F345868

General Info

Members Datasets Scaffolds Average Seq Length
233 161 233 258

Family's Representative Sequence

Representative Sequence 3300005536|Ga0070697_100027647|Ga0070697_1000276474
Length 278
Sequence MNRDDLSAALRSVGFRASTEAIRALVSHVIQNHLGPVEAFEQLVLLERRERERRNLERRTGAALLGNVVPIDRFDWSHPRRLDRALVEDLLGLGFVERHENVLLRGPSGVGKTMLARCLGLAALTQGRTVRFSTLAAALTDLLKQESLPALERRLRRYVTPDLLLLDEVGYLPCDSRAADMLYAIVDRRHEKRSTVVTTNLSFKQWGTVFPGAACVVALVDRFAQHCHVVDIDADSWRQKNALARDGRDGGGPDGAPAARGRRRAEARPEPQTEAVEF

Samples

Sample ID Description Type Environment
1 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
12 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
22 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
23 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
24 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
25 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
26 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
29 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
31 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
33 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
36 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
37 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
38 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
39 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
54 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
55 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
56 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
57 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
58 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
59 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
60 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
61 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
62 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
63 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
64 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
65 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
66 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
67 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
68 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
69 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
70 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
71 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
72 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
73 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
74 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
75 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
76 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
77 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
78 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
79 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
80 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
81 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
82 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
83 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
84 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
85 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
86 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
87 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
88 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
89 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
90 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
91 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
92 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
93 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
94 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
95 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
96 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
97 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
98 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
99 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
100 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
101 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
102 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
103 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
104 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
105 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
106 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
107 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
108 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
109 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
110 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
111 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
112 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
113 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
114 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
115 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
116 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
117 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
118 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
119 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
120 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
121 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
122 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
123 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
124 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
125 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
126 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
127 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
128 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
129 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
130 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
131 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
132 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
133 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
134 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
135 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
137 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
138 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
139 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
140 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
141 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
143 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
144 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
145 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
146 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
147 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
148 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
149 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
150 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
151 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
152 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
153 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
154 3300053124 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 endosphere Metagenome Endosphere
155 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
156 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
157 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
158 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
159 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
160 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
161 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.01
Nodule 0
Rhizoplane 2.58
Rhizosphere 85.84
Stem 0
Stem Tuber 0
Unclassified 5.58

