F344514

General Info

Members Datasets Scaffolds Average Seq Length
231 128 462 286

Family's Representative Sequence

Representative Sequence 3300050515|nmdc:mga0a205_30300_c1|nmdc:mga0a205_30300_c1_2091_3050
Length 319
Sequence VFVRKISRAKTQRRKALPRYSGFFAVFAALREKHFMKLAFSTLGCPDWDLDTIIRAARKFGYEGIELRALAGNLDLLNRAEFAAPQLVQTKASFEDEGIEICCVDTSCTFHSPDASERANQVKIALDHAELAAKLCAPLIRVFPDKIQPGAQRDETRDWIAECLRAVAEQMPDSVDLGLETHGDFANTEAAAEIVKLANHAKVKLIWDVANSVAAGDTIEQAGRVVQPYLAHIHLRDAKPVTGSEHWLPVLAGHGHVSFAKALAVIGELNYDGYVSFEWEKYWRPEIEEPEVALPDFTNAIRNLVEERSDTTECSGVGK

Samples

Sample ID Description Type Environment
1 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
6 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
13 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
14 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
15 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
16 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
17 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
22 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
23 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
24 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
25 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
26 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
27 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
28 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
29 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
30 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
31 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
32 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
33 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
34 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
35 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
36 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
37 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
38 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
39 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
40 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
41 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
42 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
43 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
44 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
45 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
46 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
47 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
48 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
49 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
50 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
51 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
52 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
53 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
54 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
55 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
57 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
58 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
59 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
60 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
61 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
62 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
63 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
64 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
65 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
66 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
67 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
68 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
69 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
70 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
71 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
72 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
73 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
74 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
75 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
76 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
77 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
78 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
79 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
80 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
81 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
82 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
83 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
84 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
85 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
118 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
119 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
120 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
121 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
122 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
123 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
124 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
125 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
126 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
127 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
128 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.73
Rhizosphere 97.84
Stem 0
Stem Tuber 0
Unclassified 18.18

