F344265

General Info

Members Datasets Scaffolds Average Seq Length
231 170 462 195

Family's Representative Sequence

Representative Sequence 3300039438|Ga0436360_0811297|Ga0436360_0811297_195_860
Length 221
Sequence MKNTKVTSELGRRLGYPHFYWRDGLIVPLIGLVLLFYPLTAFAHKRGGEAIGFVSGFEHPISGLDHILAMVAVGLWGAQLGAPAIWVLPVVFPMIMALGGMMGLMGIPLPGIELCIALSAVALGFAVFREARPKLWIAAMIVGFFAIAHGHAHGTELPAGASGILYSIGFVIATGLLHATGIGIGLVHRWPAGRVALRLSGAAVAIGGMFFLWKALSGEPV

Samples

Sample ID Description Type Environment
1 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
2 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
3 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
4 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
13 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
14 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
15 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
19 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
25 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
26 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
29 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
30 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
31 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
32 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
33 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
34 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
35 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
36 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
37 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
38 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
39 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
40 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300009765 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico pink nodule Metagenome Nodule
43 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
44 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
45 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
46 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
47 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
48 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
49 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
50 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
51 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
52 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
53 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
54 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
55 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
56 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
57 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
79 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
80 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
81 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
82 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
83 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
84 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
85 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
86 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
87 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
88 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
89 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
90 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
91 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
92 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
93 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
94 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
95 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
96 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
97 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
98 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
99 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
100 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
101 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
102 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
103 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
104 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
105 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
106 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
107 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
108 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
109 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
110 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
111 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
112 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
113 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
114 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
115 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
116 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
117 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
118 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
119 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
120 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
121 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
122 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
123 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
130 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
131 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
132 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
133 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
134 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
135 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
136 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
137 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
138 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
139 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
140 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
141 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
142 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
143 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
144 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
145 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
146 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
147 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
148 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
149 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
150 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
151 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
152 2513237084 Rhizobium leguminosarum bv. viciae UPM1131 Isolate Nodule
153 2515075009 Rhizobium leguminosarum bv. viciae 248 Isolate Nodule
154 2529292951 Rhizobium sp. CCGE 510 Isolate Nodule
155 2582581294 Rhizobium sp. CF394 Isolate Rhizosphere
156 2582581299 Rhizobium leguminosarum OV483 Isolate Rhizosphere
157 2615840624 Rhizobium aethiopicum HBR26 Isolate Nodule
158 2643221599 Rhizobium sp. Root708 Isolate Unclassified
159 2643221634 Rhizobium sp. Root1203 Isolate Unclassified
160 2718217927 Rhizobium sp. N324 Isolate Nodule
161 2718218423 Rhizobium sp. N941 Isolate Nodule
162 2721755809 Rhizobium sp. N541 Isolate Nodule
163 2767802442 Phyllobacterium brassicacearum 29-15 Isolate Rhizoplane
164 2842395702 Rhizobium ecuadorense SEMIA 4029 Isolate Nodule
165 8005258706 Rhizobium sp. R693 Isolate Nodule
166 8005275841 Rhizobium sp. N4311 Isolate Nodule
167 8005460587 Rhizobium leguminosarum bv. viciae 248 Isolate Nodule
168 8005695170 Rhizobium sp. RMa-01 Isolate Unclassified
169 8018127388 Rhizobium aegyptiacum 950 Isolate Nodule
170 8018176218 Rhizobium sp. N122 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 90.04
Metatranscriptomes 1.73
Isolates 8.23

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.66
Nodule 6.06
Rhizoplane 0.43
Rhizosphere 81.39
Stem 0
Stem Tuber 0
Unclassified 9.52