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10153445 3300003322 Bacteria 3805
2 rootL2_10206967 3300003322 Unclassified 2189
3 rootH1_10165427 3300003323 Bacteria 3326
4 Ga0070690_100005082 3300005330 Bacteria 7375
5 Ga0070690_100147640 3300005330 Bacteria 1601
6 Ga0068869_100060143 3300005334 Bacteria 2784
7 Ga0070666_10142231 3300005335 Bacteria 1671
8 Ga0070682_100033305 3300005337 Bacteria 3130
9 Ga0068868_100047901 3300005338 Bacteria 3352
10 Ga0070689_100315964 3300005340 Bacteria 1303
11 Ga0070689_100378738 3300005340 Bacteria 1192
12 Ga0070692_10012993 3300005345 Bacteria 3871
13 Ga0070668_100028925 3300005347 Bacteria 4207
14 Ga0070701_10385708 3300005438 Bacteria 884
15 Ga0070685_10044506 3300005466 Bacteria 2541
16 Ga0070707_100476931 3300005468 Bacteria 1209
17 Ga0070698_100060302 3300005471 Bacteria 3828
18 Ga0070699_100088411 3300005518 Bacteria 2706
19 Ga0070697_100027647 3300005536 Bacteria 4539
20 Ga0068853_100426762 3300005539 Bacteria 1244
21 Ga0070686_100015422 3300005544 Bacteria 4427
22 Ga0070686_100482237 3300005544 Bacteria 959
23 Ga0068855_100223952 3300005563 Unclassified 2108
24 Ga0068859_100146447 3300005617 Bacteria 2437
25 Ga0068860_100344832 3300005843 Unclassified 1465
26 Ga0068862_100057507 3300005844 Bacteria 3335
27 Ga0081455_10110951 3300005937 Unclassified 2180
28 Ga0097621_100042390 3300006237 Bacteria 3666
29 Ga0097621_100263333 3300006237 Bacteria 1513
30 Ga0068871_100332770 3300006358 Bacteria 1340
31 Ga0075430_100108597 3300006846 Bacteria 2315
32 Ga0075430_100136401 3300006846 Bacteria 2044
33 Ga0075433_10427250 3300006852 Bacteria 1168
34 Ga0068865_100176539 3300006881 Bacteria 1642
35 Ga0097620_100146437 3300006931 Bacteria 2437
36 Ga0075435_100124418 3300007076 Bacteria 2154
37 Ga0111539_10063399 3300009094 Bacteria 4374
38 Ga0105245_10147532 3300009098 Bacteria 2221
39 Ga0105247_10059953 3300009101 Unclassified 2357
40 Ga0114129_10104193 3300009147 Unclassified 3920
41 Ga0105242_10389377 3300009176 Bacteria 1298
42 Ga0105238_10055404 3300009551 Unclassified 3980
43 Ga0105249_10063483 3300009553 Bacteria 3393
44 Ga0157374_10225461 3300013296 Bacteria 1840
45 Ga0207688_10052413 3300025901 Bacteria 2286
46 Ga0207707_10583047 3300025912 Unclassified 948
47 Ga0207694_10188681 3300025924 Unclassified 1674
48 Ga0207687_10073630 3300025927 Bacteria 2446
49 Ga0207704_10117151 3300025938 Bacteria 1814
50 Ga0207689_10054473 3300025942 Bacteria 3293
51 Ga0207712_10096437 3300025961 Bacteria 2189
52 Ga0207668_10024281 3300025972 Bacteria 3910
53 Ga0207639_10719840 3300026041 Bacteria 927
54 Ga0207708_10053401 3300026075 Bacteria 3079
55 Ga0207641_10308196 3300026088 Bacteria 1498
56 Ga0209974_10096713 3300027876 Bacteria 1028
57 Ga0268265_10279412 3300028380 Bacteria 1493
58 Ga0268264_10057148 3300028381 Bacteria 3263
59 Ga0268264_10298263 3300028381 Bacteria 1516
60 Ga0265337_1009207 3300028556 Bacteria 3541
61 Ga0265337_1019856 3300028556 Bacteria 2112
62 Ga0265319_1012805 3300028563 Bacteria 3370
63 Ga0265319_1035411 3300028563 Bacteria 1712
64 Ga0265334_10007712 3300028573 Bacteria 4611
65 Ga0265334_10010246 3300028573 Bacteria 3955
66 Ga0265318_10014914 3300028577 Bacteria 3248
67 Ga0265318_10015083 3300028577 Bacteria 3226
68 Ga0265323_10009831 3300028653 Unclassified 3892
69 Ga0265323_10076037 3300028653 Unclassified 1140
70 Ga0265322_10011649 3300028654 Bacteria 2547
71 Ga0265336_10008542 3300028666 Bacteria 3584
72 Ga0265338_10015113 3300028800 Bacteria 8516
73 Ga0265338_10135803 3300028800 Bacteria 1934
74 Ga0265338_10255931 3300028800 Bacteria 1289
75 Ga0265324_10010502 3300029957 Bacteria 3565
76 Ga0265324_10053537 3300029957 Bacteria 1385
77 Ga0307511_10078583 3300030521 Unclassified 2339
78 Ga0265330_10005201 3300031235 Bacteria 6506
