F343869

General Info

Members Datasets Scaffolds Average Seq Length
231 150 230 658

Family's Representative Sequence

Representative Sequence 3300005618|Ga0068864_100059390|Ga0068864_1000593902
Length 776
Sequence MDEMGKIEDAVSAGTLLESSATNIRRVLESAPSPVVSQSIAELVEAGEWTELNDRFFRSLAFGTGGIRGRTIGRIVTAAERGTPNELGRPEFPCVGTNAMNFDSVSRATQGLVDYLRTWFVREKLSGRPKLVIAHDTRFFSTDFTKLAAEIAAKNGCDAFIFDGPRSTPELSFAVRYLRASAGVVITASHNPSHDNGYKVYFSDGAQVIEPHASGIIARVNAAGGPPPGEVRGEIVTLGREVDRAYMARLETLVLDPALVRAQRDLRIVYTPIHGTGAVIIKPMLEQLGFSFDVVAEQDRFDGRFPTVESPNPENAEALKLGIELAKKKNADLLIATDPDCDRMGVAVKSANGEMKLLTGNQIGSLLAYYRAKTLFEQGVLNSENAFRGVLIKTFVTTDLQKAIAEKFGLRCVETLTGFKYIGAKLEKYERAVPLPEGKNYRDLPEEETRRLRLAHSSFYIFGGEESYGYSGADFVRDKDANGAAIMFCEVAAYAKSRGLTIDGLLDQVYAQFGYYLEKNGALTFEGAEGATKIQRLLATYVSNPPNEMLGSKVIAVQNFETDTIRDVEGDEIPREKMLIFKLADKTRVTVRGSGTEPKIKYYLFAQRCPDRSEFTREELVAIKPRVGARLDALWAWLQEDAASRISSTSRSLRVANFPAAARHPAVHGHNSSVSEIKLSGGEITILKTLGLTGAQMAGTQLVDRIAEMEGAEFLDTLTGLIDQDYVVANRVNIRTMDSVKAAAFRVNAAVSRELRDAVYPSRQGKPDTGRRRRRA

Samples

Sample ID Description Type Environment
1 2786546548 Spartobacteria bacterium LR76 Isolate Unclassified
2 3300001977 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
6 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
13 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
14 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
15 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
16 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
17 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
18 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
19 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
24 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
25 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
26 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
27 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
28 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
29 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
30 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
31 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
32 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
33 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
34 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
35 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
36 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
37 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
38 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
39 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
40 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
41 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
45 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
46 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
47 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
48 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
49 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
50 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
51 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
52 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
54 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
56 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
58 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
59 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
60 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
61 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
62 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
63 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
64 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
67 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
68 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
69 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
70 3300025290 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (version 2) Metagenome Rhizosphere
71 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
103 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
104 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
105 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
106 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
107 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
108 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
109 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
110 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
111 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
112 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
113 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
114 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
115 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
116 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
117 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
118 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
119 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
120 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
121 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
122 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
123 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
124 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
125 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
126 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
127 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
128 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
129 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
130 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
131 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
132 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
133 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
134 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
135 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
136 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
137 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
138 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
139 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
140 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
143 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
144 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
145 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
146 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
147 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
148 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
149 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
150 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.57
Metatranscriptomes 0
Isolates 0.43

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.33
Nodule 0
Rhizoplane 6.06
Rhizosphere 85.71
Stem 0
Stem Tuber 0
Unclassified 3.9

