F346146

General Info

Members Datasets Scaffolds Average Seq Length
233 151 220 309

Family's Representative Sequence

Representative Sequence 3300021384|Ga0213876_10000396|Ga0213876_1000039615
Length 307
Sequence MPAAFALPIDESARLTRRVTAFSVATAALLTALKGGVWAASGSVSVLASFADSGLDLVAALGTFWAVRFAASPPDAQHQFGHGKAEAFASLMQAGLVFASAALIGQEAVRHLVEPHRLERPVLGVAVMAFSTVLTLALVTAQTWVLRKTRSIAVTGDRAHYLADLASNLIALAAIGFDAFGGLAVAAILLWGAIDVFRRASGELLDEELPREARARIVALMTADPRLTGVHQLRTRASGPIIHIQMHADLDPELSLETAHEVVVAAEKRVLGAFPAADILIHADPRGRAEPHGGAFAESYDAREPAR

Samples

Sample ID Description Type Environment
1 2510917020 Caulobacter sp. AP07 Isolate Rhizosphere
2 2582581280 Caulobacter henricii CF287 Isolate Rhizosphere
3 2582581293 Caulobacter henricii YR570 Isolate Rhizosphere
4 2643221545 Caulobacter sp. Root1455 Isolate Unclassified
5 2643221552 Caulobacter sp. Root1472 Isolate Unclassified
6 2643221583 Caulobacter sp. Root655 Isolate Unclassified
7 2643221584 Caulobacter sp. Root656 Isolate Unclassified
8 2643221614 Phenylobacterium sp. Root77 Isolate Unclassified
9 2643221661 Phenylobacterium sp. Root1277 Isolate Unclassified
10 2643221666 Phenylobacterium sp. Root1290 Isolate Unclassified
11 2643221691 Caulobacter sp. Root487D2Y Isolate Unclassified
12 2818991435 Caulobacter henricii 536 Isolate Unclassified
13 2818991454 Caulobacter rhizosphaerae 3260 Isolate Rhizosphere
14 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
15 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
16 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
17 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
18 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
19 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
20 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
21 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
22 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
23 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
24 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
25 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
26 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
27 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
28 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
29 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
30 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
31 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
32 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
39 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
40 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
41 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
42 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
43 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
44 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
45 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
46 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
52 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
53 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
56 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
57 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
58 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
59 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
60 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027378 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
88 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
89 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
90 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
91 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
92 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
93 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
94 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
95 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
96 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
97 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
98 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
99 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
100 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
101 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
102 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
103 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
104 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
105 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
106 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
107 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
108 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
109 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
110 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
111 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
112 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
113 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
114 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
115 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
116 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
117 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
118 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
119 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
120 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
121 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
122 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
123 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
124 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
125 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
126 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
127 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
128 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
129 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
130 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
131 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
132 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
133 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
137 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
138 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
139 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
140 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
141 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
142 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
143 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
144 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
145 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
146 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
147 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
148 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
149 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
150 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
151 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.42
Metatranscriptomes 0
Isolates 5.58

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.88
Nodule 0
Rhizoplane 2.58
Rhizosphere 69.53
Stem 0
Stem Tuber 0
Unclassified 12.02

