F344530

General Info

Members Datasets Scaffolds Average Seq Length
231 176 462 384

Family's Representative Sequence

Representative Sequence 3300053151|Ga0500604_0005877|Ga0500604_0005877_1845_3098
Length 417
Sequence MAWPYRVNLGSCGKFSGINERHLATRRERVEMTLTLAAVEVDAAREALRLEVRAFLADAIASGRFVPDCDSWLTGWDPSFSVDLAARGWIGMAIPKKYGGSERGNLDRYVVIEELLAAGAPVAAHWMSDRQIAPALLRFGTEEQKRNYLPKIAAAKSFFALGMSEADAGSDLAAIRTKATKIDGGWRIEGAKLWTSGGHHADAIVMLARTSPVDPQSRHSGMSQFIVDLPHPDVTINPIRLMSGEHHFNETVFDNAFVPDDALLGAVGDGWKQVTAELAYERSGPERILSTFPLLTSLFRRVAASEQVSEAELAALGTLLSRARSLREMSMSIAGALQRGEAPDVAAAVAKDLGTRFEQDVVDTALRIFDGVLADTGSSDELERLLSRAALHSPGFTLRGGTNEILRGVVARGMGMR

Samples

Sample ID Description Type Environment
1 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
25 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
26 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
27 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
28 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
29 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
30 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
31 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
32 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
33 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
34 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
35 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
42 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
43 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
44 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
49 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300013875 Rhizosphere microbial communities from switchgrass unharvested rhizosphere in Austin, TX, USA - RS_233 Metagenome Rhizosphere
52 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
53 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
54 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
55 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
56 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
88 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
89 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
90 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
91 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
92 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
93 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
94 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
95 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
96 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
97 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
98 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
99 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
100 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
101 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
102 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
103 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
104 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
105 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
106 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
107 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
108 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
109 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
110 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
111 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
112 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
113 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
114 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
115 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
116 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
117 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
118 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
119 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
120 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
121 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
122 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
123 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
124 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
125 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
126 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
127 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
128 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
129 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
130 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
131 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
132 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
133 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
134 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
135 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
136 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
137 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
145 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
146 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
147 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
148 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
149 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
150 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
151 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
152 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
153 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
154 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
155 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
156 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
157 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
158 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
159 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
160 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
161 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
162 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
163 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
164 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
165 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
166 2857465823 Brevibacillus sp. R-74266 Isolate Unclassified
167 2857581216 Bacillus sp. R-71922 Isolate Unclassified
168 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified
169 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
170 2862574272 Streptomyces sp. AcE210 Isolate Nodule
171 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
172 2915358134 Pseudonocardia pini CAP47R Isolate Unclassified
173 3001892409 Neobacillus rhizophilus FJAT-49825 Isolate Rhizosphere
174 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
175 8054472261 Pseudonocardia terrae RS11V-5 Isolate Rhizosphere
176 8057632132 Cytobacillus kochii RZ2 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.64
Metatranscriptomes 0.87
Isolates 6.49

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.36
Nodule 0.43
Rhizoplane 6.49
Rhizosphere 70.56
Stem 0
Stem Tuber 0
Unclassified 0.43

