F345582

General Info

Members Datasets Scaffolds Average Seq Length
232 151 464 381

Family's Representative Sequence

Representative Sequence 3300053133|Ga0500655_001865|Ga0500655_001865_1830_3170
Length 446
Sequence MVLIILYTLAQAAAHGARHAQKNPYDLNASLPSSLFWARRPARRHAAAFRQPLSMAAGKRIRLWFLVHKWTSLVCTVFMLLLCITGLPLIFTHEIDDLLSGDPPYAELPANAPRANLDRIIEASRARYPAEAMRFIFIDDEEPQVVVTMSPSTDSDPKHNHSLKFDARTSKLISEKPPEAQSMTFMGLMLRLHIDLFAGLAGELFLGFMGLLLVIAIASGVVLYGPFMKKLDFGTVREGRSARLKWLDLHNLLGIATLAWAFVVGLTGVINELSTPLFQYWQSQTLPTLLAPYQGKTMPPQSETASVQGAYESVRRAMPDSVTVSVVYPTEKFGSPQHFIFWNKGNTPLTSRLFTPALLDARSGAVAAIPEPPWYLKALEVSRPLHFGDYAGTPLKILWAVLDVITIIVLGSGLYLWIARRKQTGERLAQLERRHEQLAGAAARAS

Samples

Sample ID Description Type Environment
1 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
4 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
5 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
6 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
7 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
15 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
16 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
17 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
18 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
19 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
20 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
21 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
22 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
23 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
24 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
25 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
26 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
27 3300009978 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_199 metaG Metagenome Rhizosphere
28 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
29 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
30 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
31 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
32 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
33 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
34 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
35 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
36 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
50 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
51 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
52 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
53 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
54 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
55 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
56 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
57 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
58 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
59 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
60 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
61 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
62 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
63 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
64 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
65 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
66 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
67 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
68 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
69 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
70 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
71 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
72 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
73 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
74 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
75 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
76 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
77 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
78 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
79 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
80 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
81 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
82 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
83 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
84 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
85 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
99 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
100 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
101 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
102 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
103 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
104 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
105 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
107 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
108 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
109 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
110 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
111 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
112 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
113 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
114 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
115 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
116 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
117 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
118 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
119 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
120 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
121 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
122 3300053736 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 endosphere Metagenome Endosphere
123 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
124 2501025502 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
125 2510917013 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
126 2554235132 Pseudomonas aeruginosa PGPR2 Isolate Unclassified
127 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
128 2599185292 Achromobacter sp. NFACC18-2 Isolate Rhizoplane
129 2606217733 Pseudomonas aeruginosa NFHH01 Isolate Rhizoplane
130 2643221563 Sphingopyxis sp. Root154 Isolate Unclassified
131 2643221569 Achromobacter sp. Root565 Isolate Unclassified
132 2643221594 Achromobacter sp. Root170 Isolate Unclassified
133 2643221608 Sphingopyxis sp. Root214 Isolate Unclassified
134 2643221621 Achromobacter sp. Root83 Isolate Unclassified
135 2808606395 Achromobacter sp. SLBN-14 Isolate Unclassified
136 2834641062 Cupriavidus gilardii JZ4 Isolate Unclassified
137 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
138 2848858292 Azospirillum brasilense Az39 Isolate Unclassified
139 2855730933 Achromobacter sp. HZ28 Isolate Nodule
140 2855767633 Achromobacter sp. HZ34 Isolate Nodule
141 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
142 2857537821 Achromobacter sp. R-71975 Isolate Unclassified
143 2857542790 Achromobacter sp. R-72367 Isolate Unclassified
144 2858950400 Achromobacter sp. K91 Isolate Unclassified
145 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified
146 2894414249 Luteimonas sp. LNNU 24178 Isolate Rhizosphere
147 2897803580 Azospirillum doebereinerae GSF71 Isolate Unclassified
148 2941479691
149 8003400568 Cupriavidus gilardii USM5 Isolate Rhizosphere
150 8054002106 Azospirillum lipoferum 59b Isolate Unclassified
151 8056689827 Bradyrhizobium semiaridum WSM 1704 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 87.93
Metatranscriptomes 0
Isolates 12.07

