F342286

General Info

Members Datasets Scaffolds Average Seq Length
229 163 458 393

Family's Representative Sequence

Representative Sequence 3300045836|Ga0466958_0063305|Ga0466958_0063305_56_1384
Length 419
Sequence VGRIGPQYAHLTDRQIPSGAAVQLRDTPDQQRFREELRAWLRATLPTLGPRPSQDDWPARRAYDSHWQALLHRAGYAGLNWPAEYGGRGATPTEHLIFLEESELAGAPYVGVNFVGLