F346410

General Info

Members Datasets Scaffolds Average Seq Length
233 184 466 169

Family's Representative Sequence

Representative Sequence 3300046500|Ga0495596_0125287|Ga0495596_0125287_112_672
Length 186
Sequence MPMPQRARVCEGVAVTEDWEERTAAAWATFDGSEEATEADAADFRAVIDALVAELPADSPVGPFERACAWDSTGHSDQAVPLYREALARGLGGYRGRRTKIQLSSSLRNIGQAEEGVKLLTPELDAPSDELDDAVRATLALCLSSLGRDREGLSLALGALAPHLPRYQRSMANYARLLVEPEPEPG

Samples

Sample ID Description Type Environment
1 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
12 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
13 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
14 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
15 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
16 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
17 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
18 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
19 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
20 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
21 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
22 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
23 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
24 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
28 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
30 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
31 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
32 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
33 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
34 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
35 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
36 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
37 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
38 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
39 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
40 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
41 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
42 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
43 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
44 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
45 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
46 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
47 3300042126 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218F_E14_070516_87 Metagenome Rhizosphere
48 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
49 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
50 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
51 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
52 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
53 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
54 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
55 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
56 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
57 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
58 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
59 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
60 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
61 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
62 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
63 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
64 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
65 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
66 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
67 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
68 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
69 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
70 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
71 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
72 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
73 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
74 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
75 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
76 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
77 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
78 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
79 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
80 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
81 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
82 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
83 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
84 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
85 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
86 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
87 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
88 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
89 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
90 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
91 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
92 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
93 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
94 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
95 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
96 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
97 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
98 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
99 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
100 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
101 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
102 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
103 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
104 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
105 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
106 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
107 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
108 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
109 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
110 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
111 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
112 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
113 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
114 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
115 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
116 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
117 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
118 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
119 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
120 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
121 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
122 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
123 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
124 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
125 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
126 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
127 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
128 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
129 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
130 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
146 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
147 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
148 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
149 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
150 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
151 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
152 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
153 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
154 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
155 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
156 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
157 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
158 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
161 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
162 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
163 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
164 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
165 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
166 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
167 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
168 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
169 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
170 2858868258 Micromonospora sp. MH33 Isolate Unclassified
171 2862574272 Streptomyces sp. AcE210 Isolate Nodule
172 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
173 2867428634 Streptomyces sp. RP5T Isolate Unclassified
174 2902582711 Micromonospora sp. AP08 Isolate Unclassified
175 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
176 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
177 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
178 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
179 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
180 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
181 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
182 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
183 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
184 8057568493 Actinorhabdospora filicis NBRC 111898 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.42
Metatranscriptomes 0
Isolates 8.58

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.72
Nodule 0.43
Rhizoplane 0.43
Rhizosphere 89.7
Stem 0
Stem Tuber 0
Unclassified 2.58