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24746J21847_1000926 3300001977 Bacteria 4589
2 JGI25406J46586_10000033 3300003203 Bacteria 65430
3 Ga0065704_10101864 3300005289 Bacteria 2223
4 Ga0065712_10004909 3300005290 Unclassified 3942
5 Ga0065712_10006654 3300005290 Bacteria 8127
6 Ga0065712_10016522 3300005290 Bacteria 4392
7 Ga0065712_10075987 3300005290 Bacteria 3711
8 Ga0065712_10092413 3300005290 Bacteria 2330
9 Ga0065715_10009615 3300005293 Bacteria 4149
10 Ga0065715_10092838 3300005293 Bacteria 4881
11 Ga0065715_10093798 3300005293 Unclassified 4512
12 Ga0070658_10005042 3300005327 Bacteria 10751
13 Ga0070676_10008674 3300005328 Bacteria 5485
14 Ga0070683_100011242 3300005329 Bacteria 7725
15 Ga0070690_100060918 3300005330 Bacteria 2430
16 Ga0070666_10014548 3300005335 Bacteria 5013
17 Ga0070666_10036029 3300005335 Bacteria 3282
18 Ga0070680_100045273 3300005336 Bacteria 3577
19 Ga0070660_100010253 3300005339 Bacteria 6613
20 Ga0070689_100001449 3300005340 Bacteria 15138
21 Ga0070689_100027807 3300005340 Unclassified 4267
22 Ga0070687_100000890 3300005343 Bacteria 10061
23 Ga0070661_100016932 3300005344 Bacteria 5162
24 Ga0070661_100018381 3300005344 Bacteria 4969
25 Ga0070668_100033015 3300005347 Unclassified 3940
26 Ga0070675_100004953 3300005354 Bacteria 10159
27 Ga0070675_100052587 3300005354 Unclassified 3349
28 Ga0070675_100070142 3300005354 Unclassified 2904
29 Ga0070671_100030447 3300005355 Unclassified 4453
30 Ga0070671_100049216 3300005355 Bacteria 3507
31 Ga0070673_100009511 3300005364 Bacteria 6527
32 Ga0070673_100027480 3300005364 Unclassified 4219
33 Ga0070659_100002346 3300005366 Bacteria 13453
34 Ga0070667_100061668 3300005367 Unclassified 3175
35 Ga0070709_10004166 3300005434 Bacteria 7793
36 Ga0070713_100020125 3300005436 Bacteria 5110
37 Ga0070711_100020643 3300005439 Bacteria 4249
38 Ga0070711_100022132 3300005439 Bacteria 4116
39 Ga0070663_100039275 3300005455 Bacteria 3306
40 Ga0070681_10016514 3300005458 Bacteria 7372
41 Ga0068867_100000025 3300005459 Bacteria 92038
42 Ga0070706_100010623 3300005467 Bacteria 8546
43 Ga0070706_100039389 3300005467 Bacteria 4363
44 Ga0070707_100000410 3300005468 Bacteria 42459
45 Ga0070698_100001185 3300005471 Bacteria 28899
46 Ga0070679_100013899 3300005530 Bacteria 7713
47 Ga0070684_100001239 3300005535 Bacteria 18328
48 Ga0070684_100008476 3300005535 Bacteria 8041
49 Ga0070697_100002984 3300005536 Bacteria 12996
50 Ga0070697_100017376 3300005536 Bacteria 5659
51 Ga0070697_100049366 3300005536 Unclassified 3416
52 Ga0070672_100025642 3300005543 Bacteria 4376
53 Ga0070672_100031125 3300005543 Unclassified 4014
54 Ga0070665_100048851 3300005548 Unclassified 4247
55 Ga0070665_100104444 3300005548 Bacteria 2835
56 Ga0070704_100047569 3300005549 Unclassified 2999
57 Ga0070664_100002593 3300005564 Bacteria 14581
58 Ga0068856_100021594 3300005614 Bacteria 6256
59 Ga0068859_100020667 3300005617 Bacteria 6607
60 Ga0068864_100059390 3300005618 Unclassified 3309
61 Ga0068864_100101965 3300005618 Unclassified 2546
62 Ga0068863_100020115 3300005841 Archaea 6385
63 Ga0068860_100008838 3300005843 Bacteria 10034
64 Ga0081455_10012938 3300005937 Bacteria 8277
65 Ga0081455_10016629 3300005937 Bacteria 7092
66 Ga0081540_1000215 3300005983 Bacteria 61058
67 Ga0081539_10000138 3300005985 Bacteria 170633
68 Ga0081539_10005958 3300005985 Bacteria 12017
69 Ga0081539_10028858 3300005985 Bacteria 3482
70 Ga0070717_10020215 3300006028 Bacteria 5232
71 Ga0070717_10127438 3300006028 Unclassified 2186
72 Ga0070717_10139230 3300006028 Bacteria 2092
73 Ga0070715_10015987 3300006163 Bacteria 2809
74 Ga0070716_100024168 3300006173 Bacteria 3231
75 Ga0070712_100029866 3300006175 Bacteria 3657
76 Ga0075362_10000082 3300006177 Bacteria 26254
