F345911
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 233 | 125 | 466 | 280 |
Family's Representative Sequence
| Representative Sequence | 3300005617|Ga0068859_100400106|Ga0068859_1004001062 |
| Length | 302 |
| Sequence | MSTPEPHSPHIDPIESKLKIYFLPNLLTAGNLFCGFVALTKIVEANLEPSIEGVVNWAPIKLSLGFILLACIFDLFDGRVARMGGVESPFGREFDSLADLVSFGVAPAFLVHRVVLREVFQGPPFDHPEWGWFIASAYLLCGAFRLARFNCLATMSGGGGGKEFLGFPIPSAAGLVASLTLLIINLNEHERSLGRWKFVPAAVLVFLSAMMVSTVKYPSFKSLGLRSTSTFAKAIIAALFVGGILVMAGQRSMLRTAGYILPVLFTAYLIYGFIRPRISRRIRSEIEEEDDENGDPEMAGRD |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 2 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 3 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 4 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 6 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Metagenome | Rhizosphere |
| 9 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 10 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 11 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 12 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 13 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 14 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 15 | 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 17 | 3300005840 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 | Metagenome | Rhizosphere |
| 18 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 19 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 20 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 21 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 22 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 23 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 24 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 25 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 26 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 27 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 28 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 29 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 30 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 31 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 32 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 33 | 3300010159 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 | Metagenome | Rhizosphere |
| 34 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 35 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 36 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 37 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 38 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 39 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 40 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300028556 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG | Metagenome | Rhizosphere |
| 59 | 3300028558 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG | Metagenome | Rhizosphere |
| 60 | 3300028653 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG | Metagenome | Rhizosphere |
| 61 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 62 | 3300029957 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG | Metagenome | Rhizosphere |
| 63 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 64 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 65 | 3300031242 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG | Metagenome | Rhizosphere |
| 66 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 67 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 68 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 69 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 70 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 71 | 3300035084 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 | Metagenome | Rhizosphere |
| 72 | 3300035085 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 | Metagenome | Rhizosphere |
