F343941

General Info

Members Datasets Scaffolds Average Seq Length
231 98 462 504

Family's Representative Sequence

Representative Sequence 3300006880|Ga0075429_100051621|Ga0075429_1000516212
Length 487
Sequence VPKFYLTTAIDYSNGEPHLGHALEKIGADCIARYRRLRGDSVHFVMGMDENAQKVAQAAERAGVPTAEWVRSLAERFDATWRRLLCSHDDWIRTTEPRHHRATIALIERIAERSPDDLYSGCIGCEEFKQEAQIINGHCEEHPNLELIHTKEQNHFFRLSRYRDEVLRLIQSGELSVEPTIRLQDISISRQRLSWGIPFPGDSSQTVYVWFDALINYLSATGFPEAGYERLWPADLHVIGKGISRFHCIIWPAMLLSAGVALPRKVWAHGYVQWSGAKVSKSAGTAVSLDEAIDRHGPDALRYFLLREVGFEADGNFTWERFDERYTADLADGLGNLASRTLAMLGRYRDGKVPDAAPATRLHDAGSRCLSRYAAAMDRNDLRGGAEAAWELVSEANLYIQQTAPWTLAKEGREEELDAALAALAACLYRLAVLMTPFVPGKAQTLWQALGQRGDSTTAQWTSLEAPRVAGTLTTKPEVLFPKPTPT

Samples

Sample ID Description Type Environment
1 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
2 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
3 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
4 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
5 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
6 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
7 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
8 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
15 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
16 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
17 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
18 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
21 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
22 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
23 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
26 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
27 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
28 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
29 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
31 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
35 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
36 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
37 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
48 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
49 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
50 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
51 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
52 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
53 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
54 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
55 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
56 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
57 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
58 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
59 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
60 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
61 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
62 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
63 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
64 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
65 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
66 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
67 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
68 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
69 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
70 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
71 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
72 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
73 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
74 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
75 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
76 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
77 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
79 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
80 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
81 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
82 3300049677 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_A_3_control Metagenome Rhizosphere
83 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
84 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
85 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
86 3300049769 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_B_4_drought Metagenome Rhizosphere
87 3300049771 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_B_4_control Metagenome Rhizosphere
88 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
89 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
90 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
91 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
92 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
93 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
94 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
95 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
96 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
97 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
98 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 8.23
Rhizosphere 91.77
Stem 0
Stem Tuber 0
Unclassified 3.03