77 Ga0097621_100074292 3300006237 Unclassified 2816
78 Ga0075436_100015408 3300006914 Bacteria 5236
79 Ga0097620_100020667 3300006931 Bacteria 6607
80 Ga0105245_10034510 3300009098 Bacteria 4488
81 Ga0114129_10013134 3300009147 Bacteria 11798
82 Ga0114129_10061965 3300009147 Bacteria 5226
83 Ga0114129_10101181 3300009147 Bacteria 3988
84 Ga0105243_10000034 3300009148 Bacteria 179299
85 Ga0105249_10010505 3300009553 Bacteria 8135
86 Ga0105239_10094450 3300010375 Unclassified 3303
87 Ga0157373_10000644 3300013100 Bacteria 27424
88 Ga0157370_10008253 3300013104 Bacteria 11241
89 Ga0157374_10000071 3300013296 Bacteria 102927
90 Ga0157374_10030427 3300013296 Bacteria 4902
91 Ga0157374_10061045 3300013296 Bacteria 3529
92 Ga0157374_10079787 3300013296 Unclassified 3102
93 Ga0157372_10081103 3300013307 Unclassified 3672
94 Ga0157375_10000805 3300013308 Bacteria 27544
95 Ga0157375_10003475 3300013308 Bacteria 13658
96 Ga0157375_10010312 3300013308 Bacteria 8224
97 Ga0157375_10092112 3300013308 Unclassified 3094
98 Ga0157379_10013053 3300014968 Bacteria 7274
99 Ga0157376_10003929 3300014969 Bacteria 10276
100 Ga0157376_10017323 3300014969 Bacteria 5491
101 Ga0157376_10085100 3300014969 Unclassified 2724
102 Ga0182006_1010992 3300015261 Unclassified 3998
103 Ga0213872_10001114 3300021361 Bacteria 18378
104 Ga0213876_10002025 3300021384 Bacteria 12067
105 Ga0213876_10008413 3300021384 Bacteria 5583
106 Ga0213876_10015294 3300021384 Bacteria 4063
107 Ga0207673_1001322 3300025290 Unclassified 2686
108 Ga0207697_10000010 3300025315 Bacteria 65144
109 Ga0207697_10000183 3300025315 Bacteria 32539
110 Ga0207697_10000202 3300025315 Bacteria 31881
111 Ga0207697_10001481 3300025315 Bacteria 12816
112 Ga0207697_10001546 3300025315 Bacteria 12459
113 Ga0207697_10002217 3300025315 Bacteria 10154
114 Ga0207697_10007105 3300025315 Bacteria 5011
115 Ga0207697_10014781 3300025315 Unclassified 3233
116 Ga0207680_10016214 3300025903 Unclassified 3907
117 Ga0207699_10010544 3300025906 Bacteria 4642
118 Ga0207645_10012387 3300025907 Bacteria 5785
119 Ga0207645_10023872 3300025907 Bacteria 3969
120 Ga0207705_10004989 3300025909 Bacteria 9957
121 Ga0207684_10013694 3300025910 Bacteria 7007
122 Ga0207684_10103962 3300025910 Bacteria 2428
123 Ga0207693_10011717 3300025915 Bacteria 7092
124 Ga0207693_10022129 3300025915 Bacteria 5054
125 Ga0207660_10042864 3300025917 Unclassified 3179
126 Ga0207662_10003951 3300025918 Bacteria 7725
127 Ga0207657_10027562 3300025919 Bacteria 5202
128 Ga0207649_10003763 3300025920 Bacteria 8276
129 Ga0207646_10001029 3300025922 Bacteria 35628
130 Ga0207646_10017766 3300025922 Bacteria 6645
131 Ga0207681_10014466 3300025923 Unclassified 4904
132 Ga0207659_10008947 3300025926 Bacteria 6242
133 Ga0207659_10009344 3300025926 Bacteria 6122
134 Ga0207659_10011601 3300025926 Bacteria 5573
135 Ga0207659_10043135 3300025926 Bacteria 3166
136 Ga0207659_10103047 3300025926 Unclassified 2155
137 Ga0207664_10051247 3300025929 Bacteria 3258
138 Ga0207644_10007341 3300025931 Bacteria 7177
139 Ga0207690_10002373 3300025932 Bacteria 11413
140 Ga0207706_10001380 3300025933 Bacteria 24276
141 Ga0207706_10083258 3300025933 Unclassified 2812
142 Ga0207706_10103191 3300025933 Bacteria 2508
143 Ga0207709_10000099 3300025935 Bacteria 135428
144 Ga0207665_10024022 3300025939 Unclassified 4017
145 Ga0207665_10038592 3300025939 Bacteria 3181
146 Ga0207691_10000756 3300025940 Bacteria 31938
147 Ga0207691_10005880 3300025940 Bacteria 11848
148 Ga0207661_10074102 3300025944 Bacteria 2790
149 Ga0207679_10007611 3300025945 Bacteria 6879
150 Ga0207679_10083197 3300025945 Unclassified 2452
151 Ga0207712_10003271 3300025961 Archaea 10281
152 Ga0207678_10002001 3300026067 Bacteria 18558
153 Ga0207708_10041345 3300026075 Unclassified 3515
