F345532

General Info

Members Datasets Scaffolds Average Seq Length
232 143 221 468

Family's Representative Sequence

Representative Sequence 3300049744|Ga0501083_0050008|Ga0501083_0050008_53_1630
Length 525
Sequence MAQNLPAAPATQRSFFFATKERKRGARPPRGLNAAERTFHLDALLRPAALPSDRPIRAVIAPLTVGEPNLASFPPRMSKKRFAFVGTGGRAISFLEPLVTTYRDTNELVAICDLSPARMAYYNELLAGDWRYHAVPAYAAADFDRMLRETKPDTVFVCSKDDTHHDYIVRALQAGCDAITEKPMTIDAPKCRAILDAQRASGRRVRVAFNYRWAPFRTKVRELIASGTIGRVHSVNLEYLLDTNHGADYFRRWHAHAAESGTLLVHKSTHHFDLVNWWLDAVPAQVFAYGDLVFYGRKNAEARGDGALTKYDRYTGHPEAKGDPFNLNLDESEPFRKIYRAGEADSGYVRDRNVFRDDIDIYDQMSLNVRYRTGEVLTYSLVCYSPREGMRVCLNGDRGRIEYHEFIGTHMNRAVRPKDFKLDEKPGAEAEGEWIKVYPHFKPSYTVPMPAATGAHGGADAMLNEQFYSPDAQPDAWGRAAGHEQGAASILVGIAGVESIKRNQPVNITDLVPLRPEAKRLSELV

Samples

Sample ID Description Type Environment
1 2643221622 Sphingomonas sp. Root241 Isolate Unclassified
2 2643221645 Massilia sp. Root351 Isolate Unclassified
3 2643221664 Massilia sp. Root418 Isolate Unclassified
4 2738541300 Massilia sp. GV016 Isolate Unclassified
5 2738543018 Massilia sp. GV045 Isolate Unclassified
6 2738543030 Massilia sp. GV097 Isolate Unclassified
7 2808606418 Herbaspirillum sp. SJZ107 Isolate Rhizosphere
8 2842711865 Duganella sp. R-73148 Isolate Unclassified
9 2857553236 Duganella sp. R-74557 Isolate Unclassified
10 2857558681 Duganella sp. R-74565 Isolate Unclassified
11 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
12 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
13 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
14 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
15 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
16 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
17 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
18 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
19 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
25 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
26 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
27 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
28 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
29 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
30 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
31 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
32 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
33 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
34 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
35 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
36 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
40 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
41 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
42 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
43 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
44 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
45 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
46 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
47 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
48 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
49 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
50 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
51 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
52 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
53 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
54 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
55 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
56 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
57 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
58 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
59 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
60 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
61 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
62 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
63 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
64 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
65 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
66 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
67 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
68 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
69 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
70 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
71 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
72 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
73 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
74 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
75 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
76 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
77 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
78 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
79 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
80 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
81 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
82 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
83 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
84 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
85 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
86 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
87 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
88 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
89 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
90 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
91 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
92 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
93 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
94 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
95 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
96 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
97 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
98 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
99 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
100 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
101 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
102 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
103 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
104 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
105 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
106 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
107 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
108 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
109 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
110 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
111 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
112 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
113 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
114 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
115 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
116 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
117 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
131 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
132 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
133 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
135 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
136 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
137 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
138 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
139 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
140 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
141 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
142 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
143 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.69
Metatranscriptomes 0
Isolates 4.31

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.5
Nodule 1.29
Rhizoplane 0.43
Rhizosphere 80.17
Stem 0
Stem Tuber 0
Unclassified 5.6

