F345628
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 232 | 182 | 464 | 440 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2844852863|2844853688 |
| Length | 479 |
| Sequence | IDLRGTDTSGTDTSGTDTSGTTTAGGSPAVPEQGANAREFARAQRSIPGGVNSPVRAFRSVGGTPRFMVSAQGPYITDSEGREYVDLVCSWGPAVLGHAHPEVVKAVQDAAARGLSFGATTPPETDLAELVRARVTAGGVAPIEKLRLVSTGTEATMTAIRLARGFTGRDVLIKFAGHYHGHSDPLLAEAGSGLATLALPASAGVPAATAALTIVLPYNDLDAVRTAFEEFGQQIAAIIVEAAPANMGVVPPAPGFNAALAATAHEHGALLIVDEVLTGFRVGSAGWWGLENAPAPDGVVVHPYTPDLVTFGKVVGGGMPLAALGGRADVMDHLAPLGPVYQAGTLSGNPIAVAAGLSTLRLADAAVYEKLDAASLIISDAVSSAFAEAGVAHSLQRAGSLFSFTFGSDVAPRDYADVQRQEAFRYAPFFHSMLDAGVSLPPSVYEAWFVSAAHDDTAIGRIVDALPAAAQAAAAATPA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300002773 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS | Metagenome | Endosphere |
| 2 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 3 | 3300003578 | Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Unclassified |
| 4 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 5 | 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 7 | 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Metagenome | Rhizosphere |
| 8 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 10 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 11 | 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Metagenome | Rhizosphere |
| 12 | 3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Metagenome | Rhizosphere |
| 13 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 16 | 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Metagenome | Rhizosphere |
| 17 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 18 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 20 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 21 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 22 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 23 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 24 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 25 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 26 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 27 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 28 | 3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Metagenome | Rhizosphere |
| 29 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 30 | 3300005981 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Metagenome | Rhizosphere |
| 31 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 32 | 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Metagenome | Rhizosphere |
| 33 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 34 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 35 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 36 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 41 | 3300013250 | Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 | Metagenome | Rhizosphere |
| 42 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 43 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 44 | 3300025258 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) | Metagenome | Endosphere |
| 45 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 46 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 47 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 48 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 67 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 69 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 70 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 71 | 3300031239 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG | Metagenome | Rhizosphere |
| 72 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 73 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 74 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 75 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 76 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 77 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 78 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 79 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 80 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 81 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 82 | 3300035118 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 | Metagenome | Rhizosphere |