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.95
Nodule 1.29
Rhizoplane 1.72
Rhizosphere 49.14
Stem 0
Stem Tuber 0
Unclassified 2.16

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500655_001865 3300053133 Bacteria 3922
2 JGI25151J46595_10000170 3300003187 Bacteria 84454
3 JGI25153J46596_10003895 3300003215 Bacteria 8198
4 Ga0055539_1001117 3300003752 Bacteria 5551
5 Ga0055543_1001239 3300004625 Bacteria 10631
6 Ga0065165_1000611 3300005262 Bacteria 51919
7 Ga0065165_1001816 3300005262 Bacteria 20919
8 Ga0065704_10070144 3300005289 Bacteria 333223
9 Ga0070670_100060425 3300005331 Bacteria 3254
10 Ga0070668_100000837 3300005347 Bacteria 21267
11 Ga0070669_100002139 3300005353 Bacteria 14289
12 Ga0070669_100116121 3300005353 Bacteria 2036
13 Ga0070671_100043421 3300005355 Bacteria 3735
14 Ga0070667_100001768 3300005367 Bacteria 19242
15 Ga0070667_100012967 3300005367 Bacteria 6893
16 Ga0070707_100227270 3300005468 Bacteria 1817
17 Ga0070665_100003425 3300005548 Bacteria 16941
18 Ga0070665_100084252 3300005548 Bacteria 3184
19 Ga0070665_100285880 3300005548 Unclassified 1651
20 Ga0068857_100045404 3300005577 Bacteria 3898
21 Ga0068863_100139205 3300005841 Bacteria 2319
22 Ga0068858_100321926 3300005842 Bacteria 1478
23 Ga0068860_100004522 3300005843 Bacteria 14193
24 Ga0068860_100047510 3300005843 Bacteria 4091
25 Ga0068862_100011117 3300005844 Bacteria 7434
26 Ga0081540_1015257 3300005983 Bacteria 4871
27 Ga0075369_10009461 3300006186 Bacteria 3787
28 Ga0075366_10007141 3300006195 Bacteria 6151
29 Ga0075366_10075205 3300006195 Bacteria 2015
30 Ga0099794_10021457 3300007265 Bacteria 2934
31 Ga0099795_10036462 3300007788 Bacteria 1726
32 Ga0105251_10001494 3300009011 Bacteria 20088
33 Ga0105251_10010227 3300009011 Bacteria 5461
34 Ga0105248_10003246 3300009177 Bacteria 18031
35 Ga0105248_10006734 3300009177 Bacteria 12600
36 Ga0105148_100158 3300009978 Bacteria 10046
37 Ga0157371_10027035 3300013102 Bacteria 4164
38 Ga0209677_100354 3300025253 Bacteria 28586
39 Ga0209233_1005616 3300025261 Bacteria 4145
40 Ga0209675_1002317 3300025291 Bacteria 9852
41 Ga0209025_1000071 3300025294 Bacteria 287297
42 Ga0209758_1002566 3300025297 Bacteria 18260
43 Ga0209758_1026579 3300025297 Bacteria 2500
44 Ga0209050_1013714 3300025298 Bacteria 3569
45 Ga0207426_1001670 3300025302 Bacteria 17181
46 Ga0207713_1002634 3300025735 Bacteria 12900
47 Ga0207713_1006384 3300025735 Bacteria 7190
48 Ga0207681_10000907 3300025923 Bacteria 19321
49 Ga0207650_10185203 3300025925 Bacteria 1661
50 Ga0207644_10015770 3300025931 Bacteria 5079
51 Ga0207711_10002461 3300025941 Bacteria 16524
52 Ga0207711_10003945 3300025941 Bacteria 12763
53 Ga0207668_10000581 3300025972 Bacteria 22872
54 Ga0207658_10001316 3300025986 Bacteria 19476
55 Ga0207658_10011212 3300025986 Bacteria 6106
56 Ga0207703_10048575 3300026035 Bacteria 3426
57 Ga0207641_10267617 3300026088 Bacteria 1602
58 Ga0207674_10029363 3300026116 Bacteria 5788
59 Ga0268266_10003737 3300028379 Bacteria 14966
60 Ga0268266_10063024 3300028379 Bacteria 3200
61 Ga0268266_10110157 3300028379 Unclassified 2439
62 Ga0268265_10031488 3300028380 Bacteria 3830
63 Ga0268264_10000853 3300028381 Bacteria 32524
