_bacteria 3000135777 3000139728 594
72 iso_pu_bacteria 3004211236 3004213516 594
73 iso_pu_bacteria 3004218560 3004223107 594
74 iso_pu_bacteria 3004232784 3004235549 594
75 iso_pu_bacteria 3004275668 3004282965 594
76 iso_pu_bacteria 637000159 637078929 594
77 iso_pu_bacteria 2508501127 2509141311 595
78 iso_pu_bacteria 2510917028 2511183729 595
79 iso_pu_bacteria 2534681796 2535520722 595
80 iso_pu_bacteria 2582581294 2585199942 595
81 iso_pu_bacteria 2582581304 2585254479 595
82 iso_pu_bacteria 2582581867 2585403137 595
83 iso_pu_bacteria 2585427531 2585563882 595
84 iso_pu_bacteria 2585427590 2585823960 595
85 iso_pu_bacteria 2585427608 2585902515 595
86 iso_pu_bacteria 2617270742 2617384579 595
87 iso_pu_bacteria 2738541293 2738801902 595
88 iso_pu_bacteria 2775507049 2776912542 595
89 iso_pu_bacteria 2775507266 2778173913 595
90 iso_pu_bacteria 2818991448 2819611846 595
91 iso_pu_bacteria 2841734538 2841735353 595
92 iso_pu_bacteria 2856342000 2856345688 595
93 iso_pu_bacteria 2871474448 2871476166 595
94 iso_pu_bacteria 2888337043 2888339807 595
95 iso_pu_bacteria 2888343758 2888349357 595
96 iso_pu_bacteria 2923556063 2923559357 595
97 iso_pu_bacteria 2937836603 2937842169 595
98 iso_pu_bacteria 2958071322 2958075650 595
99 iso_pu_bacteria 2970540015 2970542704 595
100 iso_pu_bacteria 2996887358 2996887816 595
101 iso_pu_bacteria 3005452660 3005454068 595
102 iso_pu_bacteria 8004633249 8004636826 595
103 iso_pu_bacteria 8005258706 8005259162 595
104 iso_pu_bacteria 8005321885 8005322343 595
105 iso_pu_bacteria 8005542996 8005548489 595
106 iso_pu_bacteria 8005645114 8005647544 595
107 iso_pu_bacteria 8046767195 8046771325 595
108 iso_pu_bacteria 8055617313 8055623774 595
109 3300031249 Ga0265339_10004173 Ga0265339_100041735 596
110 3300031595 Ga0265313_10001586 Ga0265313_1000158619 596
111 3300053177 Ga0500636_0000011 Ga0500636_0000011_47706_49496 596
112 iso_pu_bacteria 2558860100 2558865253 596
113 iso_pu_bacteria 2582581866 2585395353 596
114 iso_pu_bacteria 2667528174 2671113200 596
115 iso_pu_bacteria 2838029111 2838031720 596
116 iso_pu_bacteria 2842475841 2842478452 596
117 iso_pu_bacteria 2842502639 2842505602 596
118 iso_pu_bacteria 2852387548 2852394779 596
119 iso_pu_bacteria 2899803654 2899808407 596
120 iso_pu_bacteria 2913295892 2913301581 596
121 iso_pu_bacteria 2919408235 2919412968 596
122 iso_pu_bacteria 3003930520 3003934202 596
123 iso_pu_bacteria 643692032 643822260 596
124 iso_pu_bacteria 8024486573 8024487579 596
125 3300005985 Ga0081539_10000459 Ga0081539_1000045955 597
126 3300031251 Ga0265327_10012494 Ga0265327_100124944 597
127 3300049571 Ga0501034_0089261 Ga0501034_0089261_1197_3026 597
128 iso_pu_bacteria 2585427633 2585996271 597
129 iso_pu_bacteria 2585427634 2586000882 597
130 iso_pu_bacteria 2919171160 2919174641 597
131 3300003771 Ga0055526_1001610 Ga0055526_10016102 598
132 3300003781 Ga0055536_1001115 Ga0055536_100111515 598
133 3300003790 Ga0055528_1000096 Ga0055528_100009630 598
134 3300003794 Ga0055531_10005662 Ga0055531_100056626 598
135 3300009093 Ga0105240_10116223 Ga0105240_101162233 598
136 3300010375 Ga0105239_10048676 Ga0105239_100486762 598
137 3300025231 Ga0207427_101700 Ga0207427_1017001 598
138 3300025261 Ga0209233_1000541 Ga0209233_100054114 598
139 3300025273 Ga0209673_1000252 Ga0209673_100025261 598
140 3300025292 Ga0209676_1002049 Ga0209676_10020496 598
141 3300025294 Ga0209025_1002306 Ga0209025_100230612 598
142 3300025297 Ga0209758_1000688 Ga0209758_100068839 598
143 3300025298 Ga0209050_1005653 Ga0209050_10056535 598
144 3300025299 Ga0209256_1000786 Ga0209256_10007864 598
145 3300025303 Ga0209051_1002500 Ga0209051_10025005 598
146 3300025304 Ga0209257_1005745 Ga0209257_10057456 598
147 3300046660 Ga0495625_0030672 Ga0495625_0030672_67_1959 598
148 3300048915 Ga0496112_0082086 Ga0496112_0082086_740_2584 598
149 3300048919 Ga0496116_0013786 Ga0496116_0013786_2383_4203 598
150 3300048919 Ga0496116_0020125 Ga0496116_0020125_81_1877 598
151 3300048920 Ga0496117_0013898 Ga0496117_0013898_1157_2977 598
152 3300048921 Ga0496118_0022580 Ga0496118_0022580_1852_3672 598
153 3300048925 Ga0496122_0022093 Ga0496122_0022093_1544_3364 598
154 3300048926 Ga0496123_0023238 Ga0496123_0023238_1352_3172 598
155 3300048927 Ga0496124_0004324 Ga0496124_0004324_2351_4171 598
156 3300048929 Ga0496126_0042292 Ga0496126_0042292_397_2205 598
157 3300053153 Ga0500616_0000102 Ga0500616_0000102_108333_110162 598
158 3300002773 JGI25152J39213_1001418 JGI25152J39213_10014186 599
159 3300002774 JGI25150J39212_1000010 JGI25150J39212_1000010180 599
160 3300003187 JGI25151J46595_10000026 JGI25151J46595_10000026160 599