| 73 | 3300035089 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 | Metagenome | Rhizosphere |
| 74 | 3300035091 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 | Metagenome | Rhizosphere |
| 75 | 3300035112 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 | Metagenome | Rhizosphere |
| 76 | 3300035118 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 | Metagenome | Rhizosphere |
| 77 | 3300035242 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 | Metagenome | Rhizosphere |
| 78 | 3300035691 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 | Metagenome | Rhizosphere |
| 79 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 80 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 81 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 82 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 83 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 84 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 85 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 86 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 87 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046473 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046475 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046526 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046535 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 111 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 112 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 113 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 114 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 115 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 116 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 117 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 118 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 119 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 120 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 121 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 122 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 123 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 124 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 100 |
| Metatranscriptomes | 0 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0.43 |
| Nodule | 0 |
| Rhizoplane | 0.43 |
| Rhizosphere | 98.71 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 24.89 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0068859_100400106 | 3300005617 | Bacteria | 1469 |
| 2 | rootH1_10061555 | 3300003323 | Bacteria | 4909 |
| 3 | Ga0070683_100138068 | 3300005329 | Unclassified | 2309 |
| 4 | Ga0070683_100292126 | 3300005329 | Unclassified | 1550 |
| 5 | Ga0070660_100172834 | 3300005339 | Bacteria | 1746 |
| 6 | Ga0070689_100002918 | 3300005340 | Bacteria | 11238 |
| 7 | Ga0070689_100055802 | 3300005340 | Bacteria | 3062 |
| 8 | Ga0070689_100063527 | 3300005340 | Bacteria | 2873 |
| 9 | Ga0070661_100495425 | 3300005344 | Unclassified | 977 |
| 10 | Ga0070714_100006191 | 3300005435 | Bacteria | 9201 |
| 11 | Ga0070701_10027748 | 3300005438 | Unclassified | 2777 |
| 12 | Ga0070681_10023637 | 3300005458 | Bacteria | 6183 |
| 13 | Ga0070681_10118878 | 3300005458 | Bacteria | 2579 |
| 14 | Ga0070681_10570871 | 3300005458 | Unclassified | 1045 |
| 15 | Ga0070686_100006199 | 3300005544 | Bacteria | 6639 |
| 16 | Ga0070686_100010068 | 3300005544 | Bacteria | 5321 |
| 17 | Ga0070686_100079152 | 3300005544 | Bacteria | 2172 |
| 18 | Ga0070704_100131210 | 3300005549 | Unclassified | 1942 |
| 19 | Ga0070704_100160365 | 3300005549 | Bacteria | 1778 |
| 20 | Ga0068855_100112967 | 3300005563 | Bacteria | 3117 |
| 21 | Ga0068857_100000867 | 3300005577 | Bacteria | 22747 |
| 22 | Ga0068857_100036061 | 3300005577 | Bacteria | 4382 |
