F345631

General Info

Members Datasets Scaffolds Average Seq Length
232 180 464 748

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2856741275|2856744196
Length 774
Sequence QPREHGTSEHGTSEHGASEHGARRRGAGQEAAAHGAWRGFRGTAWRERIDVRDFIQANYTPYQGDESFLAGPTERTRAVWAEVSGLFPEERRRGVYDVDTATPSSITSHRPGYIDCGRELIVGLQTDAPLKRAIMPAGGLRMVENGLAAYGYTLAPQVKEIFTRYRKTHNDGVFDAYTPEIRAARRAGVITGLPDAYGRGRIIGDYRRVALYGVDRLVEAKRAELHSLDGEFSTDAVVRDREELAEQIRALGELKTMAASYGHDISHPAATAHEAIQWLYFAYLAAVKEQNGAAMSLGRTSTFVDVYLERDLAEGWLTEQEAQELVDDFVIKLRIVRFLRTPEYDQLFSGDPTWVTESIGGIGADGRPLVTRTSYRYLQTLRNLGPAPEPNLTVFWSPRLPEPFKRFCARLSIETSSIQYESDELMRPAYGDDTAIACCVSAAPVGRQMQFFGARVNLAKTLLYAINGGRDEISGEQVGPAYPALTGDVLDYEEVAAAFDRMMDWLAKTYVNALNVIHYMHDKYAYERIEMALHDYPVKRTLACGIAGLSVAADSLSAIRHAKVRVLRDVTGLAVDYVVEGDYPAYGNNDDRADAIAADLVRAFMDKIRRHPAYRDAEHTQSVLTITSNVVYGRHTGNTPDGRRAGTPFAPGANPMNGRDRHGLVASALSVAKLPYDQAQDGISLTSTVTPEGLGRTVEDRVADLVGVLDGYFDAGGFHMNVNVLDRATLVDAMDHPEKYPQLTIRVSGYAVNFVRLTREQQQDVIDRTFHGRL

Samples

Sample ID Description Type Environment
1 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
2 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
3 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
4 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
5 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
6 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
7 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
8 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
9 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
10 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
11 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
12 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
13 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
14 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
15 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
16 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
17 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
21 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
22 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
23 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
24 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
25 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
26 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
27 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
28 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
29 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
30 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
31 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
32 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
33 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
34 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
35 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
36 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
37 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
38 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
39 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
40 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
41 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
42 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
43 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
44 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
45 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
46 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
47 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
48 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
49 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
50 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
51 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
52 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
53 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
54 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
55 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
56 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
57 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
58 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
59 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
60 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
61 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
62 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
63 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
64 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
65 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
66 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
67 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
68 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
69 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
70 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
71 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
72 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
73 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
74 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
75 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
76 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
77 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
78 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
79 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
80 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
81 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
82 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
83 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
84 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
85 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
86 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
87 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
88 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
89 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
90 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
91 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
92 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
93 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
94 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
95 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
96 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
97 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
98 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
99 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
100 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
101 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
102 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
103 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
104 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
105 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
106 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
107 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
108 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
109 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
110 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
111 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
112 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
113 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
125 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
126 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
127 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
128 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
129 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
130 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
131 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
132 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
133 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
134 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
135 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
136 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
137 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
138 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
139 2643221647 Streptomyces sp. Root369 Isolate Unclassified
140 2643221670 Streptomyces sp. Root431 Isolate Unclassified
141 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
142 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
143 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
144 2643221714 Streptomyces sp. Root264 Isolate Unclassified
145 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
146 2738541272 Promicromonospora sp. AC04 Isolate Unclassified
147 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
148 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
149 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
150 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
151 2808606394 Promicromonospora sp. C35 Isolate Unclassified
152 2808606448 Streptomyces sp. 193411 Isolate Unclassified
153 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
154 2839986021 Cellulosimicrobium cellulans JZ5 Isolate Unclassified
155 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
156 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
157 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
158 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
159 2867428634 Streptomyces sp. RP5T Isolate Unclassified
160 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
161 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
162 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
163 2891562705 Microbispora tritici MT50 Isolate Unclassified
164 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
165 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
166 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
167 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
168 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
169 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
170 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
171 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
172 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
173 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
174 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
175 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
176 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
177 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
178 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
179 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
180 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 77.59
Metatranscriptomes 0.86
Isolates 21.55

