F343358

General Info

Members Datasets Scaffolds Average Seq Length
230 165 460 533

Family's Representative Sequence

Representative Sequence 3300046660|Ga0495625_0008332|Ga0495625_0008332_3405_5123
Length 572
Sequence MDQEALQHRVRRPRPKAAFPRVSNFVPHLVGGLAASLLLAQAAHADMPRLETQGSAQRLVVDGKPMLVLGGELGNSSASSQAYMARYWPKLKAMNLNTVLAPVSWELIEPKEGSFDFSSVDGLIKDARAQDMHLVILWFGAWKNSMSTYVPSWVKRDDVRFPRAKAANGVSQEILSAFGANTRDADARAYAALLAHLKAVDAKGTVLMVQVENEIGMLPVAREWGPEANAAWAGPVPAELLQRLSAGGNAIEPELRALWQAHGSKTSGTWAQVFGDADAGQEVFTAWFYARYTDAVTRAGKAAYPLPMYVNVALNRAGKAPGEYPSGGPLPHLIDVWKTGAPSLDLISPDIYFPNFNDLAGRYKRPDNSLFIPEANNVGAPETPANAFYAIGKLDAFGFSPFQVENAEPKEQEAVTQAYGVLKQLTPAILAAQGLNKMSGFKPRVLEDGTVLDQPVSQTIGDYKFTVGFVDPWTPKADQKTAGHGGVMIQIGPEEYLMAGRGLVVTFAGAGDGVDKTGAIAGIDSAVEGVFDAQGRWVPGRVLNGDQTHQGRHIRLPPDQFQIQRVKLYRYR

Samples

Sample ID Description Type Environment
1 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
2 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
3 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
4 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
5 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
6 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
7 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
8 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
9 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
10 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
11 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
12 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
13 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
14 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
15 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
16 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
17 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
18 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
19 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
20 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
21 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
22 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
23 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
24 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
25 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
26 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
27 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
28 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
29 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
30 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
31 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
32 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
33 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
34 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
35 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
36 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
37 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
38 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
39 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
40 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
41 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
42 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
43 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
44 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
45 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
46 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
48 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
58 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
59 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
60 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
61 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
62 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
64 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
66 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
67 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
68 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
70 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
95 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
96 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
97 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
98 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
99 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
100 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
101 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
102 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
103 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
104 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
105 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
106 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
107 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
108 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
109 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
110 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
111 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
112 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
113 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
114 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
115 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
116 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
117 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
118 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
119 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
120 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
121 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
122 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
123 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
124 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
125 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
126 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
127 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
128 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
129 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
130 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
131 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
132 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
133 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
134 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
135 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
136 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
137 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
138 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
139 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
140 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
141 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
142 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
143 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
144 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
145 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
146 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
147 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
148 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
149 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
150 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
151 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
152 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
153 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
154 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
155 2582581279 Caulobacter henricii OK261 Isolate Rhizosphere
156 2582581280 Caulobacter henricii CF287 Isolate Rhizosphere
157 2582581293 Caulobacter henricii YR570 Isolate Rhizosphere
158 2643221552 Caulobacter sp. Root1472 Isolate Unclassified
159 2643221584 Caulobacter sp. Root656 Isolate Unclassified
160 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
161 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
162 2849560528 Caulobacter zeae 410 Isolate Unclassified
163 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
164 2851153111 Caulobacter radicis 736 Isolate Unclassified
165 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.22
Metatranscriptomes 0
Isolates 4.78