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436360_0811297 3300039438 Unclassified 1840
2 JGI25152J39213_1002244 3300002773 Bacteria 7478
3 JGI25151J46595_10002302 3300003187 Bacteria 11668
4 Ga0055524_1060344 3300003775 Unclassified 790
5 Ga0070670_100058547 3300005331 Bacteria 3307
6 Ga0070677_10036635 3300005333 Bacteria 1910
7 Ga0070668_100024577 3300005347 Bacteria 4565
8 Ga0070669_100012879 3300005353 Bacteria 5941
9 Ga0070669_100468845 3300005353 Bacteria 1040
10 Ga0070675_100000733 3300005354 Bacteria 22863
11 Ga0070673_100715317 3300005364 Bacteria 920
12 Ga0070659_100211947 3300005366 Bacteria 1597
13 Ga0070659_100305457 3300005366 Bacteria 1328
14 Ga0070700_100164889 3300005441 Bacteria 1529
15 Ga0070694_100124187 3300005444 Bacteria 1856
16 Ga0070663_100594742 3300005455 Bacteria 930
17 Ga0068867_100015048 3300005459 Bacteria 5485
18 Ga0070698_100042300 3300005471 Unclassified 4672
19 Ga0070698_100081476 3300005471 Bacteria 3230
20 Ga0070698_100110689 3300005471 Bacteria 2711
21 Ga0070699_100049715 3300005518 Bacteria 3629
22 Ga0070699_100070314 3300005518 Bacteria 3042
23 Ga0070672_100114931 3300005543 Bacteria 2197
24 Ga0070672_100435050 3300005543 Unclassified 1128
25 Ga0070695_100460560 3300005545 Bacteria 976
26 Ga0070665_100025162 3300005548 Bacteria 5998
27 Ga0070665_100656119 3300005548 Unclassified 1062
28 Ga0070704_100090351 3300005549 Bacteria 2281
29 Ga0070704_100140334 3300005549 Bacteria 1886
30 Ga0070704_100385306 3300005549 Bacteria 1192
31 Ga0068857_100648601 3300005577 Bacteria 1000
32 Ga0068856_100670209 3300005614 Unclassified 1058
33 Ga0068864_100103677 3300005618 Bacteria 2526
34 Ga0068861_100371462 3300005719 Bacteria 1261
35 Ga0068870_10018261 3300005840 Bacteria 3383
36 Ga0068860_100128802 3300005843 Bacteria 2427
37 Ga0068860_100586625 3300005843 Bacteria 1119
38 Ga0068862_100571543 3300005844 Bacteria 1082
39 Ga0081455_10027688 3300005937 Bacteria 5190
40 Ga0081455_10151868 3300005937 Unclassified 1784
41 Ga0075364_10210474 3300006051 Bacteria 1319
42 Ga0075362_10001049 3300006177 Bacteria 8531
43 Ga0075367_10004346 3300006178 Bacteria 6903
44 Ga0075366_10127946 3300006195 Bacteria 1532
45 Ga0075428_100773227 3300006844 Bacteria 1021
46 Ga0075430_100000281 3300006846 Bacteria 35697
47 Ga0075431_100093184 3300006847 Bacteria 3109
48 Ga0075431_100896058 3300006847 Bacteria 857
49 Ga0075433_10384883 3300006852 Bacteria 1238
50 Ga0075429_100237323 3300006880 Bacteria 1597
51 Ga0068865_100028359 3300006881 Bacteria 3706
52 Ga0111539_10015955 3300009094 Bacteria 9332
53 Ga0105248_10729428 3300009177 Bacteria 1118
54 Ga0123341_1080090 3300009765 Bacteria 1291
55 Ga0163162_10673374 3300013306 Bacteria 1157
56 Ga0163162_10774545 3300013306 Unclassified 1078
57 Ga0157375_10018616 3300013308 Bacteria 6301
58 Ga0163163_10378781 3300014325 Bacteria 1472
59 Ga0157380_10031683 3300014326 Bacteria 4060
60 Ga0157380_11506535 3300014326 Bacteria 726
61 Ga0157377_10141651 3300014745 Bacteria 1478
62 Ga0157376_10999758 3300014969 Bacteria 859
63 Ga0163161_10149158 3300017792 Bacteria 1776
64 Ga0213872_10113239 3300021361 Bacteria 1203
65 Ga0213871_10011001 3300021441 Bacteria 2067
66 Ga0209129_1000209 3300025258 Bacteria 68109