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10014146 3300003203 Bacteria 3401
2 rootL2_10103693 3300003322 Bacteria 5548
3 Ga0055524_1000029 3300003775 Bacteria 201332
4 Ga0055524_1000345 3300003775 Bacteria 42426
5 Ga0055530_10000061 3300003791 Bacteria 95363
6 Ga0055531_10000035 3300003794 Bacteria 147414
7 Ga0055531_10003469 3300003794 Bacteria 10032
8 Ga0065165_1011582 3300005262 Bacteria 3657
9 Ga0070658_10008455 3300005327 Bacteria 8276
10 Ga0070683_100013675 3300005329 Bacteria 7086
11 Ga0070683_100023787 3300005329 Bacteria 5483
12 Ga0070671_100006861 3300005355 Bacteria 9117
13 Ga0070681_10021782 3300005458 Bacteria 6427
14 Ga0070684_100101149 3300005535 Bacteria 2575
15 Ga0068857_100014341 3300005577 Bacteria 6908
16 Ga0068856_100005677 3300005614 Bacteria 12287
17 Ga0068856_100063906 3300005614 Bacteria 3636
18 Ga0068864_100166463 3300005618 Bacteria 2007
19 Ga0081539_10000038 3300005985 Bacteria 296079
20 Ga0075366_10025271 3300006195 Bacteria 3468
21 Ga0099826_10000003 3300006948 Bacteria 1067817
22 Ga0105238_10031698 3300009551 Bacteria 5380
23 Ga0157372_10048833 3300013307 Bacteria 4704
24 Ga0209565_1000008 3300025263 Bacteria 774179
25 Ga0209673_1002083 3300025273 Bacteria 15037
26 Ga0209758_1004526 3300025297 Bacteria 11514
27 Ga0209050_1000014 3300025298 Bacteria 774327
28 Ga0209050_1004047 3300025298 Bacteria 10284
29 Ga0209256_1000009 3300025299 Bacteria 922071
30 Ga0209256_1000010 3300025299 Bacteria 912110
31 Ga0209256_1000013 3300025299 Bacteria 689442
32 Ga0209257_1000019 3300025304 Bacteria 774261
33 Ga0209257_1003277 3300025304 Bacteria 14131
34 Ga0207661_10008329 3300025944 Bacteria 7405
35 Ga0207702_10001130 3300026078 Bacteria 27269
36 Ga0207674_10023420 3300026116 Bacteria 6615
37 Ga0209281_1004424 3300027111 Bacteria 4213
38 Ga0209282_1000002 3300027666 Bacteria 1067825
39 Ga0265319_1000046 3300028563 Bacteria 101716
40 Ga0265334_10001982 3300028573 Bacteria 9735
41 Ga0265318_10000202 3300028577 Bacteria 51177
42 Ga0265318_10044522 3300028577 Bacteria 1679
43 Ga0265323_10002874 3300028653 Bacteria 7736
44 Ga0265336_10009030 3300028666 Bacteria 3464
45 Ga0307515_10002761 3300028794 Bacteria 37491
46 Ga0265338_10014826 3300028800 Bacteria 8625
47 Ga0265338_10018329 3300028800 Bacteria 7499
48 Ga0265320_10000970 3300031240 Bacteria 21353
49 Ga0265320_10019611 3300031240 Bacteria 3693
50 Ga0265331_10007699 3300031250 Bacteria 6198
51 Ga0265327_10003308 3300031251 Bacteria 15610
52 Ga0265327_10003568 3300031251 Bacteria 14720
53 Ga0265327_10023738 3300031251 Bacteria 3622
54 Ga0307513_10097428 3300031456 Bacteria 2976
55 Ga0265313_10012758 3300031595 Bacteria 5101
56 Ga0307508_10000024 3300031616 Bacteria 176806
57 Ga0265314_10000911 3300031711 Bacteria 34849
58 Ga0265314_10001794 3300031711 Bacteria 23144
59 Ga0307409_100143347 3300031995 Bacteria 2062
60 Ga0373927_0002025 3300035695 Bacteria 14928
61 Ga0373937_0089527 3300036401 Bacteria 2850
62 Ga0439461_0000074 3300041410 Bacteria 12981
63 Ga0439465_0012841 3300041413 Bacteria 2619
64 Ga0439431_0000118 3300041997 Bacteria 13798
65 Ga0439442_003364 3300042002 Bacteria 3160
66 Ga0439432_000479 3300042006 Bacteria 14968
67 Ga0439452_014403 3300042010 Bacteria 2198
68 Ga0439462_0015071 3300042015 Bacteria 1989
69 Ga0439434_0000336 3300042435 Bacteria 13330
70 Ga0451577_0000012 3300042876 Bacteria 575467
71 Ga0451577_0006066 3300042876 Bacteria 12155
72 Ga0451577_0074231 3300042876 Bacteria 3034
73 Ga0451577_0237639 3300042876 Bacteria 1648
74 Ga0466969_0021240 3300044656 Unclassified 3357
75 Ga0453683_0011050 3300044673 Bacteria 5968
76 Ga0466966_0094595 3300044684 Bacteria 1852
77 Ga0453684_0095999 3300044712 Bacteria 3643
78 Ga0466959_0011395 3300045049 Bacteria 6387
79 Ga0451576_0000087 3300045051 Bacteria 234554
80 Ga0451576_0002371 3300045051 Bacteria 28382
81 Ga0451576_0003306 3300045051 Bacteria 22385
82 Ga0451576_0031557 3300045051 Bacteria 5647
83 Ga0495617_004005 3300046452 Bacteria 5412
84 Ga0495617_020041 3300046452 Bacteria 2260
85 Ga0495627_018503 3300046453 Bacteria 2347
86 Ga0495638_0002770 3300046460 Bacteria 14090
87 Ga0495650_0001447 3300046471 Bacteria 22856
88 Ga0495605_0027732 3300046474 Bacteria 2931
89 Ga0495605_0069456 3300046474 Bacteria 1668
90 Ga0495584_0001966 3300046491 Bacteria 11819
91 Ga0495585_0000238 3300046492 Bacteria 57003
92 Ga0495585_0005853 3300046492 Bacteria 7708
93 Ga0495585_0043356 3300046492 Bacteria 2516
94 Ga0495596_0000097 3300046500 Bacteria 62327
95 Ga0495596_0002923 3300046500 Bacteria 8877
96 Ga0495596_0029190 3300046500 Bacteria 2212
97 Ga0495607_0009409 3300046501 Bacteria 6614
98 Ga0495583_0000325 3300046506 Bacteria 75322
99 Ga0495583_0001793 3300046506 Bacteria 20372
100 Ga0495606_0000495 3300046507 Bacteria 64404
101 Ga0495606_0003496 3300046507 Bacteria 16639
102 Ga0495606_0025108 3300046507 Bacteria 4276
103 Ga0495616_0001630 3300046513 Bacteria 15381
104 Ga0495630_0021070 3300046517 Bacteria 4813
105 Ga0495632_0019764 3300046519 Bacteria 3662
106 Ga0495632_0041053 3300046519 Bacteria 2326
107 Ga0495643_0000106 3300046522 Bacteria 138657
108 Ga0495643_0000521 3300046522 Bacteria 47921
109 Ga0495644_0002320 3300046523 Bacteria 7613
110 Ga0495648_0000183 3300046524 Bacteria 72118