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.74
Nodule 0
Rhizoplane 3.88
Rhizosphere 71.55
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070675_100005017 3300005354 Bacteria 10106
2 Ga0070673_100043124 3300005364 Bacteria 3483
3 Ga0070697_100003748 3300005536 Bacteria 11670
4 Ga0068853_100059426 3300005539 Bacteria 3303
5 Ga0068855_100006282 3300005563 Bacteria 14479
6 Ga0068855_100024677 3300005563 Bacteria 7191
7 Ga0068855_100041168 3300005563 Bacteria 5477
8 Ga0068856_100048547 3300005614 Bacteria 4184
9 Ga0075365_10017477 3300006038 Bacteria 4388
10 Ga0075364_10019069 3300006051 Bacteria 4303
11 Ga0075370_10016204 3300006353 Bacteria 4006
12 Ga0105245_10022415 3300009098 Bacteria 5544
13 Ga0105241_10012884 3300009174 Bacteria 6136
14 Ga0207692_10004302 3300025898 Bacteria 5630
15 Ga0207647_10008232 3300025904 Bacteria 7493
16 Ga0207647_10010694 3300025904 Bacteria 6465
17 Ga0207654_10038418 3300025911 Bacteria 2686
18 Ga0207695_10008693 3300025913 Bacteria 12665
19 Ga0207671_10000182 3300025914 Bacteria 96156
20 Ga0207659_10035547 3300025926 Bacteria 3445
21 Ga0207651_10008542 3300025960 Bacteria 5538
22 Ga0207658_10020407 3300025986 Bacteria 4589
23 Ga0307517_10025854 3300028786 Bacteria 7149
24 Ga0307515_10008750 3300028794 Bacteria 19671
25 Ga0307515_10026647 3300028794 Bacteria 9933
26 Ga0307515_10122239 3300028794 Bacteria 2938
27 Ga0307511_10002580 3300030521 Bacteria 18930
28 Ga0307512_10009900 3300030522 Bacteria 9142
29 Ga0307513_10000116 3300031456 Bacteria 111353
30 Ga0307513_10013712 3300031456 Bacteria 9939
31 Ga0307509_10004570 3300031507 Bacteria 19849
32 Ga0307509_10014847 3300031507 Bacteria 9130
33 Ga0307509_10023136 3300031507 Bacteria 6987
34 Ga0307508_10020579 3300031616 Bacteria 5992
35 Ga0316575_10000125 3300031665 Bacteria 19447
36 Ga0316576_10000754 3300031727 Bacteria 16132
37 Ga0316578_10001784 3300031728 Bacteria 9032
38 Ga0316577_10000861 3300031733 Bacteria 13275
39 Ga0307406_10001104 3300031901 Bacteria 15047
40 Ga0307409_100027809 3300031995 Bacteria 4016
41 Ga0316583_10000528 3300032133 Bacteria 11464
42 Ga0316585_10001864 3300032137 Bacteria 5631
43 Ga0316580_10000135 3300032139 Bacteria 14204
44 Ga0316593_10011357 3300032168 Bacteria 2585
45 Ga0307507_10003725 3300033179 Bacteria 28711
46 Ga0307507_10019028 3300033179 Bacteria 7765
47 Ga0307507_10094471 3300033179 Bacteria 2541
48 Ga0307510_10004499 3300033180 Bacteria 16395
49 Ga0307510_10073275 3300033180 Bacteria 3394
50 Ga0316596_1003286 3300033541 Bacteria 3524
51 Ga0373934_0008914 3300035086 Bacteria 3748
52 Ga0373944_0003435 3300035089 Bacteria 4088
53 Ga0373936_0008844 3300035113 Bacteria 3794
54 Ga0373945_0006536 3300035116 Bacteria 3766
55 Ga0373954_0006871 3300035118 Bacteria 4968
56 Ga0373954_0007692 3300035118 Bacteria 4716
57 Ga0373943_0009646 3300035170 Bacteria 4325
58 Ga0373955_0028146 3300035172 Bacteria 2911
59 Ga0373924_0002442 3300035410 Bacteria 6253
60 Ga0373927_0008177 3300035695 Bacteria 7049
61 Ga0316584_0000226 3300036712 Bacteria 27839
62 Ga0395898_0016073 3300037466 Bacteria 7668
63 Ga0316581_0000059 3300037588 Bacteria 13016
64 Ga0439457_000184 3300042014 Bacteria 16401