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25153J46596_10034633 3300003215 Bacteria 1647
2 JGI25153J46596_10042275 3300003215 Bacteria 1392
3 rootL2_10019779 3300003322 Bacteria 2783
4 Ga0055526_1021883 3300003771 Bacteria 2201
5 Ga0055530_10000788 3300003791 Bacteria 26395
6 Ga0055531_10000394 3300003794 Bacteria 42097
7 Ga0055531_10001105 3300003794 Bacteria 21012
8 Ga0055543_1020017 3300004625 Bacteria 1234
9 Ga0065165_1000293 3300005262 Bacteria 84715
10 Ga0065165_1000688 3300005262 Bacteria 48324
11 Ga0070658_10032526 3300005327 Bacteria 4193
12 Ga0070658_10036237 3300005327 Bacteria 3976
13 Ga0070658_10097511 3300005327 Bacteria 2427
14 Ga0068869_100041866 3300005334 Bacteria 3281
15 Ga0070680_100027645 3300005336 Bacteria 4543
16 Ga0070660_100091380 3300005339 Bacteria 2401
17 Ga0070660_100112483 3300005339 Bacteria 2167
18 Ga0070691_10031221 3300005341 Bacteria 2497
19 Ga0070669_100034236 3300005353 Bacteria 3678
20 Ga0070671_100000476 3300005355 Bacteria 27913
21 Ga0070659_100002748 3300005366 Bacteria 12524
22 Ga0070659_100007747 3300005366 Bacteria 7810
23 Ga0070667_100014757 3300005367 Bacteria 6455
24 Ga0070681_10014375 3300005458 Bacteria 7877
25 Ga0070681_10040674 3300005458 Bacteria 4657
26 Ga0070681_10050410 3300005458 Bacteria 4153
27 Ga0070679_100080850 3300005530 Bacteria 3239
28 Ga0070679_100107299 3300005530 Bacteria 2778
29 Ga0070679_100147049 3300005530 Bacteria 2334
30 Ga0068853_100033392 3300005539 Bacteria 4366
31 Ga0068853_100193648 3300005539 Bacteria 1848
32 Ga0070665_100000418 3300005548 Bacteria 62048
33 Ga0070665_100047790 3300005548 Bacteria 4295
34 Ga0070665_100289919 3300005548 Bacteria 1639
35 Ga0068855_100074583 3300005563 Bacteria 3940
36 Ga0068855_100090064 3300005563 Bacteria 3541
37 Ga0068855_100260798 3300005563 Bacteria 1930
38 Ga0068856_100389582 3300005614 Bacteria 1413
39 Ga0068859_100000681 3300005617 Bacteria 34110
40 Ga0068864_100000241 3300005618 Bacteria 48827
41 Ga0068863_100000097 3300005841 Bacteria 95374
42 Ga0068863_100068759 3300005841 Bacteria 3350
43 Ga0068858_100064607 3300005842 Bacteria 3387
44 Ga0068858_100071479 3300005842 Bacteria 3219
45 Ga0068862_100445134 3300005844 Bacteria 1220
46 Ga0075368_10018790 3300006042 Bacteria 2602
47 Ga0075364_10002083 3300006051 Bacteria 11170
48 Ga0075367_10006800 3300006178 Bacteria 5810
49 Ga0075366_10106499 3300006195 Bacteria 1685
50 Ga0075370_10101246 3300006353 Bacteria 1667
51 Ga0068865_100001208 3300006881 Bacteria 15030
52 Ga0097620_100000681 3300006931 Bacteria 34110
53 Ga0105240_10003837 3300009093 Bacteria 23242
54 Ga0105240_10007197 3300009093 Bacteria 16205
55 Ga0105240_10020764 3300009093 Bacteria 8749
56 Ga0105240_10132253 3300009093 Bacteria 2991
57 Ga0105240_10205135 3300009093 Bacteria 2308
58 Ga0105248_10000203 3300009177 Bacteria 68397
59 Ga0105248_10002170 3300009177 Bacteria 21730
60 Ga0105248_10003353 3300009177 Bacteria 17799
61 Ga0105248_10148442 3300009177 Bacteria 2645
62 Ga0105238_10008020 3300009551 Bacteria 10563
63 Ga0105238_10041301 3300009551 Bacteria 4672
64 Ga0105238_10053587 3300009551 Bacteria 4053
65 Ga0105238_10087019 3300009551 Bacteria 3112
66 Ga0105238_10426769 3300009551 Bacteria 1321
67 Ga0105239_10096316 3300010375 Bacteria 3270
68 Ga0157373_10000445 3300013100 Bacteria 32823
69 Ga0157370_10126769 3300013104 Bacteria 2382
70 Ga0163163_10007905 3300014325 Bacteria 9402
71 Ga0157379_10003769 3300014968 Bacteria 12906
72 Ga0213876_10000396 3300021384 Bacteria 36624
73 Ga0213876_10086579 3300021384 Bacteria 1658