154 Ga0207641_10023831 3300026088 Archaea 5044
155 Ga0207648_10000134 3300026089 Bacteria 73554
156 Ga0207683_10008979 3300026121 Bacteria 8515
157 Ga0207683_10036333 3300026121 Bacteria 4289
158 Ga0268266_10021771 3300028379 Bacteria 5462
159 Ga0268266_10043914 3300028379 Unclassified 3820
160 Ga0268264_10006738 3300028381 Bacteria 9651
161 Ga0307408_100001468 3300031548 Bacteria 17486
162 Ga0307408_100054237 3300031548 Bacteria 2898
163 Ga0307406_10000276 3300031901 Bacteria 30647
164 Ga0307409_100004065 3300031995 Bacteria 8133
165 Ga0307414_10000003 3300032004 Bacteria 519751
166 Ga0307411_10012790 3300032005 Bacteria 4598
167 Ga0373946_0014154 3300035171 Unclassified 3006
168 Ga0373935_0011250 3300035692 Bacteria 5374
169 Ga0373935_0062314 3300035692 Bacteria 2389
170 Ga0373947_0012234 3300035725 Bacteria 4915
171 Ga0373947_0027285 3300035725 Unclassified 3342
172 Ga0373925_0109005 3300037068 Unclassified 2137
173 Ga0395899_0028454 3300037312 Bacteria 4208
174 Ga0395898_0066182 3300037466 Bacteria 3502
175 Ga0395901_0001162 3300038443 Bacteria 27968
176 Ga0436365_0099926 3300039437 Bacteria 10247
177 Ga0436365_0691418 3300039437 Bacteria 39219
178 Ga0436365_1225211 3300039437 Bacteria 28469
179 Ga0436360_0394565 3300039438 Bacteria 2654
180 Ga0436360_0599989 3300039438 Bacteria 7523
181 Ga0436361_0247335 3300039447 Bacteria 6469
182 Ga0436361_0968681 3300039447 Unclassified 4068
183 Ga0436361_1223655 3300039447 Bacteria 5084
184 Ga0436363_1128194 3300039450 Bacteria 4384
185 Ga0436362_0984703 3300039453 Bacteria 4087
186 Ga0436362_1177404 3300039453 Bacteria 3079
187 Ga0450893_0000126 3300042532 Bacteria 9206
188 Ga0495592_0009357 3300046454 Bacteria 7368
189 Ga0495651_0003216 3300046462 Bacteria 12552
190 Ga0495628_0017940 3300046516 Bacteria 5874
191 Ga0495628_0060923 3300046516 Bacteria 2960
192 Ga0495652_0016998 3300046529 Bacteria 6499
193 Ga0495587_0019020 3300046536 Bacteria 4256
194 Ga0495645_0019928 3300046543 Bacteria 4835
195 Ga0495645_0033974 3300046543 Bacteria 3721
196 Ga0495599_0015871 3300046678 Bacteria 4675
197 Ga0495675_0015763 3300047444 Bacteria 4779
198 Ga0495675_0024285 3300047444 Bacteria 3864
199 Ga0495684_0024687 3300047471 Bacteria 4625
200 Ga0495602_0037933 3300048088 Bacteria 4462
201 Ga0496100_0094861 3300048903 Unclassified 2044
202 Ga0496102_0045950 3300048905 Bacteria 3965
203 Ga0496102_0113010 3300048905 Unclassified 2533
204 Ga0496103_0038430 3300048906 Bacteria 2937
205 Ga0496104_0026909 3300048907 Bacteria 5317
206 Ga0496104_0098245 3300048907 Unclassified 2803
207 Ga0496104_0160195 3300048907 Bacteria 2159
208 Ga0496107_0028353 3300048910 Unclassified 3978
209 Ga0496108_0012817 3300048911 Bacteria 6828
210 Ga0496109_0053172 3300048912 Unclassified 3693
211 Ga0496114_0014381 3300048917 Bacteria 6351
212 Ga0496115_0018071 3300048918 Bacteria 5404
213 Ga0496115_0023142 3300048918 Unclassified 4820
214 Ga0496115_0024231 3300048918 Bacteria 4714
215 Ga0496125_0008203 3300048928 Bacteria 10986
216 Ga0501032_0017204 3300049569 Bacteria 5078
217 Ga0501039_0078156 3300049575 Bacteria 2574
218 Ga0501227_000385 3300049665 Bacteria 9326
219 nmdc:mga03683_4124_c1 3300050489 Unclassified 4778
220 nmdc:mga0k408_12924_c1 3300050493 Unclassified 4573
221 nmdc:mga0k408_2703_c1 3300050493 Bacteria 9413
222 nmdc:mga05p37_144160_c1 3300050507 Bacteria 2917
223 nmdc:mga05p37_43824_c1 3300050507 Bacteria 5505
224 nmdc:mga05p37_69329_c1 3300050507 Bacteria 4337
225 Ga0500555_001414 3300053103 Bacteria 7393
226 Ga0500556_0000078 3300053104 Bacteria 92789
227 Ga0500556_0008008 3300053104 Bacteria 3039
228 Ga0500559_0004504 3300053136 Bacteria 6596
229 Ga0500568_0007660 3300053139 Bacteria 5275
230 Ga0500616_0010882 3300053153 Bacteria 5418

