F343459

General Info

Members Datasets Scaffolds Average Seq Length
230 147 229 250

Family's Representative Sequence

Representative Sequence 3300049587|Ga0501071_0171664|Ga0501071_0171664_494_1327
Length 277
Sequence MPPERTPRHRLDITAVVAIPVSVGLILVGQALEGGSVGSLLQLAAALIVCGGTCGAVLLSFSTAQVLQAVMALRTVLYDPLEPAADAIRRITAYAARARRTGVMTIEEDVDREPDPFLRRGLTMAVDGSSQSQIRATLEFDIDSISEHDAVAPRVFEAAGGYAPTIGIIGAVLGLIHVMENLHDPAKLGPGIATAFVATVYGVGIANLVLLPLAGKMRERARAAARRREMLLDGVLAIQEGLNPRLLEQRLAAFAADTPQKQPARVGRFALQPGERL

Samples

Sample ID Description Type Environment
1 2643221679 Angustibacter sp. Root456 Isolate Unclassified
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
18 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
25 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
26 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
31 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
32 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
33 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
34 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
35 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
39 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
40 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
41 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
42 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
43 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
44 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
45 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
46 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
47 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
48 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
49 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
50 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
81 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
82 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
83 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
84 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
85 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
86 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
87 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
88 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
89 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
90 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
91 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
92 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
93 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
94 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
95 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
96 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
97 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
98 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
99 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
100 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
101 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
102 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
103 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
104 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
105 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
106 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
107 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
108 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
109 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
110 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
111 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
112 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
113 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
114 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
115 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
116 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
117 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
118 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
119 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
120 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
121 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
126 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
127 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
128 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
129 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
130 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
131 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
132 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
133 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
134 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
135 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
136 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
137 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
138 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
139 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
140 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
141 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
142 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
143 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
144 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
145 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
146 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
147 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.57
Metatranscriptomes 0
Isolates 0.43

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.7
Nodule 0
Rhizoplane 3.48
Rhizosphere 85.22
Stem 0
Stem Tuber 0
Unclassified 2.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10005419 3300005327 Bacteria 10350
2 Ga0070683_100194651 3300005329 Bacteria 1925
3 Ga0070683_100433194 3300005329 Bacteria 1255
4 Ga0070670_100394667 3300005331 Bacteria 1221
5 Ga0068869_100306409 3300005334 Bacteria 1284
6 Ga0070682_100072879 3300005337 Bacteria 2202
7 Ga0070682_100131706 3300005337 Bacteria 1693
8 Ga0070660_100014324 3300005339 Bacteria 5712
9 Ga0070661_100001277 3300005344 Bacteria 17676
10 Ga0070661_100002059 3300005344 Bacteria 13863
11 Ga0070659_100053082 3300005366 Bacteria 3190
12 Ga0070667_100288839 3300005367 Bacteria 1474
13 Ga0070714_100011232 3300005435 Bacteria 7100
14 Ga0070681_10002015 3300005458 Bacteria 18385
15 Ga0070681_10004200 3300005458 Bacteria 13643
16 Ga0070699_100354354 3300005518 Bacteria 1322
17 Ga0070679_100002040 3300005530 Bacteria 18135
18 Ga0070679_100006055 3300005530 Bacteria 11252
19 Ga0070679_100441650 3300005530 Bacteria 1246
20 Ga0070684_100062578 3300005535 Bacteria 3260
21 Ga0070684_100315477 3300005535 Bacteria 1436
22 Ga0068853_100001354 3300005539 Bacteria 17657
23 Ga0068853_100010053 3300005539 Bacteria 7642
24 Ga0070672_100293972 3300005543 Bacteria 1376
25 Ga0070693_100088734 3300005547 Bacteria 1860
26 Ga0068855_100004025 3300005563 Bacteria 17940
27 Ga0068855_100118564 3300005563 Bacteria 3031
28 Ga0070664_100000831 3300005564 Bacteria 23811
29 Ga0070664_100047160 3300005564 Bacteria 3640
30 Ga0070664_100117001 3300005564 Bacteria 2331
31 Ga0068857_100000248 3300005577 Bacteria 36124
32 Ga0068857_100039931 3300005577 Bacteria 4159
33 Ga0068854_100009797 3300005578 Bacteria 6195
34 Ga0068856_100001850 3300005614 Bacteria 22091
35 Ga0068856_100729660 3300005614 Bacteria 1011
36 Ga0068852_100005002 3300005616 Bacteria 9428
37 Ga0068864_100261832 3300005618 Bacteria 1609
38 Ga0068864_100378515 3300005618 Bacteria 1341
39 Ga0068851_10357396 3300005834 Bacteria 851
40 Ga0068863_100060882 3300005841 Bacteria 3570
41 Ga0068858_100168116 3300005842 Bacteria 2067
42 Ga0068860_100000792 3300005843 Bacteria 35445
43 Ga0068860_100172096 3300005843 Bacteria 2092
44 Ga0068862_100197250 3300005844 Bacteria 1814
45 Ga0081539_10015073 3300005985 Bacteria 5660
46 Ga0075365_10021073 3300006038 Bacteria 4058
47 Ga0075365_10072678 3300006038 Bacteria 2317
48 Ga0075365_10382040 3300006038 Bacteria 994
49 Ga0075364_10004150 3300006051 Bacteria 8303
50 Ga0075364_10006798 3300006051 Bacteria 6746
51 Ga0075364_10098944 3300006051 Bacteria 1941
52 Ga0075367_10001636 3300006178 Bacteria 9746
53 Ga0075367_10013263 3300006178 Bacteria 4425
54 Ga0075430_100000833 3300006846 Bacteria 24117
55 Ga0075430_100055291 3300006846 Bacteria 3338
56 Ga0105240_10003585 3300009093 Bacteria 24073
57 Ga0114129_10648865 3300009147 Bacteria 1362
58 Ga0105242_10045341 3300009176 Bacteria 3563
59 Ga0105237_10559178 3300009545 Bacteria 1151
60 Ga0105238_10000431 3300009551 Bacteria 44309
61 Ga0105238_10006495 3300009551 Bacteria 11630
62 Ga0157373_10013863 3300013100 Bacteria 5911
63 Ga0157373_10018358 3300013100 Bacteria 5094
64 Ga0157371_10032241 3300013102 Bacteria 3771
65 Ga0157370_10021140 3300013104 Bacteria 6489
66 Ga0157370_10038115 3300013104 Bacteria 4652
67 Ga0157369_10001996 3300013105 Bacteria 24548
68 Ga0157369_10402132 3300013105 Bacteria 1421
69 Ga0157374_10187132 3300013296 Bacteria 2024
70 Ga0157372_10007095 3300013307 Bacteria 11943
71 Ga0157372_10025560 3300013307 Bacteria 6423
72 Ga0157375_10550911 3300013308 Bacteria 1315
73 Ga0213872_10000485 3300021361 Bacteria 31868
74 Ga0209026_1003331 3300025250 Bacteria 5346
