F342495

General Info

Members Datasets Scaffolds Average Seq Length
229 178 458 231

Family's Representative Sequence

Representative Sequence 3300053108|Ga0500562_019171|Ga0500562_019171_524_1210
Length 228
Sequence MSQPNSPFSDAAAIGNYAERTARLVPGVHDLQKMAAVLVAESSPGPARVLVIGAGGGMELKALAQALPQAHLVGIDPSKPMLDLAATELGPLTARVEFHHGYTETAPLGPFDAATCLLTMHFLNVEERRATLKEIHRRLKPGATMVMAHLSFPQEPEEERQLWLSRYVAFAAASGVDAESVRKAASTIASTLTLLGPEQEEAMLEATGFKKPRLFYAGLAFRGWVAQA

Samples

Sample ID Description Type Environment
1 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
6 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
7 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
16 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
19 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
20 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
21 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
34 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
35 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
36 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
37 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
38 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
39 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
40 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
41 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
42 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
45 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
47 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
48 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
51 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
52 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
53 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
54 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
55 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
56 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
57 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
58 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
59 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
60 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
61 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
62 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
63 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
64 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
91 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
94 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
95 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
96 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
97 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
98 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
99 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
100 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
101 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
102 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
103 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
104 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
105 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
106 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
107 3300041441 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_1 MetaG Metagenome Rhizoplane
108 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
109 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
110 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
111 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
112 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
113 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
114 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
115 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
116 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
117 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
118 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
119 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
120 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
121 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
122 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
123 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
124 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
125 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
129 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
130 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
131 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
132 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
134 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
135 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
136 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
137 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
138 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
139 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
140 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
141 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
142 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
143 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
144 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
145 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
146 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
147 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
148 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
149 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
150 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
151 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
152 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
153 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
154 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
155 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
156 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
157 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
158 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
159 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
160 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
161 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
162 2511231027 Phyllobacterium sp. YR531 Isolate Rhizosphere
163 2687453257 Planctomyces sp. SH-PL62 Isolate Unclassified
164 2721755755 Bradyrhizobium icense LMTR 13 Isolate Nodule
165 2791355199
166 2837678835 Jiella endophytica CBS5Q-3 Isolate Unclassified
167 2842871566 Phyllobacterium sp. R-73111 Isolate Unclassified
168 2874604998 Bradyrhizobium sp. LMTR 3 Isolate Nodule
169 2876808645 Bradyrhizobium algeriense RST89 Isolate Unclassified
170 2879110137 Bradyrhizobium algeriense RST91 Isolate Nodule
171 2894414249 Luteimonas sp. LNNU 24178 Isolate Rhizosphere
172 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
173 2928521798 Phyllobacterium ifriqiyense 1451 Isolate Rhizosphere
174 2945984333 Variovorax sp. W2I14 Isolate Rhizosphere
175 2954011201 Phyllobacterium ifrigiyense W4I11 Isolate Rhizosphere
176 2995948881 Lysobacter enzymogenes B25 Isolate Unclassified
177 8006964411 Bradyrhizobium sp. sBnM-33 Isolate Nodule
178 8006994254 Bradyrhizobium sp. sGM-13 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 92.54
Metatranscriptomes 0.44
Isolates 7.02

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 27.07
Nodule 2.18
Rhizoplane 2.62
Rhizosphere 57.21
Stem 0
Stem Tuber 0
Unclassified 0.87