| 83 | 3300035170 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 | Metagenome | Rhizosphere |
| 84 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 85 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 86 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 87 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 88 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 89 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 90 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 91 | 3300041404 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 | Metagenome | Rhizosphere |
| 92 | 3300042002 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 | Metagenome | Rhizosphere |
| 93 | 3300042006 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 | Metagenome | Rhizosphere |
| 94 | 3300042016 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 | Metagenome | Rhizosphere |
| 95 | 3300042122 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 | Metagenome | Rhizosphere |
| 96 | 3300042146 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 | Metagenome | Rhizosphere |
| 97 | 3300042435 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 | Metagenome | Rhizosphere |
| 98 | 3300042531 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 | Metagenome | Rhizosphere |
| 99 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 100 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 101 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 102 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 103 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046535 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 111 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 112 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 113 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 114 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 115 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 116 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 117 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 118 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 119 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 120 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 121 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 122 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 123 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 124 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 125 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 126 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 127 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 128 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 129 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 130 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 131 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 132 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 133 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 134 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 135 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 136 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 137 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 138 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 139 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 140 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 141 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 142 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 143 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 144 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 145 | 3300053142 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere | Metagenome | Endosphere |
| 146 | 3300053148 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere | Metagenome | Endosphere |
| 147 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 148 | 3300053730 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere | Metagenome | Endosphere |
| 149 | 3300059423 | Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 | Metagenome | Rhizosphere |
| 150 | 2844852863 | Herbiconiux flava DSM 26474 | Isolate | Rhizosphere |
| 151 | 2585428094 | Herbiconiux sp. YR403 | Isolate | Rhizosphere |