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 23.48
Nodule 0
Rhizoplane 1.74
Rhizosphere 68.26
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495625_0008332 3300046660 Bacteria 8851
2 JGI24736J21556_1000442 3300001904 Bacteria 7794
3 JGI24741J21665_1000027 3300001915 Bacteria 34739
4 JGI24740J21852_10022216 3300001979 Bacteria 2188
5 JGI24739J22299_10031001 3300001989 Bacteria 1850
6 JGI24737J22298_10000295 3300001990 Bacteria 16561
7 JGI24737J22298_10000529 3300001990 Bacteria 13396
8 JGI24735J21928_10001469 3300002067 Bacteria 8329
9 JGI24738J21930_10000747 3300002075 Bacteria 9357
10 JGI25150J39212_1000300 3300002774 Bacteria 25280
11 JGI25153J46596_10000196 3300003215 Bacteria 57182
12 rootL2_10279585 3300003322 Bacteria 2214
13 Ga0055526_1001075 3300003771 Bacteria 19957
14 Ga0055537_1004484 3300003773 Bacteria 3983
15 Ga0055537_1004723 3300003773 Bacteria 3826
16 Ga0055524_1003497 3300003775 Bacteria 7604
17 Ga0055536_1011435 3300003781 Bacteria 3405
18 Ga0055528_1003046 3300003790 Bacteria 8629
19 Ga0055528_1003368 3300003790 Bacteria 8064
20 Ga0055540_1002959 3300003792 Bacteria 8532
21 Ga0065165_1000852 3300005262 Bacteria 39980
22 Ga0065165_1015911 3300005262 Bacteria 2845
23 Ga0070690_100004290 3300005330 Bacteria 7897
24 Ga0070670_100018537 3300005331 Bacteria 5971
25 Ga0070677_10011036 3300005333 Bacteria 3105
26 Ga0070682_100035140 3300005337 Bacteria 3057
27 Ga0070660_100080120 3300005339 Bacteria 2562
28 Ga0070687_100001568 3300005343 Bacteria 8123
29 Ga0070687_100086991 3300005343 Bacteria 1719
30 Ga0070675_100021133 3300005354 Bacteria 5198
31 Ga0070671_100016585 3300005355 Bacteria 5955
32 Ga0070671_100076685 3300005355 Bacteria 2793
33 Ga0070674_100001442 3300005356 Bacteria 12656
34 Ga0070674_100010728 3300005356 Bacteria 5554
35 Ga0070674_100047582 3300005356 Bacteria 2940
36 Ga0070674_100076831 3300005356 Bacteria 2375
37 Ga0070673_100024827 3300005364 Bacteria 4400
38 Ga0070673_100055315 3300005364 Bacteria 3126
39 Ga0070673_100062931 3300005364 Bacteria 2950
40 Ga0070700_100093990 3300005441 Bacteria 1962
41 Ga0070663_100000866 3300005455 Bacteria 16443
42 Ga0070678_100025554 3300005456 Bacteria 3976
43 Ga0070662_100011926 3300005457 Bacteria 5746
44 Ga0070672_100005276 3300005543 Bacteria 8548
45 Ga0070672_100010162 3300005543 Bacteria 6517
46 Ga0070686_100072901 3300005544 Bacteria 2253
47 Ga0070696_100026572 3300005546 Bacteria 3938
48 Ga0068855_100045614 3300005563 Bacteria 5184
49 Ga0068857_100019750 3300005577 Bacteria 5918
50 Ga0068856_100018437 3300005614 Bacteria 6765
51 Ga0070702_100066284 3300005615 Bacteria 2117
52 Ga0068864_100008504 3300005618 Bacteria 8468
53 Ga0068861_100003760 3300005719 Bacteria 10127
54 Ga0068851_10008474 3300005834 Bacteria 4754
55 Ga0068870_10021152 3300005840 Bacteria 3178
56 Ga0068863_100005028 3300005841 Bacteria 13038
57 Ga0068863_100037322 3300005841 Bacteria 4626
58 Ga0068863_100078876 3300005841 Bacteria 3119
59 Ga0081455_10000935 3300005937 Bacteria 37321
60 Ga0097621_100083943 3300006237 Bacteria 2655
61 Ga0068871_100025512 3300006358 Bacteria 4600
62 Ga0105251_10012115 3300009011 Bacteria 4894
63 Ga0111539_10144979 3300009094 Bacteria 2780
64 Ga0105242_10121799 3300009176 Bacteria 2240
