F343802

General Info

Members Datasets Scaffolds Average Seq Length
231 141 214 275

Family's Representative Sequence

Representative Sequence 3300005445|Ga0070708_100025322|Ga0070708_1000253222
Length 294
Sequence MDERAGPAKRVPVSAVSVSRPRPFVVRKAGAYLLLAVVAILVAFPLLIALSYSLMSESDIVTFPPPLLPAHPSLDNYEKVIATIPIGRYLLNSFVVSGAVVVGHLVTASLAAYAFSFLVFRGRNLLFFVFLSTLMIPWEATIIPNYMTIRSLGWLDTYQGLAVPFMATAFGTFLLRQAFMQIPRELWDAARIDGASSFRFLRAVVIPLSRPALGTVAIYGFLSTYNQYFWPLLITNETLMRTTQVGIAQLRFEESLRWGLVMAGVIMVAVPTLALLVLGQRQLIRGLTAGAVKG

Samples

Sample ID Description Type Environment
1 2511231003 Herbaspirillum sp. CF444 Isolate Rhizosphere
2 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
3 2751185905 Paenibacillus kribbensis 6hRe76 Isolate Unclassified
4 2818991445 Herbaspirillum hiltneri 3195 Isolate Unclassified
5 2828305725 Xanthobacter tagetidis DSM 11105 Isolate Unclassified
6 2839138175 Delftia acidovorans B15 Isolate Rhizosphere
7 2841911363 Bosea caraganae RCAM04685 Isolate Nodule
8 2841917233 Bosea caraganae RCAM04680 Isolate Nodule
9 2884811622 Herbaspirillum sp. 3C11 Isolate Unclassified
10 2884836552 Herbaspirillum sp. 3R-11 Isolate Unclassified
11 2884852848 Herbaspirillum sp. 3R11 Isolate Unclassified
12 2891048133 Martelella lutilitoris GH2-6 Isolate Rhizosphere
13 2894652903 Phyllobacterium sp. SYP-B3895 Isolate Rhizosphere
14 2896154374 Herbaspirillum sp. 3R-3a1 Isolate Nodule
15 2904434214 Robbsia andropogonis 1567 Isolate Rhizosphere
16 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
17 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
18 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
19 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
20 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
21 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
22 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
23 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
24 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
25 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
26 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
27 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
28 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
29 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
30 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
31 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
32 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
33 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
34 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
35 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
36 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
37 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
38 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
39 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
40 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
41 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
42 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
43 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
44 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
45 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
46 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
47 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
48 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
49 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
50 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
51 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
52 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
53 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
54 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
55 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
56 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
57 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
58 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
59 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
60 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
61 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
62 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
63 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
64 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
65 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
66 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
67 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
68 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
69 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
70 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
71 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
72 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
73 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
74 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
75 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
76 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
77 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
78 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
79 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
80 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
82 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
84 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
85 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
86 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
87 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
110 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
111 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
112 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
113 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
114 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
115 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
116 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
117 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
118 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
119 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
120 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
121 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
122 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
123 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
124 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
125 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
126 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
127 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
128 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
129 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
130 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
131 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
132 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
133 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
134 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
135 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
136 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
137 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
138 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
139 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
140 8002392321 Alcaligenes faecalis Mc250 Isolate Rhizosphere
141 8048746797 Alcaligenes endophyticus DSM 100498 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 92.21
Metatranscriptomes 0.43
Isolates 7.36

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.63
Nodule 2.16
Rhizoplane 0
Rhizosphere 79.22
Stem 0
Stem Tuber 0
Unclassified 12.99

