F344248

General Info

Members Datasets Scaffolds Average Seq Length
231 127 462 97

Family's Representative Sequence

Representative Sequence 3300037418|Ga0395900_1644683|Ga0395900_1644683_176_514
Length 112
Sequence LAGAGVEPGQAAAEGMREAGMRGYTESKDQLLSRLRRVEGQVRGLQRMVDEDAYCIDVLTQISAANAALRSVAVALLDGHLRHCVRDAAGDDARSDAIVTEATDAINRLLKA

Samples

Sample ID Description Type Environment
1 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
2 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
3 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
4 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
5 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
6 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
7 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
8 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
9 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
10 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
11 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
12 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
13 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
14 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
15 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
16 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
17 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
18 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
19 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
20 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
21 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
22 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
23 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
24 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
25 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
26 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
27 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
29 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
32 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
33 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
34 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
47 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
48 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
49 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
50 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
51 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
52 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
53 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
54 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
55 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
56 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
57 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
58 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
59 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
60 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
61 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
62 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
63 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
64 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
65 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
66 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
67 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
68 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
69 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
70 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
71 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
72 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
73 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
74 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
75 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
76 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
77 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
78 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
79 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
80 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
81 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
82 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
83 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
84 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
85 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
86 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
87 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
88 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
89 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
90 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
91 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
92 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
93 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
94 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
95 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
96 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
97 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
98 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
99 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
100 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
101 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
102 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
103 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
104 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
105 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
106 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
107 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
109 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
110 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
111 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
112 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
113 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
114 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
115 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
116 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
117 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
118 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
119 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
120 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
121 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
122 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
123 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
124 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
125 2858868258 Micromonospora sp. MH33 Isolate Unclassified
126 649633069 Micromonospora sp. L5 Isolate Unclassified
127 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.84
Metatranscriptomes 0
Isolates 2.16

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.3
Nodule 0
Rhizoplane 4.76
Rhizosphere 75.76
Stem 0
Stem Tuber 0
Unclassified 1.3