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500562_019171 3300053108 Bacteria 1768
2 rootH2_10174329 3300003320 Bacteria 1244
3 rootL2_10079553 3300003322 Bacteria 2848
4 rootH1_10166702 3300003323 Bacteria 2179
5 Ga0006562J51391_1002687 3300003578 Bacteria 2776
6 Ga0055526_1003646 3300003771 Bacteria 9637
7 Ga0055524_1000020 3300003775 Bacteria 227971
8 Ga0070658_10432185 3300005327 Bacteria 1133
9 Ga0068868_100131417 3300005338 Bacteria 2049
10 Ga0070661_100320143 3300005344 Bacteria 1211
11 Ga0070668_100494261 3300005347 Bacteria 1058
12 Ga0070671_100329744 3300005355 Bacteria 1301
13 Ga0070674_100498428 3300005356 Bacteria 1014
14 Ga0070667_100420786 3300005367 Bacteria 1218
15 Ga0070709_10002180 3300005434 Bacteria 10604
16 Ga0070714_100005154 3300005435 Bacteria 9947
17 Ga0070713_100109302 3300005436 Bacteria 2409
18 Ga0070710_10000715 3300005437 Bacteria 15801
19 Ga0070701_10252658 3300005438 Bacteria 1065
20 Ga0070711_100058197 3300005439 Bacteria 2679
21 Ga0070663_100704320 3300005455 Bacteria 858
22 Ga0070678_100263064 3300005456 Bacteria 1452
23 Ga0070662_100537823 3300005457 Bacteria 978
24 Ga0068853_100215437 3300005539 Bacteria 1752
25 Ga0070665_100091173 3300005548 Bacteria 3053
26 Ga0070665_100172412 3300005548 Bacteria 2164
27 Ga0070665_100402770 3300005548 Bacteria 1376
28 Ga0070664_100365879 3300005564 Bacteria 1314
29 Ga0068857_100006932 3300005577 Bacteria 9752
30 Ga0068856_100453347 3300005614 Bacteria 1303
31 Ga0068858_100130256 3300005842 Bacteria 2358
32 Ga0068860_100272684 3300005843 Bacteria 1652
33 Ga0081455_10016791 3300005937 Bacteria 7044
34 Ga0081455_10165199 3300005937 Bacteria 1692
35 Ga0081539_10027397 3300005985 Bacteria 3611
36 Ga0081539_10164555 3300005985 Bacteria 1054
37 Ga0075365_10026377 3300006038 Bacteria 3688
38 Ga0075365_10050150 3300006038 Bacteria 2753
39 Ga0075365_10193834 3300006038 Bacteria 1422
40 Ga0075365_10366029 3300006038 Bacteria 1016
41 Ga0075363_100001666 3300006048 Bacteria 8590
42 Ga0075363_100013477 3300006048 Bacteria 3965
43 Ga0075363_100029567 3300006048 Bacteria 2830
44 Ga0075363_100061631 3300006048 Bacteria 2022
45 Ga0075364_10278106 3300006051 Bacteria 1139
46 Ga0070716_100034797 3300006173 Bacteria 2765
47 Ga0075362_10051068 3300006177 Bacteria 1850
48 Ga0075367_10013751 3300006178 Bacteria 4363
49 Ga0075369_10141233 3300006186 Bacteria 1098
50 Ga0075369_10165544 3300006186 Bacteria 1014
51 Ga0075370_10005417 3300006353 Bacteria 6342
52 Ga0075428_100218084 3300006844 Bacteria 2060
53 Ga0075434_100182223 3300006871 Bacteria 2121
54 Ga0105245_10126362 3300009098 Bacteria 2394
55 Ga0105247_10346149 3300009101 Bacteria 1044
56 Ga0114129_10141635 3300009147 Bacteria 3295
57 Ga0105241_10054571 3300009174 Bacteria 3059
58 Ga0105241_10358015 3300009174 Bacteria 1269
59 Ga0105248_10201241 3300009177 Bacteria 2244
60 Ga0105237_10189057 3300009545 Bacteria 2059
61 Ga0105249_10384168 3300009553 Bacteria 1431
62 Ga0157374_10331773 3300013296 Bacteria 1509
63 Ga0157378_10132889 3300013297 Bacteria 2305
64 Ga0157375_10573896 3300013308 Bacteria 1288
65 Ga0157375_10821779 3300013308 Bacteria 1077
66 Ga0163163_10097380 3300014325 Bacteria 2962
67 Ga0182008_10000055 3300014497 Bacteria 102214