75 Ga0207656_10057837 3300025321 Bacteria 1692
76 Ga0207707_10013134 3300025912 Bacteria 7216
77 Ga0207695_10008664 3300025913 Bacteria 12691
78 Ga0207671_10410588 3300025914 Bacteria 1077
79 Ga0207660_10037565 3300025917 Bacteria 3376
80 Ga0207660_10113685 3300025917 Bacteria 2041
81 Ga0207657_10025585 3300025919 Bacteria 5440
82 Ga0207649_10003083 3300025920 Bacteria 9148
83 Ga0207649_10009258 3300025920 Bacteria 5387
84 Ga0207652_10029819 3300025921 Bacteria 4565
85 Ga0207652_10132653 3300025921 Bacteria 2223
86 Ga0207652_10330641 3300025921 Bacteria 1376
87 Ga0207652_10351160 3300025921 Bacteria 1331
88 Ga0207694_10001762 3300025924 Bacteria 18156
89 Ga0207694_10007638 3300025924 Bacteria 8194
90 Ga0207664_10002484 3300025929 Bacteria 12201
91 Ga0207690_10011615 3300025932 Bacteria 5263
92 Ga0207690_10311510 3300025932 Bacteria 1235
93 Ga0207706_10080194 3300025933 Bacteria 2870
94 Ga0207686_10309157 3300025934 Bacteria 1177
95 Ga0207691_10047097 3300025940 Bacteria 3959
96 Ga0207661_10120231 3300025944 Bacteria 2235
97 Ga0207679_10004989 3300025945 Bacteria 8286
98 Ga0207679_10028729 3300025945 Bacteria 3863
99 Ga0207679_10508137 3300025945 Bacteria 1076
100 Ga0207667_10002620 3300025949 Bacteria 22289
101 Ga0207640_10011722 3300025981 Bacteria 4970
102 Ga0207658_10028095 3300025986 Bacteria 3959
103 Ga0207639_10004329 3300026041 Bacteria 9570
104 Ga0207639_10006300 3300026041 Bacteria 8061
105 Ga0207678_10092048 3300026067 Bacteria 2592
106 Ga0207678_10548287 3300026067 Bacteria 1011
107 Ga0207702_10015797 3300026078 Bacteria 6251
108 Ga0207641_10117164 3300026088 Bacteria 2371
109 Ga0207648_10293783 3300026089 Bacteria 1456
110 Ga0207676_10131886 3300026095 Bacteria 2126
111 Ga0207676_10320945 3300026095 Bacteria 1422
112 Ga0207674_10000040 3300026116 Bacteria 130571
113 Ga0207674_10026994 3300026116 Bacteria 6087
114 Ga0207683_10133442 3300026121 Bacteria 2234
115 Ga0207698_10010719 3300026142 Bacteria 5913
116 Ga0268265_10128054 3300028380 Bacteria 2105
117 Ga0268264_10000305 3300028381 Bacteria 78992
118 Ga0268264_10109115 3300028381 Bacteria 2420
119 Ga0265324_10038245 3300029957 Bacteria 1665
120 Ga0265332_10037517 3300031238 Bacteria 2101
121 Ga0265320_10059599 3300031240 Bacteria 1825
122 Ga0265339_10049723 3300031249 Bacteria 2295
123 Ga0265316_10323132 3300031344 Bacteria 1121
124 Ga0265313_10014196 3300031595 Bacteria 4723
125 Ga0265313_10017123 3300031595 Bacteria 4134
126 Ga0265342_10040252 3300031712 Bacteria 2836
127 Ga0307409_100229479 3300031995 Bacteria 1682
128 Ga0307415_100082167 3300032126 Bacteria 2304
129 Ga0373952_0000694 3300035092 Bacteria 5979
130 Ga0373960_0003021 3300035121 Bacteria 3796
131 Ga0316574_0015092 3300035398 Bacteria 4478
132 Ga0395900_0283327 3300037418 Bacteria 1648
133 Ga0395900_0457736 3300037418 Bacteria 1231
134 Ga0395898_0044400 3300037466 Bacteria 4375
135 Ga0395905_0008153 3300037471 Bacteria 10347
136 Ga0395905_0037586 3300037471 Bacteria 4545
137 Ga0395901_0375925 3300038443 Bacteria 1463
138 Ga0400484_02420 3300038725 Bacteria 21755
139 Ga0400490_32974 3300038726 Bacteria 7736
140 Ga0400483_105179 3300039062 Bacteria 1891
141 Ga0400483_279248 3300039062 Bacteria 1846
142 Ga0436361_0875769 3300039447 Bacteria 32444
143 Ga0451577_0000284 3300042876 Bacteria 98326
144 Ga0451577_0032888 3300042876 Bacteria 4675
145 Ga0451577_0062752 3300042876 Bacteria 3314
146 Ga0451577_0461050 3300042876 Bacteria 1154
147 Ga0453683_0225132 3300044673 Bacteria 1193
148 Ga0466961_0185211 3300044693 Bacteria 1292
149 Ga0466963_0022623 3300044694 Bacteria 3983
150 Ga0453684_0000102 3300044712 Bacteria 366870
151 Ga0453684_0000114 3300044712 Bacteria 356610
152 Ga0453684_0000149 3300044712 Bacteria 307732