111 Ga0495648_0002372 3300046524 Bacteria 17491
112 Ga0495642_0001320 3300046528 Bacteria 11103
113 Ga0495642_0015553 3300046528 Bacteria 2959
114 Ga0495642_0018050 3300046528 Bacteria 2759
115 Ga0495609_0000298 3300046538 Bacteria 45867
116 Ga0495609_0003222 3300046538 Bacteria 9463
117 Ga0495609_0017562 3300046538 Bacteria 3322
118 Ga0495597_0000243 3300046542 Bacteria 49541
119 Ga0495597_0005538 3300046542 Bacteria 6675
120 Ga0495597_0007262 3300046542 Bacteria 5644
121 Ga0495597_0008454 3300046542 Bacteria 5160
122 Ga0495633_0000671 3300046558 Bacteria 31589
123 Ga0495633_0015566 3300046558 Bacteria 3943
124 Ga0495656_0033304 3300046615 Bacteria 2102
125 Ga0495668_0007862 3300046616 Bacteria 6743
126 Ga0495668_0016191 3300046616 Bacteria 4336
127 Ga0495611_0002287 3300046648 Bacteria 8870
128 Ga0495625_0000128 3300046660 Bacteria 118013
129 Ga0495625_0010844 3300046660 Bacteria 7494
130 Ga0495625_0089607 3300046660 Bacteria 2129
131 Ga0495635_0105516 3300046663 Bacteria 1925
132 Ga0495659_0004534 3300046664 Bacteria 4370
133 Ga0495659_0024608 3300046664 Bacteria 2055
134 Ga0495661_0005659 3300046665 Bacteria 8856
135 Ga0495661_0008201 3300046665 Bacteria 7235
136 Ga0495661_0049760 3300046665 Bacteria 2539
137 Ga0495669_0001566 3300046684 Bacteria 9400
138 Ga0495613_0102542 3300046689 Bacteria 2066
139 Ga0495670_0000007 3300046691 Bacteria 247088
140 Ga0495670_0054974 3300046691 Bacteria 1996
141 Ga0495671_0002651 3300046692 Bacteria 11241
142 Ga0495671_0011522 3300046692 Bacteria 4859
143 Ga0495649_0002837 3300046694 Bacteria 12028
144 Ga0495589_0019050 3300046794 Bacteria 3520
145 Ga0495589_0027717 3300046794 Bacteria 2863
146 Ga0495589_0031477 3300046794 Bacteria 2670
147 Ga0495660_0000597 3300046810 Bacteria 28558
148 Ga0495660_0000956 3300046810 Bacteria 21107
149 Ga0495660_0003280 3300046810 Bacteria 10041
150 Ga0495581_0151281 3300047315 Bacteria 1355
151 Ga0495672_0000141 3300047320 Bacteria 106630
152 Ga0495672_0000188 3300047320 Bacteria 89538
153 Ga0495672_0000264 3300047320 Bacteria 72738
154 Ga0495683_0005563 3300047323 Bacteria 6986
155 Ga0495683_0025317 3300047323 Bacteria 3043
156 Ga0495677_0000049 3300047445 Bacteria 68714
157 Ga0495677_0008199 3300047445 Bacteria 3881
158 Ga0495677_0014764 3300047445 Bacteria 2841
159 Ga0495673_0000024 3300047469 Bacteria 521349
160 Ga0495681_0017075 3300047470 Bacteria 4042
161 Ga0495626_0004451 3300048091 Bacteria 8597
162 Ga0495626_0017694 3300048091 Bacteria 3593
163 Ga0496104_0167538 3300048907 Bacteria 2107
164 Ga0495678_000101 3300049459 Bacteria 104596
165 Ga0495678_004707 3300049459 Bacteria 7797
166 Ga0501031_0001693 3300049568 Bacteria 13852
167 Ga0501032_0001693 3300049569 Bacteria 17456
168 Ga0501032_0005644 3300049569 Bacteria 9271
169 Ga0501032_0019218 3300049569 Bacteria 4780
170 Ga0501033_0013689 3300049570 Bacteria 6171
171 Ga0501033_0021266 3300049570 Bacteria 4894
172 Ga0501033_0114087 3300049570 Bacteria 1964
173 Ga0501034_0165543 3300049571 Bacteria 2180
174 Ga0501036_0005257 3300049572 Bacteria 10472
175 Ga0501036_0024937 3300049572 Bacteria 5043
176 Ga0501036_0226355 3300049572 Bacteria 1570
177 Ga0501037_0024947 3300049573 Bacteria 4419
178 Ga0501037_0048496 3300049573 Bacteria 3111
179 Ga0501037_0076521 3300049573 Bacteria 2429
180 Ga0501038_0001409 3300049574 Bacteria 22009
181 Ga0501039_0007791 3300049575 Bacteria 8168
182 Ga0501039_0133136 3300049575 Bacteria 1951
183 Ga0501042_0001619 3300049578 Bacteria 13396
184 Ga0501042_0018503 3300049578 Bacteria 4824
185 Ga0501043_0009805 3300049579 Bacteria 7507
186 Ga0501043_0033282 3300049579 Bacteria 4054
187 Ga0501043_0070395 3300049579 Bacteria 2747
188 Ga0501046_0000568 3300049580 Bacteria 36584
189 Ga0501046_0023159 3300049580 Bacteria 5112
190 Ga0501046_0055521 3300049580 Bacteria 3111
191 Ga0501047_0013387 3300049581 Bacteria 7775
192 Ga0501047_0033094 3300049581 Bacteria 4991
193 Ga0501047_0062053 3300049581 Bacteria 3606
194 Ga0501047_0090295 3300049581 Unclassified 2940
195 Ga0501047_0094792 3300049581 Bacteria 2863
196 Ga0501047_0164893 3300049581 Bacteria 2086
197 Ga0501047_0173245 3300049581 Bacteria 2026
198 Ga0501048_0002090 3300049582 Bacteria 15214
199 Ga0501048_0019981 3300049582 Bacteria 4911
200 Ga0501048_0046323 3300049582 Bacteria 3104
201 Ga0501068_0084568 3300049584 Bacteria 1952
202 Ga0501243_008905 3300049675 Bacteria 1554
203 Ga0501083_0050008 3300049744 Bacteria 2815
204 Ga0501035_0000115 3300049822 Bacteria 98344
205 Ga0501035_0002984 3300049822 Bacteria 16253
206 Ga0501035_0011411 3300049822 Bacteria 8237
207 Ga0501044_0001476 3300049823 Bacteria 27579
208 Ga0501044_0055843 3300049823 Bacteria 4054
209 Ga0501044_0104612 3300049823 Bacteria 2844
210 nmdc:mga0k408_11893_c1 3300050493 Bacteria 4748
211 Ga0500643_007039 3300053087 Bacteria 4611
212 Ga0500566_0000900 3300053094 Bacteria 17003
213 Ga0500562_026369 3300053108 Bacteria 1523
214 Ga0500594_0011450 3300053118 Bacteria 2071
215 Ga0500658_0002148 3300053134 Bacteria 7669
216 Ga0500658_0002294 3300053134 Bacteria 7411
217 Ga0500568_0018440 3300053139 Bacteria 3054
218 Ga0500586_000034 3300053145 Bacteria 24197
219 Ga0500622_0001681 3300053156 Bacteria 17238
220 Ga0500622_0003280 3300053156 Bacteria 10971
221 Ga0500622_0061421 3300053156 Bacteria 1915