65 Ga0450894_001101 3300042131 Bacteria 4073
66 Ga0450903_000508 3300042138 Bacteria 8139
67 Ga0450906_000708 3300042145 Bacteria 7159
68 Ga0466969_0038716 3300044656 Bacteria 2398
69 Ga0495592_0001437 3300046454 Bacteria 16525
70 Ga0495603_0000018 3300046455 Bacteria 65755
71 Ga0495603_0001880 3300046455 Bacteria 12386
72 Ga0495603_0002126 3300046455 Bacteria 11650
73 Ga0495603_0004190 3300046455 Bacteria 8585
74 Ga0495629_0014800 3300046459 Bacteria 5611
75 Ga0495629_0028031 3300046459 Bacteria 3999
76 Ga0495641_0004064 3300046461 Bacteria 10591
77 Ga0495651_0001067 3300046462 Bacteria 21168
78 Ga0495651_0014526 3300046462 Bacteria 6087
79 Ga0495651_0014925 3300046462 Bacteria 6006
80 Ga0495653_0012057 3300046463 Bacteria 7053
81 Ga0495653_0025939 3300046463 Bacteria 4702
82 Ga0495580_0013265 3300046472 Bacteria 6297
83 Ga0495580_0033431 3300046472 Bacteria 3706
84 Ga0495582_0003907 3300046473 Bacteria 8365
85 Ga0495639_0015379 3300046475 Bacteria 3319
86 Ga0495662_0001809 3300046476 Bacteria 10712
87 Ga0495662_0007477 3300046476 Bacteria 5401
88 Ga0495594_0017679 3300046499 Bacteria 3769
89 Ga0495620_0002473 3300046515 Bacteria 10712
90 Ga0495628_0005873 3300046516 Bacteria 10748
91 Ga0495630_0025385 3300046517 Bacteria 4381
92 Ga0495643_0011120 3300046522 Bacteria 5502
93 Ga0495666_0001464 3300046526 Bacteria 11513
94 Ga0495666_0013955 3300046526 Bacteria 4006
95 Ga0495652_0031318 3300046529 Bacteria 4658
96 Ga0495665_0004961 3300046531 Bacteria 7170
97 Ga0495640_0012332 3300046533 Bacteria 6533
98 Ga0495640_0020366 3300046533 Bacteria 4882
99 Ga0495587_0001989 3300046536 Bacteria 13643
100 Ga0495645_0007909 3300046543 Bacteria 7398
101 Ga0495667_0006713 3300046559 Bacteria 7810
102 Ga0495667_0021001 3300046559 Bacteria 4404
103 Ga0495668_0008971 3300046616 Bacteria 6175
104 Ga0495668_0019936 3300046616 Bacteria 3858
105 Ga0495634_0000948 3300046642 Bacteria 27438
106 Ga0495634_0006679 3300046642 Bacteria 8743
107 Ga0495625_0005233 3300046660 Bacteria 11942
108 Ga0495635_0006936 3300046663 Bacteria 7912
109 Ga0495635_0014321 3300046663 Bacteria 5548
110 Ga0495635_0023222 3300046663 Bacteria 4322
111 Ga0495588_0002842 3300046674 Bacteria 7452
112 Ga0495657_0001737 3300046675 Bacteria 18655
113 Ga0495657_0008727 3300046675 Bacteria 7737
114 Ga0495599_0014548 3300046678 Bacteria 4872
115 Ga0495646_0002198 3300046680 Bacteria 11879
116 Ga0495646_0006052 3300046680 Bacteria 7671
117 Ga0495658_0009999 3300046683 Bacteria 4735
118 Ga0495613_0000794 3300046689 Bacteria 24570
119 Ga0495613_0003419 3300046689 Bacteria 11862
120 Ga0495613_0004811 3300046689 Bacteria 10132
121 Ga0495613_0009436 3300046689 Bacteria 7239
122 Ga0495613_0017636 3300046689 Bacteria 5316
123 Ga0495670_0008627 3300046691 Bacteria 5018
124 Ga0495600_0004938 3300046809 Bacteria 8009
125 Ga0495600_0023219 3300046809 Bacteria 3989
126 Ga0495660_0005515 3300046810 Bacteria 7583
127 Ga0495660_0007542 3300046810 Bacteria 6386
128 Ga0495581_0003522 3300047315 Bacteria 8979
129 Ga0495581_0007757 3300047315 Bacteria 6212
130 Ga0495604_0001893 3300047317 Bacteria 17001
131 Ga0495604_0004117 3300047317 Bacteria 11550