79 Ga0265330_10014191 3300031235 Bacteria 3698
80 Ga0265330_10018216 3300031235 Bacteria 3227
81 Ga0265330_10049730 3300031235 Unclassified 1840
82 Ga0265332_10000307 3300031238 Bacteria 37860
83 Ga0265332_10008160 3300031238 Bacteria 4709
84 Ga0265328_10002513 3300031239 Bacteria 8225
85 Ga0265328_10009657 3300031239 Bacteria 3921
86 Ga0265328_10013576 3300031239 Bacteria 3222
87 Ga0265328_10102179 3300031239 Bacteria 1062
88 Ga0265320_10000640 3300031240 Bacteria 26770
89 Ga0265320_10014608 3300031240 Bacteria 4462
90 Ga0265320_10014614 3300031240 Bacteria 4461
91 Ga0265325_10019980 3300031241 Bacteria 3696
92 Ga0265325_10021862 3300031241 Bacteria 3508
93 Ga0265325_10023287 3300031241 Bacteria 3383
94 Ga0265329_10000712 3300031242 Bacteria 16884
95 Ga0265329_10009143 3300031242 Bacteria 3713
96 Ga0265329_10009961 3300031242 Bacteria 3515
97 Ga0265329_10011417 3300031242 Bacteria 3227
98 Ga0265329_10115144 3300031242 Unclassified 860
99 Ga0265340_10020749 3300031247 Bacteria 3373
100 Ga0265339_10020981 3300031249 Bacteria 3809
101 Ga0265339_10022778 3300031249 Bacteria 3625
102 Ga0265339_10025509 3300031249 Bacteria 3392
103 Ga0265339_10129880 3300031249 Unclassified 1289
104 Ga0265339_10201475 3300031249 Unclassified 981
105 Ga0265331_10011886 3300031250 Bacteria 4744
106 Ga0265331_10014835 3300031250 Unclassified 4134
107 Ga0265331_10020514 3300031250 Bacteria 3391
108 Ga0265331_10022354 3300031250 Bacteria 3227
109 Ga0265327_10099232 3300031251 Bacteria 1408
110 Ga0265316_10001188 3300031344 Bacteria 28203
111 Ga0265316_10022392 3300031344 Bacteria 5327
112 Ga0265316_10025359 3300031344 Bacteria 4949
113 Ga0265316_10120823 3300031344 Bacteria 1978
114 Ga0265316_10276373 3300031344 Unclassified 1228
115 Ga0307509_10036686 3300031507 Bacteria 5365
116 Ga0307509_10080634 3300031507 Archaea 3365
117 Ga0307509_10283024 3300031507 Bacteria 1418
118 Ga0265313_10024221 3300031595 Bacteria 3246
119 Ga0265313_10024435 3300031595 Bacteria 3227
120 Ga0265313_10026647 3300031595 Bacteria 3040
121 Ga0307508_10054085 3300031616 Bacteria 3560
122 Ga0307508_10057080 3300031616 Bacteria 3455
123 Ga0307508_10213902 3300031616 Bacteria 1528
124 Ga0265314_10004011 3300031711 Bacteria 13918
125 Ga0265314_10039948 3300031711 Bacteria 3373
126 Ga0265314_10042783 3300031711 Bacteria 3226
127 Ga0265314_10048622 3300031711 Bacteria 2975
128 Ga0265314_10134266 3300031711 Unclassified 1539
129 Ga0265342_10000049 3300031712 Bacteria 125977
130 Ga0265342_10000253 3300031712 Bacteria 60170
131 Ga0265342_10004329 3300031712 Bacteria 11238
132 Ga0265342_10009621 3300031712 Bacteria 6786
133 Ga0265342_10015067 3300031712 Bacteria 5100
134 Ga0265342_10021711 3300031712 Bacteria 4093
135 Ga0265342_10024992 3300031712 Bacteria 3762
136 Ga0265342_10031863 3300031712 Unclassified 3254
137 Ga0316576_10045832 3300031727 Unclassified 3163
138 Ga0316578_10008075 3300031728 Bacteria 5325
139 Ga0316578_10012175 3300031728 Unclassified 4529
140 Ga0316577_10023021 3300031733 Bacteria 3459
141 Ga0307406_10009048 3300031901 Bacteria 5570
142 Ga0307409_100024224 3300031995 Unclassified 4228
143 Ga0307416_100310509 3300032002 Bacteria 1573
144 Ga0307411_10038339 3300032005 Unclassified 3022
145 Ga0307415_100013724 3300032126 Bacteria 4738
146 Ga0307415_100062562 3300032126 Bacteria 2582
147 Ga0316585_10005270 3300032137 Bacteria 3645
148 Ga0316580_10014687 3300032139 Bacteria 2392
149 Ga0307507_10176809 3300033179 Bacteria 1536
150 Ga0373958_0013319 3300034819 Bacteria 1422
151 Ga0373928_0022384 3300035084 Bacteria 1340
152 Ga0373934_0011176 3300035086 Bacteria 3380
153 Ga0373949_0000585 3300035090 Bacteria 11960
154 Ga0373936_0000016 3300035113 Bacteria 198547
155 Ga0373939_0003952 3300035114 Bacteria 3489
