F343163

General Info

Members Datasets Scaffolds Average Seq Length
230 179 194 282

Family's Representative Sequence

Representative Sequence 3300031649|Ga0307514_10119348|Ga0307514_101193483
Length 320
Sequence MDSPAGKTPSTWLTELMTDTETSARTPALTVAVLGTGIMGAAMARNLARSGHVVRVWNRTRAKAEPLAIEGGIMLSETPADAVRDADVVLTMLYDGDAVREVMREAAPALRPGAAWVQSTTAGVDAIGELGVLAGELGLVFFDAPVLGTRQPAEAGQLLVLAAGPAEHRAAVAPVLDAVGARTVWTGAEGGAGSATRLKLVANSWVLAATSATGEVLALAQALGVDPQNFFDAIEGGPLDMGYLRAKAGLILNDRLTPASFAVSTAAKDARLIVEAGERNGVRLDVAAASAERFRRAVEQGHGDEDMAAAYFASFDEKQE

Samples

Sample ID Description Type Environment
1 2554235341 Pseudomonas protegens CHA0 Isolate Rhizosphere
2 2599185160 Pseudomonas sp. NFPP25 Isolate Rhizoplane
3 2599185161 Pseudomonas sp. NFPP09 Isolate Rhizoplane
4 2599185162 Pseudomonas sp. NFPP10 Isolate Rhizoplane
5 2599185163 Pseudomonas sp. NFPP12 Isolate Rhizoplane
6 2599185164 Pseudomonas sp. NFPP13 Isolate Rhizoplane
7 2599185165 Pseudomonas sp. NFPP18 Isolate Rhizoplane
8 2599185166 Pseudomonas sp. NFPP08 Isolate Rhizoplane
9 2599185168 Pseudomonas sp. NFPP05 Isolate Rhizoplane
10 2599185181 Pseudomonas sp. NFPP17 Isolate Rhizoplane
11 2599185182 Pseudomonas sp. NFPP19 Isolate Rhizoplane
12 2599185186 Pseudomonas sp. NFPP15 Isolate Rhizoplane
13 2599185356 Pseudomonas sp. NFPP14 Isolate Rhizoplane
14 2600255313 Pseudomonas sp. NFPP16 Isolate Rhizoplane
15 2667528171 Pseudomonas sp. NFPP22 Isolate Rhizoplane
16 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
17 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
18 2818991464 Pseudomonas protegens 3295 Isolate Rhizosphere
19 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
20 2917070673 Pseudomonas protegens CHA0 Isolate Rhizosphere
21 2935353572 Pseudomonas protegens TECH19 Isolate Unclassified
22 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
23 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
24 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
25 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
26 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
27 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
28 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
29 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
30 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
31 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
32 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
33 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
36 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
37 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
38 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
39 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
47 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
48 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
49 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
50 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
51 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
52 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
53 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
54 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
55 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
56 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
57 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
58 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
65 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
67 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
68 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
69 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
70 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
71 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
72 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
73 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
74 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
75 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
76 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
77 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
78 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
79 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
80 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
81 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
82 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
83 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
84 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
85 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
86 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
87 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
88 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
89 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
90 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
91 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
92 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
93 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
94 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
95 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
96 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
97 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
98 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
99 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
100 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
101 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
102 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
103 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
104 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
105 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
106 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
107 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
108 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
109 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
110 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
111 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
112 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
113 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
114 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
115 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
116 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
117 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
118 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
119 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
120 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
121 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
122 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
123 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
124 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
125 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
126 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
127 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
128 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
129 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
130 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
131 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
132 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
133 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
134 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
135 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
136 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
137 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
138 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
139 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
140 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
151 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
152 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
155 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
156 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
157 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
158 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
159 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
160 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
161 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
162 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
163 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
164 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
165 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
166 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
167 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
168 637000220 Pseudomonas protegens Pf-5 Isolate Rhizoplane
169 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
170 8019769354 Pseudomonas sp. MSSRFD41 Isolate Rhizosphere
171 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
172 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
173 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
174 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
175 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
176 8056054917 Glycomyces luteolus NEAU-A15 Isolate Rhizosphere
177 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
178 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere
179 8057798959 Pseudomonas piscis BW16M1 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 84.35
Metatranscriptomes 0
Isolates 15.65