153 Ga0453684_0001320 3300044712 Bacteria 73258
154 Ga0453684_0062008 3300044712 Bacteria 4793
155 Ga0453684_0353765 3300044712 Bacteria 1655
156 Ga0453684_0619377 3300044712 Bacteria 1184
157 Ga0453684_1145135 3300044712 Bacteria 819
158 Ga0466971_0169622 3300044719 Bacteria 1024
159 Ga0466960_0162207 3300044901 Bacteria 1201
160 Ga0451576_0000184 3300045051 Bacteria 157166
161 Ga0451576_0002414 3300045051 Bacteria 28029
162 Ga0451576_0004743 3300045051 Bacteria 17463
163 Ga0451576_0009624 3300045051 Bacteria 11180
164 Ga0451576_0021820 3300045051 Bacteria 6952
165 Ga0451576_0028830 3300045051 Bacteria 5945
166 Ga0451576_0036310 3300045051 Bacteria 5225
167 Ga0451576_0039360 3300045051 Bacteria 5004
168 Ga0451576_0118881 3300045051 Bacteria 2751
169 Ga0451576_0553560 3300045051 Bacteria 1208
170 Ga0466958_0089090 3300045836 Bacteria 1907
171 Ga0466967_0022490 3300045976 Bacteria 5146
172 Ga0466967_0090315 3300045976 Bacteria 2782
173 Ga0466967_0330169 3300045976 Bacteria 1473
174 Ga0495643_0003412 3300046522 Bacteria 11668
175 Ga0495642_0005084 3300046528 Bacteria 5065
176 Ga0495642_0050049 3300046528 Bacteria 1717
177 Ga0495597_0005014 3300046542 Bacteria 7104
178 Ga0495668_0147470 3300046616 Bacteria 1288
179 Ga0495661_0003950 3300046665 Bacteria 10832
180 Ga0495687_005578 3300047443 Bacteria 7975
181 Ga0495687_010693 3300047443 Bacteria 5010
182 Ga0496105_0517679 3300048908 Bacteria 935
183 Ga0496105_0519466 3300048908 Bacteria 933
184 Ga0496108_0171544 3300048911 Bacteria 1877
185 Ga0496108_0379046 3300048911 Bacteria 1235
186 Ga0496109_0579363 3300048912 Bacteria 1058
187 Ga0496110_0119149 3300048913 Bacteria 2377
188 Ga0496110_0203984 3300048913 Bacteria 1797
189 Ga0496112_0016031 3300048915 Bacteria 7006
190 Ga0501031_0084177 3300049568 Bacteria 2073
191 Ga0501034_0033812 3300049571 Bacteria 5183
192 Ga0501034_0035912 3300049571 Bacteria 5025
193 Ga0501040_0318793 3300049576 Bacteria 1112
194 Ga0501047_0080131 3300049581 Bacteria 3139
195 Ga0501067_0036351 3300049583 Bacteria 2734
196 Ga0501067_0113163 3300049583 Bacteria 1509
197 Ga0501068_0305267 3300049584 Bacteria 1019
198 Ga0501070_0028050 3300049586 Bacteria 4721
199 Ga0501071_0171664 3300049587 Bacteria 1623
200 Ga0501072_0011450 3300049588 Bacteria 6780
201 Ga0501072_0497395 3300049588 Bacteria 964
202 Ga0501073_0004370 3300049589 Bacteria 10615
203 Ga0501074_0180860 3300049590 Bacteria 1504
204 Ga0501074_0188268 3300049590 Bacteria 1472
205 Ga0501075_0060049 3300049591 Bacteria 2865
206 Ga0501076_0060744 3300049592 Bacteria 3007
207 Ga0501076_0168760 3300049592 Bacteria 1784
208 Ga0501076_0342066 3300049592 Bacteria 1228
209 Ga0501077_0167610 3300049593 Bacteria 1395
210 Ga0501079_0111483 3300049741 Bacteria 2126
211 Ga0501080_0010451 3300049742 Bacteria 8497
212 Ga0501080_0170667 3300049742 Bacteria 2006
213 Ga0501083_0031948 3300049744 Bacteria 3611
214 Ga0501083_0089925 3300049744 Bacteria 2028
215 Ga0501280_001135 3300049776 Bacteria 5313
216 nmdc:mga03n38_32430_c1 3300050490 Bacteria 2213
217 nmdc:mga00v17_18341_c1 3300050491 Bacteria 3973
218 nmdc:mga00v17_192315_c1 3300050491 Bacteria 1318
219 nmdc:mga00v17_527234_c1 3300050491 Bacteria 765
220 nmdc:mga00v17_8037_c1 3300050491 Bacteria 5661
221 nmdc:mga0yw44_40888_c1 3300050492 Bacteria 2758
222 nmdc:mga0yw44_72632_c1 3300050492 Bacteria 2139
223 nmdc:mga06z11_41737_c1 3300050494 Bacteria 2297
224 nmdc:mga0qj67_245430_c1 3300050509 Bacteria 1453
225 nmdc:mga0qj67_9451_c1 3300050509 Bacteria 7257
226 Ga0500597_206320 3300053120 Bacteria 823
227 Ga0500636_0001629 3300053177 Bacteria 12252
228 Ga0500637_0005838 3300053178 Bacteria 6000
229 Ga0500625_035032 3300053729 Bacteria 2378