64 Ga0268264_10005290 3300028381 Bacteria 10931
65 Ga0268264_10008811 3300028381 Bacteria 8368
66 Ga0307511_10000102 3300030521 Bacteria 75242
67 Ga0314311_1060158 3300030733 Bacteria 2782
68 Ga0307408_100001003 3300031548 Bacteria 21784
69 Ga0307405_10001460 3300031731 Bacteria 9957
70 Ga0307405_10003035 3300031731 Bacteria 7604
71 Ga0307406_10003352 3300031901 Bacteria 8726
72 Ga0307412_10000229 3300031911 Bacteria 37619
73 Ga0307412_10002410 3300031911 Bacteria 10394
74 Ga0307416_100004164 3300032002 Bacteria 8665
75 Ga0307510_10000119 3300033180 Bacteria 62835
76 Ga0307510_10016609 3300033180 Bacteria 8687
77 Ga0307510_10038371 3300033180 Bacteria 5297
78 Ga0373939_0000046 3300035114 Bacteria 43854
79 Ga0373931_0000162 3300035691 Bacteria 29178
80 Ga0439436_0020858 3300041404 Bacteria 1950
81 Ga0466957_0015922 3300044842 Bacteria 4395
82 Ga0495585_0000117 3300046492 Bacteria 85886
83 Ga0495607_0017851 3300046501 Bacteria 4541
84 Ga0495610_0001318 3300046512 Bacteria 22046
85 Ga0495610_0023512 3300046512 Bacteria 3348
86 Ga0495631_0000729 3300046518 Bacteria 21149
87 Ga0495637_0003614 3300046520 Bacteria 8190
88 Ga0495625_0092488 3300046660 Bacteria 2090
89 Ga0495671_0133559 3300046692 Unclassified 1210
90 Ga0495660_0002478 3300046810 Bacteria 11772
91 Ga0495672_0018314 3300047320 Bacteria 4654
92 Ga0495686_0000084 3300047472 Bacteria 198253
93 Ga0495686_0028919 3300047472 Bacteria 3608
94 Ga0495686_0114640 3300047472 Bacteria 1613
95 Ga0495615_0000129 3300048090 Bacteria 19006
96 Ga0496103_0001978 3300048906 Bacteria 13252
97 Ga0496108_0008117 3300048911 Bacteria 8514
98 Ga0496116_0001498 3300048919 Bacteria 26006
99 Ga0496116_0002682 3300048919 Bacteria 18392
100 Ga0496116_0022546 3300048919 Bacteria 4716
101 Ga0496116_0044041 3300048919 Bacteria 3035
102 Ga0496117_0002895 3300048920 Bacteria 20774
103 Ga0496117_0011672 3300048920 Bacteria 7845
104 Ga0496117_0019078 3300048920 Bacteria 5650
105 Ga0496117_0029496 3300048920 Unclassified 4228
106 Ga0496118_0010391 3300048921 Bacteria 9226
107 Ga0496118_0014049 3300048921 Bacteria 7518
108 Ga0496118_0015556 3300048921 Bacteria 7037
109 Ga0496118_0025914 3300048921 Bacteria 5012
110 Ga0496118_0038298 3300048921 Bacteria 3845
111 Ga0496118_0054710 3300048921 Bacteria 3020
112 Ga0496118_0143274 3300048921 Bacteria 1510
113 Ga0496119_0011807 3300048922 Bacteria 7176
114 Ga0496119_0022857 3300048922 Bacteria 4457
115 Ga0496119_0031747 3300048922 Bacteria 3533
116 Ga0496119_0082012 3300048922 Bacteria 1855
117 Ga0496120_0003235 3300048923 Bacteria 15102
118 Ga0496120_0048708 3300048923 Bacteria 2437
119 Ga0496121_0000293 3300048924 Bacteria 103372
120 Ga0496121_0000848 3300048924 Bacteria 55357
121 Ga0496121_0001717 3300048924 Bacteria 35824
122 Ga0496121_0002130 3300048924 Bacteria 31106
123 Ga0496121_0004236 3300048924 Bacteria 19526
124 Ga0496121_0004932 3300048924 Bacteria 17503
125 Ga0496121_0005818 3300048924 Bacteria 15634
126 Ga0496121_0026631 3300048924 Bacteria 5439
127 Ga0496121_0057506 3300048924 Bacteria 3223
128 Ga0496122_0000165 3300048925 Bacteria 157612
129 Ga0496122_0000383 3300048925 Bacteria 94797
130 Ga0496122_0001014 3300048925 Bacteria 49714
131 Ga0496122_0001620 3300048925 Bacteria 35178