| 23 | Ga0068856_100000311 | 3300005614 | Bacteria | 53369 |
| 24 | Ga0068856_100185863 | 3300005614 | Bacteria | 2092 |
| 25 | Ga0070702_100145522 | 3300005615 | Bacteria | 1515 |
| 26 | Ga0068859_100489969 | 3300005617 | Bacteria | 1325 |
| 27 | Ga0068859_100574318 | 3300005617 | Bacteria | 1221 |
| 28 | Ga0068864_100078594 | 3300005618 | Unclassified | 2888 |
| 29 | Ga0068870_10031331 | 3300005840 | Bacteria | 2694 |
| 30 | Ga0068863_100044691 | 3300005841 | Bacteria | 4203 |
| 31 | Ga0068863_100053567 | 3300005841 | Unclassified | 3824 |
| 32 | Ga0068863_100254059 | 3300005841 | Unclassified | 1698 |
| 33 | Ga0068863_100326171 | 3300005841 | Unclassified | 1492 |
| 34 | Ga0068863_100480784 | 3300005841 | Bacteria | 1221 |
| 35 | Ga0068860_100226343 | 3300005843 | Bacteria | 1817 |
| 36 | Ga0068862_100266668 | 3300005844 | Bacteria | 1565 |
| 37 | Ga0081455_10167992 | 3300005937 | Bacteria | 1674 |
| 38 | Ga0097621_100022441 | 3300006237 | Unclassified | 4900 |
| 39 | Ga0068871_100020711 | 3300006358 | Bacteria | 5043 |
| 40 | Ga0075428_100019856 | 3300006844 | Bacteria | 7439 |
| 41 | Ga0075428_100277049 | 3300006844 | Unclassified | 1805 |
| 42 | Ga0075434_100751408 | 3300006871 | Unclassified | 992 |
| 43 | Ga0097620_100400070 | 3300006931 | Bacteria | 1469 |
| 44 | Ga0097620_100489943 | 3300006931 | Bacteria | 1325 |
| 45 | Ga0097620_100574341 | 3300006931 | Bacteria | 1221 |
| 46 | Ga0105240_10004252 | 3300009093 | Bacteria | 21893 |
| 47 | Ga0105240_10084755 | 3300009093 | Bacteria | 3885 |
| 48 | Ga0105240_10089273 | 3300009093 | Bacteria | 3770 |
| 49 | Ga0111539_10025848 | 3300009094 | Bacteria | 7189 |
| 50 | Ga0111539_10232083 | 3300009094 | Unclassified | 2149 |
| 51 | Ga0111539_10306456 | 3300009094 | Bacteria | 1848 |
| 52 | Ga0105245_10018043 | 3300009098 | Bacteria | 6165 |
| 53 | Ga0105242_10401143 | 3300009176 | Bacteria | 1280 |
| 54 | Ga0105238_10009435 | 3300009551 | Bacteria | 9768 |
| 55 | Ga0105238_10023342 | 3300009551 | Bacteria | 6306 |
| 56 | Ga0105238_10132678 | 3300009551 | Bacteria | 2469 |
| 57 | Ga0105249_10182035 | 3300009553 | Unclassified | 2045 |
| 58 | Ga0099796_10074482 | 3300010159 | Bacteria | 1233 |
| 59 | Ga0157370_10079450 | 3300013104 | Unclassified | 3089 |
| 60 | Ga0163162_10479337 | 3300013306 | Unclassified | 1375 |
| 61 | Ga0157372_10201555 | 3300013307 | Bacteria | 2305 |
| 62 | Ga0157375_10000131 | 3300013308 | Bacteria | 74862 |
| 63 | Ga0157375_10164708 | 3300013308 | Unclassified | 2361 |
| 64 | Ga0163163_10000082 | 3300014325 | Bacteria | 104633 |
| 65 | Ga0163163_10010106 | 3300014325 | Bacteria | 8463 |
| 66 | Ga0157379_10555082 | 3300014968 | Unclassified | 1069 |
| 67 | Ga0207707_10054197 | 3300025912 | Bacteria | 3491 |
| 68 | Ga0207707_10063475 | 3300025912 | Bacteria | 3215 |
| 69 | Ga0207695_10022976 | 3300025913 | Bacteria | 7062 |
| 70 | Ga0207695_10089157 | 3300025913 | Bacteria | 3102 |
| 71 | Ga0207695_10170635 | 3300025913 | Unclassified | 2101 |
| 72 | Ga0207695_10597365 | 3300025913 | Bacteria | 985 |
| 73 | Ga0207693_10355884 | 3300025915 | Unclassified | 1145 |
| 74 | Ga0207657_10160508 | 3300025919 | Bacteria | 1826 |
| 75 | Ga0207652_10083167 | 3300025921 | Bacteria | 2802 |
| 76 | Ga0207652_10098591 | 3300025921 | Bacteria | 2577 |
| 77 | Ga0207694_10005407 | 3300025924 | Bacteria | 9832 |
| 78 | Ga0207694_10036844 | 3300025924 | Bacteria | 3754 |
| 79 | Ga0207694_10053955 | 3300025924 | Bacteria | 3118 |
| 80 | Ga0207694_10361978 | 3300025924 | Bacteria | 1202 |
| 81 | Ga0207664_10004253 | 3300025929 | Bacteria | 9686 |
| 82 | Ga0207686_10362810 | 3300025934 | Bacteria | 1094 |
| 83 | Ga0207670_10014280 | 3300025936 | Bacteria | 4709 |
| 84 | Ga0207670_10036516 | 3300025936 | Bacteria | 3196 |
| 85 | Ga0207670_10321251 | 3300025936 | Bacteria | 1218 |
| 86 | Ga0207661_10314377 | 3300025944 | Unclassified | 1407 |