65 Ga0105237_10133642 3300009545 Bacteria 2476
66 Ga0105249_10075974 3300009553 Bacteria 3112
67 Ga0157373_10019550 3300013100 Bacteria 4926
68 Ga0157373_10082154 3300013100 Bacteria 2271
69 Ga0157375_10018946 3300013308 Bacteria 6248
70 Ga0157375_10029043 3300013308 Bacteria 5195
71 Ga0163163_10100761 3300014325 Bacteria 2910
72 Ga0157380_10014574 3300014326 Bacteria 5755
73 Ga0157380_10016672 3300014326 Bacteria 5423
74 Ga0157376_10032747 3300014969 Bacteria 4176
75 Ga0157376_10038508 3300014969 Bacteria 3891
76 Ga0163161_10034280 3300017792 Bacteria 3631
77 Ga0207425_1000146 3300025245 Bacteria 60712
78 Ga0209129_1003278 3300025258 Bacteria 7164
79 Ga0209565_1000322 3300025263 Bacteria 43098
80 Ga0209565_1001741 3300025263 Bacteria 8876
81 Ga0209673_1000590 3300025273 Bacteria 56779
82 Ga0209673_1010308 3300025273 Bacteria 3945
83 Ga0209675_1011459 3300025291 Bacteria 2940
84 Ga0209676_1021136 3300025292 Bacteria 2193
85 Ga0209025_1000431 3300025294 Bacteria 82934
86 Ga0209564_1000437 3300025295 Bacteria 72058
87 Ga0209564_1012046 3300025295 Bacteria 3808
88 Ga0209758_1000002 3300025297 Bacteria 1400310
89 Ga0209758_1007010 3300025297 Bacteria 7837
90 Ga0209758_1008182 3300025297 Bacteria 6858
91 Ga0209050_1000005 3300025298 Bacteria 1557793
92 Ga0209256_1003381 3300025299 Bacteria 11271
93 Ga0209256_1003889 3300025299 Bacteria 9903
94 Ga0209256_1006428 3300025299 Bacteria 6228
95 Ga0209051_1000212 3300025303 Bacteria 100189
96 Ga0209257_1000753 3300025304 Bacteria 48917
97 Ga0209257_1000761 3300025304 Bacteria 48293
98 Ga0209257_1000925 3300025304 Bacteria 40806
99 Ga0207682_10005487 3300025893 Bacteria 5165
100 Ga0207647_10009893 3300025904 Bacteria 6754
101 Ga0207662_10004168 3300025918 Bacteria 7570
102 Ga0207657_10120660 3300025919 Bacteria 2157
103 Ga0207659_10068601 3300025926 Bacteria 2579
104 Ga0207644_10017881 3300025931 Bacteria 4794
105 Ga0207706_10011815 3300025933 Bacteria 7952
106 Ga0207706_10062354 3300025933 Bacteria 3283
107 Ga0207686_10083748 3300025934 Bacteria 2088
108 Ga0207670_10075351 3300025936 Bacteria 2345
109 Ga0207670_10147006 3300025936 Bacteria 1744
110 Ga0207669_10061897 3300025937 Bacteria 2302
111 Ga0207691_10000807 3300025940 Bacteria 31168
112 Ga0207691_10008250 3300025940 Bacteria 10001
113 Ga0207691_10033475 3300025940 Bacteria 4784
114 Ga0207689_10004937 3300025942 Bacteria 12015
115 Ga0207689_10080384 3300025942 Bacteria 2679
116 Ga0207667_10163433 3300025949 Bacteria 2289
117 Ga0207651_10066621 3300025960 Bacteria 2531
118 Ga0207651_10101760 3300025960 Bacteria 2134
119 Ga0207712_10043874 3300025961 Bacteria 3087
120 Ga0207678_10001806 3300026067 Bacteria 19591
121 Ga0207708_10060054 3300026075 Bacteria 2902
122 Ga0207702_10028431 3300026078 Bacteria 4647
123 Ga0207641_10053176 3300026088 Bacteria 3432
124 Ga0207674_10000410 3300026116 Bacteria 55768
125 Ga0207675_100003733 3300026118 Bacteria 14833
126 Ga0207675_100020000 3300026118 Bacteria 6246
127 Ga0207675_100044673 3300026118 Bacteria 4141
128 Ga0207683_10039223 3300026121 Bacteria 4132
129 Ga0307515_10044339 3300028794 Bacteria 6875
130 Ga0307515_10051997 3300028794 Bacteria 6090
131 Ga0307513_10013992 3300031456 Bacteria 9829
132 Ga0307513_10037295 3300031456 Bacteria 5411
133 Ga0307509_10052044 3300031507 Bacteria 4373