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25155J39150_1000076 3300002704 Bacteria 59158
2 JGI25155J39150_1000567 3300002704 Bacteria 8291
3 JGI25156J39149_1000032 3300002705 Bacteria 118609
4 JGI25162J39368_1003517 3300002737 Bacteria 4445
5 JGI25154J39366_1000095 3300002738 Bacteria 79187
6 JGI25154J39366_1000223 3300002738 Bacteria 38684
7 JGI25157J39369_1000388 3300002741 Bacteria 30373
8 rootH1_10071780 3300003323 Archaea 1280
9 Ga0055532_1000083 3300003758 Bacteria 118609
10 Ga0055535_1005872 3300003761 Bacteria 2595
11 Ga0055524_1003123 3300003775 Bacteria 8175
12 Ga0058862_12756416 3300004803 Bacteria 1444
13 Ga0065704_10232316 3300005289 Bacteria 1039
14 Ga0065715_10096904 3300005293 Bacteria 3794
15 Ga0065715_10115857 3300005293 Bacteria 2400
16 Ga0065715_10276931 3300005293 Bacteria 1096
17 Ga0065707_10238528 3300005295 Bacteria 1164
18 Ga0070680_100016816 3300005336 Bacteria 5755
19 Ga0070680_100090616 3300005336 Bacteria 2531
20 Ga0070687_100071655 3300005343 Bacteria 1863
21 Ga0070692_10027106 3300005345 Bacteria 2837
22 Ga0070692_10054479 3300005345 Bacteria 2088
23 Ga0070673_100303680 3300005364 Unclassified 1406
24 Ga0070703_10000667 3300005406 Bacteria 11921
25 Ga0070701_10164788 3300005438 Bacteria 1286
26 Ga0070705_100075782 3300005440 Bacteria 2049
27 Ga0070700_100063894 3300005441 Bacteria 2330
28 Ga0070694_100047948 3300005444 Bacteria 2872
29 Ga0070694_100139851 3300005444 Bacteria 1757
30 Ga0070708_100002487 3300005445 Bacteria 14229
31 Ga0070708_100017346 3300005445 Bacteria 6003
32 Ga0070708_100025322 3300005445 Bacteria 5071
33 Ga0070708_100063834 3300005445 Bacteria 3297
34 Ga0070708_100088664 3300005445 Bacteria 2813
35 Ga0070708_100138615 3300005445 Bacteria 2255
36 Ga0070708_100330830 3300005445 Bacteria 1435
37 Ga0070708_100467135 3300005445 Bacteria 1190
38 Ga0070708_100692476 3300005445 Unclassified 959
39 Ga0070681_10264443 3300005458 Unclassified 1632
40 Ga0068867_100050596 3300005459 Bacteria 3063
41 Ga0070706_100002117 3300005467 Bacteria 20214
42 Ga0070706_100010169 3300005467 Bacteria 8748
43 Ga0070706_100014141 3300005467 Bacteria 7374
44 Ga0070706_100056916 3300005467 Bacteria 3607
45 Ga0070706_100472670 3300005467 Bacteria 1166
46 Ga0070706_100559328 3300005467 Bacteria 1064
47 Ga0070707_100005063 3300005468 Bacteria 12356
48 Ga0070707_100020949 3300005468 Bacteria 6173
49 Ga0070707_100048760 3300005468 Bacteria 4058
50 Ga0070707_100074419 3300005468 Bacteria 3275
51 Ga0070707_100077503 3300005468 Bacteria 3207
52 Ga0070707_100114500 3300005468 Unclassified 2616
53 Ga0070707_100366382 3300005468 Bacteria 1400
54 Ga0070707_100494009 3300005468 Bacteria 1185
55 Ga0070698_100000839 3300005471 Bacteria 33625
56 Ga0070698_100009871 3300005471 Bacteria 10206
57 Ga0070698_100030461 3300005471 Bacteria 5593
58 Ga0070698_100042835 3300005471 Bacteria 4643
59 Ga0070698_100388407 3300005471 Bacteria 1328
60 Ga0070699_100076739 3300005518 Bacteria 2909
61 Ga0070699_100292375 3300005518 Bacteria 1461
62 Ga0070699_100454509 3300005518 Bacteria 1161
63 Ga0070679_100419911 3300005530 Bacteria 1283
64 Ga0070697_100013995 3300005536 Bacteria 6299
65 Ga0070697_100073622 3300005536 Unclassified 2805
66 Ga0070697_100078320 3300005536 Bacteria 2720
67 Ga0070697_100091905 3300005536 Bacteria 2510
68 Ga0070697_100095180 3300005536 Bacteria 2469
69 Ga0070697_100106733 3300005536 Bacteria 2330
70 Ga0070697_100141207 3300005536 Bacteria 2026
71 Ga0070697_100300679 3300005536 Bacteria 1379