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.26
Nodule 0
Rhizoplane 11.74
Rhizosphere 67.39
Stem 0
Stem Tuber 0
Unclassified 12.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25162J39368_1000004 3300002737 Bacteria 441040
2 JGI25163J39215_1000020 3300002771 Bacteria 75466
3 JGI25164J39214_1000034 3300002772 Bacteria 139998
4 JGI25165J46597_1000011 3300003214 Bacteria 441040
5 rootH1_10148061 3300003323 Bacteria 1371
6 Ga0070680_100136660 3300005336 Bacteria 2054
7 Ga0070660_100121874 3300005339 Bacteria 2081
8 Ga0070681_10036501 3300005458 Bacteria 4936
9 Ga0070679_100077365 3300005530 Bacteria 3316
10 Ga0068855_100001178 3300005563 Bacteria 32479
11 Ga0068856_100172283 3300005614 Bacteria 2176
12 Ga0081538_10000443 3300005981 Bacteria 46582
13 Ga0081538_10001377 3300005981 Bacteria 24951
14 Ga0075363_100014892 3300006048 Bacteria 3813
15 Ga0075367_10125282 3300006178 Bacteria 1585
16 Ga0075431_100003024 3300006847 Bacteria 16276
17 Ga0075434_100018091 3300006871 Bacteria 6798
18 Ga0105240_10385053 3300009093 Bacteria 1583
19 Ga0111539_10029913 3300009094 Bacteria 6625
20 Ga0105243_10006652 3300009148 Bacteria 8922
21 Ga0105237_10062012 3300009545 Bacteria 3738
22 Ga0105239_10384531 3300010375 Bacteria 1587
23 Ga0157371_10000057 3300013102 Bacteria 171900
24 Ga0163163_10243915 3300014325 Bacteria 1847
25 Ga0182008_10001282 3300014497 Bacteria 17245
26 Ga0182008_10003603 3300014497 Bacteria 9273
27 Ga0182007_10000145 3300015262 Bacteria 47705
28 Ga0183367_1001 3300015688 Bacteria 1225545
29 Ga0213873_10060591 3300021358 Unclassified 1024
30 Ga0213875_10043495 3300021388 Bacteria 2109
31 Ga0209760_100050 3300025207 Bacteria 106788
32 Ga0207427_100003 3300025231 Bacteria 1035004
33 Ga0209437_100002 3300025233 Bacteria 1574801
34 Ga0209233_1000004 3300025261 Bacteria 1574798
35 Ga0207426_1018675 3300025302 Bacteria 2439
36 Ga0207707_10091849 3300025912 Bacteria 2653
37 Ga0207695_10046686 3300025913 Bacteria 4589
38 Ga0207660_10136439 3300025917 Bacteria 1872
39 Ga0207657_10087952 3300025919 Bacteria 2598
40 Ga0207709_10001577 3300025935 Bacteria 15591
41 Ga0207667_10007278 3300025949 Bacteria 13345
42 Ga0207428_10043302 3300027907 Bacteria 3636
43 Ga0268266_10285061 3300028379 Bacteria 1537
44 Ga0307515_10010241 3300028794 Bacteria 18001
45 Ga0307515_10032040 3300028794 Bacteria 8729
46 Ga0307512_10003434 3300030522 Bacteria 18464
47 Ga0307512_10016942 3300030522 Bacteria 6710
48 Ga0307512_10114246 3300030522 Bacteria 1763
49 Ga0307513_10000003 3300031456 Bacteria 590921
50 Ga0307513_10034101 3300031456 Bacteria 5715
51 Ga0307513_10043036 3300031456 Bacteria 4965
52 Ga0307508_10003413 3300031616 Bacteria 16071
53 Ga0307508_10004366 3300031616 Bacteria 13825
54 Ga0307514_10119348 3300031649 Bacteria 1844
55 Ga0307516_10020013 3300031730 Bacteria 6920
56 Ga0307516_10047940 3300031730 Bacteria 4206
57 Ga0307415_100153002 3300032126 Bacteria 1778
58 Ga0307510_10008348 3300033180 Bacteria 12345
59 Ga0395899_0042068 3300037312 Bacteria 3412
60 Ga0395899_0143281 3300037312 Bacteria 1699
61 Ga0395900_0044592 3300037418 Bacteria 4568
62 Ga0395898_0015691 3300037466 Bacteria 7762
63 Ga0395898_0062996 3300037466 Bacteria 3600
64 Ga0395898_0158736 3300037466 Bacteria 2163
65 Ga0395898_0216232 3300037466 Bacteria 1828
66 Ga0395905_0168347 3300037471 Bacteria 2059
67 Ga0395905_0228248 3300037471 Bacteria 1741
68 Ga0436364_1496294 3300037853 Bacteria 10265
69 Ga0395901_0258084 3300038443 Bacteria 1814
70 Ga0395901_0438469 3300038443 Bacteria 1337
71 Ga0436365_0128836 3300039437 Bacteria 8744
72 Ga0436362_1037016 3300039453 Bacteria 1140
73 Ga0439436_0005564 3300041404 Bacteria 3862
74 Ga0439438_028676 3300041405 Bacteria 1496
75 Ga0439439_0010426 3300041406 Bacteria 2221
76 Ga0451853_2575960 3300041512 Bacteria 4868
77 Ga0439449_0000605 3300042007 Bacteria 13498
78 Ga0439449_0002121 3300042007 Bacteria 7788
79 Ga0439457_005019 3300042014 Bacteria 3381
80 Ga0466969_0044578 3300044656 Bacteria 2205
81 Ga0466972_0006426 3300044658 Bacteria 5903
82 Ga0466972_0017919 3300044658 Bacteria 3542
83 Ga0466972_0119554 3300044658 Bacteria 1243
84 Ga0466965_0007807 3300044683 Bacteria 4929
85 Ga0466966_0008912 3300044684 Bacteria 6646
86 Ga0466966_0025238 3300044684 Bacteria 3883
87 Ga0466961_0013616 3300044693 Bacteria 5210
88 Ga0466963_0006424 3300044694 Bacteria 6953
89 Ga0466963_0047322 3300044694 Bacteria 2838
90 Ga0466963_0053712 3300044694 Bacteria 2676
91 Ga0466964_0025534 3300044706 Bacteria 2307
92 Ga0466971_0000431 3300044719 Bacteria 16386
93 Ga0466971_0013029 3300044719 Bacteria 3648
94 Ga0466971_0014154 3300044719 Bacteria 3507
95 Ga0466971_0056634 3300044719 Bacteria 1768