132 Ga0495604_0013789 3300047317 Bacteria 6444
133 Ga0495676_0000364 3300047321 Bacteria 37208
134 Ga0495676_0027486 3300047321 Bacteria 4875
135 Ga0495680_0012811 3300047322 Bacteria 7351
136 Ga0495683_0001104 3300047323 Bacteria 18634
137 Ga0495683_0007320 3300047323 Bacteria 5981
138 Ga0495687_004628 3300047443 Bacteria 9190
139 Ga0495675_0015847 3300047444 Bacteria 4767
140 Ga0495681_0000595 3300047470 Bacteria 27599
141 Ga0495684_0031439 3300047471 Bacteria 4075
142 Ga0495593_0000756 3300047673 Bacteria 18734
143 Ga0495593_0011039 3300047673 Bacteria 5200
144 Ga0495602_0031976 3300048088 Bacteria 4962
145 Ga0495614_0001683 3300048089 Bacteria 9652
146 Ga0495614_0016037 3300048089 Bacteria 3262
147 Ga0495614_0020924 3300048089 Bacteria 2827
148 Ga0496108_0000073 3300048911 Bacteria 112479
149 Ga0496108_0012457 3300048911 Bacteria 6923
150 Ga0496109_0001698 3300048912 Bacteria 18358
151 Ga0496109_0012195 3300048912 Bacteria 7415
152 Ga0496110_0002472 3300048913 Bacteria 13843
153 Ga0496111_0001573 3300048914 Bacteria 13183
154 Ga0496112_0117985 3300048915 Bacteria 2624
155 Ga0496114_0010044 3300048917 Bacteria 7526
156 Ga0496115_0085693 3300048918 Bacteria 2570
157 Ga0496125_0000120 3300048928 Bacteria 175991
158 Ga0496126_0039959 3300048929 Bacteria 4350
159 Ga0501031_0001043 3300049568 Bacteria 16812
160 Ga0501032_0010309 3300049569 Bacteria 6744
161 Ga0501033_0009900 3300049570 Bacteria 7319
162 Ga0501036_0004391 3300049572 Bacteria 11381
163 Ga0501037_0001816 3300049573 Bacteria 15513
164 Ga0501038_0000522 3300049574 Bacteria 33756
165 Ga0501039_0017378 3300049575 Bacteria 5517
166 Ga0501042_0015322 3300049578 Bacteria 5249
167 Ga0501046_0003603 3300049580 Bacteria 14186
168 Ga0501047_0051650 3300049581 Bacteria 3972
169 Ga0501048_0001039 3300049582 Bacteria 20788
170 Ga0501048_0039187 3300049582 Bacteria 3400
171 Ga0501069_0015195 3300049585 Bacteria 4126
172 nmdc:mga00v17_30096_c1 3300050491 Bacteria 3192
173 nmdc:mga0yw44_23877_c1 3300050492 Bacteria 3451
174 nmdc:mga07m45_34889_c1 3300050496 Bacteria 2797
175 nmdc:mga07m45_4704_c1 3300050496 Bacteria 6702
176 Ga0495601_0015381 3300053077 Bacteria 4625
177 Ga0495612_0012780 3300053078 Bacteria 3384
178 Ga0495619_0011777 3300053085 Bacteria 5508
179 Ga0500646_0000313 3300053090 Bacteria 14845
180 Ga0500650_0000328 3300053098 Bacteria 11421
181 Ga0500573_0046204 3300053140 Bacteria 2509
182 Ga0500600_0009462 3300053149 Bacteria 5879
183 2856744196 2856741275 Bacteria 8096094
184 2547412959 2547132111 Bacteria 8013147
185 2616699620 2616644814 Bacteria 11555299
186 2643948296 2643221587 Bacteria 7586415
187 2644265626 2643221647 Bacteria 10741251
188 2644388736 2643221670 Bacteria 6497041
189 2644429769 2643221677 Bacteria 7584031
190 2644440475 2643221678 Bacteria 9540101
191 2644506415 2643221690 Bacteria 4654705
192 2644627875 2643221714 Bacteria 9015452
193 2676487684 2675903060 Bacteria 10051191
194 2738693553 2738541272 Bacteria 6848551
195 2785346762 2784746763 Bacteria 9783172
196 2785373523 2784746768 Bacteria 10036182
197 2786667486 2786546132 Bacteria 10419719
198 2808845916 2808606359 Bacteria 9866990