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049823 Ga0501044_0104612 Ga0501044_0104612_30_1148 359
2 3300049581 Ga0501047_0062053 Ga0501047_0062053_2348_3547 385
3 3300053108 Ga0500562_026369 Ga0500562_026369_266_1501 405
4 3300049571 Ga0501034_0165543 Ga0501034_0165543_716_1993 411
5 3300049573 Ga0501037_0024947 Ga0501037_0024947_1626_2903 411
6 3300049580 Ga0501046_0000568 Ga0501046_0000568_35048_36385 414
7 3300049581 Ga0501047_0033094 Ga0501047_0033094_3449_4786 414
8 3300028666 Ga0265336_10009030 Ga0265336_100090302 417
9 3300044656 Ga0466969_0021240 Ga0466969_0021240_463_1812 421
10 3300044684 Ga0466966_0094595 Ga0466966_0094595_261_1610 421
11 3300045049 Ga0466959_0011395 Ga0466959_0011395_4407_5756 421
12 3300047315 Ga0495581_0151281 Ga0495581_0151281_28_1323 422
13 3300046517 Ga0495630_0021070 Ga0495630_0021070_1000_2445 426
14 3300046663 Ga0495635_0105516 Ga0495635_0105516_459_1904 426
15 3300049568 Ga0501031_0001693 Ga0501031_0001693_9217_10560 426
16 3300049569 Ga0501032_0019218 Ga0501032_0019218_2743_4086 426
17 3300049570 Ga0501033_0021266 Ga0501033_0021266_284_1627 426
18 3300049570 Ga0501033_0114087 Ga0501033_0114087_282_1625 426
19 3300049572 Ga0501036_0024937 Ga0501036_0024937_3003_4346 426
20 3300049573 Ga0501037_0048496 Ga0501037_0048496_698_2041 426
21 3300049574 Ga0501038_0001409 Ga0501038_0001409_20100_21443 426
22 3300049575 Ga0501039_0133136 Ga0501039_0133136_567_1910 426
23 3300049578 Ga0501042_0018503 Ga0501042_0018503_2612_3955 426
24 3300049579 Ga0501043_0033282 Ga0501043_0033282_1575_2918 426
25 3300049580 Ga0501046_0055521 Ga0501046_0055521_1071_2414 426
26 3300049581 Ga0501047_0094792 Ga0501047_0094792_1169_2512 426
27 3300049581 Ga0501047_0164893 Ga0501047_0164893_352_1695 426
28 3300049582 Ga0501048_0019981 Ga0501048_0019981_3002_4345 426
29 3300049822 Ga0501035_0011411 Ga0501035_0011411_4200_5543 426
30 3300049823 Ga0501044_0055843 Ga0501044_0055843_2360_3703 426
31 3300028563 Ga0265319_1000046 Ga0265319_100004627 427
32 3300028577 Ga0265318_10044522 Ga0265318_100445222 427
33 3300031240 Ga0265320_10000970 Ga0265320_100009705 427
34 3300031711 Ga0265314_10001794 Ga0265314_100017945 427
35 3300031995 Ga0307409_100143347 Ga0307409_1001433471 427
36 3300042876 Ga0451577_0006066 Ga0451577_0006066_9006_10355 427
37 3300044712 Ga0453684_0095999 Ga0453684_0095999_832_2181 427
38 3300045051 Ga0451576_0031557 Ga0451576_0031557_715_2061 427
39 3300046689 Ga0495613_0102542 Ga0495613_0102542_333_1778 427
40 3300003322 rootL2_10103693 rootL2_101036934 428
41 3300005329 Ga0070683_100013675 Ga0070683_1000136753 428
42 3300005329 Ga0070683_100023787 Ga0070683_1000237872 428
43 3300005535 Ga0070684_100101149 Ga0070684_1001011492 428
44 3300005577 Ga0068857_100014341 Ga0068857_1000143414 428
45 3300005614 Ga0068856_100005677 Ga0068856_1000056773 428
46 3300005614 Ga0068856_100063906 Ga0068856_1000639063 428
47 3300005618 Ga0068864_100166463 Ga0068864_1001664632 428
48 3300006195 Ga0075366_10025271 Ga0075366_100252712 428
49 3300025944 Ga0207661_10008329 Ga0207661_100083295 428
50 3300026078 Ga0207702_10001130 Ga0207702_100011308 428
51 3300026116 Ga0207674_10023420 Ga0207674_100234202 428
52 3300028573 Ga0265334_10001982 Ga0265334_100019822 428
53 3300028577 Ga0265318_10000202 Ga0265318_1000020216 428
54 3300028653 Ga0265323_10002874 Ga0265323_100028743 428
55 3300028800 Ga0265338_10014826 Ga0265338_100148266 428
56 3300031240 Ga0265320_10019611 Ga0265320_100196111 428
57 3300031250 Ga0265331_10007699 Ga0265331_100076993 428
58 3300031251 Ga0265327_10003568 Ga0265327_100035688 428
59 3300031595 Ga0265313_10012758 Ga0265313_100127582 428