96 Ga0466968_0002947 3300044735 Bacteria 6291
97 Ga0466968_0057676 3300044735 Bacteria 1670
98 Ga0466970_0003099 3300044765 Bacteria 8066
99 Ga0466970_0043347 3300044765 Bacteria 2394
100 Ga0466957_0000336 3300044842 Bacteria 22986
101 Ga0466957_0112283 3300044842 Bacteria 1729
102 Ga0466957_0120650 3300044842 Bacteria 1671
103 Ga0466960_0014876 3300044901 Bacteria 3343
104 Ga0466960_0036034 3300044901 Bacteria 2315
105 Ga0466960_0097544 3300044901 Bacteria 1508
106 Ga0466960_0248181 3300044901 Bacteria 988
107 Ga0466959_0000882 3300045049 Bacteria 17697
108 Ga0466959_0018644 3300045049 Bacteria 5096
109 Ga0466959_0100794 3300045049 Bacteria 2067
110 Ga0466958_0018375 3300045836 Bacteria 4057
111 Ga0466958_0030414 3300045836 Bacteria 3207
112 Ga0466958_0052348 3300045836 Bacteria 2474
113 Ga0466967_0009176 3300045976 Bacteria 7318
114 Ga0466967_0085531 3300045976 Bacteria 2855
115 Ga0466967_0300477 3300045976 Unclassified 1544
116 Ga0495592_0047553 3300046454 Bacteria 3194
117 Ga0495603_0016478 3300046455 Bacteria 4471
118 Ga0495653_0015983 3300046463 Bacteria 6116
119 Ga0495662_0005498 3300046476 Bacteria 6342
120 Ga0495664_0073841 3300046477 Bacteria 2039
121 Ga0495608_0001300 3300046511 Bacteria 17772
122 Ga0495618_0132878 3300046514 Bacteria 1592
123 Ga0495628_0002843 3300046516 Bacteria 15518
124 Ga0495630_0363090 3300046517 Bacteria 1108
125 Ga0495666_0012093 3300046526 Bacteria 4307
126 Ga0495587_0018721 3300046536 Bacteria 4293
127 Ga0495645_0001899 3300046543 Bacteria 14200
128 Ga0495667_0003224 3300046559 Bacteria 10936
129 Ga0495634_0241247 3300046642 Bacteria 1108
130 Ga0495635_0041106 3300046663 Bacteria 3194
131 Ga0495657_0005085 3300046675 Bacteria 10446
132 Ga0495623_0008731 3300046679 Bacteria 6579
133 Ga0495646_0018783 3300046680 Bacteria 4378
134 Ga0495613_0005147 3300046689 Bacteria 9814
135 Ga0495604_0000890 3300047317 Bacteria 24866
136 Ga0495676_0005829 3300047321 Bacteria 11306
137 Ga0495675_0023546 3300047444 Bacteria 3923
138 Ga0495684_0007637 3300047471 Bacteria 8366
139 Ga0495602_0052096 3300048088 Bacteria 3638
140 Ga0496108_0077595 3300048911 Bacteria 2810
141 Ga0496108_0281318 3300048911 Bacteria 1448
142 Ga0496109_0020051 3300048912 Bacteria 5905
143 Ga0496109_0036796 3300048912 Bacteria 4419
144 Ga0496110_0043299 3300048913 Bacteria 3931
145 Ga0496110_0312500 3300048913 Bacteria 1431
146 Ga0496111_0306965 3300048914 Bacteria 1176
147 Ga0496112_0224102 3300048915 Bacteria 1836
148 Ga0496112_0405220 3300048915 Bacteria 1303
149 Ga0496113_0026502 3300048916 Bacteria 4145
150 Ga0496114_0115550 3300048917 Bacteria 2302
151 Ga0496116_0000038 3300048919 Bacteria 370217
152 Ga0496117_0001298 3300048920 Bacteria 36782
153 Ga0496121_0000117 3300048924 Bacteria 176263
154 Ga0496122_0000540 3300048925 Bacteria 78333
155 Ga0496123_0000319 3300048926 Bacteria 91891
156 Ga0496126_0267626 3300048929 Bacteria 1419
157 Ga0501031_0078006 3300049568 Bacteria 2158
158 Ga0501032_0004518 3300049569 Bacteria 10466
159 Ga0501032_0031104 3300049569 Bacteria 3660
160 Ga0501033_0006266 3300049570 Bacteria 9324
161 Ga0501034_0077769 3300049571 Bacteria 3323
162 Ga0501034_0232646 3300049571 Bacteria 1791
163 Ga0501036_0054475 3300049572 Bacteria 3388
164 Ga0501036_0099640 3300049572 Bacteria 2457
165 Ga0501037_0018887 3300049573 Bacteria 5081
166 Ga0501038_0051448 3300049574 Bacteria 3554
167 Ga0501039_0030471 3300049575 Bacteria 4160
168 Ga0501043_0035264 3300049579 Bacteria 3934
169 Ga0501043_0042410 3300049579 Bacteria 3576
170 Ga0501043_0125272 3300049579 Bacteria 2014
171 Ga0501047_0348246 3300049581 Bacteria 1318
172 Ga0501047_0390761 3300049581 Bacteria 1224
173 Ga0501068_0053904 3300049584 Bacteria 2436
174 Ga0501070_0004008 3300049586 Bacteria 12659
175 Ga0501035_0017606 3300049822 Bacteria 6592
176 Ga0501035_0037920 3300049822 Bacteria 4363
177 Ga0501044_0022369 3300049823 Bacteria 6738
178 Ga0501044_0061782 3300049823 Bacteria 3831
179 Ga0501044_0192640 3300049823 Bacteria 2000
180 Ga0501045_0060384 3300049824 Bacteria 2779
181 nmdc:mga03n38_2152_c1 3300050490 Bacteria 5991
182 nmdc:mga06z11_1797_c1 3300050494 Bacteria 8072
183 nmdc:mga04h51_42859_c1 3300050495 Bacteria 1486
184 nmdc:mga06r32_94301_c1 3300050510 Bacteria 2929
185 nmdc:mga08y16_68947_c1 3300050511 Bacteria 3687
186 nmdc:mga0a205_63478_c1 3300050515 Bacteria 2954
187 Ga0495619_0027116 3300053085 Bacteria 3690
188 Ga0500644_0014802 3300053088 Bacteria 2210
189 Ga0500650_0045410 3300053098 Bacteria 2035
190 Ga0500594_0003364 3300053118 Bacteria 3506
191 Ga0500577_0012272 3300053142 Bacteria 2583
192 Ga0500600_0098042 3300053149 Bacteria 1551
193 Ga0466962_0003037 3300061719 Bacteria 8003
194 Ga0466962_0043636 3300061719 Bacteria 2145