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300050491 nmdc:mga00v17_527234_c1 nmdc:mga00v17_527234_c1_122_751 209
2 3300005563 Ga0068855_100118564 Ga0068855_1001185644 211
3 3300037418 Ga0395900_0283327 Ga0395900_0283327_771_1541 213
4 3300037466 Ga0395898_0044400 Ga0395898_0044400_1737_2507 220
5 3300044712 Ga0453684_0062008 Ga0453684_0062008_2190_2930 230
6 3300045051 Ga0451576_0009624 Ga0451576_0009624_5135_5875 230
7 3300009147 Ga0114129_10648865 Ga0114129_106488652 236
8 3300049583 Ga0501067_0113163 Ga0501067_0113163_779_1492 237
9 3300049588 Ga0501072_0497395 Ga0501072_0497395_164_904 237
10 3300049592 Ga0501076_0168760 Ga0501076_0168760_413_1153 237
11 3300006038 Ga0075365_10021073 Ga0075365_100210735 238
12 3300005614 Ga0068856_100729660 Ga0068856_1007296601 241
13 3300049576 Ga0501040_0318793 Ga0501040_0318793_202_975 243
14 3300021361 Ga0213872_10000485 Ga0213872_100004852 244
15 3300025250 Ga0209026_1003331 Ga0209026_10033313 244
16 3300039447 Ga0436361_0875769 Ga0436361_0875769_30521_31255 244
17 3300035092 Ga0373952_0000694 Ga0373952_0000694_3303_4040 245
18 3300035121 Ga0373960_0003021 Ga0373960_0003021_2517_3254 245
19 3300039062 Ga0400483_105179 Ga0400483_105179_1048_1785 245
20 3300039062 Ga0400483_279248 Ga0400483_279248_742_1479 245
21 3300045051 Ga0451576_0021820 Ga0451576_0021820_144_881 245
22 3300005331 Ga0070670_100394667 Ga0070670_1003946671 246
23 3300005334 Ga0068869_100306409 Ga0068869_1003064092 246
24 3300005337 Ga0070682_100131706 Ga0070682_1001317062 246
25 3300005344 Ga0070661_100002059 Ga0070661_10000205910 246
26 3300005367 Ga0070667_100288839 Ga0070667_1002888392 246
27 3300005458 Ga0070681_10002015 Ga0070681_100020156 246
28 3300005530 Ga0070679_100002040 Ga0070679_10000204013 246
29 3300005530 Ga0070679_100441650 Ga0070679_1004416502 246
30 3300005539 Ga0068853_100001354 Ga0068853_10000135410 246
31 3300005543 Ga0070672_100293972 Ga0070672_1002939722 246
32 3300005547 Ga0070693_100088734 Ga0070693_1000887342 246
33 3300005564 Ga0070664_100047160 Ga0070664_1000471601 246
34 3300005564 Ga0070664_100117001 Ga0070664_1001170013 246
35 3300005577 Ga0068857_100039931 Ga0068857_1000399314 246
36 3300005618 Ga0068864_100261832 Ga0068864_1002618322 246
37 3300005618 Ga0068864_100378515 Ga0068864_1003785152 246
38 3300005841 Ga0068863_100060882 Ga0068863_1000608824 246
39 3300005843 Ga0068860_100172096 Ga0068860_1001720963 246
40 3300005844 Ga0068862_100197250 Ga0068862_1001972502 246
41 3300005985 Ga0081539_10015073 Ga0081539_100150734 246
42 3300006846 Ga0075430_100055291 Ga0075430_1000552912 246
43 3300013100 Ga0157373_10013863 Ga0157373_100138638 246
44 3300013104 Ga0157370_10021140 Ga0157370_100211403 246
45 3300013105 Ga0157369_10402132 Ga0157369_104021322 246
46 3300013307 Ga0157372_10025560 Ga0157372_100255602 246
47 3300013308 Ga0157375_10550911 Ga0157375_105509111 246
48 3300025321 Ga0207656_10057837 Ga0207656_100578372 246
49 3300025917 Ga0207660_10113685 Ga0207660_101136853 246
50 3300025920 Ga0207649_10009258 Ga0207649_100092582 246
51 3300025921 Ga0207652_10029819 Ga0207652_100298193 246
52 3300025921 Ga0207652_10330641 Ga0207652_103306411 246
53 3300025921 Ga0207652_10351160 Ga0207652_103511602 246
54 3300025932 Ga0207690_10311510 Ga0207690_103115102 246
55 3300025933 Ga0207706_10080194 Ga0207706_100801943 246
56 3300025940 Ga0207691_10047097 Ga0207691_100470974 246
57 3300025945 Ga0207679_10028729 Ga0207679_100287292 246
58 3300025945 Ga0207679_10508137 Ga0207679_105081371 246
59 3300026041 Ga0207639_10004329 Ga0207639_100043299 246
60 3300026067 Ga0207678_10548287 Ga0207678_105482872 246
61 3300026088 Ga0207641_10117164 Ga0207641_101171643 246
62 3300026095 Ga0207676_10131886 Ga0207676_101318862 246
63 3300026095 Ga0207676_10320945 Ga0207676_103209452 246
64 3300026116 Ga0207674_10026994 Ga0207674_100269943 246
65 3300026121 Ga0207683_10133442 Ga0207683_101334422 246
66 3300028380 Ga0268265_10128054 Ga0268265_101280542 246
67 3300028381 Ga0268264_10109115 Ga0268264_101091152 246
68 3300029957 Ga0265324_10038245 Ga0265324_100382452 246
69 3300031238 Ga0265332_10037517 Ga0265332_100375172 246
70 3300031344 Ga0265316_10323132 Ga0265316_103231322 246
71 3300037418 Ga0395900_0457736 Ga0395900_0457736_110_850 246
72 3300037471 Ga0395905_0008153 Ga0395905_0008153_2680_3420 246
73 3300037471 Ga0395905_0037586 Ga0395905_0037586_1796_2536 246
74 3300038725 Ga0400484_02420 Ga0400484_02420_14649_15389 246
75 3300038726 Ga0400490_32974 Ga0400490_32974_3122_3862 246
76 3300042876 Ga0451577_0000284 Ga0451577_0000284_79520_80260 246
77 3300042876 Ga0451577_0032888 Ga0451577_0032888_1751_2491 246
78 3300042876 Ga0451577_0062752 Ga0451577_0062752_555_1295 246