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500604_0005877 3300053151 Bacteria 3242
2 Ga0070658_10000342 3300005327 Bacteria 40341
3 Ga0070658_10054089 3300005327 Bacteria 3259
4 Ga0070658_10060845 3300005327 Bacteria 3076
5 Ga0070676_10209559 3300005328 Bacteria 1282
6 Ga0070683_100088232 3300005329 Bacteria 2910
7 Ga0068869_100022057 3300005334 Bacteria 4384
8 Ga0070680_100001580 3300005336 Bacteria 16617
9 Ga0068868_100076417 3300005338 Bacteria 2677
10 Ga0070660_100014341 3300005339 Bacteria 5706
11 Ga0070687_100132933 3300005343 Bacteria 1439
12 Ga0070661_100028296 3300005344 Bacteria 4042
13 Ga0070671_100001478 3300005355 Bacteria 17555
14 Ga0070671_100016188 3300005355 Bacteria 6030
15 Ga0070659_100002892 3300005366 Bacteria 12222
16 Ga0070659_100240034 3300005366 Bacteria 1499
17 Ga0070667_100166316 3300005367 Bacteria 1945
18 Ga0070713_100163418 3300005436 Bacteria 1989
19 Ga0070663_100001369 3300005455 Bacteria 13348
20 Ga0070663_100002786 3300005455 Bacteria 9913
21 Ga0070662_100008725 3300005457 Bacteria 6609
22 Ga0070662_100068110 3300005457 Bacteria 2616
23 Ga0070681_10016116 3300005458 Bacteria 7450
24 Ga0070685_10064302 3300005466 Bacteria 2156
25 Ga0070685_10070215 3300005466 Bacteria 2073
26 Ga0070679_100002874 3300005530 Bacteria 15658
27 Ga0070684_100353693 3300005535 Bacteria 1351
28 Ga0070665_100000944 3300005548 Bacteria 37066
29 Ga0070665_100003247 3300005548 Bacteria 17477
30 Ga0068856_100240031 3300005614 Bacteria 1827
31 Ga0068859_100002435 3300005617 Bacteria 18946
32 Ga0068859_100005689 3300005617 Bacteria 12685
33 Ga0068851_10080239 3300005834 Bacteria 1703
34 Ga0068870_10036652 3300005840 Bacteria 2523
35 Ga0068863_100083048 3300005841 Bacteria 3035
36 Ga0068863_100083757 3300005841 Bacteria 3022
37 Ga0068863_100133793 3300005841 Bacteria 2368
38 Ga0068858_100117804 3300005842 Bacteria 2482
39 Ga0068860_100011887 3300005843 Bacteria 8582
40 Ga0068862_100000066 3300005844 Bacteria 124095
41 Ga0068862_100070734 3300005844 Bacteria 3012
42 Ga0070717_10128577 3300006028 Bacteria 2177
43 Ga0075362_10000042 3300006177 Bacteria 45768
44 Ga0075367_10155344 3300006178 Bacteria 1421
45 Ga0075369_10007018 3300006186 Bacteria 4279
46 Ga0075366_10000094 3300006195 Bacteria 35703
47 Ga0068865_100209850 3300006881 Bacteria 1517
48 Ga0097620_100002435 3300006931 Bacteria 18946
49 Ga0097620_100005689 3300006931 Bacteria 12685
50 Ga0105251_10075234 3300009011 Bacteria 1568
51 Ga0111539_10248082 3300009094 Bacteria 2073
52 Ga0111539_10274208 3300009094 Bacteria 1963
53 Ga0105247_10000209 3300009101 Bacteria 56848
54 Ga0105247_10083067 3300009101 Bacteria 2022
55 Ga0114129_10421454 3300009147 Bacteria 1755
56 Ga0105237_10163676 3300009545 Bacteria 2223
57 Ga0105238_10136712 3300009551 Bacteria 2428
58 Ga0105249_10042954 3300009553 Bacteria 4111
59 Ga0099796_10076631 3300010159 Bacteria 1218
60 Ga0105239_10018549 3300010375 Bacteria 7685
61 Ga0105239_10102301 3300010375 Bacteria 3171
62 Ga0157369_10037876 3300013105 Bacteria 5276
63 Ga0157374_10083225 3300013296 Bacteria 3040
64 Ga0157378_10269869 3300013297 Bacteria 1636
65 Ga0163162_10223776 3300013306 Bacteria 2011
66 Ga0157372_10264235 3300013307 Bacteria 1998
67 Ga0157515_139986 3300013875 Bacteria 1238