134 Ga0307408_100002602 3300031548 Bacteria 12565
135 Ga0307413_10004733 3300031824 Bacteria 5975
136 Ga0307410_10022111 3300031852 Bacteria 3925
137 Ga0307409_100136576 3300031995 Bacteria 2105
138 Ga0307416_100023136 3300032002 Bacteria 4503
139 Ga0307411_10014576 3300032005 Bacteria 4380
140 Ga0395900_0072918 3300037418 Bacteria 3529
141 Ga0395900_0198194 3300037418 Bacteria 2033
142 Ga0395898_0042475 3300037466 Bacteria 4485
143 Ga0395905_0001302 3300037471 Bacteria 30624
144 Ga0395905_0044582 3300037471 Bacteria 4162
145 Ga0395901_0054224 3300038443 Bacteria 4166
146 Ga0395901_0054246 3300038443 Bacteria 4165
147 Ga0395901_0061929 3300038443 Bacteria 3893
148 Ga0395901_0103619 3300038443 Bacteria 2985
149 Ga0451791_1452695 3300041451 Bacteria 5718
150 Ga0451807_0171029 3300041486 Bacteria 4577
151 Ga0439448_0001741 3300042005 Bacteria 5753
152 Ga0439458_0000773 3300042157 Bacteria 8198
153 Ga0439458_0001676 3300042157 Bacteria 5536
154 Ga0439458_0003617 3300042157 Bacteria 3599
155 Ga0439435_0004585 3300042436 Bacteria 2990
156 Ga0495590_0002884 3300046457 Bacteria 7079
157 Ga0495638_0000660 3300046460 Bacteria 37623
158 Ga0495638_0002258 3300046460 Bacteria 15967
159 Ga0495638_0008436 3300046460 Bacteria 7307
160 Ga0495638_0011923 3300046460 Bacteria 5974
161 Ga0495650_0000024 3300046471 Bacteria 496674
162 Ga0495607_0025472 3300046501 Bacteria 3678
163 Ga0495607_0042624 3300046501 Bacteria 2689
164 Ga0495606_0005007 3300046507 Bacteria 12918
165 Ga0495610_0000375 3300046512 Bacteria 46324
166 Ga0495610_0002127 3300046512 Bacteria 16847
167 Ga0495610_0002794 3300046512 Bacteria 14280
168 Ga0495616_0000053 3300046513 Bacteria 104389
169 Ga0495616_0012604 3300046513 Bacteria 4792
170 Ga0495632_0000335 3300046519 Bacteria 44771
171 Ga0495632_0015698 3300046519 Bacteria 4235
172 Ga0495632_0025458 3300046519 Bacteria 3129
173 Ga0495648_0037959 3300046524 Bacteria 3089
174 Ga0495654_0000026 3300046530 Bacteria 234940
175 Ga0495668_0004945 3300046616 Bacteria 9236
176 Ga0495668_0023665 3300046616 Bacteria 3499
177 Ga0495625_0005204 3300046660 Bacteria 11985
178 Ga0495625_0024380 3300046660 Bacteria 4605
179 Ga0495660_0007597 3300046810 Bacteria 6366
180 Ga0495672_0003635 3300047320 Bacteria 13071
181 Ga0495673_0001981 3300047469 Bacteria 15133
182 Ga0495686_0001315 3300047472 Bacteria 27861
183 Ga0495686_0010238 3300047472 Bacteria 6678
184 Ga0495686_0017359 3300047472 Bacteria 4852
185 Ga0496115_0000666 3300048918 Bacteria 25370
186 Ga0496115_0001424 3300048918 Bacteria 17131
187 Ga0496122_0011282 3300048925 Bacteria 9075
188 Ga0496124_0020095 3300048927 Bacteria 6184
189 Ga0496125_0045026 3300048928 Bacteria 3720
190 Ga0495678_006425 3300049459 Bacteria 6253
191 Ga0501070_0012169 3300049586 Bacteria 7260
192 Ga0501073_0007668 3300049589 Bacteria 8007
193 Ga0501073_0042601 3300049589 Bacteria 3203
194 Ga0501074_0006353 3300049590 Bacteria 8534
195 Ga0501077_0000771 3300049593 Bacteria 19341
196 Ga0501079_0001195 3300049741 Bacteria 18197
197 Ga0501080_0014460 3300049742 Bacteria 7269
198 nmdc:mga08y16_87086_c1 3300050511 Bacteria 3254
199 Ga0500578_0000082 3300053086 Bacteria 105580
200 Ga0500583_0003670 3300053092 Bacteria 4880
201 Ga0500555_004606 3300053103 Bacteria 3913