| 152 | 2643221566 | Microbacterium sp. Root166 | Isolate | Unclassified |
| 153 | 2643221575 | Microbacterium sp. Root61 | Isolate | Unclassified |
| 154 | 2643221597 | Microbacterium sp. Root180 | Isolate | Unclassified |
| 155 | 2643221613 | Oerskovia sp. Root22 | Isolate | Unclassified |
| 156 | 2643221649 | Leifsonia sp. Root4 | Isolate | Unclassified |
| 157 | 2643221721 | Oerskovia sp. Root918 | Isolate | Unclassified |
| 158 | 2738541272 | Promicromonospora sp. AC04 | Isolate | Unclassified |
| 159 | 2738543027 | Promicromonospora sp. CF082 | Isolate | Unclassified |
| 160 | 2739367654 | Promicromonospora sp. YR516 | Isolate | Unclassified |
| 161 | 2758568522 | Promicromonospora thailandica SAI-039 | Isolate | Unclassified |
| 162 | 2758568621 | Promicromonospora sukumoe SAI-064 | Isolate | Unclassified |
| 163 | 2773857763 | Microbacterium sp. SAI-030 | Isolate | Unclassified |
| 164 | 2808606368 | Microbacterium sp. SLBN-1 | Isolate | Unclassified |
| 165 | 2808606394 | Promicromonospora sp. C35 | Isolate | Unclassified |
| 166 | 2818991472 | Kitasatospora viridis DSM 44826 | Isolate | Rhizosphere |
| 167 | 2833709550 | Microbacterium sp. 3290 | Isolate | Rhizosphere |
| 168 | 2839986021 | Cellulosimicrobium cellulans JZ5 | Isolate | Unclassified |
| 169 | 2870622029 | Conyzicola lurida DSM 105784 | Isolate | Unclassified |
| 170 | 2932431166 | Cellulosimicrobium sp. 4261 | Isolate | Rhizosphere |
| 171 | 2933418574 | Jeotgalibacillus campisalis 4120 | Isolate | Rhizosphere |
| 172 | 2935890801 | Oerskovia enterophila 3230 | Isolate | Rhizosphere |
| 173 | 2939647034 | Arthrobacter sp. 2762 | Isolate | Rhizosphere |
| 174 | 2939657138 | Conyzicola nivalis 2857 | Isolate | Rhizosphere |
| 175 | 2945916053 | Arthrobacter ulcerisalmonis W1I2 | Isolate | Rhizosphere |
| 176 | 2964326757 | Planctomonas psychrotolerans J5903 | Isolate | Rhizosphere |
| 177 | 2966921586 | Rathayibacter agropyri 617 | Isolate | Rhizosphere |
| 178 | 8045830549 | Microbacterium yannicii DSM 23203 | Isolate | Unclassified |
| 179 | 8054107350 | Arthrobacter rhizosphaerae CCNWLXL 1-35 | Isolate | Rhizosphere |
| 180 | 8056037122 | Herbiconiux gentiana CPCC 205716 | Isolate | Rhizosphere |
| 181 | 8056579771 | Promicromonospora iranensis UTMC 00792 | Isolate | Rhizosphere |
| 182 | 8057345674 | Herbiconiux aconitum CPCC 205763 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 84.91 |
| Metatranscriptomes | 0.86 |
| Isolates | 14.22 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 6.03 |
| Nodule | 0 |
| Rhizoplane | 4.74 |
| Rhizosphere | 76.29 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25152J39213_1001920 | 3300002773 | Bacteria | 8295 |
| 2 | rootL2_10205901 | 3300003322 | Bacteria | 3431 |
| 3 | Ga0006562J51391_1077877 | 3300003578 | Bacteria | 7690 |
| 4 | Ga0006562J51391_1077878 | 3300003578 | Bacteria | 3710 |
| 5 | Ga0055531_10000302 | 3300003794 | Bacteria | 48855 |
| 6 | Ga0070676_10096419 | 3300005328 | Bacteria | 1820 |
| 7 | Ga0070683_100006538 | 3300005329 | Bacteria | 9788 |
| 8 | Ga0070690_100057697 | 3300005330 | Bacteria | 2492 |
| 9 | Ga0070670_100022904 | 3300005331 | Bacteria | 5374 |
| 10 | Ga0068868_100045582 | 3300005338 | Bacteria | 3431 |
| 11 | Ga0070689_100132435 | 3300005340 | Bacteria | 2000 |
| 12 | Ga0070691_10040547 | 3300005341 | Bacteria | 2200 |
| 13 | Ga0070687_100016457 | 3300005343 | Bacteria | 3373 |
| 14 | Ga0070675_100091287 | 3300005354 | Bacteria | 2551 |
| 15 | Ga0070673_100003180 | 3300005364 | Bacteria | 10177 |
| 16 | Ga0070688_100040630 | 3300005365 | Bacteria | 2851 |
| 17 | Ga0070688_100061233 | 3300005365 | Bacteria | 2379 |
| 18 | Ga0070688_100159067 | 3300005365 | Bacteria | 1551 |
| 19 | Ga0070701_10016048 | 3300005438 | Bacteria | 3473 |
| 20 | Ga0070700_100024137 | 3300005441 | Bacteria | 3566 |
| 21 | Ga0070678_100138573 | 3300005456 | Bacteria | 1944 |
| 22 | Ga0070681_10050163 | 3300005458 | Bacteria | 4165 |
| 23 | Ga0070681_10053356 | 3300005458 | Bacteria | 4029 |
| 24 | Ga0070685_10022507 | 3300005466 | Bacteria | 3436 |
| 25 | Ga0070698_100001091 | 3300005471 | Bacteria | 29857 |
| 26 | Ga0070698_100101212 | 3300005471 | Bacteria | 2853 |
| 27 | Ga0070698_100151450 | 3300005471 | Bacteria | 2267 |