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075429_100051621 3300006880 Bacteria 3578
2 Ga0070680_100001070 3300005336 Bacteria 19651
3 Ga0070680_100082507 3300005336 Bacteria 2653
4 Ga0070680_100103134 3300005336 Unclassified 2370
5 Ga0070703_10000141 3300005406 Bacteria 37278
6 Ga0070709_10004249 3300005434 Bacteria 7725
7 Ga0070701_10005120 3300005438 Bacteria 5385
8 Ga0070711_100000044 3300005439 Bacteria 83348
9 Ga0070711_100004065 3300005439 Bacteria 8600
10 Ga0070705_100005506 3300005440 Bacteria 6173
11 Ga0070705_100007260 3300005440 Bacteria 5450
12 Ga0070705_100012532 3300005440 Bacteria 4312
13 Ga0070705_100014633 3300005440 Bacteria 4041
14 Ga0070694_100000349 3300005444 Bacteria 24772
15 Ga0070694_100011762 3300005444 Bacteria 5425
16 Ga0070694_100012643 3300005444 Bacteria 5255
17 Ga0070694_100017861 3300005444 Bacteria 4488
18 Ga0070708_100013800 3300005445 Bacteria 6631
19 Ga0070708_100018906 3300005445 Bacteria 5774
20 Ga0070708_100018920 3300005445 Bacteria 5772
21 Ga0070708_100028641 3300005445 Bacteria 4795
22 Ga0070708_100031142 3300005445 Bacteria 4615
23 Ga0070708_100037733 3300005445 Bacteria 4218
24 Ga0070708_100067158 3300005445 Bacteria 3219
25 Ga0070706_100001803 3300005467 Bacteria 22182
26 Ga0070706_100028941 3300005467 Bacteria 5103
27 Ga0070706_100032312 3300005467 Bacteria 4827
28 Ga0070706_100291614 3300005467 Bacteria 1522
29 Ga0070707_100000266 3300005468 Bacteria 51948
30 Ga0070707_100001254 3300005468 Bacteria 24951
31 Ga0070707_100006175 3300005468 Bacteria 11160
32 Ga0070698_100001523 3300005471 Bacteria 25707
33 Ga0070698_100050529 3300005471 Bacteria 4238
34 Ga0070699_100001124 3300005518 Bacteria 24927
35 Ga0070699_100012845 3300005518 Bacteria 7218
36 Ga0070699_100013219 3300005518 Bacteria 7117
37 Ga0070699_100023516 3300005518 Bacteria 5309
38 Ga0070697_100006687 3300005536 Bacteria 8946
39 Ga0070697_100020132 3300005536 Bacteria 5274
40 Ga0070697_100030952 3300005536 Bacteria 4301
41 Ga0070697_100073089 3300005536 Bacteria 2815
42 Ga0070697_100084973 3300005536 Bacteria 2611
43 Ga0070697_100151831 3300005536 Bacteria 1952
44 Ga0070686_100016210 3300005544 Bacteria 4332
45 Ga0070695_100004823 3300005545 Bacteria 7937
46 Ga0070695_100021843 3300005545 Bacteria 3921
47 Ga0070695_100048797 3300005545 Bacteria 2708
48 Ga0070696_100000972 3300005546 Bacteria 18569
49 Ga0070696_100001632 3300005546 Bacteria 14723
50 Ga0070696_100005183 3300005546 Bacteria 8712
51 Ga0070696_100013566 3300005546 Bacteria 5469
52 Ga0070696_100034957 3300005546 Bacteria 3458
53 Ga0070696_100083011 3300005546 Bacteria 2272
54 Ga0070704_100000053 3300005549 Bacteria 37727
55 Ga0070704_100003237 3300005549 Bacteria 9305
56 Ga0070704_100039797 3300005549 Bacteria 3230
57 Ga0070704_100044350 3300005549 Bacteria 3089
58 Ga0070704_100101964 3300005549 Bacteria 2164
59 Ga0068859_100009362 3300005617 Bacteria 9890
60 Ga0068864_100060655 3300005618 Bacteria 3274
61 Ga0068864_100075558 3300005618 Bacteria 2942
62 Ga0068863_100035209 3300005841 Bacteria 4769
63 Ga0081455_10060245 3300005937 Bacteria 3201
64 Ga0081538_10045982 3300005981 Bacteria 2699
65 Ga0075428_100017303 3300006844 Bacteria 7967
66 Ga0075428_100057131 3300006844 Bacteria 4273
67 Ga0075428_100060589 3300006844 Bacteria 4145
68 Ga0075428_100094986 3300006844 Bacteria 3250
69 Ga0075431_100085396 3300006847 Bacteria 3258