68 Ga0157377_10328356 3300014745 Bacteria 1019
69 Ga0157379_10521053 3300014968 Bacteria 1104
70 Ga0209129_1003179 3300025258 Bacteria 7348
71 Ga0209673_1006610 3300025273 Bacteria 5549
72 Ga0209675_1000569 3300025291 Bacteria 26589
73 Ga0209025_1007388 3300025294 Bacteria 8210
74 Ga0209564_1000049 3300025295 Bacteria 362075
75 Ga0209758_1000313 3300025297 Bacteria 93883
76 Ga0209758_1001092 3300025297 Bacteria 35145
77 Ga0209758_1001096 3300025297 Bacteria 35059
78 Ga0209256_1000014 3300025299 Bacteria 687409
79 Ga0207710_10180952 3300025900 Bacteria 1034
80 Ga0207688_10309953 3300025901 Bacteria 966
81 Ga0207647_10197464 3300025904 Bacteria 1164
82 Ga0207699_10001563 3300025906 Bacteria 10855
83 Ga0207654_10041104 3300025911 Bacteria 2609
84 Ga0207654_10193313 3300025911 Bacteria 1335
85 Ga0207671_10265777 3300025914 Bacteria 1351
86 Ga0207671_10642599 3300025914 Bacteria 845
87 Ga0207663_10056064 3300025916 Bacteria 2476
88 Ga0207694_10294093 3300025924 Bacteria 1336
89 Ga0207650_10494066 3300025925 Bacteria 1022
90 Ga0207687_10426930 3300025927 Bacteria 1095
91 Ga0207700_10106476 3300025928 Bacteria 2248
92 Ga0207664_10009453 3300025929 Bacteria 6844
93 Ga0207706_10135794 3300025933 Bacteria 2164
94 Ga0207665_10048000 3300025939 Bacteria 2864
95 Ga0207689_10181641 3300025942 Bacteria 1735
96 Ga0207667_10222564 3300025949 Bacteria 1933
97 Ga0207668_10132548 3300025972 Bacteria 1905
98 Ga0207668_10428354 3300025972 Bacteria 1124
99 Ga0207677_10105387 3300026023 Bacteria 2086
100 Ga0207703_10287131 3300026035 Bacteria 1496
101 Ga0207639_10353234 3300026041 Bacteria 1313
102 Ga0207678_10028533 3300026067 Bacteria 4871
103 Ga0207678_10115463 3300026067 Bacteria 2290
104 Ga0207678_10431135 3300026067 Bacteria 1144
105 Ga0207708_10623928 3300026075 Bacteria 915
106 Ga0207676_11168698 3300026095 Bacteria 762
107 Ga0207674_10367406 3300026116 Unclassified 1391
108 Ga0207675_100308457 3300026118 Bacteria 1543
109 Ga0207675_100381867 3300026118 Bacteria 1385
110 Ga0207683_10410536 3300026121 Bacteria 1246
111 Ga0207683_10643079 3300026121 Bacteria 982
112 Ga0209813_10076828 3300027866 Bacteria 1096
113 Ga0268266_10001162 3300028379 Bacteria 32576
114 Ga0268265_10306044 3300028380 Bacteria 1433
115 Ga0268265_10372409 3300028380 Bacteria 1311
116 Ga0265325_10025613 3300031241 Bacteria 3202
117 Ga0265339_10124658 3300031249 Bacteria 1321
118 Ga0265316_10182935 3300031344 Bacteria 1560
119 Ga0307513_10093159 3300031456 Bacteria 3063
120 Ga0307513_10103757 3300031456 Bacteria 2859
121 Ga0307509_10000016 3300031507 Bacteria 266991
122 Ga0307408_100218801 3300031548 Bacteria 1553
123 Ga0307405_10382221 3300031731 Bacteria 1096
124 Ga0307413_10319847 3300031824 Bacteria 1185
125 Ga0307406_10173786 3300031901 Bacteria 1562
126 Ga0307409_100029770 3300031995 Bacteria 3913
127 Ga0307409_100252153 3300031995 Bacteria 1614
128 Ga0307416_100335019 3300032002 Bacteria 1523
129 Ga0307416_100433906 3300032002 Bacteria 1362
130 Ga0307416_100644304 3300032002 Bacteria 1144
131 Ga0307414_10059388 3300032004 Bacteria 2700
132 Ga0307414_10095702 3300032004 Bacteria 2220
133 Ga0307411_10322517 3300032005 Bacteria 1248
134 Ga0307411_10367818 3300032005 Bacteria 1178