| 28 | Ga0070679_100018984 | 3300005530 | Bacteria | 6678 |
| 29 | Ga0070684_100024105 | 3300005535 | Bacteria | 5101 |
| 30 | Ga0070684_100034301 | 3300005535 | Bacteria | 4338 |
| 31 | Ga0070684_100218239 | 3300005535 | Bacteria | 1740 |
| 32 | Ga0070686_100032175 | 3300005544 | Bacteria | 3213 |
| 33 | Ga0070686_100033798 | 3300005544 | Bacteria | 3145 |
| 34 | Ga0068855_100078264 | 3300005563 | Bacteria | 3836 |
| 35 | Ga0068856_100048874 | 3300005614 | Bacteria | 4169 |
| 36 | Ga0068852_100059789 | 3300005616 | Bacteria | 3306 |
| 37 | Ga0068866_10034469 | 3300005718 | Bacteria | 2465 |
| 38 | Ga0081455_10078320 | 3300005937 | Bacteria | 2716 |
| 39 | Ga0081538_10011225 | 3300005981 | Bacteria | 7272 |
| 40 | Ga0081538_10014660 | 3300005981 | Bacteria | 6125 |
| 41 | Ga0081538_10020745 | 3300005981 | Bacteria | 4824 |
| 42 | Ga0081539_10010010 | 3300005985 | Bacteria | 7808 |
| 43 | Ga0070716_100048837 | 3300006173 | Bacteria | 2395 |
| 44 | Ga0075428_100090760 | 3300006844 | Bacteria | 3333 |
| 45 | Ga0075433_10026728 | 3300006852 | Bacteria | 4890 |
| 46 | Ga0068865_100109006 | 3300006881 | Bacteria | 2039 |
| 47 | Ga0111539_10047957 | 3300009094 | Bacteria | 5102 |
| 48 | Ga0105245_10218054 | 3300009098 | Bacteria | 1840 |
| 49 | Ga0114129_10013721 | 3300009147 | Bacteria | 11547 |
| 50 | Ga0114129_10023951 | 3300009147 | Bacteria | 8651 |
| 51 | Ga0105246_10011518 | 3300011119 | Bacteria | 5489 |
| 52 | Ga0105246_10022407 | 3300011119 | Bacteria | 4075 |
| 53 | Ga0157369_10145733 | 3300013105 | Bacteria | 2504 |
| 54 | Ga0171462_1004 | 3300013250 | Bacteria | 678877 |
| 55 | Ga0157374_10083812 | 3300013296 | Bacteria | 3029 |
| 56 | Ga0157375_10428210 | 3300013308 | Bacteria | 1489 |
| 57 | Ga0209129_1000176 | 3300025258 | Bacteria | 93584 |
| 58 | Ga0209025_1000840 | 3300025294 | Bacteria | 48702 |
| 59 | Ga0209051_1022769 | 3300025303 | Bacteria | 2627 |
| 60 | Ga0209257_1000005 | 3300025304 | Bacteria | 1592528 |
| 61 | Ga0207707_10026292 | 3300025912 | Bacteria | 5087 |
| 62 | Ga0207660_10038686 | 3300025917 | Bacteria | 3330 |
| 63 | Ga0207662_10005140 | 3300025918 | Bacteria | 6942 |
| 64 | Ga0207681_10120063 | 3300025923 | Bacteria | 1926 |
| 65 | Ga0207706_10030948 | 3300025933 | Bacteria | 4772 |
| 66 | Ga0207670_10011371 | 3300025936 | Bacteria | 5164 |
| 67 | Ga0207670_10116504 | 3300025936 | Bacteria | 1934 |
| 68 | Ga0207670_10136719 | 3300025936 | Bacteria | 1802 |
| 69 | Ga0207704_10104299 | 3300025938 | Bacteria | 1899 |
| 70 | Ga0207665_10071150 | 3300025939 | Bacteria | 2374 |
| 71 | Ga0207691_10155685 | 3300025940 | Bacteria | 2007 |
| 72 | Ga0207689_10080522 | 3300025942 | Bacteria | 2677 |
| 73 | Ga0207661_10036838 | 3300025944 | Bacteria | 3821 |
| 74 | Ga0207661_10294940 | 3300025944 | Bacteria | 1452 |
| 75 | Ga0207679_10153135 | 3300025945 | Bacteria | 1879 |
| 76 | Ga0207667_10071032 | 3300025949 | Bacteria | 3622 |
| 77 | Ga0207651_10007490 | 3300025960 | Bacteria | 5820 |
| 78 | Ga0207708_10036959 | 3300026075 | Bacteria | 3719 |
| 79 | Ga0207702_10263939 | 3300026078 | Bacteria | 1622 |
| 80 | Ga0207676_10105103 | 3300026095 | Bacteria | 2350 |
| 81 | Ga0207675_100014586 | 3300026118 | Bacteria | 7323 |
| 82 | Ga0207428_10002135 | 3300027907 | Bacteria | 19878 |
| 83 | Ga0268265_10129405 | 3300028380 | Bacteria | 2095 |
| 84 | Ga0307515_10073501 | 3300028794 | Bacteria | 4594 |
| 85 | Ga0265338_10073522 | 3300028800 | Bacteria | 2912 |
| 86 | Ga0265332_10036188 | 3300031238 | Bacteria | 2143 |
| 87 | Ga0265328_10000412 | 3300031239 | Bacteria | 20028 |
| 88 | Ga0265320_10002312 | 3300031240 | Bacteria | 13373 |
| 89 | Ga0265320_10018514 | 3300031240 | Bacteria | 3832 |
| 90 | Ga0265339_10004078 | 3300031249 | Bacteria | 10084 |
| 91 | Ga0265339_10011778 | 3300031249 | Bacteria | 5367 |
| 92 | Ga0265314_10025417 | 3300031711 | Bacteria | 4466 |
| 93 | Ga0265314_10029761 | 3300031711 | Bacteria | 4054 |
| 94 | Ga0265342_10001604 | 3300031712 | Bacteria | 20865 |
| 95 | Ga0265342_10003088 | 3300031712 | Bacteria | 13903 |
| 96 | Ga0307413_10009773 | 3300031824 | Bacteria | 4609 |
| 97 | Ga0307410_10060286 | 3300031852 | Bacteria | 2593 |
| 98 | Ga0307410_10099161 | 3300031852 | Bacteria | 2085 |
| 99 | Ga0307410_10151373 | 3300031852 | Bacteria | 1728 |