199 2809027626 2808606394 Bacteria 6248540
200 2809235706 2808606448 Bacteria 8656184
201 2812361153 2811994879 Bacteria 9313447
202 2839989433 2839986021 Bacteria 3685650
203 2855389542 2855386786 Bacteria 4752232
204 2862179527 2862178590 Bacteria 8583590
205 2862297063 2862290372 Bacteria 7471434
206 2863407137 2863404153 Bacteria 9672205
207 2863410938 2863404153 Bacteria 9672205
208 2867437719 2867428634 Bacteria 9590268
209 2877676639 2877676314 Bacteria 9512378
210 2880502352 2880495981 Bacteria 7340502
211 2891401028 2891395885 Bacteria 9251614
212 2891568072 2891562705 Bacteria 8039471
213 2918504404 2918501144 Bacteria 8668083
214 2919470734 2919468124 Bacteria 9133025
215 2935392531 2935390628 Bacteria 7043367
216 2954673625 2954673503 Bacteria 9685905
217 2954690364 2954682443 Bacteria 9862841
218 2954692128 2954691527 Bacteria 10720516
219 2954700311 2954691527 Bacteria 10720516
220 2954701920 2954701450 Bacteria 10834262
221 2954707195 2954701450 Bacteria 10834262
222 2954711971 2954711539 Bacteria 10867210
223 2954720139 2954711539 Bacteria 10867210
224 2954721910 2954721474 Bacteria 10456478
225 2954739943 2954731030 Bacteria 10243860
226 2954740804 2954740390 Bacteria 10229294
227 2954758762 2954749733 Bacteria 10366972
228 2954759812 2954759201 Bacteria 9358192
229 3006322534 3006321560 Bacteria 8247479
230 3006489289 3006486233 Bacteria 8157040
231 8048410624 8048406513 Bacteria 8936924
232 8056831287 8056829672 Bacteria 9045328
233 Ga0070675_100005017
234 Ga0070673_100043124
235 Ga0070697_100003748
236 Ga0068853_100059426
237 Ga0068855_100006282
238 Ga0068855_100024677
239 Ga0068855_100041168
240 Ga0068856_100048547
241 Ga0075365_10017477
242 Ga0075364_10019069
243 Ga0075370_10016204
244 Ga0105245_10022415
245 Ga0105241_10012884
246 Ga0207692_10004302
247 Ga0207647_10008232
248 Ga0207647_10010694
249 Ga0207654_10038418
250 Ga0207695_10008693
251 Ga0207671_10000182
252 Ga0207659_10035547
253 Ga0207651_10008542
254 Ga0207658_10020407
255 Ga0307517_10025854
256 Ga0307515_10008750
257 Ga0307515_10026647
258 Ga0307515_10122239
259 Ga0307511_10002580
260 Ga0307512_10009900
261 Ga0307513_10000116
262 Ga0307513_10013712
263 Ga0307509_10004570
264 Ga0307509_10014847
265 Ga0307509_10023136
266 Ga0307508_10020579
267 Ga0316575_10000125
268 Ga0316576_10000754
269 Ga0316578_10001784
270 Ga0316577_10000861
271 Ga0307406_10001104
272 Ga0307409_100027809
273 Ga0316583_10000528
274 Ga0316585_10001864
275 Ga0316580_10000135
276 Ga0316593_10011357
277 Ga0307507_10003725
278 Ga0307507_10019028
279 Ga0307507_10094471
280 Ga0307510_10004499
281 Ga0307510_10073275
282 Ga0316596_1003286
283 Ga0373934_0008914
284 Ga0373944_0003435
285 Ga0373936_0008844
286 Ga0373945_0006536
287 Ga0373954_0006871
288 Ga0373954_0007692
289 Ga0373943_0009646
290 Ga0373955_0028146
291 Ga0373924_0002442
292 Ga0373927_0008177
293 Ga0316584_0000226
294 Ga0395898_0016073
295 Ga0316581_0000059
296 Ga0439457_000184
297 Ga0450894_001101
298 Ga0450903_000508
299 Ga0450906_000708
300 Ga0466969_0038716
301 Ga0495592_0001437
302 Ga0495603_0000018
303 Ga0495603_0001880
304 Ga0495603_0002126
305 Ga0495603_0004190
306 Ga0495629_0014800