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga0a205_30300_c1 3300050515 Bacteria 5179
2 rootL2_10066249 3300003322 Unclassified 2427
3 Ga0065714_10064428 3300005288 Bacteria 144890
4 Ga0065704_10082999 3300005289 Bacteria 3514
5 Ga0065712_10000115 3300005290 Bacteria 144502
6 Ga0065715_10003032 3300005293 Bacteria 5905
7 Ga0065715_10101743 3300005293 Unclassified 3175
8 Ga0065707_10177117 3300005295 Bacteria 1431
9 Ga0070690_100079942 3300005330 Bacteria 2138
10 Ga0070670_100042585 3300005331 Bacteria 3903
11 Ga0070670_100082460 3300005331 Bacteria 2763
12 Ga0068869_100109868 3300005334 Bacteria 2096
13 Ga0070666_10032369 3300005335 Bacteria 3454
14 Ga0070680_100002897 3300005336 Bacteria 12745
15 Ga0070682_100005421 3300005337 Bacteria 7105
16 Ga0070689_100418785 3300005340 Unclassified 1135
17 Ga0070687_100091613 3300005343 Unclassified 1683
18 Ga0070692_10012692 3300005345 Bacteria 3910
19 Ga0070675_100348369 3300005354 Bacteria 1313
20 Ga0070671_100119715 3300005355 Unclassified 2215
21 Ga0070674_100297573 3300005356 Bacteria 1285
22 Ga0070667_100132879 3300005367 Bacteria 2174
23 Ga0070703_10001097 3300005406 Bacteria 8411
24 Ga0070701_10097312 3300005438 Bacteria 1624
25 Ga0070705_100098874 3300005440 Bacteria 1837
26 Ga0070705_100101453 3300005440 Bacteria 1818
27 Ga0070705_100157633 3300005440 Bacteria 1514
28 Ga0070700_100043279 3300005441 Unclassified 2769
29 Ga0070700_100117460 3300005441 Bacteria 1777
30 Ga0070694_100029696 3300005444 Bacteria 3570
31 Ga0070694_100045445 3300005444 Bacteria 2943
32 Ga0070694_100080953 3300005444 Bacteria 2258
33 Ga0070694_100293484 3300005444 Bacteria 1244
34 Ga0070662_100059565 3300005457 Bacteria 2782
35 Ga0070681_10037049 3300005458 Bacteria 4895
36 Ga0068867_100293827 3300005459 Bacteria 1337
37 Ga0070707_100038528 3300005468 Bacteria 4566
38 Ga0070698_100114517 3300005471 Bacteria 2661
39 Ga0070699_100016094 3300005518 Bacteria 6420
40 Ga0070679_100000024 3300005530 Bacteria 121394
41 Ga0068853_100018612 3300005539 Bacteria 5751
42 Ga0068853_100213222 3300005539 Unclassified 1761
43 Ga0068853_100399606 3300005539 Bacteria 1286
44 Ga0070686_100282862 3300005544 Bacteria 1224
45 Ga0070695_100088015 3300005545 Bacteria 2067
46 Ga0070695_100195350 3300005545 Unclassified 1443
47 Ga0070695_100253562 3300005545 Bacteria 1282
48 Ga0070696_100100403 3300005546 Bacteria 2073
49 Ga0070696_100142158 3300005546 Unclassified 1755
50 Ga0070696_100587767 3300005546 Unclassified 896
51 Ga0070693_100069937 3300005547 Bacteria 2064
52 Ga0070693_100087538 3300005547 Unclassified 1871
53 Ga0070693_100325700 3300005547 Bacteria 1044
54 Ga0070704_100134051 3300005549 Bacteria 1924
55 Ga0068855_100684270 3300005563 Bacteria 1099
56 Ga0070664_100127535 3300005564 Bacteria 2233
57 Ga0070664_100195342 3300005564 Bacteria 1804
58 Ga0068857_100008756 3300005577 Bacteria 8765
59 Ga0068857_100075893 3300005577 Bacteria 2997
60 Ga0068857_100082391 3300005577 Bacteria 2874
61 Ga0068857_100143464 3300005577 Bacteria 2160
62 Ga0068856_100069126 3300005614 Bacteria 3492
63 Ga0070702_100010902 3300005615 Bacteria 4499
64 Ga0068852_100428377 3300005616 Bacteria 1306
65 Ga0068859_100028044 3300005617 Bacteria 5647
66 Ga0068859_100035655 3300005617 Bacteria 4991
67 Ga0068859_100092965 3300005617 Bacteria 3068
68 Ga0068859_100100699 3300005617 Bacteria 2945