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300044694 Ga0466963_0047322 Ga0466963_0047322_54_845 238
2 3300044842 Ga0466957_0120650 Ga0466957_0120650_856_1647 238
3 3300045976 Ga0466967_0085531 Ga0466967_0085531_60_851 238
4 3300044765 Ga0466970_0043347 Ga0466970_0043347_953_1798 246
5 3300009093 Ga0105240_10385053 Ga0105240_103850531 247
6 3300025913 Ga0207695_10046686 Ga0207695_100466865 247
7 3300030522 Ga0307512_10114246 Ga0307512_101142462 249
8 3300003323 rootH1_10148061 rootH1_101480612 250
9 3300044658 Ga0466972_0006426 Ga0466972_0006426_4801_5646 250
10 3300044683 Ga0466965_0007807 Ga0466965_0007807_1258_2103 250
11 3300044706 Ga0466964_0025534 Ga0466964_0025534_183_1028 250
12 3300044719 Ga0466971_0014154 Ga0466971_0014154_647_1492 250
13 3300044842 Ga0466957_0112283 Ga0466957_0112283_644_1489 250
14 3300044901 Ga0466960_0036034 Ga0466960_0036034_1092_1937 250
15 3300045836 Ga0466958_0030414 Ga0466958_0030414_1183_2028 250
16 3300042007 Ga0439449_0000605 Ga0439449_0000605_6152_7048 251
17 3300028794 Ga0307515_10010241 Ga0307515_100102414 254
18 3300030522 Ga0307512_10003434 Ga0307512_100034341 254
19 3300031456 Ga0307513_10034101 Ga0307513_100341012 254
20 3300031616 Ga0307508_10003413 Ga0307508_1000341312 254
21 3300044735 Ga0466968_0057676 Ga0466968_0057676_402_1259 254
22 3300053098 Ga0500650_0045410 Ga0500650_0045410_302_1183 254
23 3300053118 Ga0500594_0003364 Ga0500594_0003364_399_1280 254
24 3300006048 Ga0075363_100014892 Ga0075363_1000148922 255
25 3300031456 Ga0307513_10000003 Ga0307513_100000035 255
26 3300050490 nmdc:mga03n38_2152_c1 nmdc:mga03n38_2152_c1_3714_4595 255
27 3300005981 Ga0081538_10001377 Ga0081538_100013779 256
28 3300044901 Ga0466960_0248181 Ga0466960_0248181_104_952 259
29 3300049579 Ga0501043_0125272 Ga0501043_0125272_782_1678 259
30 3300049581 Ga0501047_0348246 Ga0501047_0348246_234_1130 259
31 3300049822 Ga0501035_0037920 Ga0501035_0037920_1426_2322 259
32 3300049823 Ga0501044_0192640 Ga0501044_0192640_643_1539 259
33 3300031730 Ga0307516_10020013 Ga0307516_100200132 261
34 3300053149 Ga0500600_0098042 Ga0500600_0098042_283_1164 261
35 3300005336 Ga0070680_100136660 Ga0070680_1001366602 264
36 3300005339 Ga0070660_100121874 Ga0070660_1001218742 264
37 3300005458 Ga0070681_10036501 Ga0070681_100365015 264
38 3300005530 Ga0070679_100077365 Ga0070679_1000773653 264
39 3300025912 Ga0207707_10091849 Ga0207707_100918493 264
40 3300025919 Ga0207657_10087952 Ga0207657_100879522 264
41 3300021388 Ga0213875_10043495 Ga0213875_100434952 265
42 3300025917 Ga0207660_10136439 Ga0207660_101364391 265
43 3300031730 Ga0307516_10047940 Ga0307516_100479403 265
44 3300037853 Ga0436364_1496294 Ga0436364_1496294_3587_4462 265
45 3300053088 Ga0500644_0014802 Ga0500644_0014802_871_1686 265
46 3300044901 Ga0466960_0097544 Ga0466960_0097544_35_913 266
47 3300032126 Ga0307415_100153002 Ga0307415_1001530022 267
48 3300044694 Ga0466963_0053712 Ga0466963_0053712_156_968 267
49 3300014325 Ga0163163_10243915 Ga0163163_102439152 269
50 3300048911 Ga0496108_0281318 Ga0496108_0281318_396_1220 269
51 3300048913 Ga0496110_0043299 Ga0496110_0043299_2642_3466 269
52 3300048915 Ga0496112_0405220 Ga0496112_0405220_133_957 269
53 3300045976 Ga0466967_0300477 Ga0466967_0300477_11_835 270
54 3300046454 Ga0495592_0047553 Ga0495592_0047553_2327_3157 270
55 3300046463 Ga0495653_0015983 Ga0495653_0015983_3088_3918 270
56 3300046476 Ga0495662_0005498 Ga0495662_0005498_4843_5673 270