| 87 | Ga0207667_10134466 | 3300025949 | Bacteria | 2546 |
| 88 | Ga0207667_10419883 | 3300025949 | Unclassified | 1361 |
| 89 | Ga0207668_10250980 | 3300025972 | Bacteria | 1437 |
| 90 | Ga0207703_10098305 | 3300026035 | Bacteria | 2475 |
| 91 | Ga0207702_10014641 | 3300026078 | Bacteria | 6509 |
| 92 | Ga0207702_10046613 | 3300026078 | Bacteria | 3649 |
| 93 | Ga0207702_10248822 | 3300026078 | Bacteria | 1668 |
| 94 | Ga0207641_10040787 | 3300026088 | Bacteria | 3889 |
| 95 | Ga0207641_10167950 | 3300026088 | Unclassified | 2000 |
| 96 | Ga0207641_10298822 | 3300026088 | Bacteria | 1520 |
| 97 | Ga0207641_10736783 | 3300026088 | Bacteria | 972 |
| 98 | Ga0207676_10073022 | 3300026095 | Unclassified | 2760 |
| 99 | Ga0207676_10141883 | 3300026095 | Bacteria | 2058 |
| 100 | Ga0207676_10220468 | 3300026095 | Unclassified | 1689 |
| 101 | Ga0207674_10113102 | 3300026116 | Bacteria | 2688 |
| 102 | Ga0207675_100264371 | 3300026118 | Bacteria | 1668 |
| 103 | Ga0265337_1029333 | 3300028556 | Bacteria | 1645 |
| 104 | Ga0265326_10002523 | 3300028558 | Bacteria | 6154 |
| 105 | Ga0265326_10020256 | 3300028558 | Unclassified | 1907 |
| 106 | Ga0265323_10000225 | 3300028653 | Bacteria | 33236 |
| 107 | Ga0265323_10004999 | 3300028653 | Bacteria | 5662 |
| 108 | Ga0265323_10039835 | 3300028653 | Unclassified | 1712 |
| 109 | Ga0265338_10000108 | 3300028800 | Bacteria | 152898 |
| 110 | Ga0265338_10000177 | 3300028800 | Bacteria | 118670 |
| 111 | Ga0265338_10000670 | 3300028800 | Bacteria | 59227 |
| 112 | Ga0265338_10002315 | 3300028800 | Bacteria | 28884 |
| 113 | Ga0265338_10004881 | 3300028800 | Bacteria | 17863 |
| 114 | Ga0265338_10007228 | 3300028800 | Bacteria | 13865 |
| 115 | Ga0265338_10008014 | 3300028800 | Bacteria | 12929 |
| 116 | Ga0265338_10025058 | 3300028800 | Bacteria | 6073 |
| 117 | Ga0265338_10049240 | 3300028800 | Unclassified | 3821 |
| 118 | Ga0265338_10074805 | 3300028800 | Bacteria | 2878 |
| 119 | Ga0265324_10000785 | 3300029957 | Bacteria | 20872 |
| 120 | Ga0265324_10000983 | 3300029957 | Bacteria | 17616 |
| 121 | Ga0265324_10007974 | 3300029957 | Bacteria | 4245 |
| 122 | Ga0265324_10015625 | 3300029957 | Bacteria | 2788 |
| 123 | Ga0265324_10018173 | 3300029957 | Bacteria | 2548 |
| 124 | Ga0265324_10035646 | 3300029957 | Unclassified | 1732 |
| 125 | Ga0265324_10050445 | 3300029957 | Bacteria | 1430 |
| 126 | Ga0265324_10066078 | 3300029957 | Bacteria | 1234 |
| 127 | Ga0265320_10021019 | 3300031240 | Bacteria | 3521 |
| 128 | Ga0265325_10027102 | 3300031241 | Bacteria | 3100 |
| 129 | Ga0265325_10076641 | 3300031241 | Bacteria | 1668 |
| 130 | Ga0265329_10000221 | 3300031242 | Bacteria | 30151 |
| 131 | Ga0265340_10003639 | 3300031247 | Bacteria | 8663 |
| 132 | Ga0265339_10124390 | 3300031249 | Unclassified | 1323 |
| 133 | Ga0265327_10001275 | 3300031251 | Bacteria | 33175 |
| 134 | Ga0265327_10002571 | 3300031251 | Bacteria | 18783 |
| 135 | Ga0265327_10006359 | 3300031251 | Bacteria | 9470 |
| 136 | Ga0265316_10083270 | 3300031344 | Bacteria | 2451 |
| 137 | Ga0265316_10149509 | 3300031344 | Bacteria | 1750 |
| 138 | Ga0265316_10234997 | 3300031344 | Unclassified | 1349 |
| 139 | Ga0265314_10000037 | 3300031711 | Bacteria | 225790 |
| 140 | Ga0265314_10039067 | 3300031711 | Bacteria | 3422 |
| 141 | Ga0265314_10075852 | 3300031711 | Unclassified | 2236 |
| 142 | Ga0373928_0000049 | 3300035084 | Bacteria | 20746 |
| 143 | Ga0373929_0000669 | 3300035085 | Bacteria | 6608 |
| 144 | Ga0373944_0001132 | 3300035089 | Bacteria | 6639 |
| 145 | Ga0373951_0002581 | 3300035091 | Bacteria | 4551 |
| 146 | Ga0373932_0000001 | 3300035112 | Bacteria | 1459067 |
| 147 | Ga0373954_0045773 | 3300035118 | Bacteria | 2044 |
| 148 | Ga0373962_0000005 | 3300035242 | Bacteria | 63923 |
| 149 | Ga0373931_0000008 | 3300035691 | Bacteria | 362269 |