307 Ga0495629_0028031
308 Ga0495641_0004064
309 Ga0495651_0001067
310 Ga0495651_0014526
311 Ga0495651_0014925
312 Ga0495653_0012057
313 Ga0495653_0025939
314 Ga0495580_0013265
315 Ga0495580_0033431
316 Ga0495582_0003907
317 Ga0495639_0015379
318 Ga0495662_0001809
319 Ga0495662_0007477
320 Ga0495594_0017679
321 Ga0495620_0002473
322 Ga0495628_0005873
323 Ga0495630_0025385
324 Ga0495643_0011120
325 Ga0495666_0001464
326 Ga0495666_0013955
327 Ga0495652_0031318
328 Ga0495665_0004961
329 Ga0495640_0012332
330 Ga0495640_0020366
331 Ga0495587_0001989
332 Ga0495645_0007909
333 Ga0495667_0006713
334 Ga0495667_0021001
335 Ga0495668_0008971
336 Ga0495668_0019936
337 Ga0495634_0000948
338 Ga0495634_0006679
339 Ga0495625_0005233
340 Ga0495635_0006936
341 Ga0495635_0014321
342 Ga0495635_0023222
343 Ga0495588_0002842
344 Ga0495657_0001737
345 Ga0495657_0008727
346 Ga0495599_0014548
347 Ga0495646_0002198
348 Ga0495646_0006052
349 Ga0495658_0009999
350 Ga0495613_0000794
351 Ga0495613_0003419
352 Ga0495613_0004811
353 Ga0495613_0009436
354 Ga0495613_0017636
355 Ga0495670_0008627
356 Ga0495600_0004938
357 Ga0495600_0023219
358 Ga0495660_0005515
359 Ga0495660_0007542
360 Ga0495581_0003522
361 Ga0495581_0007757
362 Ga0495604_0001893
363 Ga0495604_0004117
364 Ga0495604_0013789
365 Ga0495676_0000364
366 Ga0495676_0027486
367 Ga0495680_0012811
368 Ga0495683_0001104
369 Ga0495683_0007320
370 Ga0495687_004628
371 Ga0495675_0015847
372 Ga0495681_0000595
373 Ga0495684_0031439
374 Ga0495593_0000756
375 Ga0495593_0011039
376 Ga0495602_0031976
377 Ga0495614_0001683
378 Ga0495614_0016037
379 Ga0495614_0020924
380 Ga0496108_0000073
381 Ga0496108_0012457
382 Ga0496109_0001698
383 Ga0496109_0012195
384 Ga0496110_0002472
385 Ga0496111_0001573
386 Ga0496112_0117985
387 Ga0496114_0010044
388 Ga0496115_0085693
389 Ga0496125_0000120
390 Ga0496126_0039959
391 Ga0501031_0001043
392 Ga0501032_0010309
393 Ga0501033_0009900
394 Ga0501036_0004391
395 Ga0501037_0001816
396 Ga0501038_0000522
397 Ga0501039_0017378
398 Ga0501042_0015322
399 Ga0501046_0003603
400 Ga0501047_0051650
401 Ga0501048_0001039
402 Ga0501048_0039187
403 Ga0501069_0015195
404 nmdc:mga00v17_30096_c1
405 nmdc:mga0yw44_23877_c1
406 nmdc:mga07m45_34889_c1
407 nmdc:mga07m45_4704_c1
408 Ga0495601_0015381
409 Ga0495612_0012780
410 Ga0495619_0011777
411 Ga0500646_0000313
412 Ga0500650_0000328
413 Ga0500573_0046204
414 Ga0500600_0009462
415 2856744196
416 2547412959
417 2616699620
418 2643948296
419 2644265626
420 2644388736
421 2644429769
422 2644440475
423 2644506415
424 2644627875
425 2676487684
426 2738693553
427 2785346762
428 2785373523
429 2786667486
430 2808845916
431 2809027626
432 2809235706
433 2812361153
434 2839989433
435 2855389542
436 2862179527
437 2862297063
438 2863407137
439 2863410938
440 2867437719
441 2877676639
442 2880502352
443 2891401028
444 2891568072
445 2918504404
446 2919470734
447 2935392531
448 2954673625
449 2954690364
450 2954692128
451 2954700311
452 2954701920
453 2954707195
454 2954711971
455 2954720139
456 2954721910
457 2954739943
458 2954740804
459 2954758762
460 2954759812
461 3006322534
462 3006489289
463 8048410624
464 8056831287