68 Ga0163163_10023867 3300014325 Bacteria 5813
69 Ga0163163_10088042 3300014325 Bacteria 3116
70 Ga0157379_10089965 3300014968 Bacteria 2754
71 Ga0157379_10391347 3300014968 Bacteria 1277
72 Ga0206356_10218286 3300020070 Bacteria 1822
73 Ga0206353_10366381 3300020082 Bacteria 7894
74 Ga0207656_10087246 3300025321 Bacteria 1411
75 Ga0207710_10000449 3300025900 Bacteria 26704
76 Ga0207710_10000556 3300025900 Bacteria 22299
77 Ga0207710_10000571 3300025900 Bacteria 22034
78 Ga0207688_10005266 3300025901 Bacteria 7025
79 Ga0207647_10093522 3300025904 Bacteria 1791
80 Ga0207705_10000597 3300025909 Bacteria 30220
81 Ga0207707_10011354 3300025912 Bacteria 7755
82 Ga0207660_10000164 3300025917 Bacteria 41667
83 Ga0207662_10077713 3300025918 Bacteria 2019
84 Ga0207657_10005235 3300025919 Bacteria 13590
85 Ga0207657_10045558 3300025919 Bacteria 3848
86 Ga0207652_10000702 3300025921 Bacteria 32441
87 Ga0207659_10240105 3300025926 Bacteria 1465
88 Ga0207644_10001635 3300025931 Bacteria 14435
89 Ga0207690_10053573 3300025932 Bacteria 2708
90 Ga0207690_10123863 3300025932 Bacteria 1882
91 Ga0207706_10003655 3300025933 Bacteria 14693
92 Ga0207706_10009914 3300025933 Bacteria 8735
93 Ga0207691_10041589 3300025940 Bacteria 4242
94 Ga0207711_10001871 3300025941 Bacteria 19185
95 Ga0207711_10045494 3300025941 Bacteria 3751
96 Ga0207689_10028434 3300025942 Bacteria 4678
97 Ga0207661_10312825 3300025944 Bacteria 1410
98 Ga0207667_10259576 3300025949 Bacteria 1777
99 Ga0207712_10040962 3300025961 Bacteria 3181
100 Ga0207658_10187570 3300025986 Bacteria 1716
101 Ga0207703_10000071 3300026035 Bacteria 121299
102 Ga0207678_10000480 3300026067 Bacteria 36254
103 Ga0207678_10002741 3300026067 Bacteria 15955
104 Ga0207678_10088322 3300026067 Bacteria 2649
105 Ga0207641_10226198 3300026088 Bacteria 1737
106 Ga0207641_10326066 3300026088 Bacteria 1457
107 Ga0207648_10029172 3300026089 Bacteria 4893
108 Ga0207674_10155793 3300026116 Bacteria 2240
109 Ga0207674_10256012 3300026116 Bacteria 1697
110 Ga0207675_100056055 3300026118 Bacteria 3677
111 Ga0207683_10119946 3300026121 Bacteria 2360
112 Ga0207683_10149126 3300026121 Bacteria 2110
113 Ga0268266_10004289 3300028379 Bacteria 13724
114 Ga0268266_10085024 3300028379 Bacteria 2763
115 Ga0268265_10000062 3300028380 Bacteria 148317
116 Ga0268264_10011646 3300028381 Bacteria 7254
117 Ga0307511_10005344 3300030521 Bacteria 13068
118 Ga0307511_10015708 3300030521 Bacteria 7322
119 Ga0307513_10001050 3300031456 Bacteria 40130
120 Ga0307509_10000212 3300031507 Bacteria 92922
121 Ga0307508_10076543 3300031616 Bacteria 2924
122 Ga0307516_10000002 3300031730 Bacteria 467851
123 Ga0307516_10000999 3300031730 Bacteria 39119
124 Ga0307516_10004140 3300031730 Bacteria 18088
125 Ga0307405_10083196 3300031731 Bacteria 2097
126 Ga0307413_10061559 3300031824 Bacteria 2317
127 Ga0307410_10017286 3300031852 Bacteria 4327
128 Ga0307406_10119543 3300031901 Bacteria 1829
129 Ga0307416_100029501 3300032002 Bacteria 4099
130 Ga0307416_100107325 3300032002 Bacteria 2450
131 Ga0307416_100158942 3300032002 Bacteria 2085
132 Ga0307415_100041724 3300032126 Bacteria 3049
133 Ga0307510_10085958 3300033180 Bacteria 3019
134 Ga0373943_0127166 3300035170 Bacteria 1360