60 3300031616 Ga0307508_10000024 Ga0307508_10000024152 428
61 3300031711 Ga0265314_10000911 Ga0265314_1000091121 428
62 3300042876 Ga0451577_0000012 Ga0451577_0000012_449770_451122 428
63 3300042876 Ga0451577_0074231 Ga0451577_0074231_708_2060 428
64 3300042876 Ga0451577_0237639 Ga0451577_0237639_176_1531 428
65 3300044673 Ga0453683_0011050 Ga0453683_0011050_4416_5768 428
66 3300045051 Ga0451576_0000087 Ga0451576_0000087_122685_124070 428
67 3300045051 Ga0451576_0002371 Ga0451576_0002371_20232_21584 428
68 3300045051 Ga0451576_0003306 Ga0451576_0003306_15385_16842 428
69 3300049569 Ga0501032_0001693 Ga0501032_0001693_10349_11770 428
70 3300049569 Ga0501032_0005644 Ga0501032_0005644_3282_4631 428
71 3300049570 Ga0501033_0013689 Ga0501033_0013689_3350_4702 428
72 3300049572 Ga0501036_0005257 Ga0501036_0005257_6131_7480 428
73 3300049572 Ga0501036_0226355 Ga0501036_0226355_20_1372 428
74 3300049573 Ga0501037_0076521 Ga0501037_0076521_369_1721 428
75 3300049575 Ga0501039_0007791 Ga0501039_0007791_3720_5069 428
76 3300049578 Ga0501042_0001619 Ga0501042_0001619_9855_11207 428
77 3300049579 Ga0501043_0009805 Ga0501043_0009805_63_1484 428
78 3300049579 Ga0501043_0070395 Ga0501043_0070395_777_2126 428
79 3300049580 Ga0501046_0000568 Ga0501046_0000568_33587_34921 428
80 3300049580 Ga0501046_0023159 Ga0501046_0023159_2130_3551 428
81 3300049581 Ga0501047_0013387 Ga0501047_0013387_4969_6321 428
82 3300049581 Ga0501047_0090295 Ga0501047_0090295_208_1542 428
83 3300049581 Ga0501047_0173245 Ga0501047_0173245_296_1648 428
84 3300049582 Ga0501048_0002090 Ga0501048_0002090_3401_4753 428
85 3300049582 Ga0501048_0046323 Ga0501048_0046323_576_1925 428
86 3300049584 Ga0501068_0084568 Ga0501068_0084568_337_1689 428
87 3300049744 Ga0501083_0050008 Ga0501083_0050008_53_1630 428
88 3300049822 Ga0501035_0000115 Ga0501035_0000115_72842_74263 428
89 3300049822 Ga0501035_0002984 Ga0501035_0002984_4897_6249 428
90 3300049823 Ga0501044_0001476 Ga0501044_0001476_19943_21364 428
91 3300050493 nmdc:mga0k408_11893_c1 nmdc:mga0k408_11893_c1_1870_3219 428
92 3300053139 Ga0500568_0018440 Ga0500568_0018440_67_1419 428
93 3300046542 Ga0495597_0005538 Ga0495597_0005538_81_1385 430
94 3300046664 Ga0495659_0004534 Ga0495659_0004534_2400_3704 430
95 3300049675 Ga0501243_008905 Ga0501243_008905_36_1343 430
96 3300028800 Ga0265338_10018329 Ga0265338_100183295 434
97 3300005327 Ga0070658_10008455 Ga0070658_100084553 436
98 3300005355 Ga0070671_100006861 Ga0070671_1000068614 436
99 3300046474 Ga0495605_0027732 Ga0495605_0027732_1064_2527 437
100 3300046538 Ga0495609_0000298 Ga0495609_0000298_13616_15079 437
101 3300046794 Ga0495589_0027717 Ga0495589_0027717_972_2435 438
102 3300035695 Ga0373927_0002025 Ga0373927_0002025_5133_6515 439
103 3300036401 Ga0373937_0089527 Ga0373937_0089527_1143_2555 440
104 3300046500 Ga0495596_0029190 Ga0495596_0029190_608_2056 440
105 3300046474 Ga0495605_0069456 Ga0495605_0069456_69_1523 441
106 3300046506 Ga0495583_0001793 Ga0495583_0001793_12951_14408 441
107 3300046522 Ga0495643_0000521 Ga0495643_0000521_40439_41896 441
108 3300046665 Ga0495661_0005659 Ga0495661_0005659_3469_4926 441
109 3300046558 Ga0495633_0015566 Ga0495633_0015566_1780_3246 442
110 3300047470 Ga0495681_0017075 Ga0495681_0017075_454_1920 442
111 3300049459 Ga0495678_004707 Ga0495678_004707_6167_7633 442
112 3300046491 Ga0495584_0001966 Ga0495584_0001966_7319_8785 447
113 3300046492 Ga0495585_0005853 Ga0495585_0005853_1016_2482 447
114 3300046501 Ga0495607_0009409 Ga0495607_0009409_4173_5639 447
115 3300046506 Ga0495583_0000325 Ga0495583_0000325_40252_41718 447