| 100 | Ga0307406_10000682 | 3300031901 | Bacteria | 19239 |
| 101 | Ga0307409_100002759 | 3300031995 | Bacteria | 9281 |
| 102 | Ga0307409_100027384 | 3300031995 | Bacteria | 4038 |
| 103 | Ga0307416_100116060 | 3300032002 | Bacteria | 2372 |
| 104 | Ga0307415_100000224 | 3300032126 | Bacteria | 24902 |
| 105 | Ga0373954_0001456 | 3300035118 | Bacteria | 9605 |
| 106 | Ga0373943_0005683 | 3300035170 | Bacteria | 5593 |
| 107 | Ga0373935_0134122 | 3300035692 | Bacteria | 1667 |
| 108 | Ga0373933_0020458 | 3300035724 | Bacteria | 3751 |
| 109 | Ga0373947_0019185 | 3300035725 | Bacteria | 3942 |
| 110 | Ga0373937_0000585 | 3300036401 | Bacteria | 32342 |
| 111 | Ga0373937_0016672 | 3300036401 | Bacteria | 6527 |
| 112 | Ga0373925_0042462 | 3300037068 | Bacteria | 3373 |
| 113 | Ga0373925_0121201 | 3300037068 | Bacteria | 2030 |
| 114 | Ga0395900_0005658 | 3300037418 | Bacteria | 13071 |
| 115 | Ga0395901_0091238 | 3300038443 | Bacteria | 3189 |
| 116 | Ga0395901_0256666 | 3300038443 | Bacteria | 1820 |
| 117 | Ga0439436_0025731 | 3300041404 | Bacteria | 1727 |
| 118 | Ga0439442_000001 | 3300042002 | Bacteria | 161142 |
| 119 | Ga0439442_000690 | 3300042002 | Bacteria | 7134 |
| 120 | Ga0439432_039314 | 3300042006 | Bacteria | 1504 |
| 121 | Ga0439463_014081 | 3300042016 | Bacteria | 1971 |
| 122 | Ga0450920_000830 | 3300042122 | Bacteria | 5002 |
| 123 | Ga0450920_010357 | 3300042122 | Bacteria | 1728 |
| 124 | Ga0450907_000572 | 3300042146 | Bacteria | 9922 |
| 125 | Ga0439434_0000694 | 3300042435 | Bacteria | 9709 |
| 126 | Ga0450918_000313 | 3300042531 | Bacteria | 10871 |
| 127 | Ga0466972_0032900 | 3300044658 | Bacteria | 2545 |
| 128 | Ga0453683_0000817 | 3300044673 | Bacteria | 30381 |
| 129 | Ga0466965_0089812 | 3300044683 | Bacteria | 1562 |
| 130 | Ga0466961_0089490 | 3300044693 | Bacteria | 1944 |
| 131 | Ga0495580_0001072 | 3300046472 | Bacteria | 24028 |
| 132 | Ga0495664_0108314 | 3300046477 | Bacteria | 1676 |
| 133 | Ga0495630_0007944 | 3300046517 | Bacteria | 7613 |
| 134 | Ga0495586_0051209 | 3300046535 | Bacteria | 2235 |
| 135 | Ga0495634_0021206 | 3300046642 | Bacteria | 4596 |
| 136 | Ga0495657_0070516 | 3300046675 | Bacteria | 2284 |
| 137 | Ga0495674_0001852 | 3300047319 | Bacteria | 20837 |
| 138 | Ga0496100_0022547 | 3300048903 | Bacteria | 3811 |
| 139 | Ga0496101_0030673 | 3300048904 | Bacteria | 3773 |
| 140 | Ga0496104_0041623 | 3300048907 | Bacteria | 4309 |
| 141 | Ga0496106_0133746 | 3300048909 | Bacteria | 1946 |
| 142 | Ga0496107_0013741 | 3300048910 | Bacteria | 5662 |
| 143 | Ga0496108_0035504 | 3300048911 | Bacteria | 4145 |
| 144 | Ga0496114_0000150 | 3300048917 | Bacteria | 50492 |
| 145 | Ga0496114_0006365 | 3300048917 | Bacteria | 9290 |
| 146 | Ga0496114_0021479 | 3300048917 | Bacteria | 5252 |
| 147 | Ga0496115_0020889 | 3300048918 | Bacteria | 5053 |
| 148 | Ga0496115_0177721 | 3300048918 | Bacteria | 1760 |
| 149 | Ga0496117_0000239 | 3300048920 | Bacteria | 104054 |
| 150 | Ga0496119_0004284 | 3300048922 | Bacteria | 14271 |
| 151 | Ga0496122_0000475 | 3300048925 | Bacteria | 83356 |
| 152 | Ga0496122_0000760 | 3300048925 | Bacteria | 62340 |
| 153 | Ga0496122_0008590 | 3300048925 | Bacteria | 10973 |
| 154 | Ga0496123_0001441 | 3300048926 | Bacteria | 33143 |
| 155 | Ga0496125_0000167 | 3300048928 | Bacteria | 147134 |
| 156 | Ga0496125_0006487 | 3300048928 | Bacteria | 12638 |
| 157 | Ga0496126_0216842 | 3300048929 | Bacteria | 1609 |
| 158 | Ga0501031_0004272 | 3300049568 | Bacteria | 9234 |
| 159 | Ga0501032_0025806 | 3300049569 | Bacteria | 4048 |
| 160 | Ga0501033_0009067 | 3300049570 | Bacteria | 7676 |
| 161 | Ga0501033_0016661 | 3300049570 | Bacteria | 5558 |
| 162 | Ga0501034_0007899 | 3300049571 | Bacteria | 11302 |
| 163 | Ga0501034_0133157 | 3300049571 | Bacteria | 2468 |
| 164 | Ga0501034_0243120 | 3300049571 | Bacteria | 1745 |
| 165 | Ga0501034_0327359 | 3300049571 | Bacteria | 1464 |
| 166 | Ga0501036_0058418 | 3300049572 | Bacteria | 3267 |
| 167 | Ga0501037_0003810 | 3300049573 | Bacteria | 10943 |
| 168 | Ga0501037_0102131 | 3300049573 | Bacteria | 2068 |
| 169 | Ga0501038_0248332 | 3300049574 | Bacteria | 1410 |
| 170 | Ga0501039_0052377 | 3300049575 | Bacteria | 3158 |