70 Ga0075433_10004644 3300006852 Bacteria 10714
71 Ga0075433_10013399 3300006852 Bacteria 6665
72 Ga0075433_10022900 3300006852 Bacteria 5250
73 Ga0075433_10056310 3300006852 Bacteria 3433
74 Ga0075434_100019038 3300006871 Bacteria 6636
75 Ga0075434_100034707 3300006871 Bacteria 4983
76 Ga0075434_100042360 3300006871 Bacteria 4513
77 Ga0075434_100092824 3300006871 Bacteria 3021
78 Ga0075429_100000196 3300006880 Bacteria 40118
79 Ga0075436_100001806 3300006914 Bacteria 14669
80 Ga0075436_100005939 3300006914 Bacteria 8388
81 Ga0075436_100043641 3300006914 Bacteria 3092
82 Ga0075436_100055138 3300006914 Bacteria 2744
83 Ga0097620_100009362 3300006931 Bacteria 9890
84 Ga0075435_100000602 3300007076 Bacteria 21989
85 Ga0075435_100173932 3300007076 Bacteria 1817
86 Ga0099794_10000146 3300007265 Bacteria 26401
87 Ga0099794_10034820 3300007265 Bacteria 2375
88 Ga0111539_10105104 3300009094 Bacteria 3313
89 Ga0114129_10000136 3300009147 Bacteria 76070
90 Ga0114129_10066072 3300009147 Bacteria 5045
91 Ga0114129_10381605 3300009147 Bacteria 1861
92 Ga0114129_10418762 3300009147 Bacteria 1762
93 Ga0105248_10244674 3300009177 Bacteria 2019
94 Ga0105249_10160090 3300009553 Bacteria 2175
95 Ga0105239_10009754 3300010375 Bacteria 10796
96 Ga0207653_10000041 3300025885 Bacteria 96988
97 Ga0207653_10006832 3300025885 Bacteria 3564
98 Ga0207684_10000793 3300025910 Bacteria 36573
99 Ga0207684_10024753 3300025910 Bacteria 5117
100 Ga0207684_10026482 3300025910 Bacteria 4943
101 Ga0207684_10053320 3300025910 Bacteria 3433
102 Ga0207684_10177081 3300025910 Bacteria 1838
103 Ga0207707_10033901 3300025912 Bacteria 4468
104 Ga0207663_10000062 3300025916 Bacteria 53663
105 Ga0207652_10073591 3300025921 Unclassified 2973
106 Ga0207646_10002204 3300025922 Bacteria 23196
107 Ga0207646_10002716 3300025922 Bacteria 20737
108 Ga0207646_10002961 3300025922 Bacteria 19662
109 Ga0207646_10077255 3300025922 Bacteria 2976
110 Ga0207665_10015884 3300025939 Bacteria 4942
111 Ga0207665_10068638 3300025939 Bacteria 2416
112 Ga0207679_10008283 3300025945 Bacteria 6620
113 Ga0207679_10091511 3300025945 Bacteria 2354
114 Ga0207641_10039753 3300026088 Bacteria 3935
115 Ga0209588_1000268 3300027671 Bacteria 13787
116 Ga0209588_1002741 3300027671 Bacteria 4813
117 Ga0307408_100020951 3300031548 Bacteria 4419
118 Ga0307408_100028675 3300031548 Bacteria 3849
119 Ga0307408_100076982 3300031548 Bacteria 2483
120 Ga0307405_10027519 3300031731 Bacteria 3298
121 Ga0307413_10014693 3300031824 Bacteria 3987
122 Ga0307413_10038255 3300031824 Bacteria 2779
123 Ga0307413_10074852 3300031824 Bacteria 2146
124 Ga0307410_10015416 3300031852 Bacteria 4532
125 Ga0307410_10040386 3300031852 Bacteria 3070
126 Ga0307406_10040198 3300031901 Bacteria 2907
127 Ga0307406_10040977 3300031901 Bacteria 2883
128 Ga0307406_10051892 3300031901 Bacteria 2606
129 Ga0307406_10055432 3300031901 Bacteria 2534
130 Ga0307412_10016507 3300031911 Bacteria 4400
131 Ga0307412_10115711 3300031911 Bacteria 1922
132 Ga0307409_100004334 3300031995 Bacteria 7950
133 Ga0307409_100022220 3300031995 Bacteria 4368
134 Ga0307409_100166362 3300031995 Bacteria 1936
135 Ga0307416_100002674 3300032002 Bacteria 10315
136 Ga0307416_100008182 3300032002 Bacteria 6723
137 Ga0307416_100011313 3300032002 Bacteria 5939
138 Ga0307416_100030699 3300032002 Bacteria 4035