74 Ga0209026_1000567 3300025250 Bacteria 24901
75 Ga0209564_1009936 3300025295 Bacteria 4451
76 Ga0209758_1002591 3300025297 Bacteria 18134
77 Ga0209758_1003056 3300025297 Bacteria 15909
78 Ga0209050_1000867 3300025298 Bacteria 40877
79 Ga0209257_1000227 3300025304 Bacteria 133512
80 Ga0209257_1000247 3300025304 Bacteria 125419
81 Ga0209257_1002614 3300025304 Bacteria 17418
82 Ga0207705_10035293 3300025909 Bacteria 3577
83 Ga0207707_10054917 3300025912 Bacteria 3466
84 Ga0207707_10147990 3300025912 Bacteria 2053
85 Ga0207695_10003289 3300025913 Bacteria 22966
86 Ga0207695_10006884 3300025913 Bacteria 14629
87 Ga0207695_10007374 3300025913 Bacteria 14033
88 Ga0207695_10008093 3300025913 Bacteria 13224
89 Ga0207695_10016521 3300025913 Bacteria 8629
90 Ga0207660_10061417 3300025917 Bacteria 2704
91 Ga0207660_10076716 3300025917 Bacteria 2444
92 Ga0207657_10006682 3300025919 Bacteria 11925
93 Ga0207657_10016726 3300025919 Bacteria 7063
94 Ga0207657_10020731 3300025919 Bacteria 6204
95 Ga0207652_10078526 3300025921 Bacteria 2882
96 Ga0207652_10087482 3300025921 Bacteria 2732
97 Ga0207681_10009307 3300025923 Bacteria 6000
98 Ga0207694_10025788 3300025924 Bacteria 4469
99 Ga0207694_10054445 3300025924 Bacteria 3104
100 Ga0207694_10058861 3300025924 Bacteria 2988
101 Ga0207644_10000272 3300025931 Bacteria 34285
102 Ga0207690_10000496 3300025932 Bacteria 25421
103 Ga0207690_10004979 3300025932 Bacteria 7844
104 Ga0207690_10012527 3300025932 Bacteria 5074
105 Ga0207704_10001557 3300025938 Bacteria 10288
106 Ga0207711_10001006 3300025941 Bacteria 27043
107 Ga0207711_10003354 3300025941 Bacteria 13873
108 Ga0207711_10009460 3300025941 Bacteria 8130
109 Ga0207711_10020626 3300025941 Bacteria 5499
110 Ga0207711_10135153 3300025941 Bacteria 2214
111 Ga0207689_10035138 3300025942 Bacteria 4163
112 Ga0207679_10021966 3300025945 Bacteria 4338
113 Ga0207667_10009782 3300025949 Bacteria 11276
114 Ga0207658_10015009 3300025986 Bacteria 5311
115 Ga0207703_10002065 3300026035 Bacteria 17677
116 Ga0207639_10066922 3300026041 Bacteria 2794
117 Ga0207639_10241466 3300026041 Bacteria 1571
118 Ga0207702_10141985 3300026078 Bacteria 2174
119 Ga0207702_10201328 3300026078 Bacteria 1846
120 Ga0207641_10000128 3300026088 Bacteria 111308
121 Ga0207676_10000235 3300026095 Bacteria 48499
122 Ga0207676_10291135 3300026095 Bacteria 1487
123 Ga0207675_100386786 3300026118 Bacteria 1376
124 Ga0209981_1000621 3300027378 Bacteria 4475
125 Ga0268266_10000003 3300028379 Bacteria 1701703
126 Ga0268266_10196079 3300028379 Bacteria 1846
127 Ga0268264_10035981 3300028381 Bacteria 4076
128 Ga0265334_10065868 3300028573 Bacteria 1357
129 Ga0307517_10006346 3300028786 Bacteria 17546
130 Ga0307517_10142298 3300028786 Bacteria 1678
131 Ga0265338_10024894 3300028800 Bacteria 6097
132 Ga0265338_10031259 3300028800 Bacteria 5222
133 Ga0265338_10046001 3300028800 Bacteria 4005
134 Ga0265324_10040021 3300029957 Bacteria 1625
135 Ga0265327_10000481 3300031251 Bacteria 70259
136 Ga0265327_10004292 3300031251 Bacteria 12732
137 Ga0265327_10027562 3300031251 Bacteria 3267
138 Ga0307513_10000100 3300031456 Bacteria 125183
139 Ga0307513_10010426 3300031456 Bacteria 11648
140 Ga0307513_10026452 3300031456 Bacteria 6688
141 Ga0307408_100268367 3300031548 Bacteria 1416
142 Ga0265314_10038797 3300031711 Bacteria 3438
143 Ga0307516_10000113 3300031730 Bacteria 93946
144 Ga0307510_10003321 3300033180 Bacteria 18743
145 Ga0373935_0048936 3300035692 Bacteria 2678
146 Ga0373927_0000173 3300035695 Bacteria 50996