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495596_0125287 3300046500 Bacteria 997
2 rootH1_10016980 3300003316 Bacteria 16960
3 rootH2_10032754 3300003320 Bacteria 20789
4 rootL2_10023080 3300003322 Bacteria 2954
5 rootH1_10043522 3300003323 Bacteria 4588
6 JGI25407J50210_10008770 3300003373 Bacteria 2552
7 Ga0070658_10177914 3300005327 Bacteria 1789
8 Ga0070682_101178987 3300005337 Bacteria 645
9 Ga0070661_100665579 3300005344 Bacteria 846
10 Ga0070684_100063217 3300005535 Bacteria 3244
11 Ga0070665_100034435 3300005548 Bacteria 5093
12 Ga0070664_100252310 3300005564 Bacteria 1586
13 Ga0068860_100069407 3300005843 Bacteria 3350
14 Ga0081455_10210179 3300005937 Bacteria 1450
15 Ga0081538_10016712 3300005981 Bacteria 5611
16 Ga0081538_10278499 3300005981 Bacteria 622
17 Ga0081539_10074882 3300005985 Bacteria 1801
18 Ga0105245_10242826 3300009098 Bacteria 1746
19 Ga0105245_10443668 3300009098 Bacteria 1305
20 Ga0105237_10696817 3300009545 Bacteria 1022
21 Ga0105239_10330271 3300010375 Bacteria 1720
22 Ga0157378_10746395 3300013297 Bacteria 1001
23 Ga0209758_1012963 3300025297 Bacteria 4601
24 Ga0207426_1015466 3300025302 Bacteria 2764
25 Ga0209051_1052860 3300025303 Bacteria 1339
26 Ga0207687_10080425 3300025927 Bacteria 2352
27 Ga0207687_10105622 3300025927 Bacteria 2081
28 Ga0207679_10215643 3300025945 Bacteria 1612
29 Ga0207683_10780778 3300026121 Bacteria 886
30 Ga0209371_1016057 3300027312 Bacteria 1988
31 Ga0268266_10008526 3300028379 Bacteria 9107
32 Ga0268256_1019101 3300030500 Bacteria 1884
33 Ga0307512_10119468 3300030522 Bacteria 1700
34 Ga0307513_10151841 3300031456 Bacteria 2223
35 Ga0307412_11003310 3300031911 Bacteria 738
36 Ga0307415_100174683 3300032126 Bacteria 1679
37 Ga0395899_0317139 3300037312 Bacteria 1051
38 Ga0395900_0191871 3300037418 Bacteria 2072
39 Ga0395898_0038873 3300037466 Bacteria 4713
40 Ga0395905_0273849 3300037471 Bacteria 1574
41 Ga0395901_0189038 3300038443 Bacteria 2160
42 Ga0439439_0014197 3300041406 Bacteria 1938
43 Ga0451837_0374179 3300041494 Bacteria 3640
44 Ga0439433_0079568 3300041999 Bacteria 796
45 Ga0439442_013798 3300042002 Bacteria 1659
46 Ga0439442_016604 3300042002 Bacteria 1518
47 Ga0439442_022178 3300042002 Bacteria 1317
48 Ga0439449_0006165 3300042007 Bacteria 4582
49 Ga0439449_0016455 3300042007 Bacteria 2779
50 Ga0439450_071470 3300042008 Unclassified 852
51 Ga0439457_000327 3300042014 Bacteria 13092
52 Ga0439463_074848 3300042016 Bacteria 869
53 Ga0450888_008689 3300042126 Bacteria 1149
54 Ga0439460_0112699 3300042461 Bacteria 884
55 Ga0439440_0005752 3300042993 Unclassified 2470
56 Ga0466969_0001438 3300044656 Bacteria 12807
57 Ga0466965_0516740 3300044683 Bacteria 671
58 Ga0466966_0019375 3300044684 Bacteria 4476
59 Ga0466966_0100891 3300044684 Bacteria 1785
60 Ga0466961_0026422 3300044693 Bacteria 3732
61 Ga0466961_0183750 3300044693 Bacteria 1297
62 Ga0466963_0097971 3300044694 Bacteria 2004
63 Ga0466963_0220707 3300044694 Bacteria 1327
64 Ga0466963_0253480 3300044694 Bacteria 1235
65 Ga0466964_0088198 3300044706 Bacteria 1345
66 Ga0466971_0054103 3300044719 Bacteria 1809
67 Ga0466971_0101414 3300044719 Bacteria 1323