67 Ga0209129_1000832 3300025258 Bacteria 19452
68 Ga0209025_1001222 3300025294 Bacteria 35884
69 Ga0209758_1007161 3300025297 Bacteria 7695
70 Ga0209758_1027631 3300025297 Bacteria 2419
71 Ga0209256_1019003 3300025299 Bacteria 2205
72 Ga0207426_1001135 3300025302 Bacteria 24064
73 Ga0207697_10079732 3300025315 Bacteria 1379
74 Ga0207682_10007711 3300025893 Bacteria 4279
75 Ga0207645_10039904 3300025907 Bacteria 3007
76 Ga0207643_10009454 3300025908 Bacteria 5237
77 Ga0207684_10281027 3300025910 Bacteria 1435
78 Ga0207684_10361249 3300025910 Bacteria 1250
79 Ga0207663_10215469 3300025916 Unclassified 1394
80 Ga0207646_10051311 3300025922 Bacteria 3691
81 Ga0207646_10178556 3300025922 Bacteria 1917
82 Ga0207681_10021796 3300025923 Bacteria 4078
83 Ga0207659_10030692 3300025926 Bacteria 3674
84 Ga0207690_10263833 3300025932 Bacteria 1335
85 Ga0207706_10003577 3300025933 Bacteria 14836
86 Ga0207691_10003098 3300025940 Bacteria 16231
87 Ga0207691_10325229 3300025940 Bacteria 1318
88 Ga0207712_10059218 3300025961 Bacteria 2710
89 Ga0207668_10021371 3300025972 Bacteria 4127
90 Ga0207678_10551490 3300026067 Bacteria 1008
91 Ga0207708_10025269 3300026075 Bacteria 4493
92 Ga0207708_10520389 3300026075 Bacteria 999
93 Ga0207641_10022901 3300026088 Bacteria 5145
94 Ga0207641_10085545 3300026088 Bacteria 2748
95 Ga0207648_10018328 3300026089 Bacteria 6341
96 Ga0207675_100095010 3300026118 Bacteria 2804
97 Ga0207675_100193152 3300026118 Bacteria 1953
98 Ga0268266_10595281 3300028379 Unclassified 1062
99 Ga0268265_10759572 3300028380 Bacteria 942
100 Ga0265328_10034024 3300031239 Bacteria 1887
101 Ga0265339_10024184 3300031249 Bacteria 3504
102 Ga0265331_10061194 3300031250 Bacteria 1778
103 Ga0265316_10151861 3300031344 Bacteria 1734
104 Ga0316575_10019819 3300031665 Bacteria 2575
105 Ga0316575_10052596 3300031665 Unclassified 1622
106 Ga0265314_10381352 3300031711 Bacteria 767
107 Ga0316576_10003434 3300031727 Bacteria 9275
108 Ga0316576_10016692 3300031727 Bacteria 4968
109 Ga0316576_10019857 3300031727 Bacteria 4610
110 Ga0316576_10082757 3300031727 Bacteria 2383
111 Ga0316576_10106040 3300031727 Bacteria 2104
112 Ga0316578_10007428 3300031728 Bacteria 5498
113 Ga0316578_10051646 3300031728 Bacteria 2408
114 Ga0316578_10133868 3300031728 Bacteria 1492
115 Ga0316577_10225349 3300031733 Bacteria 1060
116 Ga0316583_10010344 3300032133 Bacteria 3363
117 Ga0316585_10016108 3300032137 Bacteria 2248
118 Ga0316580_10068451 3300032139 Bacteria 1088
119 Ga0316592_1001932 3300033524 Unclassified 3491
120 Ga0316592_1039580 3300033524 Bacteria 1042
121 Ga0316588_1003192 3300033528 Bacteria 2957
122 Ga0316588_1023237 3300033528 Unclassified 1421
123 Ga0373943_0229612 3300035170 Bacteria 1036
124 Ga0373955_0024422 3300035172 Unclassified 3092
125 Ga0316574_0011790 3300035398 Bacteria 4978
126 Ga0316574_0012493 3300035398 Bacteria 4858
127 Ga0316574_0036282 3300035398 Bacteria 3017
128 Ga0316574_0060747 3300035398 Bacteria 2373
129 Ga0316574_0068116 3300035398 Bacteria 2244
130 Ga0316574_0343231 3300035398 Bacteria 945
131 Ga0373935_0756752 3300035692 Bacteria 716
132 Ga0373933_0005654 3300035724 Bacteria 6807
133 Ga0316582_0069428 3300036647 Bacteria 2277
134 Ga0316582_0076195 3300036647 Bacteria 2181