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395900_1644683 3300037418 Bacteria 553
2 Ga0070714_100894411 3300005435 Bacteria 862
3 Ga0070714_101432230 3300005435 Bacteria 675
4 Ga0070714_101508073 3300005435 Bacteria 657
5 Ga0070707_100103010 3300005468 Bacteria 2766
6 Ga0070707_100886328 3300005468 Bacteria 857
7 Ga0070684_100074115 3300005535 Bacteria 3000
8 Ga0070684_101055823 3300005535 Bacteria 763
9 Ga0070697_101536243 3300005536 Bacteria 595
10 Ga0068853_100421253 3300005539 Bacteria 1252
11 Ga0070696_100772475 3300005546 Bacteria 789
12 Ga0068854_101586188 3300005578 Bacteria 596
13 Ga0068856_100259872 3300005614 Bacteria 1752
14 Ga0068859_102047186 3300005617 Bacteria 632
15 Ga0068851_10064963 3300005834 Bacteria 1877
16 Ga0068863_100926951 3300005841 Bacteria 872
17 Ga0070717_10007823 3300006028 Bacteria 7953
18 Ga0070717_10281552 3300006028 Bacteria 1475
19 Ga0070717_12097839 3300006028 Bacteria 509
20 Ga0075365_10706523 3300006038 Bacteria 712
21 Ga0075364_10254636 3300006051 Bacteria 1193
22 Ga0070716_100809274 3300006173 Bacteria 726
23 Ga0070712_101193160 3300006175 Bacteria 662
24 Ga0075428_100461007 3300006844 Bacteria 1361
25 Ga0075430_100041196 3300006846 Bacteria 3907
26 Ga0075431_100022214 3300006847 Bacteria 6488
27 Ga0075433_10590750 3300006852 Bacteria 975
28 Ga0075434_100038651 3300006871 Bacteria 4727
29 Ga0075434_100746300 3300006871 Bacteria 996
30 Ga0075429_101253567 3300006880 Bacteria 647
31 Ga0075436_100307169 3300006914 Bacteria 1138
32 Ga0075436_100525660 3300006914 Bacteria 867
33 Ga0097620_102047002 3300006931 Bacteria 632
34 Ga0075435_100020968 3300007076 Bacteria 5019
35 Ga0111539_10011829 3300009094 Bacteria 10938
36 Ga0111539_10015829 3300009094 Bacteria 9368
37 Ga0111539_10335716 3300009094 Bacteria 1759
38 Ga0105245_11294869 3300009098 Bacteria 778
39 Ga0105247_10210985 3300009101 Bacteria 1310
40 Ga0114129_10179674 3300009147 Bacteria 2880
41 Ga0114129_10407644 3300009147 Bacteria 1791
42 Ga0114129_10929410 3300009147 Bacteria 1100
43 Ga0114129_11126314 3300009147 Bacteria 981
44 Ga0114129_11972488 3300009147 Bacteria 706
45 Ga0114129_12075238 3300009147 Bacteria 686
46 Ga0213874_10029235 3300021377 Bacteria 1580
47 Ga0213874_10074566 3300021377 Bacteria 1088
48 Ga0213874_10078811 3300021377 Bacteria 1064
49 Ga0213874_10214655 3300021377 Bacteria 697
50 Ga0213876_10018275 3300021384 Bacteria 3701
51 Ga0213876_10058444 3300021384 Bacteria 2036
52 Ga0213876_10115638 3300021384 Bacteria 1423
53 Ga0213876_10273564 3300021384 Bacteria 898
54 Ga0213875_10054950 3300021388 Bacteria 1864
55 Ga0213875_10060594 3300021388 Unclassified 1770
56 Ga0213875_10109525 3300021388 Bacteria 1289
57 Ga0213875_10305674 3300021388 Bacteria 753
58 Ga0207692_10127178 3300025898 Bacteria 1435
59 Ga0207710_10216149 3300025900 Bacteria 950
60 Ga0207693_11049475 3300025915 Bacteria 621
61 Ga0207649_10961944 3300025920 Bacteria 671
62 Ga0207646_10106275 3300025922 Bacteria 2518
63 Ga0207646_10678978 3300025922 Bacteria 922
64 Ga0207646_11185426 3300025922 Unclassified 670
65 Ga0207664_10315231 3300025929 Bacteria 1379
66 Ga0207664_10426369 3300025929 Bacteria 1182
67 Ga0207664_11458507 3300025929 Bacteria 605
68 Ga0207689_10810646 3300025942 Bacteria 790