| 150 | Ga0373931_0056764 | 3300035691 | Unclassified | 2099 |
| 151 | Ga0373935_0074123 | 3300035692 | Unclassified | 2200 |
| 152 | Ga0373927_0012636 | 3300035695 | Bacteria | 5616 |
| 153 | Ga0373947_0004846 | 3300035725 | Bacteria | 7864 |
| 154 | Ga0373925_0000192 | 3300037068 | Bacteria | 66343 |
| 155 | Ga0373925_0011323 | 3300037068 | Bacteria | 6473 |
| 156 | Ga0395901_0511651 | 3300038443 | Unclassified | 1221 |
| 157 | Ga0451577_0003079 | 3300042876 | Bacteria | 18836 |
| 158 | Ga0451577_0271814 | 3300042876 | Unclassified | 1535 |
| 159 | Ga0451577_0526028 | 3300042876 | Unclassified | 1074 |
| 160 | Ga0453684_0005414 | 3300044712 | Bacteria | 25289 |
| 161 | Ga0453684_0011351 | 3300044712 | Bacteria | 14966 |
| 162 | Ga0453684_0225113 | 3300044712 | Bacteria | 2170 |
| 163 | Ga0453684_0263121 | 3300044712 | Bacteria | 1975 |
| 164 | Ga0453684_0571107 | 3300044712 | Bacteria | 1243 |
| 165 | Ga0451576_0249609 | 3300045051 | Bacteria | 1854 |
| 166 | Ga0451576_0324094 | 3300045051 | Unclassified | 1612 |
| 167 | Ga0451576_0391840 | 3300045051 | Unclassified | 1456 |
| 168 | Ga0451576_0453209 | 3300045051 | Bacteria | 1347 |
| 169 | Ga0451576_0515919 | 3300045051 | Bacteria | 1256 |
| 170 | Ga0495592_0001029 | 3300046454 | Bacteria | 19365 |
| 171 | Ga0495592_0135167 | 3300046454 | Bacteria | 1721 |
| 172 | Ga0495592_0145866 | 3300046454 | Bacteria | 1641 |
| 173 | Ga0495582_0076020 | 3300046473 | Bacteria | 1861 |
| 174 | Ga0495639_0038538 | 3300046475 | Bacteria | 2147 |
| 175 | Ga0495662_0044825 | 3300046476 | Bacteria | 2135 |
| 176 | Ga0495662_0046815 | 3300046476 | Bacteria | 2088 |
| 177 | Ga0495664_0091487 | 3300046477 | Bacteria | 1829 |
| 178 | Ga0495618_0125680 | 3300046514 | Bacteria | 1642 |
| 179 | Ga0495628_0000050 | 3300046516 | Bacteria | 93131 |
| 180 | Ga0495628_0035830 | 3300046516 | Bacteria | 3986 |
| 181 | Ga0495630_0000031 | 3300046517 | Bacteria | 135085 |
| 182 | Ga0495630_0010725 | 3300046517 | Bacteria | 6617 |
| 183 | Ga0495630_0028583 | 3300046517 | Bacteria | 4143 |
| 184 | Ga0495630_0077626 | 3300046517 | Unclassified | 2504 |
| 185 | Ga0495630_0142013 | 3300046517 | Bacteria | 1826 |
| 186 | Ga0495630_0191245 | 3300046517 | Bacteria | 1561 |
| 187 | Ga0495666_0005579 | 3300046526 | Bacteria | 6340 |
| 188 | Ga0495652_0102901 | 3300046529 | Bacteria | 2313 |
| 189 | Ga0495652_0183728 | 3300046529 | Unclassified | 1602 |
| 190 | Ga0495640_0005188 | 3300046533 | Bacteria | 10355 |
| 191 | Ga0495640_0055651 | 3300046533 | Unclassified | 2706 |
| 192 | Ga0495640_0144101 | 3300046533 | Unclassified | 1534 |
| 193 | Ga0495586_0000016 | 3300046535 | Bacteria | 126380 |
| 194 | Ga0495586_0000621 | 3300046535 | Bacteria | 20516 |
| 195 | Ga0495586_0039922 | 3300046535 | Unclassified | 2524 |
| 196 | Ga0495645_0034416 | 3300046543 | Unclassified | 3696 |
| 197 | Ga0495645_0044328 | 3300046543 | Bacteria | 3245 |
| 198 | Ga0495634_0041174 | 3300046642 | Unclassified | 3138 |
| 199 | Ga0495634_0336091 | 3300046642 | Unclassified | 907 |
| 200 | Ga0495599_0012455 | 3300046678 | Bacteria | 5243 |
| 201 | Ga0495599_0025628 | 3300046678 | Bacteria | 3692 |
| 202 | Ga0495658_0005936 | 3300046683 | Bacteria | 5996 |
| 203 | Ga0495613_0008725 | 3300046689 | Bacteria | 7517 |
| 204 | Ga0495624_0023979 | 3300046690 | Unclassified | 4019 |
| 205 | Ga0495624_0074918 | 3300046690 | Bacteria | 2102 |
| 206 | Ga0495600_0125443 | 3300046809 | Unclassified | 1670 |
| 207 | Ga0495674_0000264 | 3300047319 | Bacteria | 44934 |
| 208 | Ga0495674_0225260 | 3300047319 | Unclassified | 1549 |
| 209 | Ga0495674_0291377 | 3300047319 | Bacteria | 1335 |
| 210 | Ga0495676_0008570 | 3300047321 | Bacteria | 9368 |
| 211 | Ga0495676_0034074 | 3300047321 | Unclassified | 4276 |
| 212 | Ga0495675_0241950 | 3300047444 | Bacteria | 1086 |