156 Ga0373953_0005381 3300035117 Bacteria 4149
157 Ga0373954_0013023 3300035118 Bacteria 3701
158 Ga0373956_0008732 3300035119 Bacteria 4104
159 Ga0373957_0008128 3300035120 Bacteria 3387
160 Ga0373955_0012613 3300035172 Bacteria 4064
161 Ga0373924_0009704 3300035410 Bacteria 3536
162 Ga0373935_0199380 3300035692 Bacteria 1382
163 Ga0373933_0023618 3300035724 Bacteria 3514
164 Ga0373947_0073495 3300035725 Bacteria 2101
165 Ga0373937_0049677 3300036401 Bacteria 3840
166 Ga0316582_0027577 3300036647 Unclassified 3432
167 Ga0316584_0031863 3300036712 Bacteria 3898
168 Ga0395905_0424924 3300037471 Unclassified 1225
169 Ga0436363_0553433 3300039450 Bacteria 2505
170 Ga0436363_0992163 3300039450 Bacteria 2338
171 Ga0453683_0016435 3300044673 Bacteria 4773
172 Ga0453684_0066265 3300044712 Bacteria 4599
173 Ga0453684_0079027 3300044712 Bacteria 4113
174 Ga0453684_0116950 3300044712 Bacteria 3227
175 Ga0453684_0234998 3300044712 Bacteria 2114
176 Ga0466968_0043538 3300044735 Bacteria 1901
177 Ga0466957_0106554 3300044842 Bacteria 1773
178 Ga0466960_0042279 3300044901 Bacteria 2163
179 Ga0451576_0062101 3300045051 Bacteria 3895
180 Ga0451576_0424633 3300045051 Bacteria 1395
181 Ga0466958_0477778 3300045836 Bacteria 808
182 Ga0466967_0539648 3300045976 Bacteria 1147
183 Ga0495603_0048768 3300046455 Unclassified 2521
184 Ga0495638_0031272 3300046460 Bacteria 3421
185 Ga0495596_0010476 3300046500 Bacteria 4035
186 Ga0495632_0017939 3300046519 Bacteria 3893
187 Ga0495643_0020153 3300046522 Unclassified 3851
188 Ga0495654_0022197 3300046530 Bacteria 3298
189 Ga0495654_0078244 3300046530 Bacteria 1555
190 Ga0495611_0050179 3300046648 Bacteria 1879
191 Ga0495649_0018503 3300046694 Unclassified 3919
192 Ga0495680_0054455 3300047322 Bacteria 3106
193 Ga0495673_0077713 3300047469 Bacteria 1382
194 Ga0496104_0046520 3300048907 Bacteria 4086
195 Ga0496105_0045103 3300048908 Bacteria 3637
196 Ga0496108_0043165 3300048911 Bacteria 3766
197 Ga0496109_0044626 3300048912 Bacteria 4021
198 Ga0496110_0043733 3300048913 Bacteria 3911
199 Ga0496111_0030013 3300048914 Bacteria 3864
200 Ga0495682_0010453 3300049460 Unclassified 3592
201 Ga0495682_0058442 3300049460 Bacteria 1395
202 Ga0501034_0611367 3300049571 Unclassified 995
203 Ga0501070_0025159 3300049586 Unclassified 4992
204 Ga0501070_0036305 3300049586 Unclassified 4116
205 Ga0501071_0035716 3300049587 Bacteria 3542
206 Ga0501073_0289974 3300049589 Bacteria 1129
207 Ga0501080_0445588 3300049742 Bacteria 1161
208 Ga0501083_0148734 3300049744 Archaea 1533
209 Ga0501035_0148059 3300049822 Bacteria 2038
210 Ga0501044_0308772 3300049823 Unclassified 1509
211 nmdc:mga05p37_85592_c1 3300050507 Unclassified 3885
212 nmdc:mga0qj67_335188_c1 3300050509 Bacteria 1224
213 nmdc:mga0qj67_46301_c1 3300050509 Bacteria 3434
214 nmdc:mga0rr50_27008_c1 3300050513 Bacteria 4014
215 Ga0495595_0095818 3300053084 Unclassified 1428
216 Ga0495619_0031514 3300053085 Bacteria 3435
217 Ga0495619_0032837 3300053085 Bacteria 3369
218 Ga0500646_0004598 3300053090 Bacteria 3490
219 Ga0500646_0075992 3300053090 Bacteria 1016
220 Ga0500583_0011689 3300053092 Bacteria 3320
221 Ga0500566_0091952 3300053094 Unclassified 1676
222 Ga0500566_0170187 3300053094 Bacteria 1127
223 Ga0500554_006071 3300053102 Bacteria 2686
224 Ga0500555_002234 3300053103 Bacteria 5651
225 Ga0500597_001814 3300053120 Bacteria 5639
226 Ga0500617_046229 3300053124 Bacteria 1946
227 Ga0500559_0012421 3300053136 Bacteria 3620
228 Ga0500579_155333 3300053143 Bacteria 983
229 Ga0500604_0041761 3300053151 Bacteria 1388
230 Ga0500630_110879 3300053159 Bacteria 1233
231 Ga0500637_0013618 3300053178 Bacteria 4271
232 Ga0501084_0058257 3300054114 Bacteria 3232
233 Ga0530510_0112936 3300061734 Bacteria 1991