135 Ga0316582_0245320 3300036647 Bacteria 1227
136 Ga0316582_0268510 3300036647 Bacteria 1170
137 Ga0316582_0373004 3300036647 Bacteria 982
138 Ga0316584_0032629 3300036712 Bacteria 3855
139 Ga0316584_0088387 3300036712 Bacteria 2320
140 Ga0316584_0109243 3300036712 Unclassified 2069
141 Ga0316584_0215775 3300036712 Bacteria 1411
142 Ga0316584_0380236 3300036712 Bacteria 1009
143 Ga0316584_0460434 3300036712 Bacteria 898
144 Ga0316584_0534169 3300036712 Bacteria 820
145 Ga0373925_0521622 3300037068 Bacteria 976
146 Ga0400489_71775 3300039093 Bacteria 26196
147 Ga0436360_0068686 3300039438 Unclassified 1446
148 Ga0436360_0919877 3300039438 Bacteria 6220
149 Ga0436361_0384224 3300039447 Bacteria 2625
150 Ga0436361_0514206 3300039447 Unclassified 1354
151 Ga0436361_0673078 3300039447 Bacteria 7636
152 Ga0436361_0906678 3300039447 Bacteria 5886
153 Ga0436362_0545331 3300039453 Bacteria 1889
154 Ga0451576_0164703 3300045051 Bacteria 2314
155 Ga0495603_0442808 3300046455 Bacteria 744
156 Ga0495629_0122459 3300046459 Bacteria 1812
157 Ga0495629_0445375 3300046459 Bacteria 877
158 Ga0495638_0000035 3300046460 Bacteria 276385
159 Ga0495639_0113186 3300046475 Bacteria 1289
160 Ga0495628_0532697 3300046516 Bacteria 845
161 Ga0495630_0475640 3300046517 Bacteria 958
162 Ga0495622_0142870 3300046557 Bacteria 1086
163 Ga0495633_0128464 3300046558 Bacteria 1173
164 Ga0495633_0309849 3300046558 Bacteria 717
165 Ga0495668_0121384 3300046616 Bacteria 1429
166 Ga0495581_0042995 3300047315 Bacteria 2614
167 Ga0495604_0009029 3300047317 Bacteria 7887
168 Ga0495672_0249730 3300047320 Bacteria 862
169 Ga0495680_0092193 3300047322 Bacteria 2270
170 Ga0495680_0099356 3300047322 Bacteria 2170
171 Ga0495675_0221222 3300047444 Bacteria 1146
172 Ga0495684_0116432 3300047471 Bacteria 2015
173 Ga0495602_0004283 3300048088 Bacteria 14859
174 Ga0496121_0091791 3300048924 Bacteria 2369
175 Ga0496122_0000853 3300048925 Bacteria 57365
176 Ga0496123_0000748 3300048926 Bacteria 52564
177 Ga0496123_0091855 3300048926 Bacteria 1799
178 Ga0501031_0522460 3300049568 Bacteria 765
179 Ga0501036_0168115 3300049572 Bacteria 1848
180 Ga0501040_0059593 3300049576 Bacteria 2623
181 Ga0501041_0155893 3300049577 Bacteria 1427
182 Ga0501042_0435771 3300049578 Bacteria 950
183 Ga0501043_0189932 3300049579 Bacteria 1598
184 Ga0501068_0324969 3300049584 Bacteria 986
185 Ga0501072_0846142 3300049588 Bacteria 715
186 Ga0501073_0245832 3300049589 Bacteria 1235
187 Ga0501075_0002349 3300049591 Bacteria 12565
188 Ga0501075_0179325 3300049591 Bacteria 1616
189 Ga0501076_0000887 3300049592 Bacteria 19465
190 Ga0501079_0144163 3300049741 Bacteria 1856
191 Ga0501080_0284934 3300049742 Unclassified 1501
192 Ga0501081_0275402 3300049743 Unclassified 1231
193 Ga0501081_0314891 3300049743 Bacteria 1149
194 Ga0501083_0059071 3300049744 Bacteria 2565
195 nmdc:mga03683_4131_c1 3300050489 Bacteria 4775
196 nmdc:mga00v17_13876_c1 3300050491 Bacteria 4483
197 nmdc:mga0yw44_371949_c1 3300050492 Unclassified 964
198 nmdc:mga0k408_123006_c1 3300050493 Bacteria 1538
199 nmdc:mga06z11_9933_c1 3300050494 Bacteria 4032
200 nmdc:mga09592_273108_c1 3300050508 Bacteria 1466
201 nmdc:mga0qj67_52_c1 3300050509 Bacteria 84067
202 nmdc:mga06r32_56527_c1 3300050510 Bacteria 3767