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01228

Gly_radical

Glycine radical

649

755

0.98

PF02901

PFL-like

Pyruvate formate lyase-like

43

633

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
1cm5-assembly1.cif.gz_B crystal structure of c418a,c419a mutant of pfl from e.coli 0.9576 3 744
1h16-assembly1.cif.gz_A pyruvate formate-lyase (e.coli) in complex with pyruvate and coa 0.9558 3 742
1cm5-assembly1.cif.gz_B crystal structure of c418a,c419a mutant of pfl from e.coli 0.9502 3 744
1h16-assembly1.cif.gz_A pyruvate formate-lyase (e.coli) in complex with pyruvate and coa 0.9458 3 742
1qhm-assembly1.cif.gz_A escherichia coli pyruvate formate lyase large domain 0.9407 3 606
ID Description Score Start End Superfamily
1mzoB00 Alpha Beta;Alpha-Beta Barrel;Anaerobic Ribonucleotide-triphosphate Reductase Large Chain; 0.9576 3 742 3.20.70.20
1mzoB00 Alpha Beta;Alpha-Beta Barrel;Anaerobic Ribonucleotide-triphosphate Reductase Large Chain; 0.9476 3 742 3.20.70.20
1qhmA00 Alpha Beta;Alpha-Beta Barrel;Anaerobic Ribonucleotide-triphosphate Reductase Large Chain; 0.9407 3 606 3.20.70.20
1qhmA00 Alpha Beta;Alpha-Beta Barrel;Anaerobic Ribonucleotide-triphosphate Reductase Large Chain; 0.9273 3 606 3.20.70.20
4mtjA01 Alpha Beta;Alpha-Beta Barrel;Anaerobic Ribonucleotide-triphosphate Reductase Large Chain; 0.819 45 740 3.20.70.20
ID Description Score Start End GO Terms
AF-A0A2S6DA61-F1-model_v4 deleted 0.9915 503 597
AF-A0A377A974-F1-model_v4 Keto-acid formate acetyltransferase (EC 2.3.1.-) 0.9871 443 591 GO:0005829
GO:0008861
AF-A0A376TS05-F1-model_v4 Keto-acid formate acetyltransferase (EC 2.3.1.-) 0.9843 404 557 GO:0005829
GO:0008861
AF-A0A376X3L3-F1-model_v4 Formate acetyltransferase 1 (EC 2.3.1.54) 0.9824 387 621 GO:0005829
GO:0008861
AF-X0U472-F1-model_v4 PFL domain-containing protein 0.9819 393 553 GO:0005829
GO:0008861

Map