68 Ga0466970_0066664 3300044765 Bacteria 1933
69 Ga0466959_0025949 3300045049 Bacteria 4345
70 Ga0466959_0171946 3300045049 Bacteria 1519
71 Ga0466958_0146495 3300045836 Bacteria 1488
72 Ga0466967_0008671 3300045976 Bacteria 7479
73 Ga0495617_018239 3300046452 Bacteria 2373
74 Ga0495627_010129 3300046453 Bacteria 3441
75 Ga0495592_0012341 3300046454 Bacteria 6488
76 Ga0495603_0024849 3300046455 Bacteria 3625
77 Ga0495603_0129586 3300046455 Bacteria 1469
78 Ga0495603_0459067 3300046455 Bacteria 729
79 Ga0495590_0019114 3300046457 Bacteria 2445
80 Ga0495629_0011794 3300046459 Bacteria 6341
81 Ga0495629_0106443 3300046459 Bacteria 1956
82 Ga0495651_0295478 3300046462 Bacteria 1088
83 Ga0495580_0132208 3300046472 Bacteria 1731
84 Ga0495605_0011562 3300046474 Bacteria 4916
85 Ga0495605_0042845 3300046474 Bacteria 2246
86 Ga0495639_0031612 3300046475 Bacteria 2357
87 Ga0495662_0053694 3300046476 Bacteria 1946
88 Ga0495664_0100225 3300046477 Bacteria 1744
89 Ga0495585_0155603 3300046492 Bacteria 1189
90 Ga0495594_0036922 3300046499 Bacteria 2666
91 Ga0495594_0369431 3300046499 Bacteria 817
92 Ga0495607_0184826 3300046501 Bacteria 1042
93 Ga0495583_0003997 3300046506 Bacteria 10875
94 Ga0495583_0054394 3300046506 Bacteria 1812
95 Ga0495608_0038805 3300046511 Bacteria 3196
96 Ga0495610_0017845 3300046512 Bacteria 4031
97 Ga0495616_0006014 3300046513 Bacteria 7397
98 Ga0495616_0277440 3300046513 Bacteria 713
99 Ga0495618_0062999 3300046514 Bacteria 2353
100 Ga0495620_0002612 3300046515 Bacteria 10422
101 Ga0495620_0013845 3300046515 Bacteria 4118
102 Ga0495628_0046547 3300046516 Bacteria 3444
103 Ga0495631_0025086 3300046518 Bacteria 2748
104 Ga0495631_0245239 3300046518 Bacteria 764
105 Ga0495637_0111950 3300046520 Bacteria 1057
106 Ga0495643_0084880 3300046522 Bacteria 1643
107 Ga0495648_0083445 3300046524 Bacteria 1810
108 Ga0495648_0226047 3300046524 Bacteria 919
109 Ga0495652_0153295 3300046529 Bacteria 1797
110 Ga0495654_0074829 3300046530 Bacteria 1599
111 Ga0495640_0633463 3300046533 Bacteria 644
112 Ga0495586_0373000 3300046535 Bacteria 820
113 Ga0495609_0015136 3300046538 Bacteria 3614
114 Ga0495597_0019144 3300046542 Bacteria 3206
115 Ga0495597_0070018 3300046542 Bacteria 1512
116 Ga0495622_0095118 3300046557 Bacteria 1367
117 Ga0495622_0141482 3300046557 Bacteria 1092
118 Ga0495633_0275634 3300046558 Bacteria 765
119 Ga0495668_0024807 3300046616 Bacteria 3409
120 Ga0495634_0064774 3300046642 Bacteria 2422
121 Ga0495611_0012511 3300046648 Bacteria 3608
122 Ga0495611_0153619 3300046648 Bacteria 1075
123 Ga0495611_0316573 3300046648 Bacteria 718
124 Ga0495625_0013660 3300046660 Bacteria 6513
125 Ga0495625_0039996 3300046660 Bacteria 3422
126 Ga0495635_0014374 3300046663 Bacteria 5537
127 Ga0495659_0191530 3300046664 Bacteria 836
128 Ga0495661_0115637 3300046665 Bacteria 1489
129 Ga0495588_0032001 3300046674 Bacteria 2650
130 Ga0495657_0061017 3300046675 Bacteria 2495
131 Ga0495623_0029320 3300046679 Bacteria 3541
132 Ga0495646_0086885 3300046680 Bacteria 1813
133 Ga0495613_0091787 3300046689 Bacteria 2199
134 Ga0495624_0024288 3300046690 Bacteria 3989
135 Ga0495624_0389864 3300046690 Bacteria 836
136 Ga0495670_0023137 3300046691 Bacteria 3069