203 nmdc:mga08y16_618239_c1 3300050511 Unclassified 1090
204 Ga0495619_0021118 3300053085 Bacteria 4155
205 Ga0500595_144980 3300053119 Unclassified 665
206 Ga0501084_0070791 3300054114 Bacteria 2920
207 Ga0501084_0145653 3300054114 Bacteria 1995
208 Ga0501082_0036284 3300060353 Bacteria 4247
209 Ga0501082_0043921 3300060353 Bacteria 3855
210 Ga0501082_0222478 3300060353 Bacteria 1642
211 Ga0530510_0002105 3300061734 Bacteria 13667
212 Ga0530510_0120698 3300061734 Bacteria 1924
213 2513571813 2513237084 Bacteria 7231967
214 2515109337 2515075009 Bacteria 7288508
215 2530650017 2529292951 Bacteria 6916614
216 2585204787 2582581294 Bacteria 6626667
217 2585231130 2582581299 Bacteria 6518058
218 2616294413 2615840624 Bacteria 6557588
219 2644003435 2643221599 Bacteria 6292121
220 2644195510 2643221634 Bacteria 6705461
221 2719389078 2718217927 Bacteria 6972593
222 2721402607 2718218423 Bacteria 6438183
223 2724034673 2721755809 Bacteria 6438790
224 2770197729 2767802442 Bacteria 5747986
225 2842399465 2842395702 Bacteria 6780583
226 8005263843 8005258706 Bacteria 6184835
227 8005276497 8005275841 Bacteria 6929066
228 8005466517 8005460587 Bacteria 7157962
229 8005700547 8005695170 Bacteria 6912330
230 8018129001 8018127388 Bacteria 7351159
231 8018177514 8018176218 Bacteria 6896178
232 Ga0436360_0811297
233 JGI25152J39213_1002244
234 JGI25151J46595_10002302
235 Ga0055524_1060344
236 Ga0070670_100058547
237 Ga0070677_10036635
238 Ga0070668_100024577
239 Ga0070669_100012879
240 Ga0070669_100468845
241 Ga0070675_100000733
242 Ga0070673_100715317
243 Ga0070659_100211947
244 Ga0070659_100305457
245 Ga0070700_100164889
246 Ga0070694_100124187
247 Ga0070663_100594742
248 Ga0068867_100015048
249 Ga0070698_100042300
250 Ga0070698_100081476
251 Ga0070698_100110689
252 Ga0070699_100049715
253 Ga0070699_100070314
254 Ga0070672_100114931
255 Ga0070672_100435050
256 Ga0070695_100460560
257 Ga0070665_100025162
258 Ga0070665_100656119
259 Ga0070704_100090351
260 Ga0070704_100140334
261 Ga0070704_100385306
262 Ga0068857_100648601
263 Ga0068856_100670209
264 Ga0068864_100103677
265 Ga0068861_100371462
266 Ga0068870_10018261
267 Ga0068860_100128802
268 Ga0068860_100586625
269 Ga0068862_100571543
270 Ga0081455_10027688
271 Ga0081455_10151868
272 Ga0075364_10210474
273 Ga0075362_10001049
274 Ga0075367_10004346
275 Ga0075366_10127946
276 Ga0075428_100773227
277 Ga0075430_100000281
278 Ga0075431_100093184
279 Ga0075431_100896058
280 Ga0075433_10384883
281 Ga0075429_100237323
282 Ga0068865_100028359
283 Ga0111539_10015955
284 Ga0105248_10729428
285 Ga0123341_1080090
286 Ga0163162_10673374
287 Ga0163162_10774545
288 Ga0157375_10018616
289 Ga0163163_10378781
290 Ga0157380_10031683
291 Ga0157380_11506535
292 Ga0157377_10141651
293 Ga0157376_10999758
294 Ga0163161_10149158
295 Ga0213872_10113239
296 Ga0213871_10011001
297 Ga0209129_1000209
298 Ga0209129_1000832
299 Ga0209025_1001222
300 Ga0209758_1007161
301 Ga0209758_1027631
302 Ga0209256_1019003
303 Ga0207426_1001135
304 Ga0207697_10079732
305 Ga0207682_10007711
306 Ga0207645_10039904
307 Ga0207643_10009454
308 Ga0207684_10281027
309 Ga0207684_10361249
310 Ga0207663_10215469
311 Ga0207646_10051311
312 Ga0207646_10178556
313 Ga0207681_10021796