| 171 | Ga0501039_0082469 | 3300049575 | Bacteria | 2504 |
| 172 | Ga0501043_0071195 | 3300049579 | Bacteria | 2731 |
| 173 | Ga0501047_0012068 | 3300049581 | Bacteria | 8177 |
| 174 | Ga0501047_0064076 | 3300049581 | Bacteria | 3545 |
| 175 | Ga0501047_0092692 | 3300049581 | Bacteria | 2899 |
| 176 | Ga0501048_0001319 | 3300049582 | Bacteria | 18788 |
| 177 | Ga0501067_0012774 | 3300049583 | Bacteria | 4652 |
| 178 | Ga0501070_0005679 | 3300049586 | Bacteria | 10638 |
| 179 | Ga0501073_0031781 | 3300049589 | Bacteria | 3766 |
| 180 | Ga0501035_0036246 | 3300049822 | Bacteria | 4471 |
| 181 | Ga0501035_0087331 | 3300049822 | Bacteria | 2748 |
| 182 | Ga0501044_0044969 | 3300049823 | Bacteria | 4578 |
| 183 | Ga0501044_0050228 | 3300049823 | Bacteria | 4304 |
| 184 | Ga0501044_0091213 | 3300049823 | Bacteria | 3073 |
| 185 | nmdc:mga05p37_166702_c1 | 3300050507 | Bacteria | 2688 |
| 186 | nmdc:mga05p37_52384_c1 | 3300050507 | Bacteria | 5019 |
| 187 | nmdc:mga05p37_716_c1 | 3300050507 | Bacteria | 36551 |
| 188 | nmdc:mga08y16_12376_c1 | 3300050511 | Bacteria | 8972 |
| 189 | Ga0495601_0058982 | 3300053077 | Bacteria | 2433 |
| 190 | Ga0495595_0036485 | 3300053084 | Bacteria | 2231 |
| 191 | Ga0500573_0004051 | 3300053140 | Bacteria | 7664 |
| 192 | Ga0500573_0007602 | 3300053140 | Bacteria | 5921 |
| 193 | Ga0500573_0012926 | 3300053140 | Bacteria | 4694 |
| 194 | Ga0500577_0002471 | 3300053142 | Bacteria | 4725 |
| 195 | Ga0500577_0013312 | 3300053142 | Bacteria | 2509 |
| 196 | Ga0500590_081702 | 3300053148 | Bacteria | 1586 |
| 197 | Ga0500616_0000010 | 3300053153 | Bacteria | 761410 |
| 198 | Ga0500645_011842 | 3300053730 | Bacteria | 2834 |
| 199 | Ga0590074_007512 | 3300059423 | Bacteria | 1811 |
| 200 | 2844853688 | 2844852863 | Bacteria | 3849151 |
| 201 | 2587862106 | 2585428094 | Bacteria | 3604039 |
| 202 | 2643849102 | 2643221566 | Bacteria | 3460379 |
| 203 | 2643887955 | 2643221575 | Bacteria | 4022601 |
| 204 | 2643995290 | 2643221597 | Bacteria | 3347721 |
| 205 | 2644081245 | 2643221613 | Bacteria | 4622396 |
| 206 | 2644280084 | 2643221649 | Bacteria | 3867359 |
| 207 | 2644663445 | 2643221721 | Bacteria | 4486924 |
| 208 | 2738694540 | 2738541272 | Bacteria | 6848551 |
| 209 | 2739324015 | 2738543027 | Bacteria | 6409078 |
| 210 | 2739606897 | 2739367654 | Bacteria | 6049412 |
| 211 | 2760305222 | 2758568522 | Bacteria | 5953541 |
| 212 | 2760620966 | 2758568621 | Bacteria | 5967089 |
| 213 | 2774398819 | 2773857763 | Bacteria | 4180068 |
| 214 | 2808886100 | 2808606368 | Bacteria | 3174172 |
| 215 | 2809025759 | 2808606394 | Bacteria | 6248540 |
| 216 | 2819746950 | 2818991472 | Bacteria | 10089953 |
| 217 | 2833711591 | 2833709550 | Bacteria | 4008291 |
| 218 | 2839986581 | 2839986021 | Bacteria | 3685650 |
| 219 | 2870625259 | 2870622029 | Bacteria | 3643329 |
| 220 | 2932431605 | 2932431166 | Bacteria | 4215299 |
| 221 | 2933420759 | 2933418574 | Bacteria | 4476724 |
| 222 | 2935894583 | 2935890801 | Bacteria | 4593001 |
| 223 | 2939648822 | 2939647034 | Bacteria | 4681660 |
| 224 | 2939660031 | 2939657138 | Bacteria | 3740283 |
| 225 | 2945918254 | 2945916053 | Bacteria | 4555517 |
| 226 | 2964327810 | 2964326757 | Bacteria | 3290868 |
| 227 | 2966923020 | 2966921586 | Bacteria | 3092803 |
| 228 | 8045830605 | 8045830549 | Bacteria | 4444727 |
| 229 | 8054110996 | 8054107350 | Bacteria | 5022511 |
| 230 | 8056040485 | 8056037122 | Bacteria | 3854319 |
| 231 | 8056580151 | 8056579771 | Bacteria | 5840325 |
| 232 | 8057346680 | 8057345674 | Bacteria | 4160394 |
| 233 | JGI25152J39213_1001920 | |||
| 234 | rootL2_10205901 | |||
| 235 | Ga0006562J51391_1077877 | |||
| 236 | Ga0006562J51391_1077878 | |||
| 237 | Ga0055531_10000302 | |||
| 238 | Ga0070676_10096419 | |||
| 239 | Ga0070683_100006538 | |||
| 240 | Ga0070690_100057697 | |||
| 241 | Ga0070670_100022904 | |||
| 242 | Ga0068868_100045582 | |||
| 243 | Ga0070689_100132435 | |||
| 244 | Ga0070691_10040547 | |||
| 245 | Ga0070687_100016457 | |||
| 246 | Ga0070675_100091287 | |||
| 247 | Ga0070673_100003180 | |||
| 248 | Ga0070688_100040630 | |||
| 249 | Ga0070688_100061233 | |||
| 250 | Ga0070688_100159067 | |||
| 251 | Ga0070701_10016048 | |||
| 252 | Ga0070700_100024137 | |||
| 253 | Ga0070678_100138573 | |||