| 213 | Ga0495684_0312004 | 3300047471 | Bacteria | 1127 |
| 214 | Ga0496115_0002799 | 3300048918 | Bacteria | 12533 |
| 215 | Ga0501031_0000113 | 3300049568 | Bacteria | 43219 |
| 216 | Ga0501032_0182294 | 3300049569 | Unclassified | 1374 |
| 217 | Ga0501033_0005945 | 3300049570 | Bacteria | 9580 |
| 218 | Ga0501033_0154947 | 3300049570 | Bacteria | 1651 |
| 219 | Ga0501034_0021311 | 3300049571 | Bacteria | 6608 |
| 220 | Ga0501043_0023186 | 3300049579 | Bacteria | 4869 |
| 221 | Ga0501046_0166963 | 3300049580 | Unclassified | 1653 |
| 222 | Ga0501080_0086181 | 3300049742 | Bacteria | 2918 |
| 223 | Ga0501083_0025064 | 3300049744 | Unclassified | 4131 |
| 224 | Ga0501035_0014293 | 3300049822 | Bacteria | 7328 |
| 225 | Ga0501035_0019055 | 3300049822 | Bacteria | 6315 |
| 226 | Ga0501044_0000792 | 3300049823 | Bacteria | 38210 |
| 227 | Ga0501044_0023447 | 3300049823 | Bacteria | 6564 |
| 228 | Ga0501044_0230037 | 3300049823 | Bacteria | 1802 |
| 229 | nmdc:mga06r32_318597_c1 | 3300050510 | Unclassified | 1540 |
| 230 | nmdc:mga08y16_108762_c1 | 3300050511 | Unclassified | 2886 |
| 231 | nmdc:mga0n895_614341_c1 | 3300050512 | Bacteria | 1088 |
| 232 | Ga0495601_0104207 | 3300053077 | Unclassified | 1833 |
| 233 | Ga0500595_057685 | 3300053119 | Bacteria | 1183 |
| 234 | Ga0068859_100400106 | |||
| 235 | rootH1_10061555 | |||
| 236 | Ga0070683_100138068 | |||
| 237 | Ga0070683_100292126 | |||
| 238 | Ga0070660_100172834 | |||
| 239 | Ga0070689_100002918 | |||
| 240 | Ga0070689_100055802 | |||
| 241 | Ga0070689_100063527 | |||
| 242 | Ga0070661_100495425 | |||
| 243 | Ga0070714_100006191 | |||
| 244 | Ga0070701_10027748 | |||
| 245 | Ga0070681_10023637 | |||
| 246 | Ga0070681_10118878 | |||
| 247 | Ga0070681_10570871 | |||
| 248 | Ga0070686_100006199 | |||
| 249 | Ga0070686_100010068 | |||
| 250 | Ga0070686_100079152 | |||
| 251 | Ga0070704_100131210 | |||
| 252 | Ga0070704_100160365 | |||
| 253 | Ga0068855_100112967 | |||
| 254 | Ga0068857_100000867 | |||
| 255 | Ga0068857_100036061 | |||
| 256 | Ga0068856_100000311 | |||
| 257 | Ga0068856_100185863 | |||
| 258 | Ga0070702_100145522 | |||
| 259 | Ga0068859_100489969 | |||
| 260 | Ga0068859_100574318 | |||
| 261 | Ga0068864_100078594 | |||
| 262 | Ga0068870_10031331 | |||
| 263 | Ga0068863_100044691 | |||
| 264 | Ga0068863_100053567 | |||
| 265 | Ga0068863_100254059 | |||
| 266 | Ga0068863_100326171 | |||
| 267 | Ga0068863_100480784 | |||
| 268 | Ga0068860_100226343 | |||
| 269 | Ga0068862_100266668 | |||
| 270 | Ga0081455_10167992 | |||
| 271 | Ga0097621_100022441 | |||
| 272 | Ga0068871_100020711 | |||
| 273 | Ga0075428_100019856 | |||
| 274 | Ga0075428_100277049 | |||
| 275 | Ga0075434_100751408 | |||
| 276 | Ga0097620_100400070 | |||
| 277 | Ga0097620_100489943 | |||
| 278 | Ga0097620_100574341 | |||
| 279 | Ga0105240_10004252 | |||
| 280 | Ga0105240_10084755 | |||
| 281 | Ga0105240_10089273 | |||
| 282 | Ga0111539_10025848 | |||
| 283 | Ga0111539_10232083 | |||
| 284 | Ga0111539_10306456 | |||
| 285 | Ga0105245_10018043 | |||
| 286 | Ga0105242_10401143 | |||
| 287 | Ga0105238_10009435 | |||
| 288 | Ga0105238_10023342 | |||
| 289 | Ga0105238_10132678 | |||
| 290 | Ga0105249_10182035 | |||
| 291 | Ga0099796_10074482 | |||
| 292 | Ga0157370_10079450 | |||
| 293 | Ga0163162_10479337 | |||
| 294 | Ga0157372_10201555 | |||
| 295 | Ga0157375_10000131 | |||
| 296 | Ga0157375_10164708 | |||
| 297 | Ga0163163_10000082 | |||
| 298 | Ga0163163_10010106 | |||
| 299 | Ga0157379_10555082 | |||
| 300 | Ga0207707_10054197 | |||
| 301 | Ga0207707_10063475 | |||
| 302 | Ga0207695_10022976 | |||
| 303 | Ga0207695_10089157 | |||
| 304 | Ga0207695_10170635 | |||
| 305 | Ga0207695_10597365 | |||
| 306 | Ga0207693_10355884 | |||
| 307 | Ga0207657_10160508 | |||
| 308 | Ga0207652_10083167 | |||
| 309 | Ga0207652_10098591 | |||