135 Ga0436364_0544103 3300037853 Bacteria 2085
136 Ga0436365_0225809 3300039437 Bacteria 4055
137 Ga0466972_0008645 3300044658 Bacteria 5107
138 Ga0466972_0036145 3300044658 Bacteria 2418
139 Ga0466965_0008013 3300044683 Bacteria 4875
140 Ga0466965_0016911 3300044683 Bacteria 3479
141 Ga0466966_0144599 3300044684 Bacteria 1452
142 Ga0466961_0121601 3300044693 Bacteria 1639
143 Ga0466963_0024564 3300044694 Bacteria 3837
144 Ga0466963_0049807 3300044694 Bacteria 2771
145 Ga0466963_0165762 3300044694 Bacteria 1539
146 Ga0466963_0228512 3300044694 Bacteria 1304
147 Ga0466970_0014812 3300044765 Bacteria 4008
148 Ga0466970_0076798 3300044765 Bacteria 1800
149 Ga0466959_0041855 3300045049 Bacteria 3381
150 Ga0466958_0146532 3300045836 Bacteria 1488
151 Ga0466967_0088899 3300045976 Bacteria 2804
152 Ga0466967_0109539 3300045976 Bacteria 2536
153 Ga0495643_0026424 3300046522 Unclassified 3277
154 Ga0495622_0012684 3300046557 Bacteria 3906
155 Ga0495672_0016831 3300047320 Bacteria 4907
156 Ga0495672_0051459 3300047320 Bacteria 2426
157 Ga0495681_0000686 3300047470 Bacteria 25785
158 Ga0496100_0040864 3300048903 Bacteria 2953
159 Ga0496102_0000046 3300048905 Bacteria 184899
160 Ga0496102_0040372 3300048905 Bacteria 4221
161 Ga0496103_0000011 3300048906 Bacteria 304506
162 Ga0496103_0172210 3300048906 Bacteria 1390
163 Ga0496104_0073252 3300048907 Bacteria 3258
164 Ga0496104_0079476 3300048907 Bacteria 3126
165 Ga0496105_0064343 3300048908 Bacteria 3026
166 Ga0496106_0039192 3300048909 Bacteria 3549
167 Ga0496107_0121754 3300048910 Bacteria 1922
168 Ga0496108_0199295 3300048911 Bacteria 1737
169 Ga0496109_0126645 3300048912 Bacteria 2382
170 Ga0496110_0474302 3300048913 Bacteria 1140
171 Ga0496112_0018256 3300048915 Bacteria 6604
172 Ga0496113_0205158 3300048916 Bacteria 1568
173 Ga0496116_0000328 3300048919 Bacteria 76892
174 Ga0496116_0000479 3300048919 Bacteria 55101
175 Ga0496117_0000109 3300048920 Bacteria 184635
176 Ga0496118_0000132 3300048921 Bacteria 131401
177 Ga0496119_0001399 3300048922 Bacteria 29247
178 Ga0496119_0011316 3300048922 Bacteria 7407
179 Ga0496119_0015600 3300048922 Bacteria 5835
180 Ga0496120_0000394 3300048923 Bacteria 70310
181 Ga0496120_0003088 3300048923 Bacteria 15698
182 Ga0496121_0008700 3300048924 Bacteria 11853
183 Ga0496121_0057308 3300048924 Bacteria 3230
184 Ga0496121_0064795 3300048924 Bacteria 2977
185 Ga0496122_0001109 3300048925 Bacteria 46501
186 Ga0496123_0002239 3300048926 Bacteria 24501
187 Ga0496124_0009024 3300048927 Bacteria 10316
188 Ga0496126_0000345 3300048929 Bacteria 97255
189 Ga0496126_0001481 3300048929 Bacteria 36491
190 Ga0501036_0204943 3300049572 Bacteria 1658
191 Ga0501038_0003336 3300049574 Bacteria 14972
192 Ga0501040_0003646 3300049576 Bacteria 9968
193 Ga0501041_0005494 3300049577 Bacteria 7418
194 Ga0501042_0000644 3300049578 Bacteria 18689
195 Ga0501043_0210704 3300049579 Bacteria 1506
196 Ga0501047_0123380 3300049581 Bacteria 2471
197 Ga0501071_0021161 3300049587 Bacteria 4530
198 Ga0501077_0046946 3300049593 Bacteria 2744
199 Ga0501080_0231315 3300049742 Bacteria 1690
200 Ga0501081_0112204 3300049743 Bacteria 1935
201 nmdc:mga03683_101_c1 3300050489 Bacteria 30017
202 nmdc:mga0k408_5_c2 3300050493 Bacteria 142245