69 Ga0068859_100504584 3300005617 Unclassified 1305
70 Ga0068864_100020345 3300005618 Bacteria 5552
71 Ga0068864_100044484 3300005618 Bacteria 3806
72 Ga0068864_100063853 3300005618 Bacteria 3192
73 Ga0068864_100112095 3300005618 Bacteria 2431
74 Ga0068864_100116984 3300005618 Bacteria 2379
75 Ga0068864_100151715 3300005618 Bacteria 2099
76 Ga0068864_100173304 3300005618 Bacteria 1969
77 Ga0068861_100025052 3300005719 Bacteria 4321
78 Ga0068851_10009648 3300005834 Bacteria 4494
79 Ga0068870_10061252 3300005840 Unclassified 2022
80 Ga0068863_100018832 3300005841 Bacteria 6606
81 Ga0068863_100294250 3300005841 Bacteria 1574
82 Ga0068863_100421918 3300005841 Unclassified 1307
83 Ga0068858_100040084 3300005842 Unclassified 4343
84 Ga0068858_100093535 3300005842 Bacteria 2799
85 Ga0068858_100212774 3300005842 Bacteria 1829
86 Ga0068860_100007661 3300005843 Bacteria 10800
87 Ga0068860_100145263 3300005843 Bacteria 2282
88 Ga0081539_10000043 3300005985 Bacteria 288108
89 Ga0081539_10007178 3300005985 Bacteria 10269
90 Ga0070716_100086788 3300006173 Bacteria 1883
91 Ga0097621_100010726 3300006237 Bacteria 6718
92 Ga0097621_100492243 3300006237 Bacteria 1110
93 Ga0068871_100032295 3300006358 Bacteria 4134
94 Ga0068871_100102896 3300006358 Unclassified 2394
95 Ga0068871_100149947 3300006358 Bacteria 1988
96 Ga0075428_100507827 3300006844 Bacteria 1290
97 Ga0075431_100198229 3300006847 Bacteria 2055
98 Ga0075431_100327547 3300006847 Bacteria 1543
99 Ga0075433_10003126 3300006852 Bacteria 12751
100 Ga0075433_10208379 3300006852 Bacteria 1738
101 Ga0075434_100120912 3300006871 Bacteria 2634
102 Ga0075434_100162438 3300006871 Bacteria 2253
103 Ga0075429_100185159 3300006880 Bacteria 1824
104 Ga0097620_100005491 3300006931 Bacteria 12908
105 Ga0097620_100028044 3300006931 Bacteria 5647
106 Ga0097620_100035656 3300006931 Bacteria 4991
107 Ga0097620_100092962 3300006931 Bacteria 3068
108 Ga0097620_100100712 3300006931 Bacteria 2945
109 Ga0097620_100504501 3300006931 Bacteria 1305
110 Ga0075435_100550661 3300007076 Bacteria 999
111 Ga0111539_10057789 3300009094 Unclassified 4605
112 Ga0111539_10097103 3300009094 Unclassified 3461
113 Ga0111539_10211483 3300009094 Unclassified 2260
114 Ga0105247_10017529 3300009101 Bacteria 4295
115 Ga0105247_10120257 3300009101 Bacteria 1701
116 Ga0114129_10052660 3300009147 Bacteria 5713
117 Ga0114129_10412809 3300009147 Bacteria 1777
118 Ga0105243_10014847 3300009148 Bacteria 5893
119 Ga0105241_10021842 3300009174 Bacteria 4737
120 Ga0105241_10416175 3300009174 Bacteria 1182
121 Ga0105241_10709387 3300009174 Bacteria 919
122 Ga0105242_10029701 3300009176 Bacteria 4360
123 Ga0105248_10007065 3300009177 Bacteria 12300
124 Ga0105248_10041604 3300009177 Bacteria 5152
125 Ga0105248_10099082 3300009177 Bacteria 3284
126 Ga0105248_10177772 3300009177 Bacteria 2398
127 Ga0105248_10444859 3300009177 Bacteria 1460
128 Ga0105237_10112435 3300009545 Bacteria 2715
129 Ga0105249_10074532 3300009553 Bacteria 3141
130 Ga0105239_10172352 3300010375 Bacteria 2420
131 Ga0105246_10007592 3300011119 Bacteria 6649
132 Ga0105246_10011662 3300011119 Bacteria 5460
133 Ga0105246_10047384 3300011119 Bacteria 2935
134 Ga0105246_10120533 3300011119 Unclassified 1943
135 Ga0105246_10425746 3300011119 Bacteria 1109
136 Ga0157373_10002359 3300013100 Bacteria 14329
137 Ga0157373_10210600 3300013100 Bacteria 1371