| 254 | Ga0070681_10050163 | |||
| 255 | Ga0070681_10053356 | |||
| 256 | Ga0070685_10022507 | |||
| 257 | Ga0070698_100001091 | |||
| 258 | Ga0070698_100101212 | |||
| 259 | Ga0070698_100151450 | |||
| 260 | Ga0070679_100018984 | |||
| 261 | Ga0070684_100024105 | |||
| 262 | Ga0070684_100034301 | |||
| 263 | Ga0070684_100218239 | |||
| 264 | Ga0070686_100032175 | |||
| 265 | Ga0070686_100033798 | |||
| 266 | Ga0068855_100078264 | |||
| 267 | Ga0068856_100048874 | |||
| 268 | Ga0068852_100059789 | |||
| 269 | Ga0068866_10034469 | |||
| 270 | Ga0081455_10078320 | |||
| 271 | Ga0081538_10011225 | |||
| 272 | Ga0081538_10014660 | |||
| 273 | Ga0081538_10020745 | |||
| 274 | Ga0081539_10010010 | |||
| 275 | Ga0070716_100048837 | |||
| 276 | Ga0075428_100090760 | |||
| 277 | Ga0075433_10026728 | |||
| 278 | Ga0068865_100109006 | |||
| 279 | Ga0111539_10047957 | |||
| 280 | Ga0105245_10218054 | |||
| 281 | Ga0114129_10013721 | |||
| 282 | Ga0114129_10023951 | |||
| 283 | Ga0105246_10011518 | |||
| 284 | Ga0105246_10022407 | |||
| 285 | Ga0157369_10145733 | |||
| 286 | Ga0171462_1004 | |||
| 287 | Ga0157374_10083812 | |||
| 288 | Ga0157375_10428210 | |||
| 289 | Ga0209129_1000176 | |||
| 290 | Ga0209025_1000840 | |||
| 291 | Ga0209051_1022769 | |||
| 292 | Ga0209257_1000005 | |||
| 293 | Ga0207707_10026292 | |||
| 294 | Ga0207660_10038686 | |||
| 295 | Ga0207662_10005140 | |||
| 296 | Ga0207681_10120063 | |||
| 297 | Ga0207706_10030948 | |||
| 298 | Ga0207670_10011371 | |||
| 299 | Ga0207670_10116504 | |||
| 300 | Ga0207670_10136719 | |||
| 301 | Ga0207704_10104299 | |||
| 302 | Ga0207665_10071150 | |||
| 303 | Ga0207691_10155685 | |||
| 304 | Ga0207689_10080522 | |||
| 305 | Ga0207661_10036838 | |||
| 306 | Ga0207661_10294940 | |||
| 307 | Ga0207679_10153135 | |||
| 308 | Ga0207667_10071032 | |||
| 309 | Ga0207651_10007490 | |||
| 310 | Ga0207708_10036959 | |||
| 311 | Ga0207702_10263939 | |||
| 312 | Ga0207676_10105103 | |||
| 313 | Ga0207675_100014586 | |||
| 314 | Ga0207428_10002135 | |||
| 315 | Ga0268265_10129405 | |||
| 316 | Ga0307515_10073501 | |||
| 317 | Ga0265338_10073522 | |||
| 318 | Ga0265332_10036188 | |||
| 319 | Ga0265328_10000412 | |||
| 320 | Ga0265320_10002312 | |||
| 321 | Ga0265320_10018514 | |||
| 322 | Ga0265339_10004078 | |||
| 323 | Ga0265339_10011778 | |||
| 324 | Ga0265314_10025417 | |||
| 325 | Ga0265314_10029761 | |||
| 326 | Ga0265342_10001604 | |||
| 327 | Ga0265342_10003088 | |||
| 328 | Ga0307413_10009773 | |||
| 329 | Ga0307410_10060286 | |||
| 330 | Ga0307410_10099161 | |||
| 331 | Ga0307410_10151373 | |||
| 332 | Ga0307406_10000682 | |||
| 333 | Ga0307409_100002759 | |||
| 334 | Ga0307409_100027384 | |||
| 335 | Ga0307416_100116060 | |||
| 336 | Ga0307415_100000224 | |||
| 337 | Ga0373954_0001456 | |||
| 338 | Ga0373943_0005683 | |||
| 339 | Ga0373935_0134122 | |||
| 340 | Ga0373933_0020458 | |||
| 341 | Ga0373947_0019185 | |||
| 342 | Ga0373937_0000585 | |||
| 343 | Ga0373937_0016672 | |||
| 344 | Ga0373925_0042462 | |||
| 345 | Ga0373925_0121201 | |||
| 346 | Ga0395900_0005658 | |||
| 347 | Ga0395901_0091238 | |||
| 348 | Ga0395901_0256666 | |||
| 349 | Ga0439436_0025731 | |||
| 350 | Ga0439442_000001 | |||
| 351 | Ga0439442_000690 | |||
| 352 | Ga0439432_039314 | |||
| 353 | Ga0439463_014081 | |||
| 354 | Ga0450920_000830 | |||
| 355 | Ga0450920_010357 | |||
| 356 | Ga0450907_000572 | |||
| 357 | Ga0439434_0000694 | |||
| 358 | Ga0450918_000313 | |||
| 359 | Ga0466972_0032900 | |||
| 360 | Ga0453683_0000817 | |||
| 361 | Ga0466965_0089812 | |||
| 362 | Ga0466961_0089490 | |||
| 363 | Ga0495580_0001072 | |||
| 364 | Ga0495664_0108314 | |||
| 365 | Ga0495630_0007944 | |||
| 366 | Ga0495586_0051209 | |||
| 367 | Ga0495634_0021206 | |||
| 368 | Ga0495657_0070516 | |||
| 369 | Ga0495674_0001852 | |||
| 370 | Ga0496100_0022547 | |||
| 371 | Ga0496101_0030673 | |||
| 372 | Ga0496104_0041623 | |||
| 373 | Ga0496106_0133746 | |||
| 374 | Ga0496107_0013741 | |||
| 375 | Ga0496108_0035504 | |||
| 376 | Ga0496114_0000150 | |||
| 377 | Ga0496114_0006365 | |||
| 378 | Ga0496114_0021479 | |||
| 379 | Ga0496115_0020889 | |||
| 380 | Ga0496115_0177721 | |||
| 381 | Ga0496117_0000239 | |||
| 382 | Ga0496119_0004284 | |||
| 383 | Ga0496122_0000475 | |||