57 3300046477 Ga0495664_0073841 Ga0495664_0073841_113_943 270
58 3300046511 Ga0495608_0001300 Ga0495608_0001300_10604_11434 270
59 3300046514 Ga0495618_0132878 Ga0495618_0132878_412_1242 270
60 3300046516 Ga0495628_0002843 Ga0495628_0002843_7385_8215 270
61 3300046517 Ga0495630_0363090 Ga0495630_0363090_241_1071 270
62 3300046526 Ga0495666_0012093 Ga0495666_0012093_1564_2394 270
63 3300046536 Ga0495587_0018721 Ga0495587_0018721_2199_3029 270
64 3300046543 Ga0495645_0001899 Ga0495645_0001899_9999_10829 270
65 3300046559 Ga0495667_0003224 Ga0495667_0003224_4061_4891 270
66 3300046642 Ga0495634_0241247 Ga0495634_0241247_241_1071 270
67 3300046663 Ga0495635_0041106 Ga0495635_0041106_38_868 270
68 3300046675 Ga0495657_0005085 Ga0495657_0005085_4838_5668 270
69 3300046679 Ga0495623_0008731 Ga0495623_0008731_894_1724 270
70 3300046680 Ga0495646_0018783 Ga0495646_0018783_1328_2158 270
71 3300046689 Ga0495613_0005147 Ga0495613_0005147_4779_5609 270
72 3300047317 Ga0495604_0000890 Ga0495604_0000890_17093_17923 270
73 3300047444 Ga0495675_0023546 Ga0495675_0023546_895_1725 270
74 3300047471 Ga0495684_0007637 Ga0495684_0007637_1070_1900 270
75 3300048088 Ga0495602_0052096 Ga0495602_0052096_1544_2374 270
76 3300053085 Ga0495619_0027116 Ga0495619_0027116_958_1788 270
77 3300005981 Ga0081538_10000443 Ga0081538_100004432 272
78 3300038443 Ga0395901_0438469 Ga0395901_0438469_44_919 273
79 3300037312 Ga0395899_0143281 Ga0395899_0143281_442_1317 274
80 3300037466 Ga0395898_0158736 Ga0395898_0158736_847_1722 274
81 3300037471 Ga0395905_0168347 Ga0395905_0168347_587_1462 274
82 3300006847 Ga0075431_100003024 Ga0075431_1000030248 275
83 3300006871 Ga0075434_100018091 Ga0075434_1000180914 275
84 3300009094 Ga0111539_10029913 Ga0111539_100299134 275
85 3300027907 Ga0207428_10043302 Ga0207428_100433022 275
86 3300050510 nmdc:mga06r32_94301_c1 nmdc:mga06r32_94301_c1_1325_2227 275
87 3300050511 nmdc:mga08y16_68947_c1 nmdc:mga08y16_68947_c1_1681_2583 275
88 3300050515 nmdc:mga0a205_63478_c1 nmdc:mga0a205_63478_c1_1979_2881 275
89 3300015688 Ga0183367_1001 Ga0183367_1001179 276
90 3300028794 Ga0307515_10032040 Ga0307515_100320403 276
91 3300030522 Ga0307512_10016942 Ga0307512_100169422 276
92 3300031456 Ga0307513_10043036 Ga0307513_100430362 276
93 3300053142 Ga0500577_0012272 Ga0500577_0012272_1688_2536 276
94 3300005563 Ga0068855_100001178 Ga0068855_1000011782 277
95 3300005614 Ga0068856_100172283 Ga0068856_1001722833 277
96 3300009545 Ga0105237_10062012 Ga0105237_100620125 277
97 3300010375 Ga0105239_10384531 Ga0105239_103845312 277
98 3300025949 Ga0207667_10007278 Ga0207667_1000727814 277
99 3300044658 Ga0466972_0119554 Ga0466972_0119554_302_1138 277
100 3300044656 Ga0466969_0044578 Ga0466969_0044578_913_1767 279
101 3300044684 Ga0466966_0025238 Ga0466966_0025238_589_1443 279
102 3300044719 Ga0466971_0013029 Ga0466971_0013029_41_895 279
103 3300045049 Ga0466959_0018644 Ga0466959_0018644_2906_3760 279
104 3300045836 Ga0466958_0052348 Ga0466958_0052348_1330_2184 279
105 3300048917 Ga0496114_0115550 Ga0496114_0115550_617_1480 279
106 3300061719 Ga0466962_0043636 Ga0466962_0043636_588_1442 279
107 iso_pu_bacteria 2862281513 2862284009 280
108 iso_pu_bacteria 8056054917 8056059541 280
109 3300044901 Ga0466960_0014876 Ga0466960_0014876_1888_2748 281
110 iso_pu_bacteria 2791355406 2793979930 281
111 iso_pu_bacteria 2808606359 2808847088 281
112 iso_pu_bacteria 2946072368 2946073442 281
113 iso_pu_bacteria 8008574985 8008581636 281