69 Ga0207661_10010870 3300025944 Bacteria 6569
70 Ga0207679_10280077 3300025945 Bacteria 1430
71 Ga0207639_10390370 3300026041 Bacteria 1252
72 Ga0207702_10302737 3300026078 Bacteria 1517
73 Ga0207641_10986297 3300026088 Bacteria 839
74 Ga0207428_10029865 3300027907 Bacteria 4510
75 Ga0207428_10224696 3300027907 Bacteria 1406
76 Ga0307409_100109971 3300031995 Bacteria 2309
77 Ga0307416_100791838 3300032002 Bacteria 1043
78 Ga0373951_0169726 3300035091 Bacteria 621
79 Ga0373939_0021953 3300035114 Bacteria 1754
80 Ga0373955_0082767 3300035172 Bacteria 1817
81 Ga0373942_0074476 3300035207 Bacteria 997
82 Ga0373961_0449008 3300035241 Bacteria 502
83 Ga0373931_0825196 3300035691 Bacteria 619
84 Ga0395898_0171687 3300037466 Bacteria 2073
85 Ga0395898_0612380 3300037466 Bacteria 1032
86 Ga0395898_0640563 3300037466 Bacteria 1005
87 Ga0395905_0380002 3300037471 Bacteria 1306
88 Ga0436364_0040297 3300037853 Bacteria 15133
89 Ga0436364_0609927 3300037853 Bacteria 737
90 Ga0436364_0905627 3300037853 Bacteria 2838
91 Ga0436364_1295205 3300037853 Bacteria 6475
92 Ga0436364_1342407 3300037853 Bacteria 4783
93 Ga0395901_2148911 3300038443 Bacteria 503
94 Ga0436365_0009199 3300039437 Bacteria 3598
95 Ga0436365_0212021 3300039437 Bacteria 9772
96 Ga0436365_0281194 3300039437 Bacteria 2155
97 Ga0436365_0298034 3300039437 Bacteria 2281
98 Ga0436365_0729386 3300039437 Bacteria 6979
99 Ga0436365_1612362 3300039437 Bacteria 3356
100 Ga0436365_1732443 3300039437 Bacteria 1604
101 Ga0436360_0638340 3300039438 Bacteria 1287
102 Ga0436361_0250573 3300039447 Bacteria 1410
103 Ga0436363_0106238 3300039450 Bacteria 643
104 Ga0436363_0157123 3300039450 Bacteria 1654
105 Ga0436363_0359231 3300039450 Bacteria 11386
106 Ga0436363_0399909 3300039450 Bacteria 584
107 Ga0436363_0449031 3300039450 Bacteria 10298
108 Ga0436363_0460159 3300039450 Bacteria 1690
109 Ga0436363_0910664 3300039450 Bacteria 1774
110 Ga0436363_1040769 3300039450 Bacteria 500
111 Ga0436363_1361509 3300039450 Bacteria 973
112 Ga0436363_1377217 3300039450 Bacteria 23253
113 Ga0436363_1419250 3300039450 Bacteria 4280
114 Ga0436363_1495424 3300039450 Bacteria 3051
115 Ga0436363_1659321 3300039450 Bacteria 1450
116 Ga0436362_0062445 3300039453 Bacteria 627
117 Ga0436362_0467477 3300039453 Bacteria 583
118 Ga0436362_0704426 3300039453 Bacteria 578
119 Ga0436362_0716136 3300039453 Bacteria 2095
120 Ga0436362_0763522 3300039453 Bacteria 607
121 Ga0436362_0901821 3300039453 Bacteria 860
122 Ga0436362_1278535 3300039453 Bacteria 5347
123 Ga0439461_0226174 3300041410 Bacteria 512
124 Ga0439432_195076 3300042006 Bacteria 588
125 Ga0439434_0129429 3300042435 Bacteria 827
126 Ga0466969_0269077 3300044656 Bacteria 772
127 Ga0466965_0046529 3300044683 Bacteria 2148
128 Ga0466965_0156237 3300044683 Bacteria 1194
129 Ga0466965_0405067 3300044683 Bacteria 754
130 Ga0466965_0571726 3300044683 Bacteria 640
131 Ga0466966_0027404 3300044684 Bacteria 3716
132 Ga0466966_0258246 3300044684 Bacteria 1049
133 Ga0466961_0069337 3300044693 Bacteria 2239
134 Ga0466961_0581912 3300044693 Bacteria 674
135 Ga0466963_0000919 3300044694 Bacteria 15004
136 Ga0466963_0025672 3300044694 Bacteria 3760
137 Ga0466963_0272875 3300044694 Bacteria 1188