72 Ga0070695_100176018 3300005545 Bacteria 1513
73 Ga0070696_100029499 3300005546 Bacteria 3750
74 Ga0070704_100081042 3300005549 Bacteria 2389
75 Ga0068855_100306576 3300005563 Bacteria 1758
76 Ga0070664_100522856 3300005564 Unclassified 1095
77 Ga0068857_100059014 3300005577 Bacteria 3408
78 Ga0068852_100078999 3300005616 Bacteria 2913
79 Ga0068852_100328903 3300005616 Bacteria 1486
80 Ga0068858_100383760 3300005842 Unclassified 1348
81 Ga0081455_10041724 3300005937 Bacteria 4032
82 Ga0081540_1010585 3300005983 Bacteria 6231
83 Ga0081539_10154701 3300005985 Unclassified 1100
84 Ga0075364_10013473 3300006051 Bacteria 5028
85 Ga0075428_100017022 3300006844 Bacteria 8032
86 Ga0075428_100094255 3300006844 Bacteria 3264
87 Ga0075430_100310778 3300006846 Unclassified 1303
88 Ga0075431_100032298 3300006847 Bacteria 5394
89 Ga0075431_100243528 3300006847 Unclassified 1828
90 Ga0075433_10019809 3300006852 Bacteria 5614
91 Ga0075433_10021541 3300006852 Bacteria 5406
92 Ga0075433_10540347 3300006852 Unclassified 1025
93 Ga0075433_10656030 3300006852 Bacteria 920
94 Ga0075434_100084117 3300006871 Bacteria 3180
95 Ga0075434_100121617 3300006871 Bacteria 2626
96 Ga0075434_100168312 3300006871 Bacteria 2211
97 Ga0075434_100433369 3300006871 Bacteria 1336
98 Ga0075434_100537648 3300006871 Unclassified 1189
99 Ga0075429_100016943 3300006880 Bacteria 6304
100 Ga0075429_100239652 3300006880 Bacteria 1589
101 Ga0075436_100012618 3300006914 Bacteria 5788
102 Ga0075436_100022382 3300006914 Bacteria 4341
103 Ga0079104_1000086 3300006946 Bacteria 136260
104 Ga0075435_100014604 3300007076 Bacteria 5877
105 Ga0075435_100486074 3300007076 Bacteria 1067
106 Ga0105240_10007251 3300009093 Bacteria 16141
107 Ga0111539_10189062 3300009094 Bacteria 2403
108 Ga0111539_10202514 3300009094 Bacteria 2314
109 Ga0114129_10000344 3300009147 Bacteria 54235
110 Ga0114129_10008740 3300009147 Bacteria 14444
111 Ga0114129_10073783 3300009147 Bacteria 4753
112 Ga0114129_10094274 3300009147 Bacteria 4146
113 Ga0114129_10706401 3300009147 Bacteria 1295
114 Ga0105243_10024012 3300009148 Bacteria 4646
115 Ga0105243_10307717 3300009148 Archaea 1439
116 Ga0105238_10105699 3300009551 Bacteria 2797
117 Ga0105239_10360125 3300010375 Bacteria 1643
118 Ga0157370_10017928 3300013104 Bacteria 7130
119 Ga0157378_10167209 3300013297 Bacteria 2061
120 Ga0157378_10525468 3300013297 Bacteria 1185
121 Ga0163162_10274964 3300013306 Unclassified 1816
122 Ga0182008_10027894 3300014497 Bacteria 2857
123 Ga0157379_10023137 3300014968 Bacteria 5511
124 Ga0209435_100013 3300025206 Bacteria 366789
125 Ga0209435_100245 3300025206 Bacteria 14440
126 Ga0209147_100030 3300025229 Bacteria 366789
127 Ga0209147_106374 3300025229 Bacteria 1642
128 Ga0209437_100419 3300025233 Bacteria 38515
129 Ga0209258_100433 3300025242 Bacteria 48200
130 Ga0209646_1000021 3300025246 Bacteria 461083
131 Ga0209646_1000034 3300025246 Bacteria 366789
132 Ga0209026_1000022 3300025250 Bacteria 366789
133 Ga0209026_1005831 3300025250 Bacteria 3193
134 Ga0209759_1000018 3300025256 Bacteria 366789
135 Ga0209759_1000100 3300025256 Bacteria 156294
136 Ga0209256_1000128 3300025299 Bacteria 163833
137 Ga0207653_10000214 3300025885 Bacteria 38871
138 Ga0207643_10083632 3300025908 Bacteria 1852
139 Ga0207684_10000024 3300025910 Bacteria 322180
140 Ga0207684_10015800 3300025910 Bacteria 6492
141 Ga0207684_10019451 3300025910 Bacteria 5810
142 Ga0207684_10077235 3300025910 Bacteria 2831
143 Ga0207684_10245076 3300025910 Unclassified 1546