132 Ga0496122_0055230 3300048925 Bacteria 2974
133 Ga0496123_0000212 3300048926 Bacteria 118628
134 Ga0496123_0000249 3300048926 Bacteria 108969
135 Ga0496123_0000471 3300048926 Bacteria 70580
136 Ga0496123_0001243 3300048926 Bacteria 36926
137 Ga0496123_0026683 3300048926 Bacteria 4320
138 Ga0496123_0030561 3300048926 Bacteria 3941
139 Ga0496124_0000004 3300048927 Bacteria 976131
140 Ga0496124_0004255 3300048927 Bacteria 16850
141 Ga0496124_0047817 3300048927 Bacteria 3657
142 Ga0496124_0066346 3300048927 Bacteria 3005
143 Ga0496125_0000042 3300048928 Bacteria 303305
144 Ga0496125_0030880 3300048928 Bacteria 4784
145 Ga0496126_0003911 3300048929 Bacteria 18285
146 Ga0496126_0009492 3300048929 Bacteria 10322
147 Ga0496126_0089342 3300048929 Bacteria 2712
148 Ga0496126_0173032 3300048929 Bacteria 1838
149 Ga0501031_0075265 3300049568 Unclassified 2198
150 Ga0501032_0005347 3300049569 Bacteria 9553
151 Ga0501032_0015592 3300049569 Bacteria 5360
152 Ga0501033_0022681 3300049570 Bacteria 4734
153 Ga0501033_0039874 3300049570 Bacteria 3507
154 Ga0501033_0174251 3300049570 Bacteria 1544
155 Ga0501034_0005122 3300049571 Bacteria 14377
156 Ga0501034_0079586 3300049571 Bacteria 3281
157 Ga0501034_0201268 3300049571 Bacteria 1949
158 Ga0501036_0010912 3300049572 Bacteria 7511
159 Ga0501037_0008289 3300049573 Bacteria 7619
160 Ga0501038_0000744 3300049574 Bacteria 29055
161 Ga0501039_0004340 3300049575 Bacteria 10692
162 Ga0501042_0016703 3300049578 Bacteria 5045
163 Ga0501043_0060361 3300049579 Bacteria 2976
164 Ga0501046_0012437 3300049580 Bacteria 7246
165 Ga0501047_0071336 3300049581 Bacteria 3343
166 Ga0501047_0118996 3300049581 Bacteria 2523
167 Ga0501047_0153729 3300049581 Bacteria 2175
168 Ga0501048_0249889 3300049582 Bacteria 1259
169 Ga0501068_0002025 3300049584 Bacteria 10790
170 Ga0501069_0004971 3300049585 Bacteria 6897
171 Ga0501070_0017943 3300049586 Bacteria 5941
172 Ga0501071_0073334 3300049587 Bacteria 2497
173 Ga0501072_0083643 3300049588 Bacteria 2530
174 Ga0501073_0088841 3300049589 Bacteria 2148
175 Ga0501225_0003940 3300049705 Bacteria 4443
176 Ga0501035_0005462 3300049822 Bacteria 12022
177 Ga0501035_0019161 3300049822 Bacteria 6299
178 Ga0501035_0031671 3300049822 Bacteria 4816
179 Ga0501044_0000077 3300049823 Bacteria 119196
180 Ga0501044_0001660 3300049823 Bacteria 26109
181 Ga0501044_0008099 3300049823 Bacteria 11536
182 Ga0501044_0025268 3300049823 Bacteria 6296
183 Ga0501044_0038397 3300049823 Bacteria 5000
184 Ga0501044_0284698 3300049823 Bacteria 1585
185 nmdc:mga00v17_106173_c1 3300050491 Bacteria 1777
186 nmdc:mga0sz30_76131_c1 3300050516 Bacteria 1449
187 Ga0500643_000168 3300053087 Bacteria 64858
188 Ga0500646_0000727 3300053090 Bacteria 9319
189 Ga0500651_0027461 3300053093 Bacteria 3580
190 Ga0500566_0002193 3300053094 Bacteria 11509
191 Ga0500641_0016169 3300053096 Bacteria 2777
192 Ga0500556_0004586 3300053104 Bacteria 3928
193 Ga0500562_004558 3300053108 Bacteria 3499
194 Ga0500562_005627 3300053108 Bacteria 3153
195 Ga0500559_0086078 3300053136 Bacteria 1434
196 Ga0500568_0000261 3300053139 Bacteria 44777
197 Ga0500604_0000039 3300053151 Bacteria 50663
198 Ga0500604_0013735 3300053151 Bacteria 2197
199 Ga0500616_0062674 3300053153 Bacteria 1920