114 iso_pu_bacteria 8047893842 8047899220 281
115 iso_pu_bacteria 8048127548 8048129453 281
116 iso_pu_bacteria 8048356638 8048359699 281
117 iso_pu_bacteria 8048369669 8048376182 281
118 iso_pu_bacteria 8048379754 8048385241 281
119 iso_pu_bacteria 8056447290 8056449443 281
120 iso_pu_bacteria 8056829672 8056833730 281
121 3300037312 Ga0395899_0042068 Ga0395899_0042068_1851_2717 282
122 3300037418 Ga0395900_0044592 Ga0395900_0044592_3129_3995 282
123 3300037466 Ga0395898_0015691 Ga0395898_0015691_6366_7232 282
124 3300037466 Ga0395898_0062996 Ga0395898_0062996_379_1245 282
125 3300037471 Ga0395905_0228248 Ga0395905_0228248_175_1041 282
126 3300038443 Ga0395901_0258084 Ga0395901_0258084_166_1032 282
127 3300048912 Ga0496109_0036796 Ga0496109_0036796_664_1530 282
128 3300048913 Ga0496110_0312500 Ga0496110_0312500_205_1089 282
129 3300048914 Ga0496111_0306965 Ga0496111_0306965_199_1083 282
130 3300048916 Ga0496113_0026502 Ga0496113_0026502_417_1283 282
131 iso_pu_bacteria 2554235341 2555669916 282
132 iso_pu_bacteria 2599185160 2599353057 282
133 iso_pu_bacteria 2599185161 2599359416 282
134 iso_pu_bacteria 2599185162 2599365063 282
135 iso_pu_bacteria 2599185163 2599372110 282
136 iso_pu_bacteria 2599185164 2599378165 282
137 iso_pu_bacteria 2599185165 2599384458 282
138 iso_pu_bacteria 2599185166 2599390968 282
139 iso_pu_bacteria 2599185168 2599403153 282
140 iso_pu_bacteria 2599185181 2599459891 282
141 iso_pu_bacteria 2599185182 2599465750 282
142 iso_pu_bacteria 2599185186 2599488912 282
143 iso_pu_bacteria 2599185356 2600212498 282
144 iso_pu_bacteria 2600255313 2601772666 282
145 iso_pu_bacteria 2667528171 2671095345 282
146 iso_pu_bacteria 2818991464 2819701177 282
147 iso_pu_bacteria 2917070673 2917073736 282
148 iso_pu_bacteria 2935353572 2935357239 282
149 iso_pu_bacteria 3006393351 3006393399 282
150 iso_pu_bacteria 637000220 637320267 282
151 iso_pu_bacteria 8019769354 8019771976 282
152 iso_pu_bacteria 8057798959 8057800260 282
153 3300039437 Ga0436365_0128836 Ga0436365_0128836_2268_3143 283
154 3300044719 Ga0466971_0056634 Ga0466971_0056634_417_1295 283
155 3300044735 Ga0466968_0002947 Ga0466968_0002947_5299_6177 283
156 3300045049 Ga0466959_0100794 Ga0466959_0100794_562_1440 283
157 3300048912 Ga0496109_0020051 Ga0496109_0020051_664_1533 283
158 3300048929 Ga0496126_0267626 Ga0496126_0267626_243_1109 283
159 3300061719 Ga0466962_0003037 Ga0466962_0003037_3093_3971 283
160 3300021358 Ga0213873_10060591 Ga0213873_100605912 284
161 3300039453 Ga0436362_1037016 Ga0436362_1037016_70_951 284
162 3300041404 Ga0439436_0005564 Ga0439436_0005564_683_1558 284
163 3300041405 Ga0439438_028676 Ga0439438_028676_519_1394 284
164 3300041406 Ga0439439_0010426 Ga0439439_0010426_1014_1889 284
165 3300042007 Ga0439449_0002121 Ga0439449_0002121_887_1762 284
166 3300042014 Ga0439457_005019 Ga0439457_005019_1014_1889 284
167 3300048915 Ga0496112_0224102 Ga0496112_0224102_876_1748 284
168 3300049568 Ga0501031_0078006 Ga0501031_0078006_756_1628 284
169 3300049569 Ga0501032_0004518 Ga0501032_0004518_5020_5892 284
170 3300049569 Ga0501032_0031104 Ga0501032_0031104_2212_3084 284
171 3300049570 Ga0501033_0006266 Ga0501033_0006266_4501_5373 284
172 3300049571 Ga0501034_0077769 Ga0501034_0077769_1382_2254 284
173 3300049571 Ga0501034_0232646 Ga0501034_0232646_694_1566 284
174 3300049572 Ga0501036_0054475 Ga0501036_0054475_368_1240 284
175 3300049572 Ga0501036_0099640 Ga0501036_0099640_544_1416 284