147 Ga0373947_0067676 3300035725 Bacteria 2183
148 Ga0373925_0000049 3300037068 Bacteria 128065
149 Ga0395899_0000115 3300037312 Bacteria 133287
150 Ga0395900_0000002 3300037418 Bacteria 671103
151 Ga0395900_0063421 3300037418 Bacteria 3798
152 Ga0395900_0154622 3300037418 Bacteria 2343
153 Ga0395898_0008120 3300037466 Bacteria 11111
154 Ga0395898_0062304 3300037466 Bacteria 3622
155 Ga0395905_0021615 3300037471 Bacteria 6085
156 Ga0395905_0090018 3300037471 Bacteria 2876
157 Ga0436364_0428227 3300037853 Bacteria 1228
158 Ga0395901_0000021 3300038443 Bacteria 307734
159 Ga0395901_0417013 3300038443 Bacteria 1377
160 Ga0436365_0151080 3300039437 Bacteria 17124
161 Ga0436365_0304364 3300039437 Bacteria 2496
162 Ga0436363_1247981 3300039450 Bacteria 3155
163 Ga0451853_0721961 3300041512 Bacteria 2495
164 Ga0439446_0010799 3300042156 Bacteria 2466
165 Ga0495627_001101 3300046453 Bacteria 17629
166 Ga0495638_0000293 3300046460 Bacteria 65718
167 Ga0495638_0000996 3300046460 Bacteria 28464
168 Ga0495638_0001207 3300046460 Bacteria 24665
169 Ga0495638_0063772 3300046460 Bacteria 2271
170 Ga0495650_0000168 3300046471 Bacteria 145714
171 Ga0495583_0000003 3300046506 Bacteria 709273
172 Ga0495583_0017574 3300046506 Bacteria 3792
173 Ga0495616_0063204 3300046513 Bacteria 1810
174 Ga0495632_0027560 3300046519 Bacteria 2975
175 Ga0495637_0037856 3300046520 Bacteria 2091
176 Ga0495654_0000016 3300046530 Bacteria 306416
177 Ga0495668_0103424 3300046616 Bacteria 1558
178 Ga0495625_0017852 3300046660 Bacteria 5545
179 Ga0495625_0021651 3300046660 Bacteria 4945
180 Ga0495625_0164490 3300046660 Bacteria 1484
181 Ga0495625_0211889 3300046660 Bacteria 1273
182 Ga0495669_0000230 3300046684 Bacteria 33077
183 Ga0495589_0001064 3300046794 Bacteria 16474
184 Ga0495660_0009540 3300046810 Bacteria 5657
185 Ga0495677_0034458 3300047445 Bacteria 1847
186 Ga0495673_0000053 3300047469 Bacteria 254433
187 Ga0495673_0008002 3300047469 Bacteria 5992
188 Ga0495686_0019431 3300047472 Bacteria 4538
189 Ga0495686_0194571 3300047472 Bacteria 1167
190 Ga0496102_0018873 3300048905 Bacteria 6067
191 Ga0496112_0150747 3300048915 Bacteria 2292
192 Ga0496112_0261386 3300048915 Bacteria 1680
193 Ga0496115_0001261 3300048918 Bacteria 18161
194 Ga0496115_0009461 3300048918 Bacteria 7239
195 Ga0496115_0240987 3300048918 Bacteria 1490
196 Ga0496117_0007498 3300048920 Bacteria 10639
197 Ga0496119_0024159 3300048922 Bacteria 4284
198 Ga0496121_0000042 3300048924 Bacteria 342304
199 Ga0501033_0017057 3300049570 Bacteria 5489
200 Ga0501047_0002950 3300049581 Bacteria 16124
201 Ga0501047_0072291 3300049581 Bacteria 3320
202 Ga0501035_0125845 3300049822 Bacteria 2237
203 Ga0501044_0024105 3300049823 Bacteria 6464
204 Ga0501044_0197126 3300049823 Bacteria 1973
205 nmdc:mga03683_75452_c1 3300050489 Bacteria 1448
206 nmdc:mga00v17_7468_c1 3300050491 Bacteria 5835
207 nmdc:mga0k408_201230_c1 3300050493 Bacteria 1189
208 nmdc:mga06z11_4712_c1 3300050494 Bacteria 5390
209 nmdc:mga07m45_93210_c1 3300050496 Bacteria 1727
210 Ga0500555_001950 3300053103 Bacteria 6113
211 Ga0500556_0000401 3300053104 Bacteria 31673
212 Ga0500556_0027364 3300053104 Bacteria 1903
213 Ga0500562_001255 3300053108 Bacteria 6262
214 Ga0500608_080364 3300053122 Bacteria 1539
215 Ga0500618_000117 3300053125 Bacteria 64829
216 Ga0500577_0015547 3300053142 Bacteria 2379
217 Ga0500616_0092913 3300053153 Bacteria 1490
218 Ga0500627_0008215 3300053158 Bacteria 3691
219 Ga0500636_0077890 3300053177 Bacteria 1914
220 Ga0500645_003961 3300053730 Bacteria 5830