| 310 | Ga0207694_10005407 | |||
| 311 | Ga0207694_10036844 | |||
| 312 | Ga0207694_10053955 | |||
| 313 | Ga0207694_10361978 | |||
| 314 | Ga0207664_10004253 | |||
| 315 | Ga0207686_10362810 | |||
| 316 | Ga0207670_10014280 | |||
| 317 | Ga0207670_10036516 | |||
| 318 | Ga0207670_10321251 | |||
| 319 | Ga0207661_10314377 | |||
| 320 | Ga0207667_10134466 | |||
| 321 | Ga0207667_10419883 | |||
| 322 | Ga0207668_10250980 | |||
| 323 | Ga0207703_10098305 | |||
| 324 | Ga0207702_10014641 | |||
| 325 | Ga0207702_10046613 | |||
| 326 | Ga0207702_10248822 | |||
| 327 | Ga0207641_10040787 | |||
| 328 | Ga0207641_10167950 | |||
| 329 | Ga0207641_10298822 | |||
| 330 | Ga0207641_10736783 | |||
| 331 | Ga0207676_10073022 | |||
| 332 | Ga0207676_10141883 | |||
| 333 | Ga0207676_10220468 | |||
| 334 | Ga0207674_10113102 | |||
| 335 | Ga0207675_100264371 | |||
| 336 | Ga0265337_1029333 | |||
| 337 | Ga0265326_10002523 | |||
| 338 | Ga0265326_10020256 | |||
| 339 | Ga0265323_10000225 | |||
| 340 | Ga0265323_10004999 | |||
| 341 | Ga0265323_10039835 | |||
| 342 | Ga0265338_10000108 | |||
| 343 | Ga0265338_10000177 | |||
| 344 | Ga0265338_10000670 | |||
| 345 | Ga0265338_10002315 | |||
| 346 | Ga0265338_10004881 | |||
| 347 | Ga0265338_10007228 | |||
| 348 | Ga0265338_10008014 | |||
| 349 | Ga0265338_10025058 | |||
| 350 | Ga0265338_10049240 | |||
| 351 | Ga0265338_10074805 | |||
| 352 | Ga0265324_10000785 | |||
| 353 | Ga0265324_10000983 | |||
| 354 | Ga0265324_10007974 | |||
| 355 | Ga0265324_10015625 | |||
| 356 | Ga0265324_10018173 | |||
| 357 | Ga0265324_10035646 | |||
| 358 | Ga0265324_10050445 | |||
| 359 | Ga0265324_10066078 | |||
| 360 | Ga0265320_10021019 | |||
| 361 | Ga0265325_10027102 | |||
| 362 | Ga0265325_10076641 | |||
| 363 | Ga0265329_10000221 | |||
| 364 | Ga0265340_10003639 | |||
| 365 | Ga0265339_10124390 | |||
| 366 | Ga0265327_10001275 | |||
| 367 | Ga0265327_10002571 | |||
| 368 | Ga0265327_10006359 | |||
| 369 | Ga0265316_10083270 | |||
| 370 | Ga0265316_10149509 | |||
| 371 | Ga0265316_10234997 | |||
| 372 | Ga0265314_10000037 | |||
| 373 | Ga0265314_10039067 | |||
| 374 | Ga0265314_10075852 | |||
| 375 | Ga0373928_0000049 | |||
| 376 | Ga0373929_0000669 | |||
| 377 | Ga0373944_0001132 | |||
| 378 | Ga0373951_0002581 | |||
| 379 | Ga0373932_0000001 | |||
| 380 | Ga0373954_0045773 | |||
| 381 | Ga0373962_0000005 | |||
| 382 | Ga0373931_0000008 | |||
| 383 | Ga0373931_0056764 | |||
| 384 | Ga0373935_0074123 | |||
| 385 | Ga0373927_0012636 | |||
| 386 | Ga0373947_0004846 | |||
| 387 | Ga0373925_0000192 | |||
| 388 | Ga0373925_0011323 | |||
| 389 | Ga0395901_0511651 | |||
| 390 | Ga0451577_0003079 | |||
| 391 | Ga0451577_0271814 | |||
| 392 | Ga0451577_0526028 | |||
| 393 | Ga0453684_0005414 | |||
| 394 | Ga0453684_0011351 | |||
| 395 | Ga0453684_0225113 | |||
| 396 | Ga0453684_0263121 | |||
| 397 | Ga0453684_0571107 | |||
| 398 | Ga0451576_0249609 | |||
| 399 | Ga0451576_0324094 | |||
| 400 | Ga0451576_0391840 | |||
| 401 | Ga0451576_0453209 | |||
| 402 | Ga0451576_0515919 | |||
| 403 | Ga0495592_0001029 | |||
| 404 | Ga0495592_0135167 | |||
| 405 | Ga0495592_0145866 | |||
| 406 | Ga0495582_0076020 | |||
| 407 | Ga0495639_0038538 | |||
| 408 | Ga0495662_0044825 | |||
| 409 | Ga0495662_0046815 | |||
| 410 | Ga0495664_0091487 | |||
| 411 | Ga0495618_0125680 | |||
| 412 | Ga0495628_0000050 | |||
| 413 | Ga0495628_0035830 | |||
| 414 | Ga0495630_0000031 | |||
| 415 | Ga0495630_0010725 | |||
| 416 | Ga0495630_0028583 | |||
| 417 | Ga0495630_0077626 | |||
| 418 | Ga0495630_0142013 | |||
| 419 | Ga0495630_0191245 | |||
| 420 | Ga0495666_0005579 | |||
| 421 | Ga0495652_0102901 | |||
| 422 | Ga0495652_0183728 | |||
| 423 | Ga0495640_0005188 | |||
| 424 | Ga0495640_0055651 | |||
| 425 | Ga0495640_0144101 | |||
| 426 | Ga0495586_0000016 | |||