161 3300003215 JGI25153J46596_10005939 JGI25153J46596_100059394 599
162 3300003322 rootL2_10009173 rootL2_1000917316 599
163 3300006186 Ga0075369_10003191 Ga0075369_100031914 599
164 3300009763 Ga0123340_1041959 Ga0123340_10419591 599
165 3300009765 Ga0123341_1056017 Ga0123341_10560171 599
166 3300025245 Ga0207425_1000010 Ga0207425_1000010507 599
167 3300025258 Ga0209129_1000197 Ga0209129_100019776 599
168 3300025258 Ga0209129_1001986 Ga0209129_10019864 599
169 3300025273 Ga0209673_1006322 Ga0209673_10063225 599
170 3300025273 Ga0209673_1008864 Ga0209673_10088642 599
171 3300025292 Ga0209676_1000019 Ga0209676_1000019245 599
172 3300025294 Ga0209025_1000022 Ga0209025_100002276 599
173 3300025297 Ga0209758_1000086 Ga0209758_1000086183 599
174 3300025298 Ga0209050_1016337 Ga0209050_10163374 599
175 3300025302 Ga0207426_1002795 Ga0207426_10027956 599
176 3300026067 Ga0207678_10118783 Ga0207678_101187832 599
177 3300028794 Ga0307515_10000375 Ga0307515_1000037531 599
178 3300031456 Ga0307513_10000335 Ga0307513_1000033558 599
179 3300046460 Ga0495638_0000420 Ga0495638_0000420_33394_35193 599
180 3300046460 Ga0495638_0031561 Ga0495638_0031561_284_2092 599
181 3300046506 Ga0495583_0003372 Ga0495583_0003372_41_1867 599
182 3300046506 Ga0495583_0021146 Ga0495583_0021146_485_2284 599
183 3300046512 Ga0495610_0010647 Ga0495610_0010647_1927_3726 599
184 3300046515 Ga0495620_0039868 Ga0495620_0039868_232_2058 599
185 3300046519 Ga0495632_0004193 Ga0495632_0004193_2918_4747 599
186 3300046522 Ga0495643_0010332 Ga0495643_0010332_513_2312 599
187 3300046524 Ga0495648_0014179 Ga0495648_0014179_403_2202 599
188 3300046525 Ga0495663_0001716 Ga0495663_0001716_1566_3365 599
189 3300046660 Ga0495625_0009342 Ga0495625_0009342_4648_6447 599
190 3300046674 Ga0495588_0000378 Ga0495588_0000378_4068_5867 599
191 3300046691 Ga0495670_0014478 Ga0495670_0014478_459_2258 599
192 3300046692 Ga0495671_0000867 Ga0495671_0000867_16087_17886 599
193 3300046694 Ga0495649_0001953 Ga0495649_0001953_13133_14959 599
194 3300047443 Ga0495687_006530 Ga0495687_006530_4238_6037 599
195 3300047470 Ga0495681_0000678 Ga0495681_0000678_16121_17920 599
196 3300047472 Ga0495686_0000296 Ga0495686_0000296_34393_36222 599
197 3300048905 Ga0496102_0083303 Ga0496102_0083303_595_2424 599
198 3300048922 Ga0496119_0014776 Ga0496119_0014776_3543_5372 599
199 3300048923 Ga0496120_0022015 Ga0496120_0022015_1993_3822 599
200 3300048924 Ga0496121_0072426 Ga0496121_0072426_563_2392 599
201 3300048925 Ga0496122_0047377 Ga0496122_0047377_692_2509 599
202 3300048926 Ga0496123_0065421 Ga0496123_0065421_321_2138 599
203 3300048928 Ga0496125_0056456 Ga0496125_0056456_192_2021 599
204 3300049459 Ga0495678_001350 Ga0495678_001350_16092_17891 599
205 3300049460 Ga0495682_0005253 Ga0495682_0005253_2685_4484 599
206 3300050492 nmdc:mga0yw44_23732_c1 nmdc:mga0yw44_23732_c1_874_2703 599
207 3300050516 nmdc:mga0sz30_7667_c1 nmdc:mga0sz30_7667_c1_1348_3177 599
208 3300001979 JGI24740J21852_10000003 JGI24740J21852_1000000320 600
209 3300002737 JGI25162J39368_1000069 JGI25162J39368_1000069117 600
210 3300003214 JGI25165J46597_1000018 JGI25165J46597_100001832 600
211 3300005331 Ga0070670_100036429 Ga0070670_1000364293 600
212 3300006038 Ga0075365_10012909 Ga0075365_100129093 600
213 3300006178 Ga0075367_10006877 Ga0075367_100068774 600
214 3300021320 Ga0214544_1000906 Ga0214544_100090642 600
215 3300021321 Ga0214542_1000400 Ga0214542_100040038 600
216 3300021327 Ga0214543_1000019 Ga0214543_100001938 600
217 3300025233 Ga0209437_100022 Ga0209437_10002297 600
218 3300025261 Ga0209233_1000031 Ga0209233_100003197 600
219 3300025925 Ga0207650_10001958 Ga0207650_1000195813 600
220 3300046507 Ga0495606_0000848 Ga0495606_0000848_31812_33644 600
221 3300046522 Ga0495643_0007745 Ga0495643_0007745_2541_4346 600
222 3300046557 Ga0495622_0035846 Ga0495622_0035846_265_2100 600
223 3300048912 Ga0496109_0020241 Ga0496109_0020241_574_2427 600
224 3300048913 Ga0496110_0000214 Ga0496110_0000214_10882_12735 600
225 3300048913 Ga0496110_0011003 Ga0496110_0011003_5225_7063 600
226 3300048924 Ga0496121_0051672 Ga0496121_0051672_1303_3135 600
227 3300048925 Ga0496122_0027563 Ga0496122_0027563_2898_4700 600
228 3300048927 Ga0496124_0010829 Ga0496124_0010829_471_2273 600
229 3300048928 Ga0496125_0032561 Ga0496125_0032561_671_2473 600
230 3300050490 nmdc:mga03n38_1298_c1 nmdc:mga03n38_1298_c1_2266_4092 600
231 3300050494 nmdc:mga06z11_672_c1 nmdc:mga06z11_672_c1_9299_11125 600
232 3300050494 nmdc:mga06z11_8084_c1 nmdc:mga06z11_8084_c1_1836_3662 600
233 3300053177 Ga0500636_0000121 Ga0500636_0000121_9034_10869 600