200 Ga0500622_0010195 3300053156 Bacteria 5166
201 Ga0500645_015044 3300053730 Bacteria 2458
202 Ga0500645_018539 3300053730 Bacteria 2173
203 Ga0500599_001052 3300053736 Bacteria 3114
204 Ga0501082_0284824 3300060353 Bacteria 1438
205 2501079227 2501025502 Bacteria 9641094
206 2511093616 2510917013 Bacteria 9951648
207 2554815776 2554235132 Bacteria 6772433
208 2599103325 2597490356 Bacteria 7030811
209 2599906810 2599185292 Bacteria 6290804
210 2608385204 2606217733 Bacteria 6360972
211 2643836474 2643221563 Bacteria 4726935
212 2643862895 2643221569 Bacteria 6064337
213 2643978319 2643221594 Bacteria 5811388
214 2644052951 2643221608 Bacteria 4724829
215 2644123859 2643221621 Bacteria 6212786
216 2809031368 2808606395 Bacteria 6020352
217 2834643413 2834641062 Bacteria 5559922
218 2846953209 2846952575 Bacteria 6587527
219 2848863509 2848858292 Bacteria 7391279
220 2855735233 2855730933 Bacteria 7047938
221 2855771017 2855767633 Bacteria 7049357
222 2857505141 2857504554 Bacteria 5369913
223 2857539412 2857537821 Bacteria 5248181
224 2857545632 2857542790 Bacteria 5326616
225 2858951176 2858950400 Bacteria 6783797
226 2881418400 2881412998 Bacteria 6492157
227 2894417415 2894414249 Bacteria 4405451
228 2897806301 2897803580 Bacteria 7000062
229 2941480735
230 8003402655 8003400568 Bacteria 5535898
231 8054007673 8054002106 Bacteria 7987183
232 8056691009 8056689827 Bacteria 6712655
233 Ga0500655_001865
234 JGI25151J46595_10000170
235 JGI25153J46596_10003895
236 Ga0055539_1001117
237 Ga0055543_1001239
238 Ga0065165_1000611
239 Ga0065165_1001816
240 Ga0065704_10070144
241 Ga0070670_100060425
242 Ga0070668_100000837
243 Ga0070669_100002139
244 Ga0070669_100116121
245 Ga0070671_100043421
246 Ga0070667_100001768
247 Ga0070667_100012967
248 Ga0070707_100227270
249 Ga0070665_100003425
250 Ga0070665_100084252
251 Ga0070665_100285880
252 Ga0068857_100045404
253 Ga0068863_100139205
254 Ga0068858_100321926
255 Ga0068860_100004522
256 Ga0068860_100047510
257 Ga0068862_100011117
258 Ga0081540_1015257
259 Ga0075369_10009461
260 Ga0075366_10007141
261 Ga0075366_10075205
262 Ga0099794_10021457
263 Ga0099795_10036462
264 Ga0105251_10001494
265 Ga0105251_10010227
266 Ga0105248_10003246
267 Ga0105248_10006734
268 Ga0105148_100158
269 Ga0157371_10027035
270 Ga0209677_100354
271 Ga0209233_1005616
272 Ga0209675_1002317
273 Ga0209025_1000071
274 Ga0209758_1002566
275 Ga0209758_1026579
276 Ga0209050_1013714
277 Ga0207426_1001670
278 Ga0207713_1002634
279 Ga0207713_1006384
280 Ga0207681_10000907
281 Ga0207650_10185203
282 Ga0207644_10015770
283 Ga0207711_10002461
284 Ga0207711_10003945
285 Ga0207668_10000581
286 Ga0207658_10001316
287 Ga0207658_10011212
288 Ga0207703_10048575
289 Ga0207641_10267617
290 Ga0207674_10029363
291 Ga0268266_10003737
292 Ga0268266_10063024
293 Ga0268266_10110157
294 Ga0268265_10031488
295 Ga0268264_10000853
296 Ga0268264_10005290
297 Ga0268264_10008811
298 Ga0307511_10000102
299 Ga0314311_1060158
300 Ga0307408_100001003
301 Ga0307405_10001460
302 Ga0307405_10003035
303 Ga0307406_10003352
304 Ga0307412_10000229
305 Ga0307412_10002410
306 Ga0307416_100004164
307 Ga0307510_10000119
308 Ga0307510_10016609
309 Ga0307510_10038371
310 Ga0373939_0000046