| 427 | Ga0495586_0000621 | |||
| 428 | Ga0495586_0039922 | |||
| 429 | Ga0495645_0034416 | |||
| 430 | Ga0495645_0044328 | |||
| 431 | Ga0495634_0041174 | |||
| 432 | Ga0495634_0336091 | |||
| 433 | Ga0495599_0012455 | |||
| 434 | Ga0495599_0025628 | |||
| 435 | Ga0495658_0005936 | |||
| 436 | Ga0495613_0008725 | |||
| 437 | Ga0495624_0023979 | |||
| 438 | Ga0495624_0074918 | |||
| 439 | Ga0495600_0125443 | |||
| 440 | Ga0495674_0000264 | |||
| 441 | Ga0495674_0225260 | |||
| 442 | Ga0495674_0291377 | |||
| 443 | Ga0495676_0008570 | |||
| 444 | Ga0495676_0034074 | |||
| 445 | Ga0495675_0241950 | |||
| 446 | Ga0495684_0312004 | |||
| 447 | Ga0496115_0002799 | |||
| 448 | Ga0501031_0000113 | |||
| 449 | Ga0501032_0182294 | |||
| 450 | Ga0501033_0005945 | |||
| 451 | Ga0501033_0154947 | |||
| 452 | Ga0501034_0021311 | |||
| 453 | Ga0501043_0023186 | |||
| 454 | Ga0501046_0166963 | |||
| 455 | Ga0501080_0086181 | |||
| 456 | Ga0501083_0025064 | |||
| 457 | Ga0501035_0014293 | |||
| 458 | Ga0501035_0019055 | |||
| 459 | Ga0501044_0000792 | |||
| 460 | Ga0501044_0023447 | |||
| 461 | Ga0501044_0230037 | |||
| 462 | nmdc:mga06r32_318597_c1 | |||
| 463 | nmdc:mga08y16_108762_c1 | |||
| 464 | nmdc:mga0n895_614341_c1 | |||
| 465 | Ga0495601_0104207 | |||
| 466 | Ga0500595_057685 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 7b1l-assembly1.cif.gz_A | crystal structure of phosphatidyl serine synthase (pss) in the closed conformation with bound citrate. | 0.7101 | 20 | 267 |
| 6wm5-assembly1.cif.gz_A | structure of a phosphatidylinositol-phosphate synthase (pips) from mycobacterium kansasii | 0.7038 | 21 | 211 |
| 7b1l-assembly1.cif.gz_A | crystal structure of phosphatidyl serine synthase (pss) in the closed conformation with bound citrate. | 0.6818 | 20 | 267 |
| 5d92-assembly1.cif.gz_A | structure of a phosphatidylinositolphosphate (pip) synthase from renibacterium salmoninarum | 0.6721 | 23 | 209 |
| 6h53-assembly1.cif.gz_A | crystal structure of mycobacterium tuberculosis phosphatidylinositol phosphate synthase (pgsa1) in apo form | 0.6604 | 21 | 209 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P9WPG1_2_192_1.20.120.1760 | Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);CDP-alcohol phosphotransferase transmembrane (TM) domain | 0.7946 | 7 | 217 | 1.20.120.1760 |
| af_E7F188_23_199_1.20.120.1760 | Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);CDP-alcohol phosphotransferase transmembrane (TM) domain | 0.7925 | 23 | 226 | 1.20.120.1760 |
| af_D3ZGY5_32_207_1.20.120.1760 | Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);CDP-alcohol phosphotransferase transmembrane (TM) domain | 0.7893 | 22 | 227 | 1.20.120.1760 |
| af_P9WPG1_2_192_1.20.120.1760 | Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);CDP-alcohol phosphotransferase transmembrane (TM) domain | 0.7795 | 7 | 217 | 1.20.120.1760 |
| af_O94584_24_237_1.20.120.1760 | Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);CDP-alcohol phosphotransferase transmembrane (TM) domain | 0.7736 | 13 | 211 | 1.20.120.1760 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A6A2E6M3-F1-model_v4 | deleted | 0.9072 | 22 | 213 |
|
| AF-A0A2E3NAT6-F1-model_v4 | CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8) (Phosphatidylserine synthase) | 0.8944 | 11 | 286 |
GO:0003882
GO:0008654 GO:0012505 GO:0016020 |
| AF-A0A349Q2J5-F1-model_v4 | Phosphatidylserine synthase | 0.8916 | 22 | 170 |
GO:0008654
GO:0016020 GO:0016780 |
| AF-A0A2E6S7B6-F1-model_v4 | CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8) (Phosphatidylserine synthase) | 0.8912 | 27 | 290 |
GO:0003882
GO:0008654 GO:0012505 GO:0016020 |
| AF-A0A2E6S7B6-F1-model_v4 | CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8) (Phosphatidylserine synthase) | 0.8816 | 27 | 290 |
GO:0003882
GO:0008654 GO:0012505 GO:0016020 |