79 3300042876 Ga0451577_0461050 Ga0451577_0461050_255_995 246
80 3300044673 Ga0453683_0225132 Ga0453683_0225132_67_807 246
81 3300044712 Ga0453684_0000102 Ga0453684_0000102_336416_337156 246
82 3300044712 Ga0453684_0000114 Ga0453684_0000114_93522_94262 246
83 3300044712 Ga0453684_0000149 Ga0453684_0000149_271387_272127 246
84 3300044712 Ga0453684_0001320 Ga0453684_0001320_42817_43557 246
85 3300044712 Ga0453684_0353765 Ga0453684_0353765_231_971 246
86 3300044712 Ga0453684_0619377 Ga0453684_0619377_123_863 246
87 3300044712 Ga0453684_1145135 Ga0453684_1145135_45_785 246
88 3300045051 Ga0451576_0000184 Ga0451576_0000184_17761_18501 246
89 3300045051 Ga0451576_0002414 Ga0451576_0002414_2829_3569 246
90 3300045051 Ga0451576_0004743 Ga0451576_0004743_10549_11289 246
91 3300045051 Ga0451576_0028830 Ga0451576_0028830_5127_5867 246
92 3300045051 Ga0451576_0036310 Ga0451576_0036310_4022_4762 246
93 3300045051 Ga0451576_0039360 Ga0451576_0039360_3890_4630 246
94 3300045051 Ga0451576_0118881 Ga0451576_0118881_1440_2180 246
95 3300045051 Ga0451576_0553560 Ga0451576_0553560_277_1017 246
96 3300046522 Ga0495643_0003412 Ga0495643_0003412_4579_5319 246
97 3300046528 Ga0495642_0005084 Ga0495642_0005084_2742_3482 246
98 3300046528 Ga0495642_0050049 Ga0495642_0050049_155_895 246
99 3300046542 Ga0495597_0005014 Ga0495597_0005014_3828_4568 246
100 3300046616 Ga0495668_0147470 Ga0495668_0147470_243_983 246
101 3300046665 Ga0495661_0003950 Ga0495661_0003950_4569_5309 246
102 3300047443 Ga0495687_005578 Ga0495687_005578_3537_4277 246
103 3300047443 Ga0495687_010693 Ga0495687_010693_3427_4167 246
104 3300048908 Ga0496105_0517679 Ga0496105_0517679_103_843 246
105 3300048911 Ga0496108_0171544 Ga0496108_0171544_1051_1791 246
106 3300048913 Ga0496110_0119149 Ga0496110_0119149_1041_1781 246
107 3300048915 Ga0496112_0016031 Ga0496112_0016031_2454_3194 246
108 3300049571 Ga0501034_0033812 Ga0501034_0033812_3326_4066 246
109 3300049583 Ga0501067_0036351 Ga0501067_0036351_974_1714 246
110 3300049584 Ga0501068_0305267 Ga0501068_0305267_135_875 246
111 3300049586 Ga0501070_0028050 Ga0501070_0028050_2815_3555 246
112 3300049588 Ga0501072_0011450 Ga0501072_0011450_5166_5906 246
113 3300049589 Ga0501073_0004370 Ga0501073_0004370_6691_7431 246
114 3300049590 Ga0501074_0180860 Ga0501074_0180860_169_909 246
115 3300049742 Ga0501080_0010451 Ga0501080_0010451_1462_2202 246
116 3300049742 Ga0501080_0170667 Ga0501080_0170667_468_1208 246
117 3300049744 Ga0501083_0031948 Ga0501083_0031948_1322_2062 246
118 3300049744 Ga0501083_0089925 Ga0501083_0089925_685_1425 246
119 3300050509 nmdc:mga0qj67_245430_c1 nmdc:mga0qj67_245430_c1_266_1006 246
120 3300009176 Ga0105242_10045341 Ga0105242_100453414 247
121 3300025934 Ga0207686_10309157 Ga0207686_103091572 247
122 3300053120 Ga0500597_206320 Ga0500597_206320_53_796 247
123 3300053177 Ga0500636_0001629 Ga0500636_0001629_3300_4043 247
124 3300053178 Ga0500637_0005838 Ga0500637_0005838_3394_4137 247
125 3300053729 Ga0500625_035032 Ga0500625_035032_1316_2059 247
126 3300005329 Ga0070683_100194651 Ga0070683_1001946511 248
127 3300005337 Ga0070682_100072879 Ga0070682_1000728792 248
128 3300005339 Ga0070660_100014324 Ga0070660_1000143244 248
129 3300005344 Ga0070661_100001277 Ga0070661_10000127710 248
130 3300005366 Ga0070659_100053082 Ga0070659_1000530821 248
131 3300005435 Ga0070714_100011232 Ga0070714_1000112324 248
132 3300005458 Ga0070681_10004200 Ga0070681_100042003 248
133 3300005530 Ga0070679_100006055 Ga0070679_10000605513 248
134 3300005535 Ga0070684_100062578 Ga0070684_1000625782 248
135 3300005539 Ga0068853_100010053 Ga0068853_1000100534 248
136 3300005563 Ga0068855_100004025 Ga0068855_1000040254 248
137 3300005564 Ga0070664_100000831 Ga0070664_10000083113 248
138 3300005577 Ga0068857_100000248 Ga0068857_10000024832 248
139 3300005578 Ga0068854_100009797 Ga0068854_1000097973 248
140 3300005614 Ga0068856_100001850 Ga0068856_1000018504 248
141 3300005616 Ga0068852_100005002 Ga0068852_1000050023 248
142 3300009093 Ga0105240_10003585 Ga0105240_1000358514 248
143 3300009545 Ga0105237_10559178 Ga0105237_105591782 248
144 3300009551 Ga0105238_10000431 Ga0105238_1000043132 248
145 3300013100 Ga0157373_10018358 Ga0157373_100183584 248
146 3300013102 Ga0157371_10032241 Ga0157371_100322413 248
147 3300013104 Ga0157370_10038115 Ga0157370_100381155 248
148 3300013105 Ga0157369_10001996 Ga0157369_100019965 248
149 3300013296 Ga0157374_10187132 Ga0157374_101871322 248
150 3300013307 Ga0157372_10007095 Ga0157372_100070955 248
151 3300025912 Ga0207707_10013134 Ga0207707_100131348 248
152 3300025913 Ga0207695_10008664 Ga0207695_100086644 248
153 3300025914 Ga0207671_10410588 Ga0207671_104105881 248
154 3300025917 Ga0207660_10037565 Ga0207660_100375653 248