137 Ga0495671_0124146 3300046692 Bacteria 1259
138 Ga0495649_0045277 3300046694 Bacteria 2399
139 Ga0495589_0011265 3300046794 Bacteria 4642
140 Ga0495589_0032100 3300046794 Bacteria 2641
141 Ga0495589_0049588 3300046794 Bacteria 2077
142 Ga0495600_0354691 3300046809 Bacteria 918
143 Ga0495660_0045955 3300046810 Bacteria 2395
144 Ga0495581_0036512 3300047315 Bacteria 2843
145 Ga0495581_0424727 3300047315 Bacteria 775
146 Ga0495604_0198935 3300047317 Bacteria 1391
147 Ga0495636_0100103 3300047318 Bacteria 1266
148 Ga0495636_0127206 3300047318 Bacteria 1131
149 Ga0495636_0202585 3300047318 Bacteria 906
150 Ga0495676_0013214 3300047321 Bacteria 7426
151 Ga0495676_0035595 3300047321 Bacteria 4162
152 Ga0495676_0048258 3300047321 Bacteria 3434
153 Ga0495680_0021521 3300047322 Bacteria 5396
154 Ga0495683_0240684 3300047323 Bacteria 798
155 Ga0495687_017585 3300047443 Bacteria 3560
156 Ga0495687_017628 3300047443 Bacteria 3554
157 Ga0495675_0055355 3300047444 Bacteria 2516
158 Ga0495685_005714 3300047447 Bacteria 4065
159 Ga0495685_027128 3300047447 Bacteria 1970
160 Ga0495685_078879 3300047447 Bacteria 1097
161 Ga0495681_0030064 3300047470 Bacteria 2772
162 Ga0495686_0057594 3300047472 Bacteria 2425
163 Ga0495686_0195889 3300047472 Bacteria 1162
164 Ga0495593_0014977 3300047673 Bacteria 4402
165 Ga0495602_0262321 3300048088 Bacteria 1281
166 Ga0495614_0043440 3300048089 Bacteria 1927
167 Ga0495614_0096434 3300048089 Bacteria 1289
168 Ga0495626_0042776 3300048091 Bacteria 2127
169 Ga0495626_0126964 3300048091 Bacteria 1092
170 Ga0496101_1039559 3300048904 Bacteria 644
171 Ga0501031_0002997 3300049568 Bacteria 10801
172 Ga0501031_0516903 3300049568 Unclassified 770
173 Ga0501032_0044364 3300049569 Bacteria 3009
174 Ga0501033_0008791 3300049570 Bacteria 7806
175 Ga0501034_0018133 3300049571 Bacteria 7221
176 Ga0501036_0012048 3300049572 Bacteria 7164
177 Ga0501037_0043954 3300049573 Bacteria 3282
178 Ga0501038_0075463 3300049574 Bacteria 2849
179 Ga0501039_0142661 3300049575 Bacteria 1881
180 Ga0501040_0099816 3300049576 Bacteria 2023
181 Ga0501040_0945867 3300049576 Unclassified 624
182 Ga0501041_0009916 3300049577 Bacteria 5610
183 Ga0501042_0216766 3300049578 Bacteria 1380
184 Ga0501043_0002752 3300049579 Bacteria 14705
185 Ga0501046_0049359 3300049580 Bacteria 3328
186 Ga0501047_0018421 3300049581 Bacteria 6693
187 Ga0501048_0024098 3300049582 Bacteria 4444
188 Ga0501048_0054309 3300049582 Bacteria 2846
189 Ga0501067_0012077 3300049583 Bacteria 4787
190 Ga0501067_0226968 3300049583 Bacteria 1040
191 Ga0501068_0042580 3300049584 Bacteria 2730
192 Ga0501069_0015482 3300049585 Bacteria 4088
193 Ga0501070_0333522 3300049586 Bacteria 1232
194 Ga0501072_0013926 3300049588 Bacteria 6163
195 Ga0501073_0023012 3300049589 Bacteria 4480
196 Ga0501074_0290133 3300049590 Bacteria 1162
197 Ga0501075_0854163 3300049591 Unclassified 692
198 Ga0501076_0011810 3300049592 Bacteria 6522
199 Ga0501077_0009764 3300049593 Bacteria 5969
200 Ga0501079_0503086 3300049741 Bacteria 952
201 Ga0501079_0776610 3300049741 Unclassified 754
202 Ga0501080_0015738 3300049742 Bacteria 6976
203 Ga0501080_0250340 3300049742 Bacteria 1615