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300028573 Ga0265334_10065868 Ga0265334_100658681 272
2 3300028800 Ga0265338_10024894 Ga0265338_100248946 272
3 3300031251 Ga0265327_10027562 Ga0265327_100275623 272
4 3300031711 Ga0265314_10038797 Ga0265314_100387973 272
5 3300053122 Ga0500608_080364 Ga0500608_080364_210_1163 274
6 3300021384 Ga0213876_10086579 Ga0213876_100865792 281
7 3300039437 Ga0436365_0304364 Ga0436365_0304364_1172_2170 281
8 3300005353 Ga0070669_100034236 Ga0070669_1000342362 282
9 3300005355 Ga0070671_100000476 Ga0070671_1000004763 282
10 3300005367 Ga0070667_100014757 Ga0070667_1000147576 282
11 3300005548 Ga0070665_100289919 Ga0070665_1002899191 282
12 3300005617 Ga0068859_100000681 Ga0068859_10000068129 282
13 3300005841 Ga0068863_100068759 Ga0068863_1000687592 282
14 3300005842 Ga0068858_100064607 Ga0068858_1000646074 282
15 3300006931 Ga0097620_100000681 Ga0097620_1000006819 282
16 3300009177 Ga0105248_10002170 Ga0105248_100021706 282
17 3300014325 Ga0163163_10007905 Ga0163163_100079058 282
18 3300014968 Ga0157379_10003769 Ga0157379_100037692 282
19 3300025923 Ga0207681_10009307 Ga0207681_100093073 282
20 3300025931 Ga0207644_10000272 Ga0207644_100002724 282
21 3300025941 Ga0207711_10009460 Ga0207711_100094602 282
22 3300025986 Ga0207658_10015009 Ga0207658_100150092 282
23 3300026035 Ga0207703_10002065 Ga0207703_100020654 282
24 3300026118 Ga0207675_100386786 Ga0207675_1003867862 282
25 3300028379 Ga0268266_10196079 Ga0268266_101960791 282
26 3300028381 Ga0268264_10035981 Ga0268264_100359813 282
27 3300005366 Ga0070659_100002748 Ga0070659_1000027488 283
28 3300025919 Ga0207657_10020731 Ga0207657_100207314 283
29 3300025932 Ga0207690_10000496 Ga0207690_1000049625 283
30 3300033180 Ga0307510_10003321 Ga0307510_1000332111 284
31 3300028800 Ga0265338_10046001 Ga0265338_100460014 285
32 3300031730 Ga0307516_10000113 Ga0307516_1000011312 286
33 3300037471 Ga0395905_0090018 Ga0395905_0090018_502_1440 286
34 3300037853 Ga0436364_0428227 Ga0436364_0428227_120_1118 286
35 3300006051 Ga0075364_10002083 Ga0075364_1000208310 288
36 3300006178 Ga0075367_10006800 Ga0075367_100068004 288
37 3300006353 Ga0075370_10101246 Ga0075370_101012462 288
38 3300005548 Ga0070665_100047790 Ga0070665_1000477905 289
39 3300025304 Ga0209257_1002614 Ga0209257_10026149 289
40 3300035692 Ga0373935_0048936 Ga0373935_0048936_187_1125 289
41 3300035725 Ga0373947_0067676 Ga0373947_0067676_1182_2120 289
42 3300031456 Ga0307513_10010426 Ga0307513_100104265 290
43 3300048918 Ga0496115_0001261 Ga0496115_0001261_10452_11393 290
44 3300049822 Ga0501035_0125845 Ga0501035_0125845_13_885 290
45 3300050489 nmdc:mga03683_75452_c1 nmdc:mga03683_75452_c1_10_894 290
46 3300005339 Ga0070660_100112483 Ga0070660_1001124832 291
47 3300013104 Ga0157370_10126769 Ga0157370_101267693 291
48 3300005539 Ga0068853_100193648 Ga0068853_1001936481 292
49 3300006042 Ga0075368_10018790 Ga0075368_100187903 292
50 3300006195 Ga0075366_10106499 Ga0075366_101064992 292
51 3300050491 nmdc:mga00v17_7468_c1 nmdc:mga00v17_7468_c1_3325_4278 292
52 3300050493 nmdc:mga0k408_201230_c1 nmdc:mga0k408_201230_c1_172_1125 292
53 3300050494 nmdc:mga06z11_4712_c1 nmdc:mga06z11_4712_c1_1820_2773 292
54 3300050496 nmdc:mga07m45_93210_c1 nmdc:mga07m45_93210_c1_647_1600 292
55 3300037418 Ga0395900_0063421 Ga0395900_0063421_393_1346 293
56 3300037466 Ga0395898_0062304 Ga0395898_0062304_763_1716 293
57 3300038443 Ga0395901_0417013 Ga0395901_0417013_409_1362 293
58 3300047472 Ga0495686_0194571 Ga0495686_0194571_20_952 293
59 3300049581 Ga0501047_0002950 Ga0501047_0002950_3640_4575 293
60 3300046684 Ga0495669_0000230 Ga0495669_0000230_7870_8814 296
61 3300047445 Ga0495677_0034458 Ga0495677_0034458_320_1264 296
62 3300005614 Ga0068856_100389582 Ga0068856_1003895821 299
63 3300026078 Ga0207702_10201328 Ga0207702_102013281 299
64 3300021384 Ga0213876_10000396 Ga0213876_1000039615 300
65 3300039437 Ga0436365_0151080 Ga0436365_0151080_7976_8926 300
66 3300039450 Ga0436363_1247981 Ga0436363_1247981_378_1328 300
67 3300046453 Ga0495627_001101 Ga0495627_001101_12485_13423 301
68 3300053177 Ga0500636_0077890 Ga0500636_0077890_355_1335 303
69 3300005563 Ga0068855_100074583 Ga0068855_1000745832 304
70 iso_pu_bacteria 2582581280 2585151087 304
71 iso_pu_bacteria 2582581293 2585196253 304
72 3300005262 Ga0065165_1000688 Ga0065165_100068819 305
73 3300005334 Ga0068869_100041866 Ga0068869_1000418662 305
74 3300005618 Ga0068864_100000241 Ga0068864_10000024131 305
75 3300005841 Ga0068863_100000097 Ga0068863_10000009769 305
76 3300010375 Ga0105239_10096316 Ga0105239_100963163 305
77 3300025919 Ga0207657_10016726 Ga0207657_100167261 305