138 Ga0157374_10183765 3300013296 Bacteria 2043
139 Ga0157378_10005454 3300013297 Bacteria 11140
140 Ga0157378_10154025 3300013297 Bacteria 2144
141 Ga0157378_10202466 3300013297 Unclassified 1878
142 Ga0163162_10005567 3300013306 Bacteria 12188
143 Ga0163162_10035653 3300013306 Bacteria 4956
144 Ga0163162_10223457 3300013306 Bacteria 2013
145 Ga0163162_10684422 3300013306 Bacteria 1148
146 Ga0157372_10152234 3300013307 Unclassified 2670
147 Ga0157375_10215898 3300013308 Unclassified 2076
148 Ga0163163_10005524 3300014325 Bacteria 10945
149 Ga0163163_10150118 3300014325 Bacteria 2375
150 Ga0163163_10202276 3300014325 Bacteria 2035
151 Ga0157380_10238350 3300014326 Bacteria 1639
152 Ga0157379_10072738 3300014968 Bacteria 3076
153 Ga0157376_10314641 3300014969 Bacteria 1486
154 Ga0207653_10002633 3300025885 Bacteria 5698
155 Ga0207710_10039154 3300025900 Bacteria 2097
156 Ga0207680_10072359 3300025903 Bacteria 2140
157 Ga0207647_10070648 3300025904 Bacteria 2108
158 Ga0207643_10001447 3300025908 Bacteria 13632
159 Ga0207643_10014797 3300025908 Bacteria 4243
160 Ga0207654_10108698 3300025911 Bacteria 1721
161 Ga0207707_10000188 3300025912 Bacteria 65222
162 Ga0207707_10432788 3300025912 Bacteria 1127
163 Ga0207671_10006445 3300025914 Bacteria 10446
164 Ga0207671_10291266 3300025914 Unclassified 1289
165 Ga0207660_10000403 3300025917 Bacteria 28503
166 Ga0207660_10099355 3300025917 Unclassified 2171
167 Ga0207660_10312040 3300025917 Unclassified 1254
168 Ga0207652_10001088 3300025921 Bacteria 24610
169 Ga0207687_10203362 3300025927 Unclassified 1549
170 Ga0207706_10020273 3300025933 Bacteria 5976
171 Ga0207686_10154507 3300025934 Bacteria 1601
172 Ga0207709_10106620 3300025935 Unclassified 1864
173 Ga0207670_10005206 3300025936 Bacteria 7113
174 Ga0207704_10523157 3300025938 Unclassified 960
175 Ga0207665_10114975 3300025939 Bacteria 1895
176 Ga0207691_10049680 3300025940 Bacteria 3843
177 Ga0207711_10018204 3300025941 Bacteria 5840
178 Ga0207711_10029916 3300025941 Bacteria 4594
179 Ga0207711_10044647 3300025941 Bacteria 3783
180 Ga0207711_10435761 3300025941 Bacteria 1220
181 Ga0207689_10003167 3300025942 Bacteria 15083
182 Ga0207689_10022790 3300025942 Bacteria 5262
183 Ga0207689_10139076 3300025942 Unclassified 2000
184 Ga0207689_10381227 3300025942 Unclassified 1174
185 Ga0207651_10065899 3300025960 Bacteria 2542
186 Ga0207651_10110047 3300025960 Unclassified 2066
187 Ga0207651_10235744 3300025960 Bacteria 1489
188 Ga0207640_10139556 3300025981 Bacteria 1765
189 Ga0207640_10202883 3300025981 Unclassified 1504
190 Ga0207640_10447876 3300025981 Unclassified 1063
191 Ga0207703_10394569 3300026035 Bacteria 1283
192 Ga0207703_10809843 3300026035 Unclassified 894
193 Ga0207639_10079352 3300026041 Bacteria 2594
194 Ga0207639_10100770 3300026041 Unclassified 2334
195 Ga0207641_10167070 3300026088 Bacteria 2005
196 Ga0207648_10010987 3300026089 Bacteria 8552
197 Ga0207648_10224828 3300026089 Unclassified 1669
198 Ga0207676_10002012 3300026095 Bacteria 14807
199 Ga0207676_10048732 3300026095 Bacteria 3290
200 Ga0207676_10055153 3300026095 Bacteria 3118
201 Ga0207676_10088848 3300026095 Bacteria 2531
202 Ga0207676_10158075 3300026095 Bacteria 1960
203 Ga0207674_10012256 3300026116 Bacteria 9588
204 Ga0207674_10064821 3300026116 Bacteria 3684
205 Ga0207674_10076163 3300026116 Unclassified 3364
206 Ga0207674_10111546 3300026116 Bacteria 2709