139 Ga0307416_100047575 3300032002 Bacteria 3396
140 Ga0307416_100121945 3300032002 Bacteria 2325
141 Ga0307414_10042838 3300032004 Bacteria 3079
142 Ga0307414_10049259 3300032004 Bacteria 2912
143 Ga0307414_10070542 3300032004 Bacteria 2516
144 Ga0307414_10094937 3300032004 Bacteria 2227
145 Ga0307411_10010397 3300032005 Bacteria 4958
146 Ga0307415_100009690 3300032126 Bacteria 5418
147 Ga0307415_100047540 3300032126 Bacteria 2889
148 Ga0307415_100069965 3300032126 Bacteria 2462
149 Ga0307415_100099167 3300032126 Unclassified 2131
150 Ga0373931_0037901 3300035691 Bacteria 2519
151 Ga0451577_0050567 3300042876 Bacteria 3710
152 Ga0451577_0214835 3300042876 Bacteria 1738
153 Ga0453684_0162322 3300044712 Bacteria 2642
154 Ga0451576_0003678 3300045051 Bacteria 20806
155 Ga0451576_0006611 3300045051 Bacteria 14173
156 Ga0451576_0032182 3300045051 Bacteria 5588
157 Ga0451576_0108500 3300045051 Bacteria 2888
158 Ga0495580_0099864 3300046472 Bacteria 2019
159 Ga0496101_0062249 3300048904 Bacteria 2713
160 Ga0496102_0077069 3300048905 Bacteria 3068
161 Ga0496102_0082155 3300048905 Unclassified 2972
162 Ga0496103_0091185 3300048906 Bacteria 1923
163 Ga0496104_0148987 3300048907 Bacteria 2247
164 Ga0496106_0061789 3300048909 Bacteria 2843
165 Ga0496108_0116332 3300048911 Bacteria 2290
166 Ga0496109_0003563 3300048912 Bacteria 13001
167 Ga0496109_0010712 3300048912 Bacteria 7845
168 Ga0496109_0112453 3300048912 Bacteria 2532
169 Ga0496110_0076059 3300048913 Bacteria 2984
170 Ga0496110_0163456 3300048913 Bacteria 2018
171 Ga0496110_0225625 3300048913 Bacteria 1703
172 Ga0496111_0016618 3300048914 Bacteria 5074
173 Ga0496112_0045781 3300048915 Bacteria 4288
174 Ga0496112_0108179 3300048915 Bacteria 2750
175 Ga0496113_0024070 3300048916 Bacteria 4323
176 Ga0496113_0033869 3300048916 Bacteria 3723
177 Ga0496115_0062286 3300048918 Bacteria 3009
178 Ga0501038_0025744 3300049574 Bacteria 5242
179 Ga0501042_0030146 3300049578 Bacteria 3830
180 Ga0501046_0024537 3300049580 Bacteria 4944
181 Ga0501067_0075478 3300049583 Bacteria 1868
182 Ga0501072_0014314 3300049588 Bacteria 6080
183 Ga0501076_0043105 3300049592 Bacteria 3554
184 Ga0501077_0012120 3300049593 Bacteria 5397
185 Ga0501077_0019831 3300049593 Bacteria 4253
186 Ga0501077_0040780 3300049593 Bacteria 2956
187 Ga0501247_000645 3300049677 Bacteria 2921
188 Ga0501079_0001685 3300049741 Bacteria 15715
189 Ga0501079_0022496 3300049741 Bacteria 4835
190 Ga0501081_0003218 3300049743 Bacteria 10383
191 Ga0501268_000153 3300049765 Bacteria 6226
192 Ga0501272_001287 3300049769 Bacteria 2358
193 Ga0501274_002935 3300049771 Bacteria 1353
194 Ga0501045_0022179 3300049824 Bacteria 4544
195 nmdc:mga05p37_117943_c1 3300050507 Bacteria 3261
196 nmdc:mga05p37_158188_c1 3300050507 Bacteria 2768
197 nmdc:mga05p37_99991_c1 3300050507 Bacteria 3572
198 nmdc:mga09592_1330_c1 3300050508 Bacteria 19792
199 nmdc:mga09592_3392_c1 3300050508 Bacteria 12874
200 nmdc:mga09592_61237_c1 3300050508 Unclassified 3183
201 nmdc:mga06r32_199731_c1 3300050510 Bacteria 1987
202 nmdc:mga06r32_23213_c1 3300050510 Bacteria 5737
203 nmdc:mga06r32_29280_c1 3300050510 Bacteria 5159
204 nmdc:mga06r32_39210_c1 3300050510 Bacteria 4494
205 nmdc:mga0n895_101666_c1 3300050512 Bacteria 2885
206 nmdc:mga0n895_165477_c1 3300050512 Bacteria 2243
207 nmdc:mga0n895_21069_c1 3300050512 Bacteria 6092