204 Ga0501083_0009892 3300049744 Bacteria 6732
205 Ga0501035_0010273 3300049822 Bacteria 8683
206 Ga0501044_0035960 3300049823 Bacteria 5183
207 Ga0501044_0186085 3300049823 Bacteria 2041
208 Ga0501044_0587764 3300049823 Bacteria 1007
209 Ga0501045_0271519 3300049824 Bacteria 1262
210 Ga0500600_0076716 3300053149 Bacteria 1818
211 Ga0501084_0066698 3300054114 Bacteria 3011
212 Ga0501082_0063848 3300060353 Bacteria 3170
213 Ga0530510_0201478 3300061734 Bacteria 1478
214 2676480975 2675903059 Bacteria 8644972
215 2753272386 2751185782 Bacteria 11227053
216 2808840696 2808606359 Bacteria 9866990
217 2812359484 2811994879 Bacteria 9313447
218 2852642905 2852635781 Bacteria 8251373
219 2858870178 2858868258 Bacteria 7683772
220 2862582797 2862574272 Bacteria 10567477
221 2867323439 2867319477 Bacteria 7069771
222 2867436014 2867428634 Bacteria 9590268
223 2902587295 2902582711 Bacteria 6187705
224 2919468247 2919468124 Bacteria 9133025
225 2946066435 2946064051 Bacteria 8957905
226 2947230943 2947224130 Bacteria 9938529
227 2995470073 2995463766 Bacteria 8577691
228 3006325159 3006321560 Bacteria 8247479
229 3006395336 3006393351 Bacteria 6615579
230 3006495642 3006493962 Bacteria 8825450
231 8023628588 8023623736 Bacteria 8593882
232 8055071000 8055066027 Bacteria 9479577
233 8057570881 8057568493 Bacteria 7221719
234 Ga0495596_0125287
235 rootH1_10016980
236 rootH2_10032754
237 rootL2_10023080
238 rootH1_10043522
239 JGI25407J50210_10008770
240 Ga0070658_10177914
241 Ga0070682_101178987
242 Ga0070661_100665579
243 Ga0070684_100063217
244 Ga0070665_100034435
245 Ga0070664_100252310
246 Ga0068860_100069407
247 Ga0081455_10210179
248 Ga0081538_10016712
249 Ga0081538_10278499
250 Ga0081539_10074882
251 Ga0105245_10242826
252 Ga0105245_10443668
253 Ga0105237_10696817
254 Ga0105239_10330271
255 Ga0157378_10746395
256 Ga0209758_1012963
257 Ga0207426_1015466
258 Ga0209051_1052860
259 Ga0207687_10080425
260 Ga0207687_10105622
261 Ga0207679_10215643
262 Ga0207683_10780778
263 Ga0209371_1016057
264 Ga0268266_10008526
265 Ga0268256_1019101
266 Ga0307512_10119468
267 Ga0307513_10151841
268 Ga0307412_11003310
269 Ga0307415_100174683
270 Ga0395899_0317139
271 Ga0395900_0191871
272 Ga0395898_0038873
273 Ga0395905_0273849
274 Ga0395901_0189038
275 Ga0439439_0014197
276 Ga0451837_0374179
277 Ga0439433_0079568
278 Ga0439442_013798
279 Ga0439442_016604
280 Ga0439442_022178
281 Ga0439449_0006165
282 Ga0439449_0016455
283 Ga0439450_071470
284 Ga0439457_000327
285 Ga0439463_074848
286 Ga0450888_008689
287 Ga0439460_0112699
288 Ga0439440_0005752
289 Ga0466969_0001438
290 Ga0466965_0516740
291 Ga0466966_0019375
292 Ga0466966_0100891
293 Ga0466961_0026422
294 Ga0466961_0183750
295 Ga0466963_0097971
296 Ga0466963_0220707
297 Ga0466963_0253480
298 Ga0466964_0088198
299 Ga0466971_0054103
300 Ga0466971_0101414
301 Ga0466970_0066664
302 Ga0466959_0025949
303 Ga0466959_0171946
304 Ga0466958_0146495
305 Ga0466967_0008671
306 Ga0495617_018239
307 Ga0495627_010129
308 Ga0495592_0012341
309 Ga0495603_0024849
310 Ga0495603_0129586
311 Ga0495603_0459067
312 Ga0495590_0019114
313 Ga0495629_0011794
314 Ga0495629_0106443
315 Ga0495651_0295478
316 Ga0495580_0132208