78 3300026088 Ga0207641_10000128 Ga0207641_1000012868 305
79 3300026095 Ga0207676_10000235 Ga0207676_1000023519 305
80 3300003215 JGI25153J46596_10042275 JGI25153J46596_100422751 306
81 3300003791 Ga0055530_10000788 Ga0055530_1000078810 306
82 3300003794 Ga0055531_10001105 Ga0055531_1000110512 306
83 3300005327 Ga0070658_10036237 Ga0070658_100362375 306
84 3300005458 Ga0070681_10050410 Ga0070681_100504105 306
85 3300005530 Ga0070679_100147049 Ga0070679_1001470492 306
86 3300009093 Ga0105240_10205135 Ga0105240_102051353 306
87 3300025250 Ga0209026_1000567 Ga0209026_10005677 306
88 3300025297 Ga0209758_1003056 Ga0209758_100305616 306
89 3300025298 Ga0209050_1000867 Ga0209050_100086732 306
90 3300025304 Ga0209257_1000227 Ga0209257_1000227131 306
91 3300025912 Ga0207707_10054917 Ga0207707_100549173 306
92 3300025913 Ga0207695_10008093 Ga0207695_100080932 306
93 3300025917 Ga0207660_10076716 Ga0207660_100767162 306
94 iso_pu_bacteria 2510917020 2511123297 306
95 iso_pu_bacteria 2643221552 2643779995 306
96 iso_pu_bacteria 2643221584 2643932045 306
97 3300005563 Ga0068855_100260798 Ga0068855_1002607982 307
98 3300005844 Ga0068862_100445134 Ga0068862_1004451341 307
99 3300006881 Ga0068865_100001208 Ga0068865_10000120812 307
100 3300009093 Ga0105240_10020764 Ga0105240_100207643 307
101 3300009177 Ga0105248_10000203 Ga0105248_1000020324 307
102 3300009177 Ga0105248_10148442 Ga0105248_101484423 307
103 3300009551 Ga0105238_10008020 Ga0105238_100080205 307
104 3300009551 Ga0105238_10041301 Ga0105238_100413013 307
105 3300025913 Ga0207695_10016521 Ga0207695_100165217 307
106 3300025924 Ga0207694_10025788 Ga0207694_100257885 307
107 3300025924 Ga0207694_10058861 Ga0207694_100588613 307
108 3300025938 Ga0207704_10001557 Ga0207704_1000155712 307
109 3300025941 Ga0207711_10001006 Ga0207711_1000100623 307
110 3300025941 Ga0207711_10020626 Ga0207711_100206265 307
111 3300026095 Ga0207676_10291135 Ga0207676_102911351 307
112 3300028786 Ga0307517_10006346 Ga0307517_100063467 307
113 3300031456 Ga0307513_10026452 Ga0307513_100264526 307
114 3300031548 Ga0307408_100268367 Ga0307408_1002683672 307
115 3300046506 Ga0495583_0017574 Ga0495583_0017574_1235_2176 307
116 3300046660 Ga0495625_0164490 Ga0495625_0164490_118_1074 307
117 3300048915 Ga0496112_0261386 Ga0496112_0261386_21_962 307
118 3300048918 Ga0496115_0240987 Ga0496115_0240987_518_1459 307
119 iso_pu_bacteria 2643221614 2644087391 307
120 iso_pu_bacteria 2643221661 2644344565 307
121 iso_pu_bacteria 2643221666 2644366751 307
122 3300005842 Ga0068858_100071479 Ga0068858_1000714793 308
123 3300009093 Ga0105240_10003837 Ga0105240_1000383714 308
124 3300009551 Ga0105238_10087019 Ga0105238_100870193 308
125 3300025913 Ga0207695_10006884 Ga0207695_1000688412 308
126 3300025924 Ga0207694_10054445 Ga0207694_100544452 308
127 3300046810 Ga0495660_0009540 Ga0495660_0009540_4357_5292 308
128 3300049570 Ga0501033_0017057 Ga0501033_0017057_644_1576 308
129 3300049823 Ga0501044_0024105 Ga0501044_0024105_1082_2014 308
130 iso_pu_bacteria 2643221545 2643750197 308
131 iso_pu_bacteria 2643221691 2644507086 308
132 iso_pu_bacteria 2818991435 2819538179 308
133 iso_pu_bacteria 2818991454 2819647251 308
134 3300005327 Ga0070658_10032526 Ga0070658_100325263 309
135 3300005327 Ga0070658_10097511 Ga0070658_100975112 309
136 3300005336 Ga0070680_100027645 Ga0070680_1000276453 309
137 3300005339 Ga0070660_100091380 Ga0070660_1000913803 309
138 3300005341 Ga0070691_10031221 Ga0070691_100312211 309
139 3300005366 Ga0070659_100007747 Ga0070659_1000077473 309
140 3300005458 Ga0070681_10014375 Ga0070681_100143753 309
141 3300005458 Ga0070681_10040674 Ga0070681_100406743 309
142 3300005530 Ga0070679_100080850 Ga0070679_1000808503 309
143 3300005530 Ga0070679_100107299 Ga0070679_1001072992 309
144 3300005539 Ga0068853_100033392 Ga0068853_1000333922 309
145 3300005548 Ga0070665_100000418 Ga0070665_1000004184 309
146 3300005563 Ga0068855_100090064 Ga0068855_1000900643 309
147 3300009093 Ga0105240_10007197 Ga0105240_1000719710 309
148 3300009093 Ga0105240_10132253 Ga0105240_101322533 309
149 3300009177 Ga0105248_10003353 Ga0105248_100033539 309
150 3300009551 Ga0105238_10053587 Ga0105238_100535872 309
151 3300009551 Ga0105238_10426769 Ga0105238_104267692 309
152 3300025909 Ga0207705_10035293 Ga0207705_100352933 309
153 3300025912 Ga0207707_10147990 Ga0207707_101479902 309
154 3300025913 Ga0207695_10003289 Ga0207695_100032895 309
155 3300025913 Ga0207695_10007374 Ga0207695_1000737413 309
156 3300025917 Ga0207660_10061417 Ga0207660_100614172 309
157 3300025919 Ga0207657_10006682 Ga0207657_100066829 309
158 3300025921 Ga0207652_10078526 Ga0207652_100785263 309