176 3300049573 Ga0501037_0018887 Ga0501037_0018887_3080_3952 284
177 3300049574 Ga0501038_0051448 Ga0501038_0051448_571_1443 284
178 3300049575 Ga0501039_0030471 Ga0501039_0030471_1620_2492 284
179 3300049579 Ga0501043_0035264 Ga0501043_0035264_1994_2866 284
180 3300049579 Ga0501043_0042410 Ga0501043_0042410_715_1587 284
181 3300049581 Ga0501047_0390761 Ga0501047_0390761_155_1027 284
182 3300049584 Ga0501068_0053904 Ga0501068_0053904_1290_2162 284
183 3300049586 Ga0501070_0004008 Ga0501070_0004008_3099_3971 284
184 3300049822 Ga0501035_0017606 Ga0501035_0017606_5149_6021 284
185 3300049823 Ga0501044_0022369 Ga0501044_0022369_5149_6021 284
186 3300049823 Ga0501044_0061782 Ga0501044_0061782_354_1226 284
187 3300049824 Ga0501045_0060384 Ga0501045_0060384_1395_2267 284
188 3300006178 Ga0075367_10125282 Ga0075367_101252822 285
189 3300014497 Ga0182008_10001282 Ga0182008_100012824 285
190 3300015262 Ga0182007_10000145 Ga0182007_1000014514 285
191 3300025302 Ga0207426_1018675 Ga0207426_10186751 285
192 3300028379 Ga0268266_10285061 Ga0268266_102850611 285
193 3300031616 Ga0307508_10004366 Ga0307508_1000436615 285
194 3300033180 Ga0307510_10008348 Ga0307510_100083486 285
195 3300037466 Ga0395898_0216232 Ga0395898_0216232_60_956 285
196 3300044658 Ga0466972_0017919 Ga0466972_0017919_1660_2571 285
197 3300044684 Ga0466966_0008912 Ga0466966_0008912_1343_2254 285
198 3300044693 Ga0466961_0013616 Ga0466961_0013616_364_1275 285
199 3300044694 Ga0466963_0006424 Ga0466963_0006424_4642_5553 285
200 3300044719 Ga0466971_0000431 Ga0466971_0000431_13263_14174 285
201 3300044765 Ga0466970_0003099 Ga0466970_0003099_3089_4000 285
202 3300044842 Ga0466957_0000336 Ga0466957_0000336_18013_18924 285
203 3300045049 Ga0466959_0000882 Ga0466959_0000882_11429_12340 285
204 3300045836 Ga0466958_0018375 Ga0466958_0018375_1687_2598 285
205 3300045976 Ga0466967_0009176 Ga0466967_0009176_6044_6955 285
206 3300046455 Ga0495603_0016478 Ga0495603_0016478_2194_3081 285
207 3300047321 Ga0495676_0005829 Ga0495676_0005829_8229_9116 285
208 3300048911 Ga0496108_0077595 Ga0496108_0077595_909_1844 285
209 3300050494 nmdc:mga06z11_1797_c1 nmdc:mga06z11_1797_c1_7046_7936 285
210 3300050495 nmdc:mga04h51_42859_c1 nmdc:mga04h51_42859_c1_184_1074 285
211 iso_pu_bacteria 2954002825 2954007027 285
212 3300002737 JGI25162J39368_1000004 JGI25162J39368_1000004211 286
213 3300002771 JGI25163J39215_1000020 JGI25163J39215_100002025 286
214 3300002772 JGI25164J39214_1000034 JGI25164J39214_100003478 286
215 3300003214 JGI25165J46597_1000011 JGI25165J46597_1000011211 286
216 3300009148 Ga0105243_10006652 Ga0105243_100066527 286
217 3300013102 Ga0157371_10000057 Ga0157371_10000057123 286
218 3300014497 Ga0182008_10003603 Ga0182008_100036039 286
219 3300025207 Ga0209760_100050 Ga0209760_10005010 286
220 3300025231 Ga0207427_100003 Ga0207427_100003210 286
221 3300025233 Ga0209437_100002 Ga0209437_100002803 286
222 3300025261 Ga0209233_1000004 Ga0209233_1000004622 286
223 3300025935 Ga0207709_10001577 Ga0207709_1000157711 286
224 3300031649 Ga0307514_10119348 Ga0307514_101193483 286
225 3300041512 Ga0451853_2575960 Ga0451853_2575960_82_996 286
226 3300048919 Ga0496116_0000038 Ga0496116_0000038_219611_220471 286
227 3300048920 Ga0496117_0001298 Ga0496117_0001298_6458_7318 286
228 3300048924 Ga0496121_0000117 Ga0496121_0000117_30026_30886 286
229 3300048925 Ga0496122_0000540 Ga0496122_0000540_29747_30607 286
230 3300048926 Ga0496123_0000319 Ga0496123_0000319_20045_20905 286