138 Ga0466963_1234839 3300044694 Unclassified 525
139 Ga0466964_0605459 3300044706 Bacteria 601
140 Ga0466971_0004243 3300044719 Bacteria 6179
141 Ga0466971_0016906 3300044719 Bacteria 3223
142 Ga0466971_0026085 3300044719 Bacteria 2610
143 Ga0466968_0157383 3300044735 Bacteria 1047
144 Ga0466968_0305176 3300044735 Bacteria 766
145 Ga0466968_0678422 3300044735 Bacteria 525
146 Ga0466970_0095986 3300044765 Bacteria 1612
147 Ga0466970_0198531 3300044765 Bacteria 1116
148 Ga0466957_0027540 3300044842 Bacteria 3378
149 Ga0466957_0150382 3300044842 Bacteria 1505
150 Ga0466957_0585601 3300044842 Bacteria 780
151 Ga0466957_0931017 3300044842 Bacteria 622
152 Ga0466959_0005650 3300045049 Bacteria 8605
153 Ga0466959_0013525 3300045049 Bacteria 5915
154 Ga0466959_0083187 3300045049 Bacteria 2305
155 Ga0466959_0147403 3300045049 Bacteria 1660
156 Ga0466959_0245251 3300045049 Bacteria 1236
157 Ga0466959_0534401 3300045049 Bacteria 791
158 Ga0466959_0645612 3300045049 Bacteria 711
159 Ga0466958_0008631 3300045836 Bacteria 5657
160 Ga0466958_0009789 3300045836 Bacteria 5348
161 Ga0466958_0016085 3300045836 Bacteria 4303
162 Ga0466958_0023519 3300045836 Bacteria 3618
163 Ga0466967_0004221 3300045976 Bacteria 9639
164 Ga0466967_0436001 3300045976 Bacteria 1279
165 Ga0466967_0768369 3300045976 Bacteria 956
166 Ga0466967_1102117 3300045976 Bacteria 791
167 Ga0466967_1387476 3300045976 Bacteria 700
168 Ga0495605_0149578 3300046474 Bacteria 1043
169 Ga0495596_0070510 3300046500 Bacteria 1358
170 Ga0495596_0349461 3300046500 Bacteria 576
171 Ga0495637_0316032 3300046520 Bacteria 552
172 Ga0495663_0308382 3300046525 Bacteria 571
173 Ga0495642_0264109 3300046528 Bacteria 753
174 Ga0495654_0224391 3300046530 Bacteria 793
175 Ga0495633_0410036 3300046558 Bacteria 613
176 Ga0495667_0684729 3300046559 Bacteria 636
177 Ga0495656_0433198 3300046615 Bacteria 691
178 Ga0495611_0408021 3300046648 Bacteria 621
179 Ga0495661_0550400 3300046665 Bacteria 546
180 Ga0495657_0212495 3300046675 Bacteria 1176
181 Ga0495589_0295074 3300046794 Bacteria 752
182 Ga0495679_094424 3300047446 Bacteria 836
183 Ga0495602_0678788 3300048088 Bacteria 701
184 Ga0495602_1102522 3300048088 Bacteria 520
185 Ga0496100_0219995 3300048903 Bacteria 1393
186 Ga0496104_0015945 3300048907 Bacteria 6820
187 Ga0496105_0106776 3300048908 Bacteria 2311
188 Ga0496106_0010058 3300048909 Bacteria 6988
189 Ga0496107_0020296 3300048910 Bacteria 4692
190 Ga0496108_0010464 3300048911 Bacteria 7536
191 Ga0496110_0008999 3300048913 Bacteria 8054
192 Ga0496111_0179728 3300048914 Bacteria 1572
193 Ga0496112_0230982 3300048915 Bacteria 1804
194 Ga0496113_0006602 3300048916 Bacteria 7376
195 Ga0496115_0178128 3300048918 Bacteria 1758
196 Ga0496126_0261264 3300048929 Bacteria 1440
197 Ga0501039_0504868 3300049575 Bacteria 950
198 Ga0501067_0800463 3300049583 Bacteria 531
199 Ga0501198_162272 3300049649 Bacteria 500
200 nmdc:mga00v17_67357_c1 3300050491 Bacteria 2212
201 nmdc:mga05p37_1098750_c1 3300050507 Bacteria 833
202 nmdc:mga05p37_189314_c1 3300050507 Bacteria 2499
203 nmdc:mga05p37_430843_c1 3300050507 Bacteria 1532
204 nmdc:mga05p37_686799_c1 3300050507 Bacteria 1140
205 nmdc:mga05p37_726159_c1 3300050507 Bacteria 1099
206 nmdc:mga0qj67_104189_c1 3300050509 Bacteria 2288