116 3300046519 Ga0495632_0041053 Ga0495632_0041053_226_1692 447
117 3300046523 Ga0495644_0002320 Ga0495644_0002320_4968_6434 447
118 3300046528 Ga0495642_0015553 Ga0495642_0015553_1073_2539 447
119 3300046616 Ga0495668_0016191 Ga0495668_0016191_284_1750 447
120 3300046648 Ga0495611_0002287 Ga0495611_0002287_3232_4698 447
121 3300046665 Ga0495661_0008201 Ga0495661_0008201_5315_6781 447
122 3300046691 Ga0495670_0054974 Ga0495670_0054974_335_1801 447
123 3300046794 Ga0495589_0019050 Ga0495589_0019050_977_2443 447
124 3300046810 Ga0495660_0003280 Ga0495660_0003280_4403_5869 447
125 3300047445 Ga0495677_0000049 Ga0495677_0000049_50774_52234 447
126 3300047445 Ga0495677_0008199 Ga0495677_0008199_1558_3024 447
127 3300046691 Ga0495670_0000007 Ga0495670_0000007_226607_228034 448
128 3300046500 Ga0495596_0002923 Ga0495596_0002923_6947_8410 451
129 3300027111 Ga0209281_1004424 Ga0209281_10044242 452
130 3300046810 Ga0495660_0000597 Ga0495660_0000597_15447_16919 452
131 3300046810 Ga0495660_0000956 Ga0495660_0000956_16820_18286 452
132 iso_pu_bacteria 2857553236 2857553394 452
133 3300048907 Ga0496104_0167538 Ga0496104_0167538_135_1580 453
134 3300053134 Ga0500658_0002148 Ga0500658_0002148_6126_7586 453
135 3300003775 Ga0055524_1000345 Ga0055524_100034517 454
136 3300003791 Ga0055530_10000061 Ga0055530_1000006115 454
137 3300003794 Ga0055531_10000035 Ga0055531_1000003547 454
138 3300003794 Ga0055531_10003469 Ga0055531_100034695 454
139 3300005262 Ga0065165_1011582 Ga0065165_10115822 454
140 3300025263 Ga0209565_1000008 Ga0209565_1000008269 454
141 3300025273 Ga0209673_1002083 Ga0209673_10020834 454
142 3300025297 Ga0209758_1004526 Ga0209758_10045266 454
143 3300025298 Ga0209050_1000014 Ga0209050_1000014409 454
144 3300025298 Ga0209050_1004047 Ga0209050_10040473 454
145 3300025299 Ga0209256_1000009 Ga0209256_1000009601 454
146 3300025299 Ga0209256_1000010 Ga0209256_1000010525 454
147 3300025304 Ga0209257_1000019 Ga0209257_1000019283 454
148 3300025304 Ga0209257_1003277 Ga0209257_10032777 454
149 3300041410 Ga0439461_0000074 Ga0439461_0000074_11236_12690 454
150 3300041413 Ga0439465_0012841 Ga0439465_0012841_69_1532 454
151 3300041997 Ga0439431_0000118 Ga0439431_0000118_3244_4698 454
152 3300042002 Ga0439442_003364 Ga0439442_003364_553_2007 454
153 3300042006 Ga0439432_000479 Ga0439432_000479_2374_3828 454
154 3300042010 Ga0439452_014403 Ga0439452_014403_323_1777 454
155 3300042015 Ga0439462_0015071 Ga0439462_0015071_265_1719 454
156 3300042435 Ga0439434_0000336 Ga0439434_0000336_9553_11007 454
157 3300046452 Ga0495617_004005 Ga0495617_004005_598_2046 454
158 3300046452 Ga0495617_020041 Ga0495617_020041_215_1663 454
159 3300046453 Ga0495627_018503 Ga0495627_018503_382_1830 454
160 3300046460 Ga0495638_0002770 Ga0495638_0002770_2062_3510 454
161 3300046471 Ga0495650_0001447 Ga0495650_0001447_21104_22552 454
162 3300046492 Ga0495585_0000238 Ga0495585_0000238_7453_8901 454
163 3300046492 Ga0495585_0043356 Ga0495585_0043356_627_2075 454
164 3300046500 Ga0495596_0000097 Ga0495596_0000097_59356_60804 454
165 3300046507 Ga0495606_0003496 Ga0495606_0003496_10923_12371 454
166 3300046507 Ga0495606_0025108 Ga0495606_0025108_593_2041 454
167 3300046513 Ga0495616_0001630 Ga0495616_0001630_1148_2596 454
168 3300046519 Ga0495632_0019764 Ga0495632_0019764_492_1940 454
169 3300046522 Ga0495643_0000106 Ga0495643_0000106_124893_126341 454
170 3300046524 Ga0495648_0000183 Ga0495648_0000183_48573_50021 454
171 3300046528 Ga0495642_0001320 Ga0495642_0001320_7001_8449 454
172 3300046528 Ga0495642_0018050 Ga0495642_0018050_1102_2550 454
173 3300046538 Ga0495609_0003222 Ga0495609_0003222_1289_2737 454