135 Ga0307411_10497262 3300032005 Bacteria 1030
136 Ga0307415_100113005 3300032126 Bacteria 2019
137 Ga0307415_100132780 3300032126 Bacteria 1888
138 Ga0307415_100181019 3300032126 Bacteria 1654
139 Ga0307415_100363333 3300032126 Bacteria 1223
140 Ga0451787_682250 3300041441 Bacteria 2247
141 Ga0451802_0928124 3300041460 Bacteria 2216
142 Ga0495584_0117895 3300046491 Bacteria 1344
143 Ga0495668_0157526 3300046616 Bacteria 1244
144 Ga0495625_0213372 3300046660 Bacteria 1268
145 Ga0495669_0134063 3300046684 Bacteria 1167
146 Ga0495672_0060378 3300047320 Bacteria 2190
147 Ga0495683_0151073 3300047323 Bacteria 1081
148 Ga0496102_0313124 3300048905 Bacteria 1479
149 Ga0496106_0405461 3300048909 Bacteria 1096
150 Ga0496115_0003604 3300048918 Bacteria 11132
151 Ga0496115_0042514 3300048918 Bacteria 3620
152 Ga0496118_0000513 3300048921 Bacteria 63612
153 Ga0496118_0030352 3300048921 Bacteria 4513
154 Ga0496120_0000893 3300048923 Bacteria 41950
155 Ga0496120_0118963 3300048923 Bacteria 1369
156 Ga0496121_0001770 3300048924 Bacteria 35109
157 Ga0496121_0010420 3300048924 Bacteria 10487
158 Ga0496121_0048707 3300048924 Bacteria 3603
159 Ga0496123_0004201 3300048926 Bacteria 15371
160 Ga0496124_0188313 3300048927 Bacteria 1581
161 Ga0496125_0009755 3300048928 Bacteria 9800
162 Ga0496126_0042487 3300048929 Bacteria 4198
163 Ga0496126_0289663 3300048929 Bacteria 1354
164 Ga0501034_0570240 3300049571 Bacteria 1040
165 Ga0501034_0918545 3300049571 Bacteria 762
166 Ga0501041_0106394 3300049577 Bacteria 1739
167 Ga0501048_0328275 3300049582 Bacteria 1090
168 Ga0501048_0376957 3300049582 Bacteria 1013
169 Ga0501070_0075570 3300049586 Bacteria 2789
170 Ga0501075_0188597 3300049591 Bacteria 1573
171 Ga0501079_0330545 3300049741 Bacteria 1194
172 Ga0501080_0183491 3300049742 Bacteria 1925
173 Ga0501035_0013738 3300049822 Bacteria 7473
174 Ga0501044_0444869 3300049823 Bacteria 1203
175 nmdc:mga03683_46608_c1 3300050489 Bacteria 1797
176 nmdc:mga03n38_5861_c1 3300050490 Bacteria 4223
177 nmdc:mga03n38_79_c1 3300050490 Bacteria 20629
178 nmdc:mga00v17_240341_c1 3300050491 Bacteria 1174
179 nmdc:mga0yw44_10971_c1 3300050492 Bacteria 4650
180 nmdc:mga0yw44_242464_c1 3300050492 Bacteria 1198
181 nmdc:mga0yw44_345008_c1 3300050492 Bacteria 1002
182 nmdc:mga0yw44_89886_c1 3300050492 Bacteria 1939
183 nmdc:mga0k408_233110_c1 3300050493 Bacteria 1099
184 nmdc:mga0k408_367319_c1 3300050493 Unclassified 857
185 nmdc:mga0k408_74033_c1 3300050493 Bacteria 1990
186 nmdc:mga06z11_135869_c1 3300050494 Bacteria 1385
187 nmdc:mga06z11_41117_c1 3300050494 Bacteria 2312
188 nmdc:mga06z11_49405_c1 3300050494 Bacteria 2146
189 nmdc:mga04h51_23141_c1 3300050495 Bacteria 1889
190 nmdc:mga07m45_8137_c1 3300050496 Bacteria 5375
191 nmdc:mga05p37_356071_c1 3300050507 Bacteria 1722
192 nmdc:mga0n895_890147_c1 3300050512 Bacteria 876
193 nmdc:mga0rr50_305455_c1 3300050513 Bacteria 1331
194 nmdc:mga0sz30_116111_c1 3300050516 Bacteria 1175
195 Ga0500643_079037 3300053087 Bacteria 906
196 Ga0500651_0022738 3300053093 Bacteria 3919
197 Ga0500651_0248136 3300053093 Bacteria 1036
198 Ga0500650_0195442 3300053098 Bacteria 923
199 Ga0500593_001114 3300053117 Bacteria 9677
200 Ga0500595_001530 3300053119 Bacteria 12274