203 nmdc:mga07m45_26_c1 3300050496 Bacteria 94168
204 nmdc:mga05p37_396757_c1 3300050507 Bacteria 1612
205 nmdc:mga08y16_324645_c1 3300050511 Bacteria 1584
206 nmdc:mga0sz30_7582_c1 3300050516 Bacteria 4074
207 Ga0500643_000597 3300053087 Bacteria 24714
208 Ga0500643_002876 3300053087 Bacteria 8577
209 Ga0500562_005523 3300053108 Bacteria 3175
210 Ga0500559_0011733 3300053136 Bacteria 3736
211 Ga0500622_0000617 3300053156 Bacteria 32186
212 Ga0500637_0018584 3300053178 Bacteria 3737
213 Ga0500570_000037 3300053724 Bacteria 33844
214 Ga0500596_000506 3300053735 Bacteria 7345
215 Ga0501084_0000150 3300054114 Bacteria 53012
216 Ga0501082_0022640 3300060353 Bacteria 5412
217 2558908529 2558860112 Bacteria 9931328
218 2816510326 2816332139 Bacteria 9138787
219 2819745467 2818991472 Bacteria 10089953
220 2857467275 2857465823 Bacteria 6772595
221 2857581752 2857581216 Bacteria 5522813
222 2857592068 2857591370 Bacteria 6569758
223 2862178823 2862178590 Bacteria 8583590
224 2862580239 2862574272 Bacteria 10567477
225 2870785348 2870782633 Bacteria 9624083
226 2915360325 2915358134 Bacteria 6050864
227 3001892981 3001892409 Bacteria 6328293
228 3001896239 3001892409 Bacteria 6328293
229 8025484013 8025478263 Bacteria 8209203
230 8054474057 8054472261 Bacteria 7464355
231 8057634372 8057632132 Bacteria 4726859
232 Ga0500604_0005877
233 Ga0070658_10000342
234 Ga0070658_10054089
235 Ga0070658_10060845
236 Ga0070676_10209559
237 Ga0070683_100088232
238 Ga0068869_100022057
239 Ga0070680_100001580
240 Ga0068868_100076417
241 Ga0070660_100014341
242 Ga0070687_100132933
243 Ga0070661_100028296
244 Ga0070671_100001478
245 Ga0070671_100016188
246 Ga0070659_100002892
247 Ga0070659_100240034
248 Ga0070667_100166316
249 Ga0070713_100163418
250 Ga0070663_100001369
251 Ga0070663_100002786
252 Ga0070662_100008725
253 Ga0070662_100068110
254 Ga0070681_10016116
255 Ga0070685_10064302
256 Ga0070685_10070215
257 Ga0070679_100002874
258 Ga0070684_100353693
259 Ga0070665_100000944
260 Ga0070665_100003247
261 Ga0068856_100240031
262 Ga0068859_100002435
263 Ga0068859_100005689
264 Ga0068851_10080239
265 Ga0068870_10036652
266 Ga0068863_100083048
267 Ga0068863_100083757
268 Ga0068863_100133793
269 Ga0068858_100117804
270 Ga0068860_100011887
271 Ga0068862_100000066
272 Ga0068862_100070734
273 Ga0070717_10128577
274 Ga0075362_10000042
275 Ga0075367_10155344
276 Ga0075369_10007018
277 Ga0075366_10000094
278 Ga0068865_100209850
279 Ga0097620_100002435
280 Ga0097620_100005689
281 Ga0105251_10075234
282 Ga0111539_10248082
283 Ga0111539_10274208
284 Ga0105247_10000209
285 Ga0105247_10083067
286 Ga0114129_10421454
287 Ga0105237_10163676
288 Ga0105238_10136712
289 Ga0105249_10042954
290 Ga0099796_10076631
291 Ga0105239_10018549
292 Ga0105239_10102301
293 Ga0157369_10037876
294 Ga0157374_10083225
295 Ga0157378_10269869
296 Ga0163162_10223776
297 Ga0157372_10264235
298 Ga0157515_139986
299 Ga0163163_10023867
300 Ga0163163_10088042
301 Ga0157379_10089965
302 Ga0157379_10391347
303 Ga0206356_10218286
304 Ga0206353_10366381
305 Ga0207656_10087246
306 Ga0207710_10000449
307 Ga0207710_10000556
308 Ga0207710_10000571
309 Ga0207688_10005266
310 Ga0207647_10093522
311 Ga0207705_10000597
312 Ga0207707_10011354
313 Ga0207660_10000164
314 Ga0207662_10077713