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300031901 Ga0307406_10009048 Ga0307406_100090482 213
2 3300032126 Ga0307415_100062562 Ga0307415_1000625622 213
3 3300031712 Ga0265342_10021711 Ga0265342_100217114 224
4 3300061734 Ga0530510_0112936 Ga0530510_0112936_986_1771 226
5 3300049822 Ga0501035_0148059 Ga0501035_0148059_1171_1956 228
6 3300009147 Ga0114129_10104193 Ga0114129_101041932 229
7 3300031711 Ga0265314_10134266 Ga0265314_101342661 229
8 3300050507 nmdc:mga05p37_85592_c1 nmdc:mga05p37_85592_c1_375_1193 229
9 3300045836 Ga0466958_0477778 Ga0466958_0477778_25_738 231
10 3300005340 Ga0070689_100315964 Ga0070689_1003159642 232
11 3300032002 Ga0307416_100310509 Ga0307416_1003105091 237
12 3300031235 Ga0265330_10049730 Ga0265330_100497302 239
13 3300031250 Ga0265331_10014835 Ga0265331_100148352 239
14 3300031344 Ga0265316_10276373 Ga0265316_102763732 239
15 3300031616 Ga0307508_10054085 Ga0307508_100540852 239
16 3300031712 Ga0265342_10024992 Ga0265342_100249921 239
17 3300046530 Ga0495654_0022197 Ga0495654_0022197_210_989 239
18 3300053094 Ga0500566_0170187 Ga0500566_0170187_167_946 239
19 3300035725 Ga0373947_0073495 Ga0373947_0073495_158_961 241
20 3300046455 Ga0495603_0048768 Ga0495603_0048768_117_899 242
21 3300046460 Ga0495638_0031272 Ga0495638_0031272_229_1011 242
22 3300046519 Ga0495632_0017939 Ga0495632_0017939_2515_3297 242
23 3300046522 Ga0495643_0020153 Ga0495643_0020153_337_1119 242
24 3300046694 Ga0495649_0018503 Ga0495649_0018503_2589_3371 242
25 3300049460 Ga0495682_0010453 Ga0495682_0010453_190_972 242
26 3300049460 Ga0495682_0058442 Ga0495682_0058442_483_1265 242
27 3300053094 Ga0500566_0091952 Ga0500566_0091952_313_1116 242
28 3300053102 Ga0500554_006071 Ga0500554_006071_1640_2443 242
29 3300053159 Ga0500630_110879 Ga0500630_110879_122_925 242
30 3300053178 Ga0500637_0013618 Ga0500637_0013618_2096_2899 242
31 3300028653 Ga0265323_10009831 Ga0265323_100098312 243
32 3300031235 Ga0265330_10005201 Ga0265330_100052014 243
33 3300031239 Ga0265328_10102179 Ga0265328_101021792 243
34 3300031242 Ga0265329_10000712 Ga0265329_1000071215 243
35 3300031242 Ga0265329_10115144 Ga0265329_101151441 243
36 3300031249 Ga0265339_10129880 Ga0265339_101298802 243
37 3300031344 Ga0265316_10001188 Ga0265316_1000118830 243
38 3300031344 Ga0265316_10120823 Ga0265316_101208233 243
39 3300031711 Ga0265314_10048622 Ga0265314_100486222 243
40 3300031712 Ga0265342_10000253 Ga0265342_1000025330 243
41 3300031712 Ga0265342_10031863 Ga0265342_100318634 243
42 3300028556 Ga0265337_1019856 Ga0265337_10198562 244
43 3300028563 Ga0265319_1012805 Ga0265319_10128052 244
44 3300028573 Ga0265334_10007712 Ga0265334_100077122 244
45 3300028577 Ga0265318_10015083 Ga0265318_100150831 244
46 3300028653 Ga0265323_10076037 Ga0265323_100760372 244
47 3300028666 Ga0265336_10008542 Ga0265336_100085423 244
48 3300028800 Ga0265338_10015113 Ga0265338_100151131 244
49 3300028800 Ga0265338_10255931 Ga0265338_102559311 244
50 3300029957 Ga0265324_10053537 Ga0265324_100535371 244
51 3300031235 Ga0265330_10018216 Ga0265330_100182161 244
52 3300031238 Ga0265332_10000307 Ga0265332_1000030731 244
53 3300031239 Ga0265328_10009657 Ga0265328_100096576 244
54 3300031239 Ga0265328_10013576 Ga0265328_100135761 244
55 3300031240 Ga0265320_10000640 Ga0265320_1000064024 244
56 3300031240 Ga0265320_10014614 Ga0265320_100146145 244
57 3300031241 Ga0265325_10019980 Ga0265325_100199802 244
58 3300031242 Ga0265329_10009961 Ga0265329_100099613 244
59 3300031242 Ga0265329_10011417 Ga0265329_100114171 244
60 3300031247 Ga0265340_10020749 Ga0265340_100207491 244
61 3300031249 Ga0265339_10020981 Ga0265339_100209814 244
62 3300031249 Ga0265339_10025509 Ga0265339_100255093 244
63 3300031249 Ga0265339_10201475 Ga0265339_102014752 244
64 3300031250 Ga0265331_10020514 Ga0265331_100205143 244
65 3300031250 Ga0265331_10022354 Ga0265331_100223543 244
66 3300031344 Ga0265316_10022392 Ga0265316_100223926 244
67 3300031595 Ga0265313_10024435 Ga0265313_100244353 244
68 3300031595 Ga0265313_10026647 Ga0265313_100266473 244
69 3300031616 Ga0307508_10213902 Ga0307508_102139021 244
70 3300031711 Ga0265314_10004011 Ga0265314_1000401110 244
71 3300031711 Ga0265314_10042783 Ga0265314_100427831 244
72 3300031712 Ga0265342_10000049 Ga0265342_1000004995 244
73 3300031712 Ga0265342_10004329 Ga0265342_100043298 244
74 3300031712 Ga0265342_10009621 Ga0265342_100096213 244
75 3300044712 Ga0453684_0116950 Ga0453684_0116950_2308_3063 244
76 3300045051 Ga0451576_0424633 Ga0451576_0424633_257_1012 244
77 3300031251 Ga0265327_10099232 Ga0265327_100992321 245
78 3300044673 Ga0453683_0016435 Ga0453683_0016435_3537_4334 245
79 3300005468 Ga0070707_100476931 Ga0070707_1004769311 246