201 Ga0500595_011613 3300053119 Bacteria 3437
202 Ga0500642_0230791 3300053130 Bacteria 855
203 Ga0500658_0086107 3300053134 Bacteria 1352
204 Ga0500559_0000873 3300053136 Bacteria 19330
205 Ga0500586_004739 3300053145 Bacteria 3372
206 Ga0500588_0024582 3300053146 Bacteria 1664
207 Ga0500589_051425 3300053147 Bacteria 1911
208 Ga0500604_0039282 3300053151 Bacteria 1423
209 Ga0500616_0026890 3300053153 Bacteria 3181
210 Ga0500622_0150594 3300053156 Bacteria 1100
211 Ga0500633_0000886 3300053160 Bacteria 5220
212 Ga0500611_049961 3300053727 Bacteria 954
213 2511390902 2511231027 Bacteria 5013807
214 2688070037 2687453257 Bacteria 6784659
215 2723844853 2721755755 Bacteria 8322773
216 2793082282
217 2837682318 2837678835 Bacteria 5252418
218 2842873758 2842871566 Bacteria 4827117
219 2874605428 2874604998 Bacteria 7834745
220 2876811001 2876808645 Bacteria 8824342
221 2879115724 2879110137 Bacteria 8907982
222 2894417692 2894414249 Bacteria 4405451
223 2917699077 2917699015 Bacteria 7043791
224 2928526153 2928521798 Bacteria 4960112
225 2945984818 2945984333 Bacteria 7358892
226 2954014949 2954011201 Bacteria 4762601
227 2995953583 2995948881 Bacteria 6358104
228 8006967093 8006964411 Bacteria 8966052
229 8006995800 8006994254 Bacteria 8309700
230 Ga0500562_019171
231 rootH2_10174329
232 rootL2_10079553
233 rootH1_10166702
234 Ga0006562J51391_1002687
235 Ga0055526_1003646
236 Ga0055524_1000020
237 Ga0070658_10432185
238 Ga0068868_100131417
239 Ga0070661_100320143
240 Ga0070668_100494261
241 Ga0070671_100329744
242 Ga0070674_100498428
243 Ga0070667_100420786
244 Ga0070709_10002180
245 Ga0070714_100005154
246 Ga0070713_100109302
247 Ga0070710_10000715
248 Ga0070701_10252658
249 Ga0070711_100058197
250 Ga0070663_100704320
251 Ga0070678_100263064
252 Ga0070662_100537823
253 Ga0068853_100215437
254 Ga0070665_100091173
255 Ga0070665_100172412
256 Ga0070665_100402770
257 Ga0070664_100365879
258 Ga0068857_100006932
259 Ga0068856_100453347
260 Ga0068858_100130256
261 Ga0068860_100272684
262 Ga0081455_10016791
263 Ga0081455_10165199
264 Ga0081539_10027397
265 Ga0081539_10164555
266 Ga0075365_10026377
267 Ga0075365_10050150
268 Ga0075365_10193834
269 Ga0075365_10366029
270 Ga0075363_100001666
271 Ga0075363_100013477
272 Ga0075363_100029567
273 Ga0075363_100061631
274 Ga0075364_10278106
275 Ga0070716_100034797
276 Ga0075362_10051068
277 Ga0075367_10013751
278 Ga0075369_10141233
279 Ga0075369_10165544
280 Ga0075370_10005417
281 Ga0075428_100218084
282 Ga0075434_100182223
283 Ga0105245_10126362
284 Ga0105247_10346149
285 Ga0114129_10141635
286 Ga0105241_10054571
287 Ga0105241_10358015
288 Ga0105248_10201241
289 Ga0105237_10189057
290 Ga0105249_10384168
291 Ga0157374_10331773
292 Ga0157378_10132889
293 Ga0157375_10573896
294 Ga0157375_10821779
295 Ga0163163_10097380
296 Ga0182008_10000055
297 Ga0157377_10328356
298 Ga0157379_10521053
299 Ga0209129_1003179
300 Ga0209673_1006610
301 Ga0209675_1000569
302 Ga0209025_1007388
303 Ga0209564_1000049
304 Ga0209758_1000313
305 Ga0209758_1001092
306 Ga0209758_1001096
307 Ga0209256_1000014
308 Ga0207710_10180952
309 Ga0207688_10309953
310 Ga0207647_10197464
311 Ga0207699_10001563
312 Ga0207654_10041104
313 Ga0207654_10193313
314 Ga0207671_10265777