207 Ga0207674_10410994 3300026116 Bacteria 1308
208 Ga0207675_100025058 3300026118 Bacteria 5552
209 Ga0207675_100068758 3300026118 Unclassified 3310
210 Ga0207675_100084397 3300026118 Bacteria 2980
211 Ga0207683_10227934 3300026121 Bacteria 1699
212 Ga0207698_10066927 3300026142 Bacteria 2831
213 Ga0268264_10011513 3300028381 Bacteria 7307
214 Ga0268264_10130910 3300028381 Bacteria 2224
215 Ga0268264_10509550 3300028381 Bacteria 1175
216 Ga0373939_0106574 3300035114 Unclassified 970
217 Ga0242420_003639 3300038996 Unclassified 2286
218 Ga0495658_0079183 3300046683 Bacteria 1925
219 Ga0496104_0077744 3300048907 Bacteria 3162
220 Ga0496108_0048914 3300048911 Bacteria 3536
221 Ga0496112_0138770 3300048915 Unclassified 2401
222 Ga0496112_0499654 3300048915 Bacteria 1152
223 nmdc:mga05p37_27645_c1 3300050507 Bacteria 6909
224 nmdc:mga09592_142369_c1 3300050508 Bacteria 2067
225 nmdc:mga0qj67_244834_c1 3300050509 Bacteria 1455
226 nmdc:mga06r32_80644_c1 3300050510 Bacteria 3167
227 nmdc:mga08y16_189272_c1 3300050511 Bacteria 2135
228 nmdc:mga08y16_31626_c1 3300050511 Bacteria 5566
229 nmdc:mga0n895_41414_c1 3300050512 Bacteria 4478
230 nmdc:mga0a205_10688_c1 3300050515 Bacteria 8438
231 nmdc:mga0a205_207589_c1 3300050515 Bacteria 1848
232 nmdc:mga0a205_30300_c1
233 rootL2_10066249
234 Ga0065714_10064428
235 Ga0065704_10082999
236 Ga0065712_10000115
237 Ga0065715_10003032
238 Ga0065715_10101743
239 Ga0065707_10177117
240 Ga0070690_100079942
241 Ga0070670_100042585
242 Ga0070670_100082460
243 Ga0068869_100109868
244 Ga0070666_10032369
245 Ga0070680_100002897
246 Ga0070682_100005421
247 Ga0070689_100418785
248 Ga0070687_100091613
249 Ga0070692_10012692
250 Ga0070675_100348369
251 Ga0070671_100119715
252 Ga0070674_100297573
253 Ga0070667_100132879
254 Ga0070703_10001097
255 Ga0070701_10097312
256 Ga0070705_100098874
257 Ga0070705_100101453
258 Ga0070705_100157633
259 Ga0070700_100043279
260 Ga0070700_100117460
261 Ga0070694_100029696
262 Ga0070694_100045445
263 Ga0070694_100080953
264 Ga0070694_100293484
265 Ga0070662_100059565
266 Ga0070681_10037049
267 Ga0068867_100293827
268 Ga0070707_100038528
269 Ga0070698_100114517
270 Ga0070699_100016094
271 Ga0070679_100000024
272 Ga0068853_100018612
273 Ga0068853_100213222
274 Ga0068853_100399606
275 Ga0070686_100282862
276 Ga0070695_100088015
277 Ga0070695_100195350
278 Ga0070695_100253562
279 Ga0070696_100100403
280 Ga0070696_100142158
281 Ga0070696_100587767
282 Ga0070693_100069937
283 Ga0070693_100087538
284 Ga0070693_100325700
285 Ga0070704_100134051
286 Ga0068855_100684270
287 Ga0070664_100127535
288 Ga0070664_100195342
289 Ga0068857_100008756
290 Ga0068857_100075893
291 Ga0068857_100082391
292 Ga0068857_100143464
293 Ga0068856_100069126
294 Ga0070702_100010902
295 Ga0068852_100428377
296 Ga0068859_100028044
297 Ga0068859_100035655
298 Ga0068859_100092965
299 Ga0068859_100100699
300 Ga0068859_100504584
301 Ga0068864_100020345
302 Ga0068864_100044484
303 Ga0068864_100063853
304 Ga0068864_100112095
305 Ga0068864_100116984
306 Ga0068864_100151715
307 Ga0068864_100173304
308 Ga0068861_100025052
309 Ga0068851_10009648
310 Ga0068870_10061252
311 Ga0068863_100018832
312 Ga0068863_100294250
313 Ga0068863_100421918
314 Ga0068858_100040084
315 Ga0068858_100093535
316 Ga0068858_100212774
317 Ga0068860_100007661
318 Ga0068860_100145263