144 Ga0207684_10366624 3300025910 Bacteria 1239
145 Ga0207707_10063599 3300025912 Bacteria 3212
146 Ga0207695_10000896 3300025913 Bacteria 53929
147 Ga0207660_10029581 3300025917 Bacteria 3759
148 Ga0207660_10031726 3300025917 Bacteria 3642
149 Ga0207662_10123467 3300025918 Bacteria 1626
150 Ga0207652_10309384 3300025921 Bacteria 1426
151 Ga0207646_10000633 3300025922 Bacteria 45775
152 Ga0207646_10009344 3300025922 Bacteria 9693
153 Ga0207646_10009410 3300025922 Bacteria 9657
154 Ga0207646_10035425 3300025922 Bacteria 4508
155 Ga0207646_10095599 3300025922 Bacteria 2662
156 Ga0207694_10189191 3300025924 Bacteria 1671
157 Ga0207709_10150445 3300025935 Bacteria 1611
158 Ga0207670_10128792 3300025936 Bacteria 1851
159 Ga0207661_10573654 3300025944 Bacteria 1035
160 Ga0207667_10236366 3300025949 Bacteria 1870
161 Ga0207651_10225472 3300025960 Bacteria 1518
162 Ga0207640_10198464 3300025981 Bacteria 1518
163 Ga0207639_10332591 3300026041 Bacteria 1352
164 Ga0207708_10300057 3300026075 Archaea 1306
165 Ga0207648_10076787 3300026089 Bacteria 2912
166 Ga0207674_10003173 3300026116 Bacteria 20240
167 Ga0207675_100335233 3300026118 Unclassified 1479
168 Ga0207698_10021141 3300026142 Bacteria 4495
169 Ga0209281_1000214 3300027111 Bacteria 128147
170 Ga0209968_1021951 3300027526 Bacteria 1038
171 Ga0207428_10387977 3300027907 Bacteria 1024
172 Ga0265338_10003324 3300028800 Bacteria 22746
173 Ga0307405_10123121 3300031731 Bacteria 1778
174 Ga0307406_10246991 3300031901 Bacteria 1342
175 Ga0307409_100015824 3300031995 Bacteria 4967
176 Ga0373933_0313610 3300035724 Bacteria 1016
177 Ga0373937_0221593 3300036401 Bacteria 1781
178 Ga0395901_0029016 3300038443 Bacteria 5692
179 Ga0436365_1699388 3300039437 Unclassified 2412
180 Ga0466969_0019713 3300044656 Bacteria 3501
181 Ga0466966_0137953 3300044684 Bacteria 1491
182 Ga0466967_0038762 3300045976 Bacteria 4090
183 Ga0495625_0002486 3300046660 Bacteria 19870
184 Ga0496116_0005797 3300048919 Bacteria 11347
185 Ga0496121_0043898 3300048924 Bacteria 3864
186 Ga0496121_0234540 3300048924 Bacteria 1283
187 Ga0496122_0000134 3300048925 Bacteria 171080
188 Ga0496123_0006338 3300048926 Bacteria 11489
189 Ga0496125_0000433 3300048928 Bacteria 76686
190 Ga0496125_0051790 3300048928 Bacteria 3382
191 nmdc:mga00v17_15661_c1 3300050491 Bacteria 4259
192 nmdc:mga05p37_116332_c1 3300050507 Bacteria 3286
193 nmdc:mga05p37_402674_c1 3300050507 Unclassified 1598
194 nmdc:mga05p37_466201_c1 3300050507 Bacteria 1458
195 nmdc:mga05p37_49908_c1 3300050507 Bacteria 5147
196 nmdc:mga05p37_596622_c1 3300050507 Bacteria 1248
197 nmdc:mga05p37_728039_c1 3300050507 Eukaryota 1097
198 nmdc:mga05p37_73977_c1 3300050507 Bacteria 4194
199 nmdc:mga09592_144021_c1 3300050508 Bacteria 2055
200 nmdc:mga09592_504074_c1 3300050508 Eukaryota 1042
201 nmdc:mga0qj67_241917_c1 3300050509 Unclassified 1464
202 nmdc:mga0qj67_54542_c1 3300050509 Bacteria 3165
203 nmdc:mga0qj67_760390_c1 3300050509 Unclassified 768
204 nmdc:mga0n895_128361_c1 3300050512 Bacteria 2560
205 nmdc:mga0n895_155004_c1 3300050512 Bacteria 2321
206 nmdc:mga08x19_137828_c1 3300050514 Bacteria 1646
207 nmdc:mga0a205_60553_c1 3300050515 Bacteria 3656
208 nmdc:mga0a205_66094_c1 3300050515 Unclassified 3494
209 nmdc:mga0a205_69431_c1 3300050515 Bacteria 3402
210 nmdc:mga0a205_73940_c1 3300050515 Bacteria 3293
211 Ga0495601_0013701 3300053077 Bacteria 4878
212 Ga0495619_0106856 3300053085 Bacteria 1909
213 Ga0500618_001254 3300053125 Bacteria 11844
214 Ga0500611_003312 3300053727 Bacteria 2049