315 Ga0207671_10642599
316 Ga0207663_10056064
317 Ga0207694_10294093
318 Ga0207650_10494066
319 Ga0207687_10426930
320 Ga0207700_10106476
321 Ga0207664_10009453
322 Ga0207706_10135794
323 Ga0207665_10048000
324 Ga0207689_10181641
325 Ga0207667_10222564
326 Ga0207668_10132548
327 Ga0207668_10428354
328 Ga0207677_10105387
329 Ga0207703_10287131
330 Ga0207639_10353234
331 Ga0207678_10028533
332 Ga0207678_10115463
333 Ga0207678_10431135
334 Ga0207708_10623928
335 Ga0207676_11168698
336 Ga0207674_10367406
337 Ga0207675_100308457
338 Ga0207675_100381867
339 Ga0207683_10410536
340 Ga0207683_10643079
341 Ga0209813_10076828
342 Ga0268266_10001162
343 Ga0268265_10306044
344 Ga0268265_10372409
345 Ga0265325_10025613
346 Ga0265339_10124658
347 Ga0265316_10182935
348 Ga0307513_10093159
349 Ga0307513_10103757
350 Ga0307509_10000016
351 Ga0307408_100218801
352 Ga0307405_10382221
353 Ga0307413_10319847
354 Ga0307406_10173786
355 Ga0307409_100029770
356 Ga0307409_100252153
357 Ga0307416_100335019
358 Ga0307416_100433906
359 Ga0307416_100644304
360 Ga0307414_10059388
361 Ga0307414_10095702
362 Ga0307411_10322517
363 Ga0307411_10367818
364 Ga0307411_10497262
365 Ga0307415_100113005
366 Ga0307415_100132780
367 Ga0307415_100181019
368 Ga0307415_100363333
369 Ga0451787_682250
370 Ga0451802_0928124
371 Ga0495584_0117895
372 Ga0495668_0157526
373 Ga0495625_0213372
374 Ga0495669_0134063
375 Ga0495672_0060378
376 Ga0495683_0151073
377 Ga0496102_0313124
378 Ga0496106_0405461
379 Ga0496115_0003604
380 Ga0496115_0042514
381 Ga0496118_0000513
382 Ga0496118_0030352
383 Ga0496120_0000893
384 Ga0496120_0118963
385 Ga0496121_0001770
386 Ga0496121_0010420
387 Ga0496121_0048707
388 Ga0496123_0004201
389 Ga0496124_0188313
390 Ga0496125_0009755
391 Ga0496126_0042487
392 Ga0496126_0289663
393 Ga0501034_0570240
394 Ga0501034_0918545
395 Ga0501041_0106394
396 Ga0501048_0328275
397 Ga0501048_0376957
398 Ga0501070_0075570
399 Ga0501075_0188597
400 Ga0501079_0330545
401 Ga0501080_0183491
402 Ga0501035_0013738
403 Ga0501044_0444869
404 nmdc:mga03683_46608_c1
405 nmdc:mga03n38_5861_c1
406 nmdc:mga03n38_79_c1
407 nmdc:mga00v17_240341_c1
408 nmdc:mga0yw44_10971_c1
409 nmdc:mga0yw44_242464_c1
410 nmdc:mga0yw44_345008_c1
411 nmdc:mga0yw44_89886_c1
412 nmdc:mga0k408_233110_c1
413 nmdc:mga0k408_367319_c1
414 nmdc:mga0k408_74033_c1
415 nmdc:mga06z11_135869_c1
416 nmdc:mga06z11_41117_c1
417 nmdc:mga06z11_49405_c1
418 nmdc:mga04h51_23141_c1
419 nmdc:mga07m45_8137_c1
420 nmdc:mga05p37_356071_c1
421 nmdc:mga0n895_890147_c1
422 nmdc:mga0rr50_305455_c1
423 nmdc:mga0sz30_116111_c1
424 Ga0500643_079037
425 Ga0500651_0022738
426 Ga0500651_0248136
427 Ga0500650_0195442
428 Ga0500593_001114
429 Ga0500595_001530
430 Ga0500595_011613
431 Ga0500642_0230791
432 Ga0500658_0086107
433 Ga0500559_0000873
434 Ga0500586_004739
435 Ga0500588_0024582
436 Ga0500589_051425
437 Ga0500604_0039282
438 Ga0500616_0026890
439 Ga0500622_0150594
440 Ga0500633_0000886
441 Ga0500611_049961
442 2511390902
443 2688070037
444 2723844853
445 2793082282
446 2837682318
447 2842873758
448 2874605428
449 2876811001
450 2879115724
451 2894417692
452 2917699077
453 2928526153
454 2945984818
455 2954014949
456 2995953583
457 8006967093
458 8006995800

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13649

Methyltransf_25

Methyltransferase domain

49

142

0.95

PF08241

Methyltransf_11

Methyltransferase domain

50

147

0.94

PF08242

Methyltransf_12

Methyltransferase domain

50

145

0.89

PF13847

Methyltransf_31

Methyltransferase domain

45

221

0.84

PF13489

Methyltransf_23

Methyltransferase domain

18

188

0.8

PF01209

Ubie_methyltran

ubiE/COQ5 methyltransferase family

14

220

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
3dtn-assembly1.cif.gz_B crystal structure of putative methyltransferase-mm_2633 from methanosarcina mazei . 0.8919 11 219
4gek-assembly1.cif.gz_A crystal structure of wild-type cmoa from e.coli 0.8829 6 220
8k5l-assembly2.cif.gz_C structure of trna (cmo5u34)-methyltransferase from fusobacterium nucleatum 0.8778 19 221
4iwn-assembly1.cif.gz_B crystal structure of a putative methyltransferase cmoa in complex with a novel sam derivative 0.8734 7 220
3dtn-assembly1.cif.gz_B crystal structure of putative methyltransferase-mm_2633 from methanosarcina mazei . 0.8724 11 219
ID Description Score Start End Superfamily
3dtnB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9039 11 219 3.40.50.150
af_A0A1D6QMW6_179_313_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8818 46 152 3.40.50.150
3dtnB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8799 11 219 3.40.50.150
af_D3ZQ63_181_335_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8599 44 135 3.40.50.150
af_Q9P3E7_8_144_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8568 43 147 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A4Q8QK14-F1-model_v4 Methyltransferase 0.9863 2 151 GO:0008168
GO:0032259
AF-A0A059X5T3-F1-model_v4 Methyltransferase domain protein 0.9847 1 134 GO:0008168
GO:0032259
AF-A0A059X5T3-F1-model_v4 Methyltransferase domain protein 0.9704 1 134 GO:0008168
GO:0032259
AF-A0A376AES0-F1-model_v4 Methyltransferase domain-containing protein 0.9686 2 221 GO:0008168
AF-A0A4D7QLY5-F1-model_v4 Class I SAM-dependent methyltransferase 0.9642 2 221 GO:0008168
GO:0032259

Map