159 3300025921 Ga0207652_10087482 Ga0207652_100874823 309
160 3300025932 Ga0207690_10004979 Ga0207690_100049795 309
161 3300025941 Ga0207711_10003354 Ga0207711_1000335411 309
162 3300025942 Ga0207689_10035138 Ga0207689_100351383 309
163 3300025949 Ga0207667_10009782 Ga0207667_100097827 309
164 3300026041 Ga0207639_10066922 Ga0207639_100669223 309
165 3300027378 Ga0209981_1000621 Ga0209981_10006212 309
166 3300028379 Ga0268266_10000003 Ga0268266_100000031181 309
167 3300031456 Ga0307513_10000100 Ga0307513_1000010038 309
168 3300035695 Ga0373927_0000173 Ga0373927_0000173_21018_21995 309
169 3300037068 Ga0373925_0000049 Ga0373925_0000049_47014_47991 309
170 3300037312 Ga0395899_0000115 Ga0395899_0000115_46934_47869 309
171 3300037418 Ga0395900_0000002 Ga0395900_0000002_84264_85199 309
172 3300037466 Ga0395898_0008120 Ga0395898_0008120_9304_10239 309
173 3300037471 Ga0395905_0021615 Ga0395905_0021615_2331_3266 309
174 3300038443 Ga0395901_0000021 Ga0395901_0000021_209710_210645 309
175 3300048905 Ga0496102_0018873 Ga0496102_0018873_1570_2511 309
176 3300048915 Ga0496112_0150747 Ga0496112_0150747_1062_2042 309
177 3300048918 Ga0496115_0009461 Ga0496115_0009461_1036_1992 309
178 3300048920 Ga0496117_0007498 Ga0496117_0007498_4555_5496 309
179 3300048922 Ga0496119_0024159 Ga0496119_0024159_1132_2073 309
180 3300048924 Ga0496121_0000042 Ga0496121_0000042_44163_45104 309
181 3300053103 Ga0500555_001950 Ga0500555_001950_814_1755 309
182 3300053104 Ga0500556_0027364 Ga0500556_0027364_170_1117 309
183 iso_pu_bacteria 2643221583 2643922509 309
184 3300003215 JGI25153J46596_10034633 JGI25153J46596_100346332 310
185 3300003322 rootL2_10019779 rootL2_100197792 310
186 3300003771 Ga0055526_1021883 Ga0055526_10218832 310
187 3300003794 Ga0055531_10000394 Ga0055531_100003945 310
188 3300004625 Ga0055543_1020017 Ga0055543_10200171 310
189 3300005262 Ga0065165_1000293 Ga0065165_100029330 310
190 3300013100 Ga0157373_10000445 Ga0157373_1000044512 310
191 3300025295 Ga0209564_1009936 Ga0209564_10099363 310
192 3300025297 Ga0209758_1002591 Ga0209758_100259112 310
193 3300025304 Ga0209257_1000247 Ga0209257_100024724 310
194 3300025932 Ga0207690_10012527 Ga0207690_100125274 310
195 3300025941 Ga0207711_10135153 Ga0207711_101351532 310
196 3300025945 Ga0207679_10021966 Ga0207679_100219663 310
197 3300026041 Ga0207639_10241466 Ga0207639_102414662 310
198 3300026078 Ga0207702_10141985 Ga0207702_101419852 310
199 3300028786 Ga0307517_10142298 Ga0307517_101422982 310
200 3300028800 Ga0265338_10031259 Ga0265338_100312591 310
201 3300029957 Ga0265324_10040021 Ga0265324_100400211 310
202 3300031251 Ga0265327_10000481 Ga0265327_1000048124 310
203 3300031251 Ga0265327_10004292 Ga0265327_100042923 310
204 3300037418 Ga0395900_0154622 Ga0395900_0154622_813_1787 310
205 3300041512 Ga0451853_0721961 Ga0451853_0721961_281_1228 310
206 3300042156 Ga0439446_0010799 Ga0439446_0010799_1106_2056 310
207 3300046460 Ga0495638_0000293 Ga0495638_0000293_8646_9587 310
208 3300046460 Ga0495638_0000996 Ga0495638_0000996_3511_4449 310
209 3300046460 Ga0495638_0001207 Ga0495638_0001207_4997_5935 310
210 3300046460 Ga0495638_0063772 Ga0495638_0063772_165_1106 310
211 3300046471 Ga0495650_0000168 Ga0495650_0000168_138829_139767 310
212 3300046506 Ga0495583_0000003 Ga0495583_0000003_608484_609422 310
213 3300046513 Ga0495616_0063204 Ga0495616_0063204_566_1507 310
214 3300046519 Ga0495632_0027560 Ga0495632_0027560_299_1240 310
215 3300046520 Ga0495637_0037856 Ga0495637_0037856_779_1717 310
216 3300046530 Ga0495654_0000016 Ga0495654_0000016_29964_30902 310
217 3300046616 Ga0495668_0103424 Ga0495668_0103424_465_1406 310
218 3300046660 Ga0495625_0017852 Ga0495625_0017852_2746_3687 310
219 3300046660 Ga0495625_0021651 Ga0495625_0021651_884_1822 310
220 3300046660 Ga0495625_0211889 Ga0495625_0211889_301_1239 310
221 3300046794 Ga0495589_0001064 Ga0495589_0001064_4659_5597 310
222 3300047469 Ga0495673_0000053 Ga0495673_0000053_37665_38603 310
223 3300047469 Ga0495673_0008002 Ga0495673_0008002_2496_3434 310
224 3300047472 Ga0495686_0019431 Ga0495686_0019431_1421_2359 310
225 3300049581 Ga0501047_0072291 Ga0501047_0072291_184_1125 310
226 3300049823 Ga0501044_0197126 Ga0501044_0197126_49_990 310
227 3300053104 Ga0500556_0000401 Ga0500556_0000401_3973_4914 310
228 3300053108 Ga0500562_001255 Ga0500562_001255_3381_4346 310
229 3300053125 Ga0500618_000117 Ga0500618_000117_34962_35900 310
230 3300053142 Ga0500577_0015547 Ga0500577_0015547_880_1818 310
231 3300053153 Ga0500616_0092913 Ga0500616_0092913_69_1007 310
232 3300053158 Ga0500627_0008215 Ga0500627_0008215_2070_3008 310
233 3300053730 Ga0500645_003961 Ga0500645_003961_1743_2684 310