311 Ga0373931_0000162
312 Ga0439436_0020858
313 Ga0466957_0015922
314 Ga0495585_0000117
315 Ga0495607_0017851
316 Ga0495610_0001318
317 Ga0495610_0023512
318 Ga0495631_0000729
319 Ga0495637_0003614
320 Ga0495625_0092488
321 Ga0495671_0133559
322 Ga0495660_0002478
323 Ga0495672_0018314
324 Ga0495686_0000084
325 Ga0495686_0028919
326 Ga0495686_0114640
327 Ga0495615_0000129
328 Ga0496103_0001978
329 Ga0496108_0008117
330 Ga0496116_0001498
331 Ga0496116_0002682
332 Ga0496116_0022546
333 Ga0496116_0044041
334 Ga0496117_0002895
335 Ga0496117_0011672
336 Ga0496117_0019078
337 Ga0496117_0029496
338 Ga0496118_0010391
339 Ga0496118_0014049
340 Ga0496118_0015556
341 Ga0496118_0025914
342 Ga0496118_0038298
343 Ga0496118_0054710
344 Ga0496118_0143274
345 Ga0496119_0011807
346 Ga0496119_0022857
347 Ga0496119_0031747
348 Ga0496119_0082012
349 Ga0496120_0003235
350 Ga0496120_0048708
351 Ga0496121_0000293
352 Ga0496121_0000848
353 Ga0496121_0001717
354 Ga0496121_0002130
355 Ga0496121_0004236
356 Ga0496121_0004932
357 Ga0496121_0005818
358 Ga0496121_0026631
359 Ga0496121_0057506
360 Ga0496122_0000165
361 Ga0496122_0000383
362 Ga0496122_0001014
363 Ga0496122_0001620
364 Ga0496122_0055230
365 Ga0496123_0000212
366 Ga0496123_0000249
367 Ga0496123_0000471
368 Ga0496123_0001243
369 Ga0496123_0026683
370 Ga0496123_0030561
371 Ga0496124_0000004
372 Ga0496124_0004255
373 Ga0496124_0047817
374 Ga0496124_0066346
375 Ga0496125_0000042
376 Ga0496125_0030880
377 Ga0496126_0003911
378 Ga0496126_0009492
379 Ga0496126_0089342
380 Ga0496126_0173032
381 Ga0501031_0075265
382 Ga0501032_0005347
383 Ga0501032_0015592
384 Ga0501033_0022681
385 Ga0501033_0039874
386 Ga0501033_0174251
387 Ga0501034_0005122
388 Ga0501034_0079586
389 Ga0501034_0201268
390 Ga0501036_0010912
391 Ga0501037_0008289
392 Ga0501038_0000744
393 Ga0501039_0004340
394 Ga0501042_0016703
395 Ga0501043_0060361
396 Ga0501046_0012437
397 Ga0501047_0071336
398 Ga0501047_0118996
399 Ga0501047_0153729
400 Ga0501048_0249889
401 Ga0501068_0002025
402 Ga0501069_0004971
403 Ga0501070_0017943
404 Ga0501071_0073334
405 Ga0501072_0083643
406 Ga0501073_0088841
407 Ga0501225_0003940
408 Ga0501035_0005462
409 Ga0501035_0019161
410 Ga0501035_0031671
411 Ga0501044_0000077
412 Ga0501044_0001660
413 Ga0501044_0008099
414 Ga0501044_0025268
415 Ga0501044_0038397
416 Ga0501044_0284698
417 nmdc:mga00v17_106173_c1
418 nmdc:mga0sz30_76131_c1
419 Ga0500643_000168
420 Ga0500646_0000727
421 Ga0500651_0027461
422 Ga0500566_0002193
423 Ga0500641_0016169
424 Ga0500556_0004586
425 Ga0500562_004558
426 Ga0500562_005627
427 Ga0500559_0086078
428 Ga0500568_0000261
429 Ga0500604_0000039
430 Ga0500604_0013735
431 Ga0500616_0062674
432 Ga0500622_0010195
433 Ga0500645_015044
434 Ga0500645_018539
435 Ga0500599_001052
436 Ga0501082_0284824
437 2501079227
438 2511093616
439 2554815776
440 2599103325
441 2599906810
442 2608385204
443 2643836474
444 2643862895
445 2643978319
446 2644052951
447 2644123859
448 2809031368
449 2834643413
450 2846953209
451 2848863509
452 2855735233
453 2855771017
454 2857505141
455 2857539412
456 2857545632
457 2858951176
458 2881418400
459 2894417415
460 2897806301
461 2941480735
462 8003402655
463 8054007673
464 8056691009