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300035724 Ga0373933_0313610 Ga0373933_0313610_36_878 232
2 3300036401 Ga0373937_0221593 Ga0373937_0221593_39_881 232
3 3300053085 Ga0495619_0106856 Ga0495619_0106856_914_1756 232
4 3300050509 nmdc:mga0qj67_760390_c1 nmdc:mga0qj67_760390_c1_14_736 233
5 3300006914 Ga0075436_100012618 Ga0075436_1000126184 234
6 3300053077 Ga0495601_0013701 Ga0495601_0013701_172_1014 235
7 3300050507 nmdc:mga05p37_466201_c1 nmdc:mga05p37_466201_c1_380_1252 236
8 3300013104 Ga0157370_10017928 Ga0157370_100179284 237
9 3300044684 Ga0466966_0137953 Ga0466966_0137953_74_901 238
10 3300044656 Ga0466969_0019713 Ga0466969_0019713_263_1090 239
11 3300005445 Ga0070708_100088664 Ga0070708_1000886643 244
12 3300005467 Ga0070706_100014141 Ga0070706_1000141414 244
13 3300005468 Ga0070707_100048760 Ga0070707_1000487604 244
14 3300005471 Ga0070698_100009871 Ga0070698_1000098713 244
15 3300005536 Ga0070697_100091905 Ga0070697_1000919053 244
16 3300025910 Ga0207684_10019451 Ga0207684_100194513 244
17 3300025922 Ga0207646_10095599 Ga0207646_100955992 244
18 3300025229 Ga0209147_106374 Ga0209147_1063742 245
19 3300031731 Ga0307405_10123121 Ga0307405_101231212 246
20 3300031995 Ga0307409_100015824 Ga0307409_1000158242 246
21 3300004803 Ga0058862_12756416 Ga0058862_127564162 251
22 3300025944 Ga0207661_10573654 Ga0207661_105736541 251
23 3300005445 Ga0070708_100017346 Ga0070708_1000173463 252
24 3300005471 Ga0070698_100000839 Ga0070698_10000083912 252
25 3300005616 Ga0068852_100328903 Ga0068852_1003289032 252
26 3300025922 Ga0207646_10009344 Ga0207646_100093444 252
27 3300026041 Ga0207639_10332591 Ga0207639_103325911 252
28 3300025981 Ga0207640_10198464 Ga0207640_101984642 253
29 3300005364 Ga0070673_100303680 Ga0070673_1003036801 258
30 3300005536 Ga0070697_100078320 Ga0070697_1000783202 258
31 3300039437 Ga0436365_1699388 Ga0436365_1699388_639_1508 258
32 3300006852 Ga0075433_10656030 Ga0075433_106560301 260
33 3300006871 Ga0075434_100168312 Ga0075434_1001683122 260
34 3300006871 Ga0075434_100433369 Ga0075434_1004333692 260
35 3300007076 Ga0075435_100486074 Ga0075435_1004860742 260
36 3300009094 Ga0111539_10202514 Ga0111539_102025142 260
37 3300009147 Ga0114129_10073783 Ga0114129_100737832 260
38 3300050512 nmdc:mga0n895_128361_c1 nmdc:mga0n895_128361_c1_1584_2390 260
39 3300050512 nmdc:mga0n895_155004_c1 nmdc:mga0n895_155004_c1_1443_2249 260
40 3300050515 nmdc:mga0a205_66094_c1 nmdc:mga0a205_66094_c1_542_1348 260
41 iso_pu_bacteria 2512564039 2512730371 260
42 3300005536 Ga0070697_100095180 Ga0070697_1000951802 262
43 3300009147 Ga0114129_10094274 Ga0114129_100942743 262
44 3300027526 Ga0209968_1021951 Ga0209968_10219511 262
45 3300050507 nmdc:mga05p37_49908_c1 nmdc:mga05p37_49908_c1_2650_3462 262
46 iso_pu_bacteria 2894652903 2894657029 262
47 3300003323 rootH1_10071780 rootH1_100717802 263
48 3300005289 Ga0065704_10232316 Ga0065704_102323161 263
49 3300005293 Ga0065715_10096904 Ga0065715_100969042 263
50 3300005293 Ga0065715_10276931 Ga0065715_102769311 263
51 3300005295 Ga0065707_10238528 Ga0065707_102385282 263
52 3300005336 Ga0070680_100016816 Ga0070680_1000168166 263
53 3300005336 Ga0070680_100090616 Ga0070680_1000906162 263
54 3300005343 Ga0070687_100071655 Ga0070687_1000716552 263
55 3300005345 Ga0070692_10027106 Ga0070692_100271062 263
56 3300005345 Ga0070692_10054479 Ga0070692_100544791 263
57 3300005406 Ga0070703_10000667 Ga0070703_100006673 263
58 3300005438 Ga0070701_10164788 Ga0070701_101647882 263
59 3300005441 Ga0070700_100063894 Ga0070700_1000638942 263
60 3300005444 Ga0070694_100047948 Ga0070694_1000479482 263
61 3300005445 Ga0070708_100002487 Ga0070708_10000248716 263
62 3300005445 Ga0070708_100063834 Ga0070708_1000638343 263
63 3300005458 Ga0070681_10264443 Ga0070681_102644432 263
64 3300005459 Ga0068867_100050596 Ga0068867_1000505963 263
65 3300005467 Ga0070706_100002117 Ga0070706_10000211712 263
66 3300005467 Ga0070706_100010169 Ga0070706_1000101696 263
67 3300005467 Ga0070706_100056916 Ga0070706_1000569162 263
68 3300005468 Ga0070707_100074419 Ga0070707_1000744193 263
69 3300005468 Ga0070707_100077503 Ga0070707_1000775033 263
70 3300005468 Ga0070707_100114500 Ga0070707_1001145002 263
71 3300005468 Ga0070707_100366382 Ga0070707_1003663822 263
72 3300005471 Ga0070698_100042835 Ga0070698_1000428353 263
73 3300005518 Ga0070699_100076739 Ga0070699_1000767392 263
74 3300005518 Ga0070699_100292375 Ga0070699_1002923752 263
75 3300005530 Ga0070679_100419911 Ga0070679_1004199111 263
76 3300005536 Ga0070697_100106733 Ga0070697_1001067333 263
77 3300005536 Ga0070697_100141207 Ga0070697_1001412072 263