80 3300005844 Ga0068862_100057507 Ga0068862_1000575071 246
81 3300030521 Ga0307511_10078583 Ga0307511_100785832 246
82 3300039450 Ga0436363_0992163 Ga0436363_0992163_88_876 246
83 3300044712 Ga0453684_0079027 Ga0453684_0079027_322_1083 246
84 3300044735 Ga0466968_0043538 Ga0466968_0043538_1095_1853 246
85 3300048907 Ga0496104_0046520 Ga0496104_0046520_2859_3620 247
86 3300048908 Ga0496105_0045103 Ga0496105_0045103_131_892 247
87 3300048911 Ga0496108_0043165 Ga0496108_0043165_515_1276 247
88 3300048912 Ga0496109_0044626 Ga0496109_0044626_2643_3404 247
89 3300048913 Ga0496110_0043733 Ga0496110_0043733_664_1425 247
90 3300048914 Ga0496111_0030013 Ga0496111_0030013_2711_3472 247
91 3300003322 rootL2_10206967 rootL2_102069672 248
92 3300005518 Ga0070699_100088411 Ga0070699_1000884113 248
93 3300009551 Ga0105238_10055404 Ga0105238_100554042 248
94 3300031241 Ga0265325_10023287 Ga0265325_100232874 248
95 3300044712 Ga0453684_0066265 Ga0453684_0066265_685_1476 248
96 3300044842 Ga0466957_0106554 Ga0466957_0106554_980_1744 248
97 3300044901 Ga0466960_0042279 Ga0466960_0042279_832_1596 248
98 3300049589 Ga0501073_0289974 Ga0501073_0289974_248_1021 248
99 3300053136 Ga0500559_0012421 Ga0500559_0012421_2463_3227 248
100 3300054114 Ga0501084_0058257 Ga0501084_0058257_330_1103 248
101 3300005843 Ga0068860_100344832 Ga0068860_1003448322 249
102 3300026088 Ga0207641_10308196 Ga0207641_103081962 249
103 3300027876 Ga0209974_10096713 Ga0209974_100967131 249
104 3300032005 Ga0307411_10038339 Ga0307411_100383394 249
105 3300053090 Ga0500646_0075992 Ga0500646_0075992_30_797 249
106 3300053103 Ga0500555_002234 Ga0500555_002234_2028_2795 249
107 3300005937 Ga0081455_10110951 Ga0081455_101109511 250
108 3300009101 Ga0105247_10059953 Ga0105247_100599532 250
109 3300028381 Ga0268264_10298263 Ga0268264_102982631 250
110 3300005466 Ga0070685_10044506 Ga0070685_100445062 251
111 3300006846 Ga0075430_100108597 Ga0075430_1001085972 251
112 3300006846 Ga0075430_100136401 Ga0075430_1001364012 251
113 3300006852 Ga0075433_10427250 Ga0075433_104272502 251
114 3300009094 Ga0111539_10063399 Ga0111539_100633994 251
115 3300031995 Ga0307409_100024224 Ga0307409_1000242245 251
116 3300050509 nmdc:mga0qj67_335188_c1 nmdc:mga0qj67_335188_c1_345_1121 251
117 3300050509 nmdc:mga0qj67_46301_c1 nmdc:mga0qj67_46301_c1_2215_2991 251
118 3300037471 Ga0395905_0424924 Ga0395905_0424924_153_932 252
119 3300005330 Ga0070690_100005082 Ga0070690_1000050826 253
120 3300005330 Ga0070690_100147640 Ga0070690_1001476402 253
121 3300005335 Ga0070666_10142231 Ga0070666_101422312 253
122 3300005337 Ga0070682_100033305 Ga0070682_1000333051 253
123 3300005338 Ga0068868_100047901 Ga0068868_1000479012 253
124 3300005340 Ga0070689_100378738 Ga0070689_1003787382 253
125 3300005345 Ga0070692_10012993 Ga0070692_100129934 253
126 3300005347 Ga0070668_100028925 Ga0070668_1000289255 253
127 3300005438 Ga0070701_10385708 Ga0070701_103857081 253
128 3300005539 Ga0068853_100426762 Ga0068853_1004267621 253
129 3300005544 Ga0070686_100015422 Ga0070686_1000154223 253
130 3300005544 Ga0070686_100482237 Ga0070686_1004822371 253
131 3300006237 Ga0097621_100042390 Ga0097621_1000423901 253
132 3300006358 Ga0068871_100332770 Ga0068871_1003327701 253
133 3300006881 Ga0068865_100176539 Ga0068865_1001765392 253
134 3300009098 Ga0105245_10147532 Ga0105245_101475322 253
135 3300009176 Ga0105242_10389377 Ga0105242_103893772 253
136 3300009553 Ga0105249_10063483 Ga0105249_100634834 253
137 3300013296 Ga0157374_10225461 Ga0157374_102254612 253
138 3300025938 Ga0207704_10117151 Ga0207704_101171512 253
139 3300025961 Ga0207712_10096437 Ga0207712_100964372 253
140 3300025972 Ga0207668_10024281 Ga0207668_100242812 253
141 3300026041 Ga0207639_10719840 Ga0207639_107198401 253
142 3300028380 Ga0268265_10279412 Ga0268265_102794121 253
143 3300028381 Ga0268264_10057148 Ga0268264_100571483 253
144 3300028556 Ga0265337_1009207 Ga0265337_10092071 253
145 3300028563 Ga0265319_1035411 Ga0265319_10354112 253
146 3300028573 Ga0265334_10010246 Ga0265334_100102463 253
147 3300028577 Ga0265318_10014914 Ga0265318_100149143 253
148 3300028654 Ga0265322_10011649 Ga0265322_100116491 253
149 3300028800 Ga0265338_10135803 Ga0265338_101358032 253
150 3300029957 Ga0265324_10010502 Ga0265324_100105024 253
151 3300031235 Ga0265330_10014191 Ga0265330_100141913 253
152 3300031238 Ga0265332_10008160 Ga0265332_100081603 253
153 3300031239 Ga0265328_10002513 Ga0265328_100025139 253
154 3300031240 Ga0265320_10014608 Ga0265320_100146083 253
155 3300031241 Ga0265325_10021862 Ga0265325_100218624 253
156 3300031242 Ga0265329_10009143 Ga0265329_100091433 253
157 3300031249 Ga0265339_10022778 Ga0265339_100227781 253