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03929

PepSY_TM

PepSY-associated TM region

65

420

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
5efv-assembly1.cif.gz_A the host-recognition device of staphylococcus aureus phage phi11 0.798 75 120
5efv-assembly1.cif.gz_B the host-recognition device of staphylococcus aureus phage phi11 0.7932 75 119
8shj-assembly1.cif.gz_A crystal structure of the wd-repeat domain of human wdr91 in complex with mr45279 0.7341 281 317
3ddu-assembly1.cif.gz_A prolyl oligopeptidase with gsk552 0.7304 75 121
4ax4-assembly1.cif.gz_A prolyl oligopeptidase from porcine brain, h680a mutant 0.7289 75 121
ID Description Score Start End Superfamily
af_Q4D5X2_1_366_2.130.10.110 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;Clathrin heavy-chain terminal domain 0.8693 76 119 2.130.10.110
af_I1MB48_1_267_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.8542 81 119 2.130.10.10
af_A0A1D6FSG1_60_366_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.8374 81 122 2.130.10.10
af_Q4DSU7_113_295_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.8112 75 123 2.130.10.10
af_Q4CP89_48_240_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.7813 266 318 2.130.10.10
ID Description Score Start End GO Terms
AF-A0A1H7YCY8-F1-model_v4 Uncharacterized protein 0.9341 252 318
AF-A0A6I1NT44-F1-model_v4 PepSY domain-containing protein 0.8865 190 363 GO:0016020
AF-A0A6I1NT44-F1-model_v4 PepSY domain-containing protein 0.8725 190 363 GO:0016020
AF-A0A1H1R486-F1-model_v4 Uncharacterized iron-regulated membrane protein 0.8713 1 382 GO:0016020
AF-A0A1G5A6F3-F1-model_v4 Uncharacterized iron-regulated membrane protein 0.8706 6 365 GO:0016020

Map