207 nmdc:mga06r32_79259_c1 3300050510 Bacteria 3195
208 nmdc:mga08y16_47237_c1 3300050511 Bacteria 4506
209 nmdc:mga08y16_49525_c1 3300050511 Bacteria 4397
210 nmdc:mga08y16_742231_c1 3300050511 Bacteria 978
211 nmdc:mga0n895_641819_c1 3300050512 Bacteria 1061
212 nmdc:mga0n895_97819_c1 3300050512 Bacteria 2941
213 nmdc:mga0rr50_694341_c1 3300050513 Bacteria 869
214 nmdc:mga08x19_1298211_c1 3300050514 Bacteria 515
215 nmdc:mga08x19_807193_c1 3300050514 Bacteria 666
216 nmdc:mga08x19_932543_c1 3300050514 Bacteria 617
217 nmdc:mga0a205_274887_c1 3300050515 Bacteria 1561
218 Ga0495655_0037770 3300053083 Bacteria 1215
219 Ga0495655_0039966 3300053083 Bacteria 1192
220 Ga0501084_0261930 3300054114 Bacteria 1460
221 Ga0590071_150834 3300059421 Bacteria 602
222 Ga0466962_0008623 3300061719 Bacteria 4887
223 Ga0466962_0118465 3300061719 Bacteria 1277
224 Ga0466962_0144408 3300061719 Bacteria 1153
225 Ga0466962_0166783 3300061719 Bacteria 1071
226 Ga0466962_0696423 3300061719 Bacteria 521
227 2623586363 2622736626 Bacteria 7181580
228 2856860232 2856858025 Bacteria 7255264
229 2858875250 2858868258 Bacteria 7683772
230 649810935 649633069 Bacteria 6962533
231 8003862378 8003856774 Bacteria 7675274
232 Ga0395900_1644683
233 Ga0070714_100894411
234 Ga0070714_101432230
235 Ga0070714_101508073
236 Ga0070707_100103010
237 Ga0070707_100886328
238 Ga0070684_100074115
239 Ga0070684_101055823
240 Ga0070697_101536243
241 Ga0068853_100421253
242 Ga0070696_100772475
243 Ga0068854_101586188
244 Ga0068856_100259872
245 Ga0068859_102047186
246 Ga0068851_10064963
247 Ga0068863_100926951
248 Ga0070717_10007823
249 Ga0070717_10281552
250 Ga0070717_12097839
251 Ga0075365_10706523
252 Ga0075364_10254636
253 Ga0070716_100809274
254 Ga0070712_101193160
255 Ga0075428_100461007
256 Ga0075430_100041196
257 Ga0075431_100022214
258 Ga0075433_10590750
259 Ga0075434_100038651
260 Ga0075434_100746300
261 Ga0075429_101253567
262 Ga0075436_100307169
263 Ga0075436_100525660
264 Ga0097620_102047002
265 Ga0075435_100020968
266 Ga0111539_10011829
267 Ga0111539_10015829
268 Ga0111539_10335716
269 Ga0105245_11294869
270 Ga0105247_10210985
271 Ga0114129_10179674
272 Ga0114129_10407644
273 Ga0114129_10929410
274 Ga0114129_11126314
275 Ga0114129_11972488
276 Ga0114129_12075238
277 Ga0213874_10029235
278 Ga0213874_10074566
279 Ga0213874_10078811
280 Ga0213874_10214655
281 Ga0213876_10018275
282 Ga0213876_10058444
283 Ga0213876_10115638
284 Ga0213876_10273564
285 Ga0213875_10054950
286 Ga0213875_10060594
287 Ga0213875_10109525
288 Ga0213875_10305674
289 Ga0207692_10127178
290 Ga0207710_10216149
291 Ga0207693_11049475
292 Ga0207649_10961944
293 Ga0207646_10106275
294 Ga0207646_10678978
295 Ga0207646_11185426
296 Ga0207664_10315231
297 Ga0207664_10426369
298 Ga0207664_11458507
299 Ga0207689_10810646
300 Ga0207661_10010870
301 Ga0207679_10280077
302 Ga0207639_10390370
303 Ga0207702_10302737
304 Ga0207641_10986297
305 Ga0207428_10029865
306 Ga0207428_10224696
307 Ga0307409_100109971
308 Ga0307416_100791838
309 Ga0373951_0169726
310 Ga0373939_0021953
311 Ga0373955_0082767
312 Ga0373942_0074476
313 Ga0373961_0449008
314 Ga0373931_0825196
315 Ga0395898_0171687
316 Ga0395898_0612380
317 Ga0395898_0640563
318 Ga0395905_0380002