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005439 Ga0070711_100022132 Ga0070711_1000221322 616
2 3300046462 Ga0495651_0003216 Ga0495651_0003216_3331_5283 616
3 3300046516 Ga0495628_0017940 Ga0495628_0017940_1208_3160 616
4 3300046543 Ga0495645_0033974 Ga0495645_0033974_1398_3350 616
5 3300047444 Ga0495675_0024285 Ga0495675_0024285_103_2055 616
6 3300013296 Ga0157374_10000071 Ga0157374_1000007182 617
7 3300039447 Ga0436361_1223655 Ga0436361_1223655_42_1988 617
8 3300025929 Ga0207664_10051247 Ga0207664_100512472 622
9 3300005985 Ga0081539_10005958 Ga0081539_100059586 624
10 3300053139 Ga0500568_0007660 Ga0500568_0007660_295_2250 624
11 3300021361 Ga0213872_10001114 Ga0213872_1000111415 628
12 3300025939 Ga0207665_10024022 Ga0207665_100240223 628
13 3300005290 Ga0065712_10004909 Ga0065712_100049093 630
14 3300005293 Ga0065715_10093798 Ga0065715_100937982 630
15 3300005330 Ga0070690_100060918 Ga0070690_1000609181 630
16 3300005335 Ga0070666_10036029 Ga0070666_100360292 630
17 3300005455 Ga0070663_100039275 Ga0070663_1000392752 630
18 3300005548 Ga0070665_100104444 Ga0070665_1001044442 630
19 3300013308 Ga0157375_10010312 Ga0157375_100103125 630
20 3300014969 Ga0157376_10085100 Ga0157376_100851002 630
21 3300015261 Ga0182006_1010992 Ga0182006_10109922 630
22 3300025315 Ga0207697_10000010 Ga0207697_1000001020 630
23 3300025907 Ga0207645_10023872 Ga0207645_100238724 630
24 3300026067 Ga0207678_10002001 Ga0207678_1000200112 630
25 3300048911 Ga0496108_0012817 Ga0496108_0012817_3181_5154 630
26 3300048912 Ga0496109_0053172 Ga0496109_0053172_1293_3266 630
27 3300005354 Ga0070675_100052587 Ga0070675_1000525873 631
28 3300005354 Ga0070675_100070142 Ga0070675_1000701422 631
29 3300005364 Ga0070673_100027480 Ga0070673_1000274804 631
30 3300005367 Ga0070667_100061668 Ga0070667_1000616683 631
31 3300005548 Ga0070665_100048851 Ga0070665_1000488513 631
32 3300005618 Ga0068864_100059390 Ga0068864_1000593902 631
33 3300006237 Ga0097621_100074292 Ga0097621_1000742922 631
34 3300013296 Ga0157374_10079787 Ga0157374_100797872 631
35 3300013308 Ga0157375_10092112 Ga0157375_100921123 631
36 3300025315 Ga0207697_10014781 Ga0207697_100147813 631
37 3300025907 Ga0207645_10012387 Ga0207645_100123873 631
38 3300025926 Ga0207659_10011601 Ga0207659_100116014 631
39 3300025940 Ga0207691_10000756 Ga0207691_1000075626 631
40 3300025945 Ga0207679_10083197 Ga0207679_100831972 631
41 3300028379 Ga0268266_10021771 Ga0268266_100217714 631
42 3300048907 Ga0496104_0160195 Ga0496104_0160195_139_2082 631
43 3300048918 Ga0496115_0024231 Ga0496115_0024231_35_1978 631
44 3300005290 Ga0065712_10006654 Ga0065712_100066544 633
45 3300005293 Ga0065715_10092838 Ga0065715_100928384 633
46 3300005329 Ga0070683_100011242 Ga0070683_1000112424 633
47 3300005530 Ga0070679_100013899 Ga0070679_1000138992 633
48 3300025315 Ga0207697_10001481 Ga0207697_100014816 633
49 3300025926 Ga0207659_10103047 Ga0207659_101030471 633
50 3300048903 Ga0496100_0094861 Ga0496100_0094861_23_2017 633
51 3300009147 Ga0114129_10061965 Ga0114129_100619652 634
52 3300050507 nmdc:mga05p37_69329_c1 nmdc:mga05p37_69329_c1_351_2321 634
53 3300005327 Ga0070658_10005042 Ga0070658_1000504212 635
54 3300005937 Ga0081455_10016629 Ga0081455_100166292 635
55 3300013104 Ga0157370_10008253 Ga0157370_100082537 635
56 3300025909 Ga0207705_10004989 Ga0207705_100049896 635
57 3300025933 Ga0207706_10083258 Ga0207706_100832581 635
58 iso_pu_bacteria 2786546548 2787508426 635
59 3300005468 Ga0070707_100000410 Ga0070707_10000041033 636
60 3300006914 Ga0075436_100015408 Ga0075436_1000154082 636
61 3300025922 Ga0207646_10001029 Ga0207646_1000102926 636
62 3300025922 Ga0207646_10017766 Ga0207646_100177665 636
63 3300025923 Ga0207681_10014466 Ga0207681_100144661 636
64 3300025940 Ga0207691_10005880 Ga0207691_100058803 636
65 3300026121 Ga0207683_10008979 Ga0207683_100089793 636
66 3300005467 Ga0070706_100010623 Ga0070706_1000106238 637
67 3300006177 Ga0075362_10000082 Ga0075362_1000008224 638
68 3300025944 Ga0207661_10074102 Ga0207661_100741022 638
69 3300039450 Ga0436363_1128194 Ga0436363_1128194_150_2096 638
70 3300050489 nmdc:mga03683_4124_c1 nmdc:mga03683_4124_c1_1259_3199 638
71 3300050493 nmdc:mga0k408_12924_c1 nmdc:mga0k408_12924_c1_768_2708 638
72 3300050493 nmdc:mga0k408_2703_c1 nmdc:mga0k408_2703_c1_6813_8753 638
73 3300053103 Ga0500555_001414 Ga0500555_001414_3222_5162 638
74 3300053104 Ga0500556_0000078 Ga0500556_0000078_78873_80813 638
75 3300053153 Ga0500616_0010882 Ga0500616_0010882_2603_4558 638
76 3300005471 Ga0070698_100001185 Ga0070698_10000118517 639
77 3300005536 Ga0070697_100002984 Ga0070697_1000029849 639