174 3300046538 Ga0495609_0017562 Ga0495609_0017562_1431_2879 454
175 3300046542 Ga0495597_0000243 Ga0495597_0000243_10392_11840 454
176 3300046542 Ga0495597_0007262 Ga0495597_0007262_962_2410 454
177 3300046542 Ga0495597_0008454 Ga0495597_0008454_2751_4199 454
178 3300046558 Ga0495633_0000671 Ga0495633_0000671_21591_23039 454
179 3300046615 Ga0495656_0033304 Ga0495656_0033304_295_1743 454
180 3300046616 Ga0495668_0007862 Ga0495668_0007862_1046_2494 454
181 3300046660 Ga0495625_0000128 Ga0495625_0000128_12979_14427 454
182 3300046660 Ga0495625_0010844 Ga0495625_0010844_1585_3033 454
183 3300046660 Ga0495625_0089607 Ga0495625_0089607_492_1940 454
184 3300046664 Ga0495659_0024608 Ga0495659_0024608_522_1970 454
185 3300046665 Ga0495661_0049760 Ga0495661_0049760_971_2419 454
186 3300046684 Ga0495669_0001566 Ga0495669_0001566_4934_6382 454
187 3300046692 Ga0495671_0002651 Ga0495671_0002651_5461_6921 454
188 3300046694 Ga0495649_0002837 Ga0495649_0002837_6975_8423 454
189 3300046794 Ga0495589_0031477 Ga0495589_0031477_205_1653 454
190 3300047320 Ga0495672_0000141 Ga0495672_0000141_56011_57459 454
191 3300047320 Ga0495672_0000264 Ga0495672_0000264_11652_13112 454
192 3300047323 Ga0495683_0005563 Ga0495683_0005563_4648_6096 454
193 3300047445 Ga0495677_0014764 Ga0495677_0014764_1087_2535 454
194 3300047469 Ga0495673_0000024 Ga0495673_0000024_99455_100909 454
195 3300048091 Ga0495626_0004451 Ga0495626_0004451_1732_3180 454
196 3300048091 Ga0495626_0017694 Ga0495626_0017694_279_1745 454
197 3300049459 Ga0495678_000101 Ga0495678_000101_47137_48585 454
198 3300053087 Ga0500643_007039 Ga0500643_007039_2480_3943 454
199 3300053094 Ga0500566_0000900 Ga0500566_0000900_222_1685 454
200 3300053118 Ga0500594_0011450 Ga0500594_0011450_346_1800 454
201 3300053134 Ga0500658_0002294 Ga0500658_0002294_3409_4872 454
202 3300053145 Ga0500586_000034 Ga0500586_000034_17249_18697 454
203 iso_pu_bacteria 2643221622 2644128817 454
204 iso_pu_bacteria 2643221645 2644250339 454
205 iso_pu_bacteria 2643221664 2644357662 454
206 iso_pu_bacteria 2738541300 2738844006 454
207 iso_pu_bacteria 2738543018 2739274430 454
208 iso_pu_bacteria 2738543030 2739343474 454
209 iso_pu_bacteria 2842711865 2842716907 454
210 iso_pu_bacteria 2857558681 2857561291 454
211 3300003775 Ga0055524_1000029 Ga0055524_1000029154 455
212 3300005458 Ga0070681_10021782 Ga0070681_100217821 455
213 3300006948 Ga0099826_10000003 Ga0099826_10000003448 455
214 3300009551 Ga0105238_10031698 Ga0105238_100316982 455
215 3300013307 Ga0157372_10048833 Ga0157372_100488331 455
216 3300025299 Ga0209256_1000013 Ga0209256_100001349 455
217 3300027666 Ga0209282_1000002 Ga0209282_1000002550 455
218 3300031251 Ga0265327_10003308 Ga0265327_100033085 455
219 3300031251 Ga0265327_10023738 Ga0265327_100237383 455
220 3300046507 Ga0495606_0000495 Ga0495606_0000495_19272_20741 455
221 3300046524 Ga0495648_0002372 Ga0495648_0002372_5483_6943 455
222 3300046692 Ga0495671_0011522 Ga0495671_0011522_628_2082 455
223 3300047320 Ga0495672_0000188 Ga0495672_0000188_59706_61166 455
224 3300047323 Ga0495683_0025317 Ga0495683_0025317_215_1675 455
225 3300053156 Ga0500622_0001681 Ga0500622_0001681_8509_9963 455
226 3300053156 Ga0500622_0003280 Ga0500622_0003280_439_1893 455
227 iso_pu_bacteria 2808606418 2809143801 455
228 3300003203 JGI25406J46586_10014146 JGI25406J46586_100141462 457
229 3300005985 Ga0081539_10000038 Ga0081539_1000003830 457
230 3300028794 Ga0307515_10002761 Ga0307515_1000276115 457
231 3300031456 Ga0307513_10097428 Ga0307513_100974282 457
232 3300053156 Ga0500622_0061421 Ga0500622_0061421_339_1826 457