155 3300025919 Ga0207657_10025585 Ga0207657_100255854 248
156 3300025920 Ga0207649_10003083 Ga0207649_1000308311 248
157 3300025921 Ga0207652_10132653 Ga0207652_101326531 248
158 3300025924 Ga0207694_10001762 Ga0207694_1000176219 248
159 3300025929 Ga0207664_10002484 Ga0207664_100024843 248
160 3300025932 Ga0207690_10011615 Ga0207690_100116154 248
161 3300025944 Ga0207661_10120231 Ga0207661_101202312 248
162 3300025945 Ga0207679_10004989 Ga0207679_100049893 248
163 3300025949 Ga0207667_10002620 Ga0207667_1000262021 248
164 3300025981 Ga0207640_10011722 Ga0207640_100117222 248
165 3300026041 Ga0207639_10006300 Ga0207639_100063009 248
166 3300026067 Ga0207678_10092048 Ga0207678_100920483 248
167 3300026078 Ga0207702_10015797 Ga0207702_100157975 248
168 3300026116 Ga0207674_10000040 Ga0207674_1000004053 248
169 3300026142 Ga0207698_10010719 Ga0207698_100107191 248
170 3300038443 Ga0395901_0375925 Ga0395901_0375925_44_817 248
171 3300048908 Ga0496105_0519466 Ga0496105_0519466_41_787 248
172 3300006038 Ga0075365_10382040 Ga0075365_103820401 250
173 3300049776 Ga0501280_001135 Ga0501280_001135_1864_2622 250
174 iso_pu_bacteria 2643221679 2644443881 251
175 3300035398 Ga0316574_0015092 Ga0316574_0015092_3196_3954 252
176 3300049571 Ga0501034_0035912 Ga0501034_0035912_2148_2942 252
177 3300049581 Ga0501047_0080131 Ga0501047_0080131_1146_1940 252
178 3300005834 Ga0068851_10357396 Ga0068851_103573961 254
179 3300044693 Ga0466961_0185211 Ga0466961_0185211_427_1197 255
180 3300045976 Ga0466967_0022490 Ga0466967_0022490_3417_4184 255
181 3300045976 Ga0466967_0090315 Ga0466967_0090315_688_1455 255
182 3300049591 Ga0501075_0060049 Ga0501075_0060049_169_936 255
183 3300049592 Ga0501076_0060744 Ga0501076_0060744_1928_2695 255
184 3300049593 Ga0501077_0167610 Ga0501077_0167610_261_1028 255
185 3300005518 Ga0070699_100354354 Ga0070699_1003543542 256
186 3300005842 Ga0068858_100168116 Ga0068858_1001681162 256
187 3300005843 Ga0068860_100000792 Ga0068860_10000079225 256
188 3300006038 Ga0075365_10072678 Ga0075365_100726781 256
189 3300006051 Ga0075364_10004150 Ga0075364_100041505 256
190 3300006051 Ga0075364_10006798 Ga0075364_100067984 256
191 3300006051 Ga0075364_10098944 Ga0075364_100989443 256
192 3300006178 Ga0075367_10013263 Ga0075367_100132633 256
193 3300025986 Ga0207658_10028095 Ga0207658_100280954 256
194 3300026089 Ga0207648_10293783 Ga0207648_102937832 256
195 3300028381 Ga0268264_10000305 Ga0268264_1000030546 256
196 3300031995 Ga0307409_100229479 Ga0307409_1002294792 256
197 3300032126 Ga0307415_100082167 Ga0307415_1000821672 256
198 3300044901 Ga0466960_0162207 Ga0466960_0162207_386_1156 256
199 3300050490 nmdc:mga03n38_32430_c1 nmdc:mga03n38_32430_c1_1329_2099 256
200 3300050491 nmdc:mga00v17_18341_c1 nmdc:mga00v17_18341_c1_2802_3572 256
201 3300050491 nmdc:mga00v17_192315_c1 nmdc:mga00v17_192315_c1_281_1051 256
202 3300050491 nmdc:mga00v17_8037_c1 nmdc:mga00v17_8037_c1_3737_4507 256
203 3300050492 nmdc:mga0yw44_40888_c1 nmdc:mga0yw44_40888_c1_1587_2357 256
204 3300050492 nmdc:mga0yw44_72632_c1 nmdc:mga0yw44_72632_c1_385_1155 256
205 3300050494 nmdc:mga06z11_41737_c1 nmdc:mga06z11_41737_c1_1149_1919 256
206 3300044694 Ga0466963_0022623 Ga0466963_0022623_1034_1807 257
207 3300044719 Ga0466971_0169622 Ga0466971_0169622_94_867 257
208 3300045836 Ga0466958_0089090 Ga0466958_0089090_502_1275 257
209 3300045976 Ga0466967_0330169 Ga0466967_0330169_240_1013 257
210 3300049568 Ga0501031_0084177 Ga0501031_0084177_1117_1890 257
211 3300049590 Ga0501074_0188268 Ga0501074_0188268_154_927 257
212 3300049592 Ga0501076_0342066 Ga0501076_0342066_432_1205 257
213 3300005327 Ga0070658_10005419 Ga0070658_100054197 258
214 3300005329 Ga0070683_100433194 Ga0070683_1004331942 258
215 3300005535 Ga0070684_100315477 Ga0070684_1003154773 258
216 3300006178 Ga0075367_10001636 Ga0075367_100016364 258
217 3300006846 Ga0075430_100000833 Ga0075430_10000083330 258
218 3300009551 Ga0105238_10006495 Ga0105238_100064959 258
219 3300025924 Ga0207694_10007638 Ga0207694_100076384 258
220 3300031240 Ga0265320_10059599 Ga0265320_100595992 258
221 3300031249 Ga0265339_10049723 Ga0265339_100497232 258
222 3300031595 Ga0265313_10014196 Ga0265313_100141965 258
223 3300031595 Ga0265313_10017123 Ga0265313_100171233 258
224 3300031712 Ga0265342_10040252 Ga0265342_100402523 258
225 3300048911 Ga0496108_0379046 Ga0496108_0379046_225_1037 258
226 3300048912 Ga0496109_0579363 Ga0496109_0579363_111_923 258
227 3300048913 Ga0496110_0203984 Ga0496110_0203984_439_1251 258
228 3300049587 Ga0501071_0171664 Ga0501071_0171664_494_1327 258
229 3300049741 Ga0501079_0111483 Ga0501079_0111483_341_1174 258
230 3300050509 nmdc:mga0qj67_9451_c1 nmdc:mga0qj67_9451_c1_4144_4968 258