78 3300006028 Ga0070717_10139230 Ga0070717_101392301 639
79 3300021384 Ga0213876_10008413 Ga0213876_100084134 639
80 3300021384 Ga0213876_10015294 Ga0213876_100152944 639
81 3300025315 Ga0207697_10000183 Ga0207697_1000018316 639
82 3300025906 Ga0207699_10010544 Ga0207699_100105441 639
83 3300039437 Ga0436365_0099926 Ga0436365_0099926_2124_4127 639
84 3300039437 Ga0436365_0691418 Ga0436365_0691418_30038_31984 639
85 3300039438 Ga0436360_0394565 Ga0436360_0394565_493_2454 639
86 3300039438 Ga0436360_0599989 Ga0436360_0599989_4063_6009 639
87 3300039447 Ga0436361_0247335 Ga0436361_0247335_4376_6322 639
88 3300039453 Ga0436362_1177404 Ga0436362_1177404_891_2852 639
89 3300048928 Ga0496125_0008203 Ga0496125_0008203_1997_3958 639
90 3300053104 Ga0500556_0008008 Ga0500556_0008008_579_2537 639
91 3300005543 Ga0070672_100031125 Ga0070672_1000311253 640
92 3300006028 Ga0070717_10127438 Ga0070717_101274382 640
93 3300025926 Ga0207659_10043135 Ga0207659_100431351 640
94 3300025933 Ga0207706_10103191 Ga0207706_101031911 640
95 3300032005 Ga0307411_10012790 Ga0307411_100127903 640
96 3300042532 Ga0450893_0000126 Ga0450893_0000126_3102_5027 640
97 3300048910 Ga0496107_0028353 Ga0496107_0028353_806_2800 640
98 3300048918 Ga0496115_0023142 Ga0496115_0023142_45_2012 640
99 3300005983 Ga0081540_1000215 Ga0081540_10002159 641
100 3300021384 Ga0213876_10002025 Ga0213876_100020253 641
101 3300039437 Ga0436365_1225211 Ga0436365_1225211_20966_22936 641
102 3300005937 Ga0081455_10012938 Ga0081455_100129382 642
103 3300009147 Ga0114129_10013134 Ga0114129_100131343 642
104 3300050507 nmdc:mga05p37_43824_c1 nmdc:mga05p37_43824_c1_175_2142 642
105 3300003203 JGI25406J46586_10000033 JGI25406J46586_100000339 643
106 3300005290 Ga0065712_10016522 Ga0065712_100165222 643
107 3300005290 Ga0065712_10075987 Ga0065712_100759872 643
108 3300005290 Ga0065712_10092413 Ga0065712_100924131 643
109 3300005293 Ga0065715_10009615 Ga0065715_100096153 643
110 3300005328 Ga0070676_10008674 Ga0070676_100086743 643
111 3300005335 Ga0070666_10014548 Ga0070666_100145483 643
112 3300005336 Ga0070680_100045273 Ga0070680_1000452731 643
113 3300005339 Ga0070660_100010253 Ga0070660_1000102534 643
114 3300005340 Ga0070689_100001449 Ga0070689_1000014498 643
115 3300005340 Ga0070689_100027807 Ga0070689_1000278074 643
116 3300005343 Ga0070687_100000890 Ga0070687_1000008906 643
117 3300005344 Ga0070661_100018381 Ga0070661_1000183815 643
118 3300005347 Ga0070668_100033015 Ga0070668_1000330152 643
119 3300005354 Ga0070675_100004953 Ga0070675_1000049533 643
120 3300005355 Ga0070671_100030447 Ga0070671_1000304472 643
121 3300005355 Ga0070671_100049216 Ga0070671_1000492161 643
122 3300005364 Ga0070673_100009511 Ga0070673_1000095112 643
123 3300005366 Ga0070659_100002346 Ga0070659_1000023466 643
124 3300005434 Ga0070709_10004166 Ga0070709_100041662 643
125 3300005436 Ga0070713_100020125 Ga0070713_1000201253 643
126 3300005439 Ga0070711_100020643 Ga0070711_1000206434 643
127 3300005458 Ga0070681_10016514 Ga0070681_100165144 643
128 3300005467 Ga0070706_100039389 Ga0070706_1000393891 643
129 3300005535 Ga0070684_100001239 Ga0070684_1000012396 643
130 3300005535 Ga0070684_100008476 Ga0070684_1000084763 643
131 3300005536 Ga0070697_100017376 Ga0070697_1000173765 643
132 3300005536 Ga0070697_100049366 Ga0070697_1000493663 643
133 3300005543 Ga0070672_100025642 Ga0070672_1000256422 643
134 3300005549 Ga0070704_100047569 Ga0070704_1000475692 643
135 3300005614 Ga0068856_100021594 Ga0068856_1000215943 643
136 3300005617 Ga0068859_100020667 Ga0068859_1000206672 643
137 3300005618 Ga0068864_100101965 Ga0068864_1001019651 643
138 3300005841 Ga0068863_100020115 Ga0068863_1000201154 643
139 3300005843 Ga0068860_100008838 Ga0068860_1000088383 643
140 3300005985 Ga0081539_10000138 Ga0081539_1000013873 643
141 3300005985 Ga0081539_10028858 Ga0081539_100288582 643
142 3300006028 Ga0070717_10020215 Ga0070717_100202152 643
143 3300006163 Ga0070715_10015987 Ga0070715_100159872 643
144 3300006173 Ga0070716_100024168 Ga0070716_1000241682 643
145 3300006175 Ga0070712_100029866 Ga0070712_1000298662 643
146 3300006931 Ga0097620_100020667 Ga0097620_1000206676 643
147 3300009098 Ga0105245_10034510 Ga0105245_100345103 643
148 3300009147 Ga0114129_10101181 Ga0114129_101011811 643
149 3300009553 Ga0105249_10010505 Ga0105249_100105056 643
150 3300010375 Ga0105239_10094450 Ga0105239_100944502 643
151 3300013296 Ga0157374_10030427 Ga0157374_100304273 643
152 3300013296 Ga0157374_10061045 Ga0157374_100610453 643
153 3300013307 Ga0157372_10081103 Ga0157372_100811032 643
154 3300013308 Ga0157375_10000805 Ga0157375_100008053 643
155 3300013308 Ga0157375_10003475 Ga0157375_1000347511 643