202 Ga0500556_0001262 3300053104 Bacteria 11608
203 Ga0500594_0000209 3300053118 Bacteria 14427
204 Ga0500595_002698 3300053119 Bacteria 8604
205 Ga0500618_000035 3300053125 Bacteria 120187
206 Ga0500559_0000033 3300053136 Bacteria 112277
207 Ga0500559_0006119 3300053136 Bacteria 5450
208 Ga0500568_0008425 3300053139 Bacteria 4967
209 Ga0500568_0011942 3300053139 Bacteria 4007
210 Ga0500588_0001376 3300053146 Bacteria 4614
211 Ga0500588_0004077 3300053146 Bacteria 3135
212 Ga0500616_0046816 3300053153 Bacteria 2298
213 Ga0500622_0001253 3300053156 Bacteria 20749
214 Ga0500622_0008333 3300053156 Bacteria 5807
215 Ga0500627_0041150 3300053158 Bacteria 1985
216 Ga0500611_010619 3300053727 Bacteria 1498
217 Ga0500645_000047 3300053730 Bacteria 106093
218 Ga0500645_002817 3300053730 Bacteria 7492
219 Ga0501084_0007515 3300054114 Bacteria 8984
220 2585147604 2582581279 Bacteria 4980720
221 2585152890 2582581280 Bacteria 5994497
222 2585195152 2582581293 Bacteria 5907401
223 2643781491 2643221552 Bacteria 5708754
224 2643929030 2643221584 Bacteria 5511711
225 2792461182 2791355048 Bacteria 5832535
226 2843747546 2843744320 Bacteria 5659202
227 2849563348 2849560528 Bacteria 5393480
228 2849576193 2849573788 Bacteria 5421256
229 2851154466 2851153111 Bacteria 5542585
230 2898333820 2898329390 Bacteria 5168154
231 Ga0495625_0008332
232 JGI24736J21556_1000442
233 JGI24741J21665_1000027
234 JGI24740J21852_10022216
235 JGI24739J22299_10031001
236 JGI24737J22298_10000295
237 JGI24737J22298_10000529
238 JGI24735J21928_10001469
239 JGI24738J21930_10000747
240 JGI25150J39212_1000300
241 JGI25153J46596_10000196
242 rootL2_10279585
243 Ga0055526_1001075
244 Ga0055537_1004484
245 Ga0055537_1004723
246 Ga0055524_1003497
247 Ga0055536_1011435
248 Ga0055528_1003046
249 Ga0055528_1003368
250 Ga0055540_1002959
251 Ga0065165_1000852
252 Ga0065165_1015911
253 Ga0070690_100004290
254 Ga0070670_100018537
255 Ga0070677_10011036
256 Ga0070682_100035140
257 Ga0070660_100080120
258 Ga0070687_100001568
259 Ga0070687_100086991
260 Ga0070675_100021133
261 Ga0070671_100016585
262 Ga0070671_100076685
263 Ga0070674_100001442
264 Ga0070674_100010728
265 Ga0070674_100047582
266 Ga0070674_100076831
267 Ga0070673_100024827
268 Ga0070673_100055315
269 Ga0070673_100062931
270 Ga0070700_100093990
271 Ga0070663_100000866
272 Ga0070678_100025554
273 Ga0070662_100011926
274 Ga0070672_100005276
275 Ga0070672_100010162
276 Ga0070686_100072901
277 Ga0070696_100026572
278 Ga0068855_100045614
279 Ga0068857_100019750
280 Ga0068856_100018437
281 Ga0070702_100066284
282 Ga0068864_100008504
283 Ga0068861_100003760
284 Ga0068851_10008474
285 Ga0068870_10021152
286 Ga0068863_100005028
287 Ga0068863_100037322
288 Ga0068863_100078876
289 Ga0081455_10000935
290 Ga0097621_100083943
291 Ga0068871_100025512
292 Ga0105251_10012115
293 Ga0111539_10144979
294 Ga0105242_10121799
295 Ga0105237_10133642
296 Ga0105249_10075974
297 Ga0157373_10019550
298 Ga0157373_10082154
299 Ga0157375_10018946
300 Ga0157375_10029043
301 Ga0163163_10100761
302 Ga0157380_10014574
303 Ga0157380_10016672
304 Ga0157376_10032747
305 Ga0157376_10038508
306 Ga0163161_10034280
307 Ga0207425_1000146
308 Ga0209129_1003278
309 Ga0209565_1000322
310 Ga0209565_1001741
311 Ga0209673_1000590