315 Ga0207657_10005235
316 Ga0207657_10045558
317 Ga0207652_10000702
318 Ga0207659_10240105
319 Ga0207644_10001635
320 Ga0207690_10053573
321 Ga0207690_10123863
322 Ga0207706_10003655
323 Ga0207706_10009914
324 Ga0207691_10041589
325 Ga0207711_10001871
326 Ga0207711_10045494
327 Ga0207689_10028434
328 Ga0207661_10312825
329 Ga0207667_10259576
330 Ga0207712_10040962
331 Ga0207658_10187570
332 Ga0207703_10000071
333 Ga0207678_10000480
334 Ga0207678_10002741
335 Ga0207678_10088322
336 Ga0207641_10226198
337 Ga0207641_10326066
338 Ga0207648_10029172
339 Ga0207674_10155793
340 Ga0207674_10256012
341 Ga0207675_100056055
342 Ga0207683_10119946
343 Ga0207683_10149126
344 Ga0268266_10004289
345 Ga0268266_10085024
346 Ga0268265_10000062
347 Ga0268264_10011646
348 Ga0307511_10005344
349 Ga0307511_10015708
350 Ga0307513_10001050
351 Ga0307509_10000212
352 Ga0307508_10076543
353 Ga0307516_10000002
354 Ga0307516_10000999
355 Ga0307516_10004140
356 Ga0307405_10083196
357 Ga0307413_10061559
358 Ga0307410_10017286
359 Ga0307406_10119543
360 Ga0307416_100029501
361 Ga0307416_100107325
362 Ga0307416_100158942
363 Ga0307415_100041724
364 Ga0307510_10085958
365 Ga0373943_0127166
366 Ga0436364_0544103
367 Ga0436365_0225809
368 Ga0466972_0008645
369 Ga0466972_0036145
370 Ga0466965_0008013
371 Ga0466965_0016911
372 Ga0466966_0144599
373 Ga0466961_0121601
374 Ga0466963_0024564
375 Ga0466963_0049807
376 Ga0466963_0165762
377 Ga0466963_0228512
378 Ga0466970_0014812
379 Ga0466970_0076798
380 Ga0466959_0041855
381 Ga0466958_0146532
382 Ga0466967_0088899
383 Ga0466967_0109539
384 Ga0495643_0026424
385 Ga0495622_0012684
386 Ga0495672_0016831
387 Ga0495672_0051459
388 Ga0495681_0000686
389 Ga0496100_0040864
390 Ga0496102_0000046
391 Ga0496102_0040372
392 Ga0496103_0000011
393 Ga0496103_0172210
394 Ga0496104_0073252
395 Ga0496104_0079476
396 Ga0496105_0064343
397 Ga0496106_0039192
398 Ga0496107_0121754
399 Ga0496108_0199295
400 Ga0496109_0126645
401 Ga0496110_0474302
402 Ga0496112_0018256
403 Ga0496113_0205158
404 Ga0496116_0000328
405 Ga0496116_0000479
406 Ga0496117_0000109
407 Ga0496118_0000132
408 Ga0496119_0001399
409 Ga0496119_0011316
410 Ga0496119_0015600
411 Ga0496120_0000394
412 Ga0496120_0003088
413 Ga0496121_0008700
414 Ga0496121_0057308
415 Ga0496121_0064795
416 Ga0496122_0001109
417 Ga0496123_0002239
418 Ga0496124_0009024
419 Ga0496126_0000345
420 Ga0496126_0001481
421 Ga0501036_0204943
422 Ga0501038_0003336
423 Ga0501040_0003646
424 Ga0501041_0005494
425 Ga0501042_0000644
426 Ga0501043_0210704
427 Ga0501047_0123380
428 Ga0501071_0021161
429 Ga0501077_0046946
430 Ga0501080_0231315
431 Ga0501081_0112204
432 nmdc:mga03683_101_c1
433 nmdc:mga0k408_5_c2
434 nmdc:mga07m45_26_c1
435 nmdc:mga05p37_396757_c1
436 nmdc:mga08y16_324645_c1
437 nmdc:mga0sz30_7582_c1
438 Ga0500643_000597
439 Ga0500643_002876
440 Ga0500562_005523
441 Ga0500559_0011733
442 Ga0500622_0000617
443 Ga0500637_0018584
444 Ga0500570_000037
445 Ga0500596_000506
446 Ga0501084_0000150
447 Ga0501082_0022640
448 2558908529
449 2816510326
450 2819745467
451 2857467275
452 2857581752
453 2857592068
454 2862178823
455 2862580239
456 2870785348
457 2915360325
458 3001892981
459 3001896239
460 8025484013
461 8054474057
462 8057634372