156 3300014968 Ga0157379_10013053 Ga0157379_100130536 643
157 3300014969 Ga0157376_10003929 Ga0157376_100039294 643
158 3300025290 Ga0207673_1001322 Ga0207673_10013222 643
159 3300025315 Ga0207697_10000202 Ga0207697_1000020222 643
160 3300025315 Ga0207697_10001546 Ga0207697_100015469 643
161 3300025315 Ga0207697_10002217 Ga0207697_100022174 643
162 3300025315 Ga0207697_10007105 Ga0207697_100071053 643
163 3300025903 Ga0207680_10016214 Ga0207680_100162141 643
164 3300025910 Ga0207684_10013694 Ga0207684_100136944 643
165 3300025910 Ga0207684_10103962 Ga0207684_101039621 643
166 3300025915 Ga0207693_10011717 Ga0207693_100117172 643
167 3300025915 Ga0207693_10022129 Ga0207693_100221292 643
168 3300025917 Ga0207660_10042864 Ga0207660_100428641 643
169 3300025918 Ga0207662_10003951 Ga0207662_100039513 643
170 3300025919 Ga0207657_10027562 Ga0207657_100275623 643
171 3300025926 Ga0207659_10008947 Ga0207659_100089474 643
172 3300025926 Ga0207659_10009344 Ga0207659_100093443 643
173 3300025931 Ga0207644_10007341 Ga0207644_100073413 643
174 3300025932 Ga0207690_10002373 Ga0207690_100023736 643
175 3300025933 Ga0207706_10001380 Ga0207706_1000138013 643
176 3300025939 Ga0207665_10038592 Ga0207665_100385922 643
177 3300025961 Ga0207712_10003271 Ga0207712_100032717 643
178 3300026075 Ga0207708_10041345 Ga0207708_100413452 643
179 3300026088 Ga0207641_10023831 Ga0207641_100238312 643
180 3300026121 Ga0207683_10036333 Ga0207683_100363332 643
181 3300028379 Ga0268266_10043914 Ga0268266_100439143 643
182 3300028381 Ga0268264_10006738 Ga0268264_100067386 643
183 3300035171 Ga0373946_0014154 Ga0373946_0014154_429_2441 643
184 3300035692 Ga0373935_0011250 Ga0373935_0011250_1508_3499 643
185 3300035692 Ga0373935_0062314 Ga0373935_0062314_11_1984 643
186 3300035725 Ga0373947_0012234 Ga0373947_0012234_804_2813 643
187 3300035725 Ga0373947_0027285 Ga0373947_0027285_99_2111 643
188 3300037068 Ga0373925_0109005 Ga0373925_0109005_99_2111 643
189 3300037312 Ga0395899_0028454 Ga0395899_0028454_1109_3103 643
190 3300037466 Ga0395898_0066182 Ga0395898_0066182_1411_3405 643
191 3300038443 Ga0395901_0001162 Ga0395901_0001162_6063_8057 643
192 3300046454 Ga0495592_0009357 Ga0495592_0009357_21_2030 643
193 3300046516 Ga0495628_0060923 Ga0495628_0060923_920_2929 643
194 3300046529 Ga0495652_0016998 Ga0495652_0016998_1204_3213 643
195 3300046536 Ga0495587_0019020 Ga0495587_0019020_2012_4021 643
196 3300046543 Ga0495645_0019928 Ga0495645_0019928_2384_4393 643
197 3300046678 Ga0495599_0015871 Ga0495599_0015871_1747_3756 643
198 3300047444 Ga0495675_0015763 Ga0495675_0015763_611_2620 643
199 3300047471 Ga0495684_0024687 Ga0495684_0024687_477_2486 643
200 3300048088 Ga0495602_0037933 Ga0495602_0037933_206_2215 643
201 3300048905 Ga0496102_0045950 Ga0496102_0045950_431_2413 643
202 3300048905 Ga0496102_0113010 Ga0496102_0113010_381_2420 643
203 3300048906 Ga0496103_0038430 Ga0496103_0038430_194_2176 643
204 3300048907 Ga0496104_0026909 Ga0496104_0026909_1518_3500 643
205 3300048907 Ga0496104_0098245 Ga0496104_0098245_472_2466 643
206 3300048917 Ga0496114_0014381 Ga0496114_0014381_2375_4357 643
207 3300048918 Ga0496115_0018071 Ga0496115_0018071_240_2222 643
208 3300050507 nmdc:mga05p37_144160_c1 nmdc:mga05p37_144160_c1_17_2212 643
209 3300005289 Ga0065704_10101864 Ga0065704_101018641 647
210 3300005344 Ga0070661_100016932 Ga0070661_1000169323 647
211 3300005564 Ga0070664_100002593 Ga0070664_1000025932 647
212 3300025920 Ga0207649_10003763 Ga0207649_100037634 647
213 3300025935 Ga0207709_10000099 Ga0207709_1000009989 647
214 3300025945 Ga0207679_10007611 Ga0207679_100076115 647
215 3300026089 Ga0207648_10000134 Ga0207648_1000013466 647
216 3300013100 Ga0157373_10000644 Ga0157373_1000064424 648
217 3300031548 Ga0307408_100001468 Ga0307408_1000014686 650
218 3300031548 Ga0307408_100054237 Ga0307408_1000542372 650
219 3300031901 Ga0307406_10000276 Ga0307406_1000027615 650
220 3300031995 Ga0307409_100004065 Ga0307409_1000040652 650
221 3300039447 Ga0436361_0968681 Ga0436361_0968681_1160_3289 650
222 3300039453 Ga0436362_0984703 Ga0436362_0984703_404_2533 650
223 3300053136 Ga0500559_0004504 Ga0500559_0004504_1926_3887 650
224 3300001977 JGI24746J21847_1000926 JGI24746J21847_10009265 651
225 3300005459 Ga0068867_100000025 Ga0068867_10000002572 651
226 3300009148 Ga0105243_10000034 Ga0105243_100000345 651
227 3300014969 Ga0157376_10017323 Ga0157376_100173232 651
228 3300032004 Ga0307414_10000003 Ga0307414_10000003138 651
229 3300049569 Ga0501032_0017204 Ga0501032_0017204_28_1983 651
230 3300049575 Ga0501039_0078156 Ga0501039_0078156_315_2285 651
231 3300049665 Ga0501227_000385 Ga0501227_000385_569_2548 651