158 3300031250 Ga0265331_10011886 Ga0265331_100118863 253
159 3300031344 Ga0265316_10025359 Ga0265316_100253593 253
160 3300031507 Ga0307509_10283024 Ga0307509_102830242 253
161 3300031595 Ga0265313_10024221 Ga0265313_100242213 253
162 3300031711 Ga0265314_10039948 Ga0265314_100399482 253
163 3300031712 Ga0265342_10015067 Ga0265342_100150672 253
164 3300034819 Ga0373958_0013319 Ga0373958_0013319_438_1220 253
165 3300035086 Ga0373934_0011176 Ga0373934_0011176_96_893 253
166 3300035090 Ga0373949_0000585 Ga0373949_0000585_10907_11689 253
167 3300035113 Ga0373936_0000016 Ga0373936_0000016_48545_49327 253
168 3300035117 Ga0373953_0005381 Ga0373953_0005381_486_1283 253
169 3300035118 Ga0373954_0013023 Ga0373954_0013023_62_859 253
170 3300035119 Ga0373956_0008732 Ga0373956_0008732_2905_3702 253
171 3300035120 Ga0373957_0008128 Ga0373957_0008128_166_963 253
172 3300035172 Ga0373955_0012613 Ga0373955_0012613_3181_3978 253
173 3300035410 Ga0373924_0009704 Ga0373924_0009704_332_1129 253
174 3300035692 Ga0373935_0199380 Ga0373935_0199380_316_1113 253
175 3300035724 Ga0373933_0023618 Ga0373933_0023618_2432_3229 253
176 3300036401 Ga0373937_0049677 Ga0373937_0049677_437_1234 253
177 3300039450 Ga0436363_0553433 Ga0436363_0553433_1568_2350 253
178 3300047322 Ga0495680_0054455 Ga0495680_0054455_105_902 253
179 3300053085 Ga0495619_0032837 Ga0495619_0032837_150_947 253
180 3300005563 Ga0068855_100223952 Ga0068855_1002239522 254
181 3300006237 Ga0097621_100263333 Ga0097621_1002633331 254
182 3300025912 Ga0207707_10583047 Ga0207707_105830472 254
183 3300031507 Ga0307509_10080634 Ga0307509_100806343 254
184 3300031616 Ga0307508_10057080 Ga0307508_100570803 254
185 3300033179 Ga0307507_10176809 Ga0307507_101768092 254
186 3300046500 Ga0495596_0010476 Ga0495596_0010476_666_1454 254
187 3300049571 Ga0501034_0611367 Ga0501034_0611367_115_903 254
188 3300049586 Ga0501070_0025159 Ga0501070_0025159_3128_3916 254
189 3300049586 Ga0501070_0036305 Ga0501070_0036305_169_957 254
190 3300049587 Ga0501071_0035716 Ga0501071_0035716_2593_3381 254
191 3300049742 Ga0501080_0445588 Ga0501080_0445588_50_838 254
192 3300049744 Ga0501083_0148734 Ga0501083_0148734_201_989 254
193 3300049823 Ga0501044_0308772 Ga0501044_0308772_335_1123 254
194 3300025901 Ga0207688_10052413 Ga0207688_100524132 255
195 3300025927 Ga0207687_10073630 Ga0207687_100736302 255
196 3300026075 Ga0207708_10053401 Ga0207708_100534011 255
197 3300032126 Ga0307415_100013724 Ga0307415_1000137243 255
198 3300035084 Ga0373928_0022384 Ga0373928_0022384_255_1043 255
199 3300044712 Ga0453684_0234998 Ga0453684_0234998_705_1496 255
200 3300045051 Ga0451576_0062101 Ga0451576_0062101_1023_1814 255
201 3300025924 Ga0207694_10188681 Ga0207694_101886812 256
202 3300035114 Ga0373939_0003952 Ga0373939_0003952_2091_2879 256
203 3300031727 Ga0316576_10045832 Ga0316576_100458324 257
204 3300031728 Ga0316578_10008075 Ga0316578_100080754 257
205 3300031728 Ga0316578_10012175 Ga0316578_100121752 257
206 3300031733 Ga0316577_10023021 Ga0316577_100230212 257
207 3300032137 Ga0316585_10005270 Ga0316585_100052703 257
208 3300032139 Ga0316580_10014687 Ga0316580_100146871 257
209 3300036647 Ga0316582_0027577 Ga0316582_0027577_138_935 257
210 3300036712 Ga0316584_0031863 Ga0316584_0031863_628_1425 257
211 3300005471 Ga0070698_100060302 Ga0070698_1000603024 258
212 3300045976 Ga0466967_0539648 Ga0466967_0539648_231_1046 259
213 3300053084 Ga0495595_0095818 Ga0495595_0095818_334_1137 260
214 3300053085 Ga0495619_0031514 Ga0495619_0031514_394_1197 260
215 3300053120 Ga0500597_001814 Ga0500597_001814_1608_2429 267
216 3300005617 Ga0068859_100146447 Ga0068859_1001464472 268
217 3300006931 Ga0097620_100146437 Ga0097620_1001464372 268
218 3300005334 Ga0068869_100060143 Ga0068869_1000601433 270
219 3300007076 Ga0075435_100124418 Ga0075435_1001244181 270
220 3300025942 Ga0207689_10054473 Ga0207689_100544733 270
221 3300050513 nmdc:mga0rr50_27008_c1 nmdc:mga0rr50_27008_c1_120_953 270
222 3300003322 rootL2_10153445 rootL2_101534455 271
223 3300003323 rootH1_10165427 rootH1_101654273 271
224 3300005536 Ga0070697_100027647 Ga0070697_1000276474 271
225 3300031507 Ga0307509_10036686 Ga0307509_100366866 271
226 3300046530 Ga0495654_0078244 Ga0495654_0078244_572_1405 271
227 3300046648 Ga0495611_0050179 Ga0495611_0050179_705_1538 271
228 3300047469 Ga0495673_0077713 Ga0495673_0077713_349_1182 271
229 3300053090 Ga0500646_0004598 Ga0500646_0004598_171_1004 271
230 3300053092 Ga0500583_0011689 Ga0500583_0011689_160_993 271
231 3300053124 Ga0500617_046229 Ga0500617_046229_513_1346 271
232 3300053143 Ga0500579_155333 Ga0500579_155333_47_880 271
233 3300053151 Ga0500604_0041761 Ga0500604_0041761_362_1195 271