319 Ga0436364_0040297
320 Ga0436364_0609927
321 Ga0436364_0905627
322 Ga0436364_1295205
323 Ga0436364_1342407
324 Ga0395901_2148911
325 Ga0436365_0009199
326 Ga0436365_0212021
327 Ga0436365_0281194
328 Ga0436365_0298034
329 Ga0436365_0729386
330 Ga0436365_1612362
331 Ga0436365_1732443
332 Ga0436360_0638340
333 Ga0436361_0250573
334 Ga0436363_0106238
335 Ga0436363_0157123
336 Ga0436363_0359231
337 Ga0436363_0399909
338 Ga0436363_0449031
339 Ga0436363_0460159
340 Ga0436363_0910664
341 Ga0436363_1040769
342 Ga0436363_1361509
343 Ga0436363_1377217
344 Ga0436363_1419250
345 Ga0436363_1495424
346 Ga0436363_1659321
347 Ga0436362_0062445
348 Ga0436362_0467477
349 Ga0436362_0704426
350 Ga0436362_0716136
351 Ga0436362_0763522
352 Ga0436362_0901821
353 Ga0436362_1278535
354 Ga0439461_0226174
355 Ga0439432_195076
356 Ga0439434_0129429
357 Ga0466969_0269077
358 Ga0466965_0046529
359 Ga0466965_0156237
360 Ga0466965_0405067
361 Ga0466965_0571726
362 Ga0466966_0027404
363 Ga0466966_0258246
364 Ga0466961_0069337
365 Ga0466961_0581912
366 Ga0466963_0000919
367 Ga0466963_0025672
368 Ga0466963_0272875
369 Ga0466963_1234839
370 Ga0466964_0605459
371 Ga0466971_0004243
372 Ga0466971_0016906
373 Ga0466971_0026085
374 Ga0466968_0157383
375 Ga0466968_0305176
376 Ga0466968_0678422
377 Ga0466970_0095986
378 Ga0466970_0198531
379 Ga0466957_0027540
380 Ga0466957_0150382
381 Ga0466957_0585601
382 Ga0466957_0931017
383 Ga0466959_0005650
384 Ga0466959_0013525
385 Ga0466959_0083187
386 Ga0466959_0147403
387 Ga0466959_0245251
388 Ga0466959_0534401
389 Ga0466959_0645612
390 Ga0466958_0008631
391 Ga0466958_0009789
392 Ga0466958_0016085
393 Ga0466958_0023519
394 Ga0466967_0004221
395 Ga0466967_0436001
396 Ga0466967_0768369
397 Ga0466967_1102117
398 Ga0466967_1387476
399 Ga0495605_0149578
400 Ga0495596_0070510
401 Ga0495596_0349461
402 Ga0495637_0316032
403 Ga0495663_0308382
404 Ga0495642_0264109
405 Ga0495654_0224391
406 Ga0495633_0410036
407 Ga0495667_0684729
408 Ga0495656_0433198
409 Ga0495611_0408021
410 Ga0495661_0550400
411 Ga0495657_0212495
412 Ga0495589_0295074
413 Ga0495679_094424
414 Ga0495602_0678788
415 Ga0495602_1102522
416 Ga0496100_0219995
417 Ga0496104_0015945
418 Ga0496105_0106776
419 Ga0496106_0010058
420 Ga0496107_0020296
421 Ga0496108_0010464
422 Ga0496110_0008999
423 Ga0496111_0179728
424 Ga0496112_0230982
425 Ga0496113_0006602
426 Ga0496115_0178128
427 Ga0496126_0261264
428 Ga0501039_0504868
429 Ga0501067_0800463
430 Ga0501198_162272
431 nmdc:mga00v17_67357_c1
432 nmdc:mga05p37_1098750_c1
433 nmdc:mga05p37_189314_c1
434 nmdc:mga05p37_430843_c1
435 nmdc:mga05p37_686799_c1
436 nmdc:mga05p37_726159_c1
437 nmdc:mga0qj67_104189_c1
438 nmdc:mga06r32_79259_c1
439 nmdc:mga08y16_47237_c1
440 nmdc:mga08y16_49525_c1
441 nmdc:mga08y16_742231_c1
442 nmdc:mga0n895_641819_c1
443 nmdc:mga0n895_97819_c1
444 nmdc:mga0rr50_694341_c1
445 nmdc:mga08x19_1298211_c1
446 nmdc:mga08x19_807193_c1
447 nmdc:mga08x19_932543_c1
448 nmdc:mga0a205_274887_c1
449 Ga0495655_0037770
450 Ga0495655_0039966
451 Ga0501084_0261930
452 Ga0590071_150834
453 Ga0466962_0008623
454 Ga0466962_0118465
455 Ga0466962_0144408
456 Ga0466962_0166783
457 Ga0466962_0696423
458 2623586363
459 2856860232
460 2858875250
461 649810935
462 8003862378