| 384 | Ga0496122_0000760 | |||
| 385 | Ga0496122_0008590 | |||
| 386 | Ga0496123_0001441 | |||
| 387 | Ga0496125_0000167 | |||
| 388 | Ga0496125_0006487 | |||
| 389 | Ga0496126_0216842 | |||
| 390 | Ga0501031_0004272 | |||
| 391 | Ga0501032_0025806 | |||
| 392 | Ga0501033_0009067 | |||
| 393 | Ga0501033_0016661 | |||
| 394 | Ga0501034_0007899 | |||
| 395 | Ga0501034_0133157 | |||
| 396 | Ga0501034_0243120 | |||
| 397 | Ga0501034_0327359 | |||
| 398 | Ga0501036_0058418 | |||
| 399 | Ga0501037_0003810 | |||
| 400 | Ga0501037_0102131 | |||
| 401 | Ga0501038_0248332 | |||
| 402 | Ga0501039_0052377 | |||
| 403 | Ga0501039_0082469 | |||
| 404 | Ga0501043_0071195 | |||
| 405 | Ga0501047_0012068 | |||
| 406 | Ga0501047_0064076 | |||
| 407 | Ga0501047_0092692 | |||
| 408 | Ga0501048_0001319 | |||
| 409 | Ga0501067_0012774 | |||
| 410 | Ga0501070_0005679 | |||
| 411 | Ga0501073_0031781 | |||
| 412 | Ga0501035_0036246 | |||
| 413 | Ga0501035_0087331 | |||
| 414 | Ga0501044_0044969 | |||
| 415 | Ga0501044_0050228 | |||
| 416 | Ga0501044_0091213 | |||
| 417 | nmdc:mga05p37_166702_c1 | |||
| 418 | nmdc:mga05p37_52384_c1 | |||
| 419 | nmdc:mga05p37_716_c1 | |||
| 420 | nmdc:mga08y16_12376_c1 | |||
| 421 | Ga0495601_0058982 | |||
| 422 | Ga0495595_0036485 | |||
| 423 | Ga0500573_0004051 | |||
| 424 | Ga0500573_0007602 | |||
| 425 | Ga0500573_0012926 | |||
| 426 | Ga0500577_0002471 | |||
| 427 | Ga0500577_0013312 | |||
| 428 | Ga0500590_081702 | |||
| 429 | Ga0500616_0000010 | |||
| 430 | Ga0500645_011842 | |||
| 431 | Ga0590074_007512 | |||
| 432 | 2844853688 | |||
| 433 | 2587862106 | |||
| 434 | 2643849102 | |||
| 435 | 2643887955 | |||
| 436 | 2643995290 | |||
| 437 | 2644081245 | |||
| 438 | 2644280084 | |||
| 439 | 2644663445 | |||
| 440 | 2738694540 | |||
| 441 | 2739324015 | |||
| 442 | 2739606897 | |||
| 443 | 2760305222 | |||
| 444 | 2760620966 | |||
| 445 | 2774398819 | |||
| 446 | 2808886100 | |||
| 447 | 2809025759 | |||
| 448 | 2819746950 | |||
| 449 | 2833711591 | |||
| 450 | 2839986581 | |||
| 451 | 2870625259 | |||
| 452 | 2932431605 | |||
| 453 | 2933420759 | |||
| 454 | 2935894583 | |||
| 455 | 2939648822 | |||
| 456 | 2939660031 | |||
| 457 | 2945918254 | |||
| 458 | 2964327810 | |||
| 459 | 2966923020 | |||
| 460 | 8045830605 | |||
| 461 | 8054110996 | |||
| 462 | 8056040485 | |||
| 463 | 8056580151 | |||
| 464 | 8057346680 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2hp1-assembly1.cif.gz_A | inter-subunit signaling in gsam | 0.9746 | 3 | 430 |
| 4e77-assembly1.cif.gz_A-2 | 2.0a crystal structure of a glutamate-1-semialdehyde aminotransferase from yersinia pestis co92 | 0.9746 | 1 | 429 |
| 2hoy-assembly1.cif.gz_A | inter-subunit signaling in gsam | 0.9734 | 3 | 429 |
| 3fq8-assembly1.cif.gz_B | m248i mutant of gsam | 0.9731 | 3 | 430 |
| 3fqa-assembly1.cif.gz_B | gabaculien complex of gabaculine resistant gsam version | 0.9728 | 3 | 429 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 2gsaA02 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9677 | 69 | 320 | 3.40.640.10 |
| 4e77A02 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.963 | 69 | 320 | 3.40.640.10 |
| 2gsaA02 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9563 | 69 | 320 | 3.40.640.10 |
| 4e77A02 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9501 | 69 | 320 | 3.40.640.10 |
| af_Q58020_48_419_3.40.640.10 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9475 | 47 | 424 | 3.40.640.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A813BXZ7-F1-model_v4 | glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8) | 0.9819 | 6 | 430 |
GO:0005247
GO:0006782 GO:0008483 GO:0016020 GO:0030170 GO:0042286 |
| AF-A0A7K2NRA2-F1-model_v4 | Aminotransferase class III-fold pyridoxal phosphate-dependent enzyme | 0.981 | 179 | 436 |
GO:0008483
GO:0030170 |
| AF-A0A2X3HJA9-F1-model_v4 | Glutamate-1-semialdehyde 2,1-aminomutase (Glutamate-1-semialdehyde aminotransferase) | 0.9797 | 1 | 142 |
GO:0008483
GO:0030170 GO:0042286 |
| AF-A0A6L3X6E4-F1-model_v4 | Glutamate-1-semialdehyde 2,1-aminomutase (Glutamate-1-semialdehyde aminotransferase) | 0.9788 | 1 | 150 |
GO:0008483
GO:0030170 |
| AF-W7SXH3-F1-model_v4 | Glutamate-1-semialdehyde 2,1-aminomutase | 0.978 | 165 | 436 |
GO:0008483
GO:0030170 |