317 Ga0495605_0011562
318 Ga0495605_0042845
319 Ga0495639_0031612
320 Ga0495662_0053694
321 Ga0495664_0100225
322 Ga0495585_0155603
323 Ga0495594_0036922
324 Ga0495594_0369431
325 Ga0495607_0184826
326 Ga0495583_0003997
327 Ga0495583_0054394
328 Ga0495608_0038805
329 Ga0495610_0017845
330 Ga0495616_0006014
331 Ga0495616_0277440
332 Ga0495618_0062999
333 Ga0495620_0002612
334 Ga0495620_0013845
335 Ga0495628_0046547
336 Ga0495631_0025086
337 Ga0495631_0245239
338 Ga0495637_0111950
339 Ga0495643_0084880
340 Ga0495648_0083445
341 Ga0495648_0226047
342 Ga0495652_0153295
343 Ga0495654_0074829
344 Ga0495640_0633463
345 Ga0495586_0373000
346 Ga0495609_0015136
347 Ga0495597_0019144
348 Ga0495597_0070018
349 Ga0495622_0095118
350 Ga0495622_0141482
351 Ga0495633_0275634
352 Ga0495668_0024807
353 Ga0495634_0064774
354 Ga0495611_0012511
355 Ga0495611_0153619
356 Ga0495611_0316573
357 Ga0495625_0013660
358 Ga0495625_0039996
359 Ga0495635_0014374
360 Ga0495659_0191530
361 Ga0495661_0115637
362 Ga0495588_0032001
363 Ga0495657_0061017
364 Ga0495623_0029320
365 Ga0495646_0086885
366 Ga0495613_0091787
367 Ga0495624_0024288
368 Ga0495624_0389864
369 Ga0495670_0023137
370 Ga0495671_0124146
371 Ga0495649_0045277
372 Ga0495589_0011265
373 Ga0495589_0032100
374 Ga0495589_0049588
375 Ga0495600_0354691
376 Ga0495660_0045955
377 Ga0495581_0036512
378 Ga0495581_0424727
379 Ga0495604_0198935
380 Ga0495636_0100103
381 Ga0495636_0127206
382 Ga0495636_0202585
383 Ga0495676_0013214
384 Ga0495676_0035595
385 Ga0495676_0048258
386 Ga0495680_0021521
387 Ga0495683_0240684
388 Ga0495687_017585
389 Ga0495687_017628
390 Ga0495675_0055355
391 Ga0495685_005714
392 Ga0495685_027128
393 Ga0495685_078879
394 Ga0495681_0030064
395 Ga0495686_0057594
396 Ga0495686_0195889
397 Ga0495593_0014977
398 Ga0495602_0262321
399 Ga0495614_0043440
400 Ga0495614_0096434
401 Ga0495626_0042776
402 Ga0495626_0126964
403 Ga0496101_1039559
404 Ga0501031_0002997
405 Ga0501031_0516903
406 Ga0501032_0044364
407 Ga0501033_0008791
408 Ga0501034_0018133
409 Ga0501036_0012048
410 Ga0501037_0043954
411 Ga0501038_0075463
412 Ga0501039_0142661
413 Ga0501040_0099816
414 Ga0501040_0945867
415 Ga0501041_0009916
416 Ga0501042_0216766
417 Ga0501043_0002752
418 Ga0501046_0049359
419 Ga0501047_0018421
420 Ga0501048_0024098
421 Ga0501048_0054309
422 Ga0501067_0012077
423 Ga0501067_0226968
424 Ga0501068_0042580
425 Ga0501069_0015482
426 Ga0501070_0333522
427 Ga0501072_0013926
428 Ga0501073_0023012
429 Ga0501074_0290133
430 Ga0501075_0854163
431 Ga0501076_0011810
432 Ga0501077_0009764
433 Ga0501079_0503086
434 Ga0501079_0776610
435 Ga0501080_0015738
436 Ga0501080_0250340
437 Ga0501083_0009892
438 Ga0501035_0010273
439 Ga0501044_0035960
440 Ga0501044_0186085
441 Ga0501044_0587764
442 Ga0501045_0271519
443 Ga0500600_0076716
444 Ga0501084_0066698
445 Ga0501082_0063848
446 Ga0530510_0201478
447 2676480975
448 2753272386
449 2808840696
450 2812359484
451 2852642905
452 2858870178
453 2862582797
454 2867323439
455 2867436014
456 2902587295
457 2919468247
458 2946066435
459 2947230943
460 2995470073
461 3006325159
462 3006395336
463 3006495642
464 8023628588
465 8055071000
466 8057570881