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02878

PGM_PMM_I

Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I

94

225

0.95

PF02879

PGM_PMM_II

Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II

244

353

0.91

PF02880

PGM_PMM_III

Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III

359

513

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
7olh-assembly3.cif.gz_E bacillus subtilis complex structure 1 of diadenylate cyclase cdaa cytoplasmic domain (cdaacd) and the phosphoglucomutase glmm short variant (glmmf369) 0.8654 74 521
7olh-assembly3.cif.gz_E bacillus subtilis complex structure 1 of diadenylate cyclase cdaa cytoplasmic domain (cdaacd) and the phosphoglucomutase glmm short variant (glmmf369) 0.8523 74 521
1tuo-assembly1.cif.gz_A crystal structure of putative phosphomannomutase from thermus thermophilus hb8 0.8455 70 637
1p5g-assembly1.cif.gz_X enzyme-ligand complex of p. aeruginosa pmm/pgm 0.8383 74 642
1tuo-assembly1.cif.gz_A crystal structure of putative phosphomannomutase from thermus thermophilus hb8 0.8344 70 637
ID Description Score Start End Superfamily
af_O53360_210_293_3.40.120.10 Alpha Beta;3-Layer(aba) Sandwich;Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3;Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.9586 277 359 3.40.120.10
af_Q2FVC1_33_181_3.40.120.10 Alpha Beta;3-Layer(aba) Sandwich;Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3;Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.95 65 235 3.40.120.10
af_O74478_325_454_3.40.120.10 Alpha Beta;3-Layer(aba) Sandwich;Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3;Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.942 369 527 3.40.120.10
af_O53360_210_293_3.40.120.10 Alpha Beta;3-Layer(aba) Sandwich;Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3;Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.9368 277 359 3.40.120.10
af_O74478_325_454_3.40.120.10 Alpha Beta;3-Layer(aba) Sandwich;Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3;Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.935 369 527 3.40.120.10
ID Description Score Start End GO Terms
AF-A0A1Q7UVJ8-F1-model_v4 Phosphomannomutase 0.9754 112 650 GO:0000287
GO:0005975
GO:0006166
GO:0008973
AF-A0A4Q2Y262-F1-model_v4 Phospho-sugar mutase 0.9743 9 554 GO:0000287
GO:0005975
GO:0006166
GO:0008973
AF-A0A2V6JM57-F1-model_v4 Phosphomannomutase 0.9724 13 275 GO:0000287
GO:0005975
GO:0006166
GO:0008973
AF-A0A2V5MM57-F1-model_v4 Phosphomannomutase 0.972 107 471 GO:0000287
GO:0005975
GO:0006166
GO:0008973
AF-A0A4Y9H4Q8-F1-model_v4 deleted 0.972 106 231

Feature Viewer

pLDDT pTM Quality
92.23 0.91 High
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Predicted Structure (AlphaFold2)

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