319 Ga0081539_10000043
320 Ga0081539_10007178
321 Ga0070716_100086788
322 Ga0097621_100010726
323 Ga0097621_100492243
324 Ga0068871_100032295
325 Ga0068871_100102896
326 Ga0068871_100149947
327 Ga0075428_100507827
328 Ga0075431_100198229
329 Ga0075431_100327547
330 Ga0075433_10003126
331 Ga0075433_10208379
332 Ga0075434_100120912
333 Ga0075434_100162438
334 Ga0075429_100185159
335 Ga0097620_100005491
336 Ga0097620_100028044
337 Ga0097620_100035656
338 Ga0097620_100092962
339 Ga0097620_100100712
340 Ga0097620_100504501
341 Ga0075435_100550661
342 Ga0111539_10057789
343 Ga0111539_10097103
344 Ga0111539_10211483
345 Ga0105247_10017529
346 Ga0105247_10120257
347 Ga0114129_10052660
348 Ga0114129_10412809
349 Ga0105243_10014847
350 Ga0105241_10021842
351 Ga0105241_10416175
352 Ga0105241_10709387
353 Ga0105242_10029701
354 Ga0105248_10007065
355 Ga0105248_10041604
356 Ga0105248_10099082
357 Ga0105248_10177772
358 Ga0105248_10444859
359 Ga0105237_10112435
360 Ga0105249_10074532
361 Ga0105239_10172352
362 Ga0105246_10007592
363 Ga0105246_10011662
364 Ga0105246_10047384
365 Ga0105246_10120533
366 Ga0105246_10425746
367 Ga0157373_10002359
368 Ga0157373_10210600
369 Ga0157374_10183765
370 Ga0157378_10005454
371 Ga0157378_10154025
372 Ga0157378_10202466
373 Ga0163162_10005567
374 Ga0163162_10035653
375 Ga0163162_10223457
376 Ga0163162_10684422
377 Ga0157372_10152234
378 Ga0157375_10215898
379 Ga0163163_10005524
380 Ga0163163_10150118
381 Ga0163163_10202276
382 Ga0157380_10238350
383 Ga0157379_10072738
384 Ga0157376_10314641
385 Ga0207653_10002633
386 Ga0207710_10039154
387 Ga0207680_10072359
388 Ga0207647_10070648
389 Ga0207643_10001447
390 Ga0207643_10014797
391 Ga0207654_10108698
392 Ga0207707_10000188
393 Ga0207707_10432788
394 Ga0207671_10006445
395 Ga0207671_10291266
396 Ga0207660_10000403
397 Ga0207660_10099355
398 Ga0207660_10312040
399 Ga0207652_10001088
400 Ga0207687_10203362
401 Ga0207706_10020273
402 Ga0207686_10154507
403 Ga0207709_10106620
404 Ga0207670_10005206
405 Ga0207704_10523157
406 Ga0207665_10114975
407 Ga0207691_10049680
408 Ga0207711_10018204
409 Ga0207711_10029916
410 Ga0207711_10044647
411 Ga0207711_10435761
412 Ga0207689_10003167
413 Ga0207689_10022790
414 Ga0207689_10139076
415 Ga0207689_10381227
416 Ga0207651_10065899
417 Ga0207651_10110047
418 Ga0207651_10235744
419 Ga0207640_10139556
420 Ga0207640_10202883
421 Ga0207640_10447876
422 Ga0207703_10394569
423 Ga0207703_10809843
424 Ga0207639_10079352
425 Ga0207639_10100770
426 Ga0207641_10167070
427 Ga0207648_10010987
428 Ga0207648_10224828
429 Ga0207676_10002012
430 Ga0207676_10048732
431 Ga0207676_10055153
432 Ga0207676_10088848
433 Ga0207676_10158075
434 Ga0207674_10012256
435 Ga0207674_10064821
436 Ga0207674_10076163
437 Ga0207674_10111546
438 Ga0207674_10410994
439 Ga0207675_100025058
440 Ga0207675_100068758
441 Ga0207675_100084397
442 Ga0207683_10227934
443 Ga0207698_10066927
444 Ga0268264_10011513
445 Ga0268264_10130910
446 Ga0268264_10509550
447 Ga0373939_0106574
448 Ga0242420_003639
449 Ga0495658_0079183
450 Ga0496104_0077744
451 Ga0496108_0048914
452 Ga0496112_0138770
453 Ga0496112_0499654
454 nmdc:mga05p37_27645_c1
455 nmdc:mga09592_142369_c1
456 nmdc:mga0qj67_244834_c1
457 nmdc:mga06r32_80644_c1
458 nmdc:mga08y16_189272_c1
459 nmdc:mga08y16_31626_c1
460 nmdc:mga0n895_41414_c1
461 nmdc:mga0a205_10688_c1
462 nmdc:mga0a205_207589_c1