208 nmdc:mga0n895_238412_c1 3300050512 Bacteria 1846
209 nmdc:mga0n895_4352_c1 3300050512 Bacteria 11610
210 nmdc:mga0n895_6682_c1 3300050512 Bacteria 9832
211 nmdc:mga0n895_8046_c1 3300050512 Bacteria 9097
212 nmdc:mga0rr50_101384_c1 3300050513 Bacteria 2263
213 nmdc:mga0rr50_17444_c2 3300050513 Bacteria 4326
214 nmdc:mga0rr50_182012_c1 3300050513 Bacteria 1718
215 nmdc:mga0rr50_25993_c1 3300050513 Bacteria 4078
216 nmdc:mga0rr50_69794_c1 3300050513 Bacteria 2676
217 nmdc:mga08x19_11207_c1 3300050514 Bacteria 5396
218 nmdc:mga08x19_13590_c1 3300050514 Bacteria 4924
219 nmdc:mga08x19_3421_c1 3300050514 Bacteria 9465
220 nmdc:mga08x19_55120_c1 3300050514 Bacteria 2561
221 nmdc:mga08x19_953_c1 3300050514 Bacteria 18175
222 nmdc:mga0a205_108867_c1 3300050515 Bacteria 2669
223 nmdc:mga0a205_11706_c1 3300050515 Bacteria 8090
224 nmdc:mga0a205_21501_c1 3300050515 Bacteria 6101
225 nmdc:mga0a205_4669_c1 3300050515 Bacteria 12287
226 nmdc:mga0a205_56447_c1 3300050515 Bacteria 3791
227 nmdc:mga0a205_9648_c1 3300050515 Bacteria 8837
228 Ga0501084_0067026 3300054114 Bacteria 3004
229 Ga0501084_0157539 3300054114 Unclassified 1915
230 Ga0501082_0032076 3300060353 Bacteria 4532
231 Ga0530510_0131160 3300061734 Unclassified 1844
232 Ga0075429_100051621
233 Ga0070680_100001070
234 Ga0070680_100082507
235 Ga0070680_100103134
236 Ga0070703_10000141
237 Ga0070709_10004249
238 Ga0070701_10005120
239 Ga0070711_100000044
240 Ga0070711_100004065
241 Ga0070705_100005506
242 Ga0070705_100007260
243 Ga0070705_100012532
244 Ga0070705_100014633
245 Ga0070694_100000349
246 Ga0070694_100011762
247 Ga0070694_100012643
248 Ga0070694_100017861
249 Ga0070708_100013800
250 Ga0070708_100018906
251 Ga0070708_100018920
252 Ga0070708_100028641
253 Ga0070708_100031142
254 Ga0070708_100037733
255 Ga0070708_100067158
256 Ga0070706_100001803
257 Ga0070706_100028941
258 Ga0070706_100032312
259 Ga0070706_100291614
260 Ga0070707_100000266
261 Ga0070707_100001254
262 Ga0070707_100006175
263 Ga0070698_100001523
264 Ga0070698_100050529
265 Ga0070699_100001124
266 Ga0070699_100012845
267 Ga0070699_100013219
268 Ga0070699_100023516
269 Ga0070697_100006687
270 Ga0070697_100020132
271 Ga0070697_100030952
272 Ga0070697_100073089
273 Ga0070697_100084973
274 Ga0070697_100151831
275 Ga0070686_100016210
276 Ga0070695_100004823
277 Ga0070695_100021843
278 Ga0070695_100048797
279 Ga0070696_100000972
280 Ga0070696_100001632
281 Ga0070696_100005183
282 Ga0070696_100013566
283 Ga0070696_100034957
284 Ga0070696_100083011
285 Ga0070704_100000053
286 Ga0070704_100003237
287 Ga0070704_100039797
288 Ga0070704_100044350
289 Ga0070704_100101964
290 Ga0068859_100009362
291 Ga0068864_100060655
292 Ga0068864_100075558
293 Ga0068863_100035209
294 Ga0081455_10060245
295 Ga0081538_10045982
296 Ga0075428_100017303
297 Ga0075428_100057131
298 Ga0075428_100060589
299 Ga0075428_100094986
300 Ga0075431_100085396
301 Ga0075433_10004644
302 Ga0075433_10013399
303 Ga0075433_10022900
304 Ga0075433_10056310
305 Ga0075434_100019038
306 Ga0075434_100034707
307 Ga0075434_100042360
308 Ga0075434_100092824
309 Ga0075429_100000196
310 Ga0075436_100001806
311 Ga0075436_100005939
312 Ga0075436_100043641
313 Ga0075436_100055138
314 Ga0097620_100009362
315 Ga0075435_100000602
316 Ga0075435_100173932
317 Ga0099794_10000146
318 Ga0099794_10034820
319 Ga0111539_10105104
320 Ga0114129_10000136