312 Ga0209673_1010308
313 Ga0209675_1011459
314 Ga0209676_1021136
315 Ga0209025_1000431
316 Ga0209564_1000437
317 Ga0209564_1012046
318 Ga0209758_1000002
319 Ga0209758_1007010
320 Ga0209758_1008182
321 Ga0209050_1000005
322 Ga0209256_1003381
323 Ga0209256_1003889
324 Ga0209256_1006428
325 Ga0209051_1000212
326 Ga0209257_1000753
327 Ga0209257_1000761
328 Ga0209257_1000925
329 Ga0207682_10005487
330 Ga0207647_10009893
331 Ga0207662_10004168
332 Ga0207657_10120660
333 Ga0207659_10068601
334 Ga0207644_10017881
335 Ga0207706_10011815
336 Ga0207706_10062354
337 Ga0207686_10083748
338 Ga0207670_10075351
339 Ga0207670_10147006
340 Ga0207669_10061897
341 Ga0207691_10000807
342 Ga0207691_10008250
343 Ga0207691_10033475
344 Ga0207689_10004937
345 Ga0207689_10080384
346 Ga0207667_10163433
347 Ga0207651_10066621
348 Ga0207651_10101760
349 Ga0207712_10043874
350 Ga0207678_10001806
351 Ga0207708_10060054
352 Ga0207702_10028431
353 Ga0207641_10053176
354 Ga0207674_10000410
355 Ga0207675_100003733
356 Ga0207675_100020000
357 Ga0207675_100044673
358 Ga0207683_10039223
359 Ga0307515_10044339
360 Ga0307515_10051997
361 Ga0307513_10013992
362 Ga0307513_10037295
363 Ga0307509_10052044
364 Ga0307408_100002602
365 Ga0307413_10004733
366 Ga0307410_10022111
367 Ga0307409_100136576
368 Ga0307416_100023136
369 Ga0307411_10014576
370 Ga0395900_0072918
371 Ga0395900_0198194
372 Ga0395898_0042475
373 Ga0395905_0001302
374 Ga0395905_0044582
375 Ga0395901_0054224
376 Ga0395901_0054246
377 Ga0395901_0061929
378 Ga0395901_0103619
379 Ga0451791_1452695
380 Ga0451807_0171029
381 Ga0439448_0001741
382 Ga0439458_0000773
383 Ga0439458_0001676
384 Ga0439458_0003617
385 Ga0439435_0004585
386 Ga0495590_0002884
387 Ga0495638_0000660
388 Ga0495638_0002258
389 Ga0495638_0008436
390 Ga0495638_0011923
391 Ga0495650_0000024
392 Ga0495607_0025472
393 Ga0495607_0042624
394 Ga0495606_0005007
395 Ga0495610_0000375
396 Ga0495610_0002127
397 Ga0495610_0002794
398 Ga0495616_0000053
399 Ga0495616_0012604
400 Ga0495632_0000335
401 Ga0495632_0015698
402 Ga0495632_0025458
403 Ga0495648_0037959
404 Ga0495654_0000026
405 Ga0495668_0004945
406 Ga0495668_0023665
407 Ga0495625_0005204
408 Ga0495625_0024380
409 Ga0495660_0007597
410 Ga0495672_0003635
411 Ga0495673_0001981
412 Ga0495686_0001315
413 Ga0495686_0010238
414 Ga0495686_0017359
415 Ga0496115_0000666
416 Ga0496115_0001424
417 Ga0496122_0011282
418 Ga0496124_0020095
419 Ga0496125_0045026
420 Ga0495678_006425
421 Ga0501070_0012169
422 Ga0501073_0007668
423 Ga0501073_0042601
424 Ga0501074_0006353
425 Ga0501077_0000771
426 Ga0501079_0001195
427 Ga0501080_0014460
428 nmdc:mga08y16_87086_c1
429 Ga0500578_0000082
430 Ga0500583_0003670
431 Ga0500555_004606
432 Ga0500556_0001262
433 Ga0500594_0000209
434 Ga0500595_002698
435 Ga0500618_000035
436 Ga0500559_0000033
437 Ga0500559_0006119
438 Ga0500568_0008425
439 Ga0500568_0011942
440 Ga0500588_0001376
441 Ga0500588_0004077
442 Ga0500616_0046816
443 Ga0500622_0001253
444 Ga0500622_0008333
445 Ga0500627_0041150
446 Ga0500611_010619
447 Ga0500645_000047
448 Ga0500645_002817
449 Ga0501084_0007515
450 2585147604
451 2585152890
452 2585195152
453 2643781491
454 2643929030
455 2792461182
456 2843747546
457 2849563348
458 2849576193
459 2851154466
460 2898333820