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02770

Acyl-CoA_dh_M

Acyl-CoA dehydrogenase, middle domain

160

256

0.87

PF02771

Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

42

156

0.87

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

296

415

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
8hk0-assembly1.cif.gz_A crystal structure of fic32-33 complex from streptomyces ficellus nrrl 8067 0.8706 12 381
8hk0-assembly1.cif.gz_B crystal structure of fic32-33 complex from streptomyces ficellus nrrl 8067 0.8703 12 382
8hk0-assembly1.cif.gz_A crystal structure of fic32-33 complex from streptomyces ficellus nrrl 8067 0.8596 12 381
7y0a-assembly1.cif.gz_B crystal structure of human short-chain acyl-coa dehydrogenase 0.8494 11 387
6wy8-assembly1.cif.gz_D tcur3481-tcur3483 steroid acad 0.8491 12 385
ID Description Score Start End Superfamily
af_P96855_462_572_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.967 133 243 2.40.110.10
af_P96855_462_572_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9502 133 243 2.40.110.10
4x28B02 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9302 129 237 2.40.110.10
2pg0A02 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9254 132 237 2.40.110.10
4ktoC02 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9173 132 246 2.40.110.10
ID Description Score Start End GO Terms
AF-A0A353HX35-F1-model_v4 Acyl-CoA dehydrogenase 0.9659 147 247 GO:0005886
GO:0016627
AF-A0A1W9ZWS8-F1-model_v4 Acyl-CoA dehydrogenase 0.9564 1 386 GO:0003995
GO:0005886
GO:0050660
AF-A0A355SPG1-F1-model_v4 deleted 0.9531 123 227
AF-A0A1W9ZWS8-F1-model_v4 Acyl-CoA dehydrogenase 0.9516 1 386 GO:0003995
GO:0005886
GO:0050660
AF-A0A7X0KEM1-F1-model_v4 deleted 0.9513 12 381

Map