321 Ga0114129_10066072
322 Ga0114129_10381605
323 Ga0114129_10418762
324 Ga0105248_10244674
325 Ga0105249_10160090
326 Ga0105239_10009754
327 Ga0207653_10000041
328 Ga0207653_10006832
329 Ga0207684_10000793
330 Ga0207684_10024753
331 Ga0207684_10026482
332 Ga0207684_10053320
333 Ga0207684_10177081
334 Ga0207707_10033901
335 Ga0207663_10000062
336 Ga0207652_10073591
337 Ga0207646_10002204
338 Ga0207646_10002716
339 Ga0207646_10002961
340 Ga0207646_10077255
341 Ga0207665_10015884
342 Ga0207665_10068638
343 Ga0207679_10008283
344 Ga0207679_10091511
345 Ga0207641_10039753
346 Ga0209588_1000268
347 Ga0209588_1002741
348 Ga0307408_100020951
349 Ga0307408_100028675
350 Ga0307408_100076982
351 Ga0307405_10027519
352 Ga0307413_10014693
353 Ga0307413_10038255
354 Ga0307413_10074852
355 Ga0307410_10015416
356 Ga0307410_10040386
357 Ga0307406_10040198
358 Ga0307406_10040977
359 Ga0307406_10051892
360 Ga0307406_10055432
361 Ga0307412_10016507
362 Ga0307412_10115711
363 Ga0307409_100004334
364 Ga0307409_100022220
365 Ga0307409_100166362
366 Ga0307416_100002674
367 Ga0307416_100008182
368 Ga0307416_100011313
369 Ga0307416_100030699
370 Ga0307416_100047575
371 Ga0307416_100121945
372 Ga0307414_10042838
373 Ga0307414_10049259
374 Ga0307414_10070542
375 Ga0307414_10094937
376 Ga0307411_10010397
377 Ga0307415_100009690
378 Ga0307415_100047540
379 Ga0307415_100069965
380 Ga0307415_100099167
381 Ga0373931_0037901
382 Ga0451577_0050567
383 Ga0451577_0214835
384 Ga0453684_0162322
385 Ga0451576_0003678
386 Ga0451576_0006611
387 Ga0451576_0032182
388 Ga0451576_0108500
389 Ga0495580_0099864
390 Ga0496101_0062249
391 Ga0496102_0077069
392 Ga0496102_0082155
393 Ga0496103_0091185
394 Ga0496104_0148987
395 Ga0496106_0061789
396 Ga0496108_0116332
397 Ga0496109_0003563
398 Ga0496109_0010712
399 Ga0496109_0112453
400 Ga0496110_0076059
401 Ga0496110_0163456
402 Ga0496110_0225625
403 Ga0496111_0016618
404 Ga0496112_0045781
405 Ga0496112_0108179
406 Ga0496113_0024070
407 Ga0496113_0033869
408 Ga0496115_0062286
409 Ga0501038_0025744
410 Ga0501042_0030146
411 Ga0501046_0024537
412 Ga0501067_0075478
413 Ga0501072_0014314
414 Ga0501076_0043105
415 Ga0501077_0012120
416 Ga0501077_0019831
417 Ga0501077_0040780
418 Ga0501247_000645
419 Ga0501079_0001685
420 Ga0501079_0022496
421 Ga0501081_0003218
422 Ga0501268_000153
423 Ga0501272_001287
424 Ga0501274_002935
425 Ga0501045_0022179
426 nmdc:mga05p37_117943_c1
427 nmdc:mga05p37_158188_c1
428 nmdc:mga05p37_99991_c1
429 nmdc:mga09592_1330_c1
430 nmdc:mga09592_3392_c1
431 nmdc:mga09592_61237_c1
432 nmdc:mga06r32_199731_c1
433 nmdc:mga06r32_23213_c1
434 nmdc:mga06r32_29280_c1
435 nmdc:mga06r32_39210_c1
436 nmdc:mga0n895_101666_c1
437 nmdc:mga0n895_165477_c1
438 nmdc:mga0n895_21069_c1
439 nmdc:mga0n895_238412_c1
440 nmdc:mga0n895_4352_c1
441 nmdc:mga0n895_6682_c1
442 nmdc:mga0n895_8046_c1
443 nmdc:mga0rr50_101384_c1
444 nmdc:mga0rr50_17444_c2
445 nmdc:mga0rr50_182012_c1
446 nmdc:mga0rr50_25993_c1
447 nmdc:mga0rr50_69794_c1
448 nmdc:mga08x19_11207_c1
449 nmdc:mga08x19_13590_c1
450 nmdc:mga08x19_3421_c1
451 nmdc:mga08x19_55120_c1
452 nmdc:mga08x19_953_c1
453 nmdc:mga0a205_108867_c1
454 nmdc:mga0a205_11706_c1
455 nmdc:mga0a205_21501_c1
456 nmdc:mga0a205_4669_c1
457 nmdc:mga0a205_56447_c1
458 nmdc:mga0a205_9648_c1
459 Ga0501084_0067026
460 Ga0501084_0157539
461 Ga0501082_0032076
462 Ga0530510_0131160