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01261

AP_endonuc_2

Xylose isomerase-like TIM barrel

54

300

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
3cqk-assembly1.cif.gz_B crystal structure of l-xylulose-5-phosphate 3-epimerase ulae (form b) complex with zn2+ and sulfate 0.8342 2 256
3cqi-assembly1.cif.gz_B crystal structure of l-xylulose-5-phosphate 3-epimerase ulae (form b) complex with sulfate 0.8268 2 256
5hmq-assembly1.cif.gz_A xylose isomerase-like tim barrel/4-hydroxyphenylpyruvate dioxygenase fusion protein 0.8197 1 229
5hmq-assembly3.cif.gz_D xylose isomerase-like tim barrel/4-hydroxyphenylpyruvate dioxygenase fusion protein 0.8182 1 229
5hmq-assembly2.cif.gz_B xylose isomerase-like tim barrel/4-hydroxyphenylpyruvate dioxygenase fusion protein 0.8152 1 229
ID Description Score Start End Superfamily
af_P45541_1_270_3.20.20.150 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.8384 2 254 3.20.20.150
3cqiB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.8268 2 256 3.20.20.150
5h1wA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.8144 2 256 3.20.20.150
af_Q8IE02_304_597_3.20.20.150 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.8048 2 255 3.20.20.150
af_P32134_16_258_3.20.20.150 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.8033 2 228 3.20.20.150
ID Description Score Start End GO Terms
AF-A0A7V9TZC1-F1-model_v4 Sugar phosphate isomerase/epimerase 0.986 1 255 GO:0016853
AF-A0A2V2RXH6-F1-model_v4 Xylose isomerase-like TIM barrel domain-containing protein 0.9705 1 114
AF-A0A4Q6A6G3-F1-model_v4 Twin-arginine translocation signal domain-containing protein 0.968 3 120
AF-A0A2V9PBA7-F1-model_v4 Xylose isomerase-like TIM barrel domain-containing protein 0.9638 2 134
AF-A0A2V9MLJ1-F1-model_v4 Xylose isomerase 0.9629 4 130 GO:0016853

Map