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF18120

DUF5597

Domain of unknown function (DUF5597)

415

555

0.94

PF01301

Glyco_hydro_35

Glycosyl hydrolases family 35

58

240

0.73

PF02449

Glyco_hydro_42

Beta-galactosidase

79

273

0.67

Structural Annotation

Top 5 Hits

ID Description Score Start End
8faa-assembly2.cif.gz_J crystal structure of xanthomonas campestris gh35 beta-galactosidase 0.89 9 526
8faa-assembly2.cif.gz_J crystal structure of xanthomonas campestris gh35 beta-galactosidase 0.8866 9 526
7kmn-assembly1.cif.gz_A crystal structure of xac1772, a gh35 xyloglucan-active beta-galactosidase from xanthomonas citri 0.8777 10 527
7kmn-assembly1.cif.gz_A crystal structure of xac1772, a gh35 xyloglucan-active beta-galactosidase from xanthomonas citri 0.8728 10 527
3u7v-assembly1.cif.gz_A the structure of a putative beta-galactosidase from caulobacter crescentus cb15. 0.8655 8 526
ID Description Score Start End Superfamily
3u7vA01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.887 9 382 3.20.20.80
3u7vA01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.88 9 382 3.20.20.80
3u7vA02 Mainly Beta;Sandwich;Chondroitinase Ac; Chain A, domain 3;putative beta-Galactosidase from caulobacter crescentus 0.7867 383 526 2.60.220.20
3u7vA02 Mainly Beta;Sandwich;Chondroitinase Ac; Chain A, domain 3;putative beta-Galactosidase from caulobacter crescentus 0.7659 383 526 2.60.220.20
5jawD02 Mainly Beta;Sandwich;Chondroitinase Ac; Chain A, domain 3;putative beta-Galactosidase from caulobacter crescentus 0.7527 385 527 2.60.220.20
ID Description Score Start End GO Terms
AF-A0A2T9K1G0-F1-model_v4 Beta-galactosidase GanA 0.98 4 527 GO:0016798
AF-A0A3N5DSN8-F1-model_v4 Glycoside hydrolase 35 catalytic domain-containing protein 0.9773 7 293 GO:0004565
GO:0005975
AF-A0A7X7PZS9-F1-model_v4 DUF5597 domain-containing protein 0.974 54 527 GO:0004565
GO:0005975
GO:0009341
AF-A0A2T9K1G0-F1-model_v4 Beta-galactosidase GanA 0.9727 4 527 GO:0016798
AF-A0A6I4SY61-F1-model_v4 Glycoside hydrolase 35 catalytic domain-containing protein 0.9717 8 99

Map