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09334

tRNA-synt_1g

tRNA synthetases class I (M)

4

121

0.97

PF09334

tRNA-synt_1g

tRNA synthetases class I (M)

116

342

0.89

PF19303

Anticodon_3

Anticodon binding domain of methionyl tRNA ligase

353

486

0.85

PF00133

tRNA-synt_1

tRNA synthetases class I (I, L, M and V)

1

96

0.84

PF00133

tRNA-synt_1

tRNA synthetases class I (I, L, M and V)

201

317

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
4dlp-assembly3.cif.gz_C crystal structure of methionyl-trna synthetase metrs from brucella melitensis bound to selenomethionine 0.947 4 510
4dlp-assembly2.cif.gz_B crystal structure of methionyl-trna synthetase metrs from brucella melitensis bound to selenomethionine 0.9464 3 510
4py2-assembly2.cif.gz_B crystal structure of methionyl-trna synthetase metrs from brucella melitensis in complex with inhibitor 1-{3-[(3,5-dichlorobenzyl)amino]propyl}-3-thiophen-3-ylurea 0.9405 4 510
4dlp-assembly3.cif.gz_C crystal structure of methionyl-trna synthetase metrs from brucella melitensis bound to selenomethionine 0.9392 4 510
4dlp-assembly2.cif.gz_B crystal structure of methionyl-trna synthetase metrs from brucella melitensis bound to selenomethionine 0.9385 3 510
ID Description Score Start End Superfamily
2ct8B02 Mainly Beta;Beta Complex;Methionyl-trna Synthetase; domain 2; 0.9399 160 227 2.170.220.10
2csxB02 Mainly Beta;Beta Complex;Methionyl-trna Synthetase; domain 2; 0.9318 160 227 2.170.220.10
2ct8B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9255 1 336 3.40.50.620
2ct8B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9176 1 336 3.40.50.620
2x1lB02 Mainly Beta;Beta Complex;Methionyl-trna Synthetase; domain 2; 0.9136 160 227 2.170.220.10
ID Description Score Start End GO Terms
AF-A0A2V7KTH3-F1-model_v4 Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) 0.9767 1 515 GO:0004825
GO:0005524
GO:0006431
AF-A0A0G1FJC4-F1-model_v4 Methionyl-tRNA synthetase 0.9731 3 114 GO:0004825
GO:0005524
GO:0006431
AF-A0A521SYX6-F1-model_v4 Methionine--tRNA ligase 0.9686 5 211 GO:0004825
GO:0005524
GO:0006431
AF-A0A7J4J822-F1-model_v4 Methionyl-tRNA synthetase 0.9654 5 115 GO:0004825
GO:0005524
GO:0005829
GO:0006431
GO:0017101
AF-A0A7J2TY45-F1-model_v4 Methionine--tRNA ligase 0.9652 1 101 GO:0004825
GO:0005524
GO:0006431

Map