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01695

IstB_IS21

IstB-like ATP binding protein

8

245

0.96

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

102

205

0.68

Structural Annotation

Top 5 Hits

ID Description Score Start End
5bq5-assembly3.cif.gz_C crystal structure of the istb aaa+ domain bound to adp-bef3 0.9278 64 240
5bq5-assembly3.cif.gz_C crystal structure of the istb aaa+ domain bound to adp-bef3 0.9082 64 240
5he8-assembly2.cif.gz_E bacterial initiation protein 0.8478 79 230
3r8f-assembly1.cif.gz_D replication initiator dnaa bound to amppcp and single-stranded dna 0.8247 79 229
1l8q-assembly1.cif.gz_A crystal structure of dna replication initiation factor 0.8188 79 229
ID Description Score Start End Superfamily
5bq5A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9158 64 240 3.40.50.300
af_P96287_79_227_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9043 95 235 3.40.50.300
af_Q50701_63_248_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9018 57 235 3.40.50.300
5bq5A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8964 64 240 3.40.50.300
af_Q50701_63_248_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8656 57 235 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A7W1PG09-F1-model_v4 ATP-binding protein 0.9673 87 198 GO:0005524
GO:0006260
GO:0016887
AF-A0A158L165-F1-model_v4 ATPase AAA 0.9655 87 237 GO:0005524
GO:0006260
GO:0016887
AF-A3JL55-F1-model_v4 IstB transposition helper protein 0.9581 53 237 GO:0005524
GO:0006260
GO:0016887
AF-A0A1E7YP58-F1-model_v4 IstB-like ATP-binding domain-containing protein 0.957 96 196 GO:0005524
GO:0006260
AF-A0A832EAG2-F1-model_v4 deleted 0.9521 125 237

Feature Viewer

pLDDT pTM Quality
80.34 0.68 Medium
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map