78 3300005545 Ga0070695_100176018 Ga0070695_1001760181 263
79 3300005546 Ga0070696_100029499 Ga0070696_1000294993 263
80 3300005549 Ga0070704_100081042 Ga0070704_1000810423 263
81 3300005577 Ga0068857_100059014 Ga0068857_1000590144 263
82 3300006844 Ga0075428_100017022 Ga0075428_1000170222 263
83 3300006847 Ga0075431_100032298 Ga0075431_1000322983 263
84 3300006852 Ga0075433_10019809 Ga0075433_100198092 263
85 3300006852 Ga0075433_10540347 Ga0075433_105403472 263
86 3300006871 Ga0075434_100084117 Ga0075434_1000841173 263
87 3300006880 Ga0075429_100016943 Ga0075429_1000169434 263
88 3300006914 Ga0075436_100022382 Ga0075436_1000223824 263
89 3300007076 Ga0075435_100014604 Ga0075435_1000146043 263
90 3300009147 Ga0114129_10000344 Ga0114129_1000034453 263
91 3300009147 Ga0114129_10008740 Ga0114129_100087407 263
92 3300009148 Ga0105243_10024012 Ga0105243_100240123 263
93 3300009148 Ga0105243_10307717 Ga0105243_103077172 263
94 3300025885 Ga0207653_10000214 Ga0207653_1000021432 263
95 3300025908 Ga0207643_10083632 Ga0207643_100836322 263
96 3300025910 Ga0207684_10000024 Ga0207684_10000024164 263
97 3300025910 Ga0207684_10077235 Ga0207684_100772353 263
98 3300025910 Ga0207684_10245076 Ga0207684_102450762 263
99 3300025910 Ga0207684_10366624 Ga0207684_103666242 263
100 3300025912 Ga0207707_10063599 Ga0207707_100635993 263
101 3300025917 Ga0207660_10029581 Ga0207660_100295813 263
102 3300025917 Ga0207660_10031726 Ga0207660_100317263 263
103 3300025918 Ga0207662_10123467 Ga0207662_101234672 263
104 3300025921 Ga0207652_10309384 Ga0207652_103093842 263
105 3300025935 Ga0207709_10150445 Ga0207709_101504452 263
106 3300025936 Ga0207670_10128792 Ga0207670_101287922 263
107 3300025960 Ga0207651_10225472 Ga0207651_102254721 263
108 3300026075 Ga0207708_10300057 Ga0207708_103000572 263
109 3300026089 Ga0207648_10076787 Ga0207648_100767872 263
110 3300026116 Ga0207674_10003173 Ga0207674_1000317320 263
111 3300050507 nmdc:mga05p37_116332_c1 nmdc:mga05p37_116332_c1_22_837 263
112 3300050507 nmdc:mga05p37_73977_c1 nmdc:mga05p37_73977_c1_109_924 263
113 3300050514 nmdc:mga08x19_137828_c1 nmdc:mga08x19_137828_c1_112_927 263
114 3300050515 nmdc:mga0a205_73940_c1 nmdc:mga0a205_73940_c1_1562_2377 263
115 iso_pu_bacteria 2751185905 2753812596 264
116 iso_pu_bacteria 2841911363 2841916119 264
117 iso_pu_bacteria 2841917233 2841921212 264
118 3300050515 nmdc:mga0a205_69431_c1 nmdc:mga0a205_69431_c1_2341_3162 265
119 3300005468 Ga0070707_100020949 Ga0070707_1000209494 266
120 3300005471 Ga0070698_100388407 Ga0070698_1003884071 266
121 3300005616 Ga0068852_100078999 Ga0068852_1000789992 266
122 3300009093 Ga0105240_10007251 Ga0105240_100072514 266
123 3300010375 Ga0105239_10360125 Ga0105239_103601252 266
124 3300025913 Ga0207695_10000896 Ga0207695_1000089617 266
125 3300025922 Ga0207646_10035425 Ga0207646_100354254 266
126 3300026142 Ga0207698_10021141 Ga0207698_100211413 266
127 3300048919 Ga0496116_0005797 Ga0496116_0005797_1219_2082 266
128 3300048925 Ga0496122_0000134 Ga0496122_0000134_66297_67160 266
129 3300048926 Ga0496123_0006338 Ga0496123_0006338_7325_8188 266
130 3300048928 Ga0496125_0051790 Ga0496125_0051790_2416_3279 266
131 3300003775 Ga0055524_1003123 Ga0055524_10031234 269
132 3300025299 Ga0209256_1000128 Ga0209256_100012881 269
133 3300031901 Ga0307406_10246991 Ga0307406_102469912 269
134 3300045976 Ga0466967_0038762 Ga0466967_0038762_32_919 269
135 iso_pu_bacteria 2891048133 2891051228 269
136 3300005445 Ga0070708_100467135 Ga0070708_1004671352 271
137 3300005445 Ga0070708_100692476 Ga0070708_1006924761 271
138 3300005467 Ga0070706_100472670 Ga0070706_1004726702 271
139 3300005467 Ga0070706_100559328 Ga0070706_1005593281 271
140 3300005468 Ga0070707_100494009 Ga0070707_1004940091 271
141 3300005471 Ga0070698_100030461 Ga0070698_1000304614 271
142 3300005518 Ga0070699_100454509 Ga0070699_1004545092 271
143 3300005536 Ga0070697_100013995 Ga0070697_1000139955 271
144 3300025910 Ga0207684_10015800 Ga0207684_100158002 271
145 3300050515 nmdc:mga0a205_60553_c1 nmdc:mga0a205_60553_c1_1296_2144 271
146 3300005293 Ga0065715_10115857 Ga0065715_101158572 273
147 3300005440 Ga0070705_100075782 Ga0070705_1000757822 273
148 3300005444 Ga0070694_100139851 Ga0070694_1001398511 273
149 3300013297 Ga0157378_10525468 Ga0157378_105254682 273
150 3300050507 nmdc:mga05p37_596622_c1 nmdc:mga05p37_596622_c1_67_927 273
151 iso_pu_bacteria 2828305725 2828307332 273
152 iso_pu_bacteria 2839138175 2839142687 273
153 3300038443 Ga0395901_0029016 Ga0395901_0029016_1894_2745 274
154 3300053125 Ga0500618_001254 Ga0500618_001254_2397_3266 274