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02583

Trns_repr_metal

Metal-sensitive transcriptional repressor

27

111

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
4uig-assembly1.cif.gz_A structure of the copper sensitive operon repressor from streptomyces lividans at ph6 0.9439 17 97
4adz-assembly1.cif.gz_A-2 crystal structure of the apo form of a copper-sensitive operon regulator (csor) protein from streptomyces lividans 0.9237 17 98
6ahx-assembly1.cif.gz_A-2 copper-sensing operon regulator protein (csorgz) 0.9113 17 73
2hh7-assembly1.cif.gz_A crystal structure of cu(i) bound csor from mycobacterium tuberculosis. 0.8866 14 93
7mq1-assembly1.cif.gz_B c9a streptococcus pneumoniae cstr in the reduced state, space group c2 0.8714 18 93
ID Description Score Start End Superfamily
af_O07434_7_96_1.20.58.1000 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Metal-sensitive repressor, helix protomer 0.9524 17 98 1.20.58.1000
4uigA00 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Metal-sensitive repressor, helix protomer 0.9439 17 97 1.20.58.1000
4adzA00 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Metal-sensitive repressor, helix protomer 0.9237 17 98 1.20.58.1000
af_P64530_1_90_1.20.58.1000 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Metal-sensitive repressor, helix protomer 0.9075 17 97 1.20.58.1000
af_Q2FWG9_1_96_1.20.58.1000 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Metal-sensitive repressor, helix protomer 0.9052 17 96 1.20.58.1000
ID Description Score Start End GO Terms
AF-A0A0Q6JGL6-F1-model_v4 Transcriptional regulator 0.9684 18 98 GO:0003677
GO:0005737
GO:0045892
GO:0046872
AF-A0A143Q4A3-F1-model_v4 Copper-sensing transcriptional repressor CsoR 0.9684 18 98 GO:0003677
GO:0005737
GO:0045892
GO:0046872
AF-A0A7C3QXP0-F1-model_v4 Metal-sensitive transcriptional regulator 0.9619 18 100 GO:0003677
GO:0005737
GO:0045892
GO:0046872
AF-A0A2D8WW83-F1-model_v4 Transcriptional regulator 0.9579 17 100 GO:0003677
GO:0005737
GO:0045892
GO:0046872
AF-A0A2A5ISM2-F1-model_v4 Transcriptional regulator 0.9543 17 96 GO:0003677
GO:0005737
GO:0045892
GO:0046872

Map