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF21986

AH_C

Allophanate hydrolase C-terminal domain

438

559

0.98

PF01425

Amidase

Amidase

10

416

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
4cp8-assembly2.cif.gz_D structure of the amidase domain of allophanate hydrolase from pseudomonas sp strain adp 0.9728 6 443
4gyr-assembly1.cif.gz_B granulibacter bethesdensis allophanate hydrolase apo 0.9698 4 461
4gyr-assembly1.cif.gz_B granulibacter bethesdensis allophanate hydrolase apo 0.9574 4 461
4cp8-assembly2.cif.gz_D structure of the amidase domain of allophanate hydrolase from pseudomonas sp strain adp 0.9515 6 443
5c5z-assembly1.cif.gz_B crystal structure analysis of c4763, a uropathogenic e. coli-specific protein 0.9144 472 597
ID Description Score Start End Superfamily
4cp8A00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.9717 6 443 3.90.1300.10
4gyrA01 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.9653 4 461 3.90.1300.10
4gyrA01 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.9506 4 461 3.90.1300.10
4cp8A00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.9483 6 443 3.90.1300.10
4gyrA02 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1; 0.9336 294 365 1.20.58.1700
ID Description Score Start End GO Terms
AF-A0A3S1MNG5-F1-model_v4 Allophanate hydrolase 0.9855 227 440 GO:0016787
AF-A0A3S1MNG5-F1-model_v4 Allophanate hydrolase 0.9809 227 440 GO:0016787
AF-A0A4S1F2S6-F1-model_v4 Allophanate hydrolase 0.9786 326 456 GO:0016787
AF-A0A075T4Y4-F1-model_v4 Allophanate hydrolase 0.9769 127 423 GO:0016787
AF-A0A4S0RAC4-F1-model_v4 Allophanate hydrolase 0.9689 16 143 GO:0016787

Feature Viewer

pLDDT pTM Quality
89.85 0.77 High
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Predicted Structure (AlphaFold2)

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