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22725

GFO_IDH_MocA_C3

GFO/IDH/MocA C-terminal domain

218

313

0.91

PF02894

GFO_IDH_MocA_C

Oxidoreductase family, C-terminal alpha/beta domain

221

508

0.9

PF01408

GFO_IDH_MocA

Oxidoreductase family, NAD-binding Rossmann fold

80

209

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
3q2k-assembly1.cif.gz_E crystal structure of the wlba dehydrogenase from bordetella pertussis in complex with nadh and udp-glcnaca 0.8449 13 426
3q2k-assembly2.cif.gz_P crystal structure of the wlba dehydrogenase from bordetella pertussis in complex with nadh and udp-glcnaca 0.8353 13 426
3q2k-assembly1.cif.gz_E crystal structure of the wlba dehydrogenase from bordetella pertussis in complex with nadh and udp-glcnaca 0.8304 13 426
3wg9-assembly1.cif.gz_A crystal structure of rsp, a rex-family repressor 0.8298 13 113
3q2k-assembly2.cif.gz_L crystal structure of the wlba dehydrogenase from bordetella pertussis in complex with nadh and udp-glcnaca 0.8289 13 426
ID Description Score Start End Superfamily
af_Q2G1E5_4_119_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9192 15 136 3.40.50.720
2ixbA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9153 13 141 3.40.50.720
3db2C01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9032 13 138 3.40.50.720
af_D4A903_1_122_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8994 13 138 3.40.50.720
4n54A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8981 13 140 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2N5KD94-F1-model_v4 Dehydrogenase 0.9654 13 432 GO:0000166
AF-A0A7L5A597-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.9555 19 431 GO:0000166
AF-A0A7C5EWS2-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.9486 13 432 GO:0000166
AF-A0A4Q3NSK9-F1-model_v4 deleted 0.9423 161 431
AF-A0A7C5EWS2-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.9419 13 432 GO:0000166

Feature Viewer

pLDDT pTM Quality
91.27 0.9 High
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Predicted Structure (AlphaFold2)

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