314 Ga0207659_10030692
315 Ga0207690_10263833
316 Ga0207706_10003577
317 Ga0207691_10003098
318 Ga0207691_10325229
319 Ga0207712_10059218
320 Ga0207668_10021371
321 Ga0207678_10551490
322 Ga0207708_10025269
323 Ga0207708_10520389
324 Ga0207641_10022901
325 Ga0207641_10085545
326 Ga0207648_10018328
327 Ga0207675_100095010
328 Ga0207675_100193152
329 Ga0268266_10595281
330 Ga0268265_10759572
331 Ga0265328_10034024
332 Ga0265339_10024184
333 Ga0265331_10061194
334 Ga0265316_10151861
335 Ga0316575_10019819
336 Ga0316575_10052596
337 Ga0265314_10381352
338 Ga0316576_10003434
339 Ga0316576_10016692
340 Ga0316576_10019857
341 Ga0316576_10082757
342 Ga0316576_10106040
343 Ga0316578_10007428
344 Ga0316578_10051646
345 Ga0316578_10133868
346 Ga0316577_10225349
347 Ga0316583_10010344
348 Ga0316585_10016108
349 Ga0316580_10068451
350 Ga0316592_1001932
351 Ga0316592_1039580
352 Ga0316588_1003192
353 Ga0316588_1023237
354 Ga0373943_0229612
355 Ga0373955_0024422
356 Ga0316574_0011790
357 Ga0316574_0012493
358 Ga0316574_0036282
359 Ga0316574_0060747
360 Ga0316574_0068116
361 Ga0316574_0343231
362 Ga0373935_0756752
363 Ga0373933_0005654
364 Ga0316582_0069428
365 Ga0316582_0076195
366 Ga0316582_0245320
367 Ga0316582_0268510
368 Ga0316582_0373004
369 Ga0316584_0032629
370 Ga0316584_0088387
371 Ga0316584_0109243
372 Ga0316584_0215775
373 Ga0316584_0380236
374 Ga0316584_0460434
375 Ga0316584_0534169
376 Ga0373925_0521622
377 Ga0400489_71775
378 Ga0436360_0068686
379 Ga0436360_0919877
380 Ga0436361_0384224
381 Ga0436361_0514206
382 Ga0436361_0673078
383 Ga0436361_0906678
384 Ga0436362_0545331
385 Ga0451576_0164703
386 Ga0495603_0442808
387 Ga0495629_0122459
388 Ga0495629_0445375
389 Ga0495638_0000035
390 Ga0495639_0113186
391 Ga0495628_0532697
392 Ga0495630_0475640
393 Ga0495622_0142870
394 Ga0495633_0128464
395 Ga0495633_0309849
396 Ga0495668_0121384
397 Ga0495581_0042995
398 Ga0495604_0009029
399 Ga0495672_0249730
400 Ga0495680_0092193
401 Ga0495680_0099356
402 Ga0495675_0221222
403 Ga0495684_0116432
404 Ga0495602_0004283
405 Ga0496121_0091791
406 Ga0496122_0000853
407 Ga0496123_0000748
408 Ga0496123_0091855
409 Ga0501031_0522460
410 Ga0501036_0168115
411 Ga0501040_0059593
412 Ga0501041_0155893
413 Ga0501042_0435771
414 Ga0501043_0189932
415 Ga0501068_0324969
416 Ga0501072_0846142
417 Ga0501073_0245832
418 Ga0501075_0002349
419 Ga0501075_0179325
420 Ga0501076_0000887
421 Ga0501079_0144163
422 Ga0501080_0284934
423 Ga0501081_0275402
424 Ga0501081_0314891
425 Ga0501083_0059071
426 nmdc:mga03683_4131_c1
427 nmdc:mga00v17_13876_c1
428 nmdc:mga0yw44_371949_c1
429 nmdc:mga0k408_123006_c1
430 nmdc:mga06z11_9933_c1
431 nmdc:mga09592_273108_c1
432 nmdc:mga0qj67_52_c1
433 nmdc:mga06r32_56527_c1
434 nmdc:mga08y16_618239_c1
435 Ga0495619_0021118
436 Ga0500595_144980
437 Ga0501084_0070791
438 Ga0501084_0145653
439 Ga0501082_0036284
440 Ga0501082_0043921
441 Ga0501082_0222478
442 Ga0530510_0002105
443 Ga0530510_0120698
444 2513571813
445 2515109337
446 2530650017
447 2585204787
448 2585231130
449 2616294413
450 2644003435
451 2644195510
452 2719389078
453 2721402607
454 2724034673
455 2770197729
456 2842399465
457 8005263843
458 8005276497
459 8005466517
460 8005700547
461 8018129001
462 8018177514