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03446

NAD_binding_2

NAD binding domain of 6-phosphogluconate dehydrogenase

30

187

0.97

PF14833

NAD_binding_11

NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase

191

313

0.95

PF03807

F420_oxidored

NADP oxidoreductase coenzyme F420-dependent

30

117

0.88

PF07991

IlvN

Acetohydroxy acid isomeroreductase, NADPH-binding domain

27

124

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
4j36-assembly1.cif.gz_A cocrystal structure of kynurenine 3-monooxygenase in complex with upf 648 inhibitor(kmo-394upf) 0.9873 7 35
4j34-assembly1.cif.gz_A crystal structure of kynurenine 3-monooxygenase - truncated at position 394 plus his tag cleaved. 0.9851 7 35
6pvi-assembly1.cif.gz_A crystal structure of phqk in complex with paraherquamide l 0.9842 7 37
4j33-assembly2.cif.gz_B crystal structure of kynurenine 3-monooxygenase (kmo-394) 0.9795 6 35
7kpt-assembly1.cif.gz_A crystal structure of ctde in complex with fad and substrate 4 0.9785 7 37
ID Description Score Start End Superfamily
4j36B00 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9814 6 34 3.50.50.60
af_Q5RKN4_340_462_1.10.1040.10 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.97 167 285 1.10.1040.10
af_F6P928_26_379_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.967 8 34 3.50.50.60
5y8iB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9667 6 163 3.40.50.720
af_Q54US8_49_419_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9643 8 34 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A250VU46-F1-model_v4 Dehydrogenase 0.9886 3 117 GO:0050661
AF-A0A3N1CS90-F1-model_v4 3-hydroxyisobutyrate dehydrogenase 0.9876 7 285 GO:0016054
GO:0016491
GO:0050661
GO:0051287
AF-A0A0Q5QJQ3-F1-model_v4 3-hydroxyisobutyrate dehydrogenase 0.9847 7 284 GO:0016054
GO:0016491
GO:0050661
GO:0051287
AF-A0A7K2NUV3-F1-model_v4 NAD(P)-dependent oxidoreductase 0.9843 66 165 GO:0050661
AF-A0A7W0XA06-F1-model_v4 NAD(P)-binding domain-containing protein 0.9837 8 140 GO:0050661

Feature Viewer

pLDDT pTM Quality
95.24 0.9 High
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Predicted Structure (AlphaFold2)

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