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12688

TPR_5

Tetratrico peptide repeat

60

178

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
4btb-assembly1.cif.gz_A crystal structure of the peptide(pro)9 bound complex of n-terminal domain and peptide substrate binding domain of prolyl-4 hydroxylase (residues 1-238) type i from human 0.8954 34 100
6vl6-assembly1.cif.gz_B de novo designed tetrahedral nanoparticle t33_dn2 presenting bg505 sosip trimers 0.857 35 135
1na3-assembly2.cif.gz_B design of stable alpha-helical arrays from an idealized tpr motif 0.8375 34 121
1na3-assembly1.cif.gz_A design of stable alpha-helical arrays from an idealized tpr motif 0.8373 34 120
6vl6-assembly1.cif.gz_B de novo designed tetrahedral nanoparticle t33_dn2 presenting bg505 sosip trimers 0.8335 35 135
ID Description Score Start End Superfamily
af_Q5ZBW3_76_160_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8809 35 100 1.25.40.10
af_A0A1D6NUQ7_146_259_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8585 34 140 1.25.40.10
af_Q7XJT7_360_465_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8405 35 140 1.25.40.10
af_A0A0P0XEL4_1_87_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8379 29 118 1.25.40.10
af_B6UD08_384_490_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8368 37 145 1.25.40.10
ID Description Score Start End GO Terms
AF-A0A7H8TG65-F1-model_v4 Tetratricopeptide repeat protein 0.9923 2 154
AF-A0A345GI05-F1-model_v4 deleted 0.9882 2 158
AF-A0A1B1M8H8-F1-model_v4 Tetratrico peptide repeat group 5 domain-containing protein 0.9872 2 158
AF-A0A2U9P125-F1-model_v4 Tetratrico peptide repeat group 5 domain-containing protein 0.9864 2 156
AF-A0A2G6ZCW9-F1-model_v4 deleted 0.9837 1 155

Map