155 3300005445 Ga0070708_100138615 Ga0070708_1001386152 275
156 3300005564 Ga0070664_100522856 Ga0070664_1005228562 275
157 3300005842 Ga0068858_100383760 Ga0068858_1003837602 275
158 3300005937 Ga0081455_10041724 Ga0081455_100417242 275
159 3300005983 Ga0081540_1010585 Ga0081540_10105854 275
160 3300005985 Ga0081539_10154701 Ga0081539_101547012 275
161 3300006844 Ga0075428_100094255 Ga0075428_1000942553 275
162 3300006846 Ga0075430_100310778 Ga0075430_1003107782 275
163 3300006847 Ga0075431_100243528 Ga0075431_1002435282 275
164 3300006871 Ga0075434_100537648 Ga0075434_1005376482 275
165 3300006880 Ga0075429_100239652 Ga0075429_1002396522 275
166 3300009094 Ga0111539_10189062 Ga0111539_101890622 275
167 3300009147 Ga0114129_10706401 Ga0114129_107064011 275
168 3300013297 Ga0157378_10167209 Ga0157378_101672092 275
169 3300013306 Ga0163162_10274964 Ga0163162_102749642 275
170 3300014968 Ga0157379_10023137 Ga0157379_100231376 275
171 3300026118 Ga0207675_100335233 Ga0207675_1003352332 275
172 3300027907 Ga0207428_10387977 Ga0207428_103879771 275
173 3300050507 nmdc:mga05p37_402674_c1 nmdc:mga05p37_402674_c1_178_1050 275
174 3300050507 nmdc:mga05p37_728039_c1 nmdc:mga05p37_728039_c1_74_946 275
175 3300050508 nmdc:mga09592_144021_c1 nmdc:mga09592_144021_c1_703_1575 275
176 3300050508 nmdc:mga09592_504074_c1 nmdc:mga09592_504074_c1_52_924 275
177 3300050509 nmdc:mga0qj67_241917_c1 nmdc:mga0qj67_241917_c1_104_976 275
178 3300050509 nmdc:mga0qj67_54542_c1 nmdc:mga0qj67_54542_c1_1666_2538 275
179 iso_pu_bacteria 8002392321 8002392806 275
180 iso_pu_bacteria 8048746797 8048747128 275
181 3300006946 Ga0079104_1000086 Ga0079104_100008649 277
182 3300027111 Ga0209281_1000214 Ga0209281_100021470 277
183 3300048924 Ga0496121_0043898 Ga0496121_0043898_2092_2970 277
184 3300005445 Ga0070708_100330830 Ga0070708_1003308302 279
185 3300005468 Ga0070707_100005063 Ga0070707_1000050632 279
186 3300005536 Ga0070697_100073622 Ga0070697_1000736223 279
187 3300006852 Ga0075433_10021541 Ga0075433_100215412 279
188 3300006871 Ga0075434_100121617 Ga0075434_1001216172 279
189 3300025922 Ga0207646_10000633 Ga0207646_100006332 279
190 3300025922 Ga0207646_10009410 Ga0207646_100094104 279
191 3300053727 Ga0500611_003312 Ga0500611_003312_43_885 279
192 iso_pu_bacteria 2511231003 2511251757 279
193 3300005445 Ga0070708_100025322 Ga0070708_1000253222 281
194 3300005536 Ga0070697_100300679 Ga0070697_1003006792 281
195 3300006051 Ga0075364_10013473 Ga0075364_100134736 282
196 3300050491 nmdc:mga00v17_15661_c1 nmdc:mga00v17_15661_c1_124_972 282
197 3300002704 JGI25155J39150_1000567 JGI25155J39150_10005674 283
198 3300002738 JGI25154J39366_1000223 JGI25154J39366_100022326 283
199 3300025206 Ga0209435_100245 Ga0209435_1002454 283
200 3300025246 Ga0209646_1000021 Ga0209646_1000021357 283
201 3300025250 Ga0209026_1005831 Ga0209026_10058312 283
202 3300025256 Ga0209759_1000100 Ga0209759_100010021 283
203 3300046660 Ga0495625_0002486 Ga0495625_0002486_9105_9980 283
204 iso_pu_bacteria 2818991445 2819591847 283
205 iso_pu_bacteria 2884811622 2884816776 283
206 iso_pu_bacteria 2884836552 2884837658 283
207 iso_pu_bacteria 2884852848 2884853950 283
208 iso_pu_bacteria 2896154374 2896154933 283
209 3300005563 Ga0068855_100306576 Ga0068855_1003065762 285
210 3300025949 Ga0207667_10236366 Ga0207667_102363662 285
211 3300028800 Ga0265338_10003324 Ga0265338_1000332415 286
212 3300002704 JGI25155J39150_1000076 JGI25155J39150_100007624 287
213 3300002705 JGI25156J39149_1000032 JGI25156J39149_100003252 287
214 3300002737 JGI25162J39368_1003517 JGI25162J39368_10035173 287
215 3300002738 JGI25154J39366_1000095 JGI25154J39366_100009524 287
216 3300002741 JGI25157J39369_1000388 JGI25157J39369_100038816 287
217 3300003758 Ga0055532_1000083 Ga0055532_100008361 287
218 3300003761 Ga0055535_1005872 Ga0055535_10058723 287
219 3300009551 Ga0105238_10105699 Ga0105238_101056992 287
220 3300014497 Ga0182008_10027894 Ga0182008_100278943 287
221 3300025206 Ga0209435_100013 Ga0209435_10001352 287
222 3300025229 Ga0209147_100030 Ga0209147_100030302 287
223 3300025233 Ga0209437_100419 Ga0209437_1004194 287
224 3300025242 Ga0209258_100433 Ga0209258_10043348 287
225 3300025246 Ga0209646_1000034 Ga0209646_100003452 287
226 3300025250 Ga0209026_1000022 Ga0209026_100002252 287
227 3300025256 Ga0209759_1000018 Ga0209759_100001852 287
228 3300025924 Ga0207694_10189191 Ga0207694_101891912 287
229 3300048924 Ga0496121_0234540 Ga0496121_0234540_19_882 287
230 3300048928 Ga0496125_0000433 Ga0496125_0000433_62635_63498 287
231 iso_pu_bacteria 2904434214 2904436117 287

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

104

282

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
3rlf-assembly1.cif.gz_G crystal structure of the maltose-binding protein/maltose transporter complex in an outward-facing conformation bound to mgamppnp 0.834 27 277
4jbw-assembly2.cif.gz_I crystal structure of e. coli maltose transporter malfgk2 in complex with its regulatory protein eiiaglc 0.815 11 275
2r6g-assembly1.cif.gz_G the crystal structure of the e. coli maltose transporter 0.7996 26 277
4tqu-assembly1.cif.gz_N crystal structure of a bacterial abc transporter involved in the import of the acidic polysaccharide alginate 0.799 6 278
3pv0-assembly1.cif.gz_F crystal structure of a pre-translocation state mbp-maltose transporter complex without nucleotide 0.7942 62 272
ID Description Score Start End Superfamily
af_I6Y1U3_2_266_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8827 20 278 1.10.3720.10
af_O53483_6_271_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8816 16 278 1.10.3720.10
af_P10906_2_274_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8775 21 278 1.10.3720.10
af_P77716_1_267_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.876 16 272 1.10.3720.10
af_O53483_6_271_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8693 16 278 1.10.3720.10
ID Description Score Start End GO Terms
AF-A0A0F5K5H0-F1-model_v4 ABC transporter permease 0.9719 21 287 GO:0005886
GO:0055085
AF-A0A199YJ72-F1-model_v4 deleted 0.9676 27 287
AF-A0A0F5K5H0-F1-model_v4 ABC transporter permease 0.9649 21 287 GO:0005886
GO:0055085
AF-A0A199YJ72-F1-model_v4 deleted 0.9604 27 287
AF-A0A357FBC5-F1-model_v4 deleted 0.958 21 246

Feature Viewer

pLDDT pTM Quality
85.56 0.79 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map