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04955

HupE_UreJ

HupE / UreJ protein

32

211

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
7yub-assembly1.cif.gz_R s1p-bound human spns2 0.5408 17 169
5oxl-assembly1.cif.gz_A peptst in complex with dipeptide ala-leu 0.5327 19 170
8thr-assembly1.cif.gz_A structure of the human vesicular monoamine transporter 2 (vmat2) bound to tetrabenazine in an occluded conformation 0.5292 19 168
7yub-assembly1.cif.gz_R s1p-bound human spns2 0.4915 17 169
5oxl-assembly1.cif.gz_A peptst in complex with dipeptide ala-leu 0.4847 19 170
ID Description Score Start End Superfamily
af_Q8I2A8_11_433_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.6012 18 170 1.20.1250.20
af_A0A1D6L8U4_23_213_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5581 18 169 1.20.1250.20
af_A0A1L1SUI3_3_201_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5426 14 170 1.20.1250.20
af_Q8I2A8_11_433_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5402 18 170 1.20.1250.20
af_Q4D047_16_187_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5388 19 170 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A2P5MFW1-F1-model_v4 TonB-dependent receptor 0.9913 19 137 GO:0009279
AF-X5PJ58-F1-model_v4 Protein hupE 0.9891 15 141 GO:0016020
AF-A0A257NHL6-F1-model_v4 Bipartite protein 0.9886 19 137 GO:0009279
GO:0015344
AF-A0A257N7I1-F1-model_v4 Bipartite protein 0.988 19 137 GO:0009279
GO:0015344
AF-A0A369TCE0-F1-model_v4 Urease accessory protein 0.9859 15 170 GO:0016020

Map