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01545

Cation_efflux

Cation efflux family

20

205

0.98

PF16916

ZT_dimer

Dimerisation domain of Zinc Transporter

209

286

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
3byp-assembly1.cif.gz_B mode of action of a putative zinc transporter czrb 0.9047 217 295
6gp6-assembly1.cif.gz_A mamm ctd - copper form 0.9022 219 294
5hsp-assembly1.cif.gz_A-2 mamm ctd m250l 0.902 220 294
6h5v-assembly1.cif.gz_A mamm ctd h264e 0.9005 220 294
6h9q-assembly1.cif.gz_A-2 mamm ctd d249e - cadmium form 0.8993 219 294
ID Description Score Start End Superfamily
3h90D02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Cation efflux protein, cytoplasmic domain 0.9289 214 297 3.30.70.1350
af_Q10LJ2_305_379_3.30.70.1350 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Cation efflux protein, cytoplasmic domain 0.9194 223 292 3.30.70.1350
3h90D02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Cation efflux protein, cytoplasmic domain 0.9185 214 297 3.30.70.1350
3bypB00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Cation efflux protein, cytoplasmic domain 0.9047 217 295 3.30.70.1350
af_Q2FVK7_214_286_3.30.70.1350 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Cation efflux protein, cytoplasmic domain 0.9009 223 293 3.30.70.1350
ID Description Score Start End GO Terms
AF-A0A377THM0-F1-model_v4 Ferrous iron efflux protein F 0.9396 212 297
AF-A0A378E831-F1-model_v4 deleted 0.934 217 297
AF-A0A6L7NCX7-F1-model_v4 Cation transporter 0.9234 11 210 GO:0008324
GO:0016020
AF-A0A3G9IT73-F1-model_v4 Cation transporter 0.9211 6 209 GO:0008324
GO:0016020
AF-A0A7K2BB78-F1-model_v4 deleted 0.9126 11 219

Feature Viewer

pLDDT pTM Quality
83.38 0.68 Medium
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map