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01618

MotA_ExbB

MotA/TolQ/ExbB proton channel family

109

230

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
6ykp-assembly1.cif.gz_C structure of unplugged c. jejuni motab 0.938 1 250
8gqy-assembly1.cif.gz_A cryoem structure of pentameric mota from aquifex aeolicus 0.9271 1 243
8brd-assembly1.cif.gz_B mechanisms of ion selectivity and rotor coupling in the bacterial flagellar sodium-driven stator unit 0.9175 22 247
6ykp-assembly1.cif.gz_C structure of unplugged c. jejuni motab 0.9169 1 250
6ysl-assembly1.cif.gz_C structure of the flagellar motab stator complex from bacillus subtilis 0.9092 2 244
ID Description Score Start End Superfamily
af_K7M555_1_200_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.4415 75 241 1.20.1070.10
2ch7B00 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Methyl-accepting chemotaxis protein 0.4383 40 246 1.10.287.950
af_P02942_216_518_1.10.287.950 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Methyl-accepting chemotaxis protein 0.4358 40 245 1.10.287.950
3zx6B00 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Methyl-accepting chemotaxis protein 0.4224 40 245 1.10.287.950
3g67A00 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Methyl-accepting chemotaxis protein 0.4212 59 245 1.10.287.950
ID Description Score Start End GO Terms
AF-A0A2H5YSP3-F1-model_v4 Chemotaxis protein PomA 0.9825 1 244 GO:0005886
GO:0006935
GO:0015031
GO:0071978
AF-A0A7V5C1J6-F1-model_v4 Motility protein A 0.982 4 244 GO:0005886
GO:0006935
GO:0071978
GO:1902600
AF-A0A3B9L6Q9-F1-model_v4 Flagellar motor protein 0.9816 1 245 GO:0005886
GO:0006935
GO:0015031
GO:0071978
AF-A0A7Y5GGF4-F1-model_v4 Flagellar motor protein 0.9805 2 245 GO:0005886
GO:0006935
GO:0071978
GO:1902600
AF-A0A356U831-F1-model_v4 Motility protein A 0.9805 82 244 GO:0005886
GO:0006935
GO:0015031
GO:0071978

Feature Viewer

pLDDT pTM Quality
86.38 0.75 High
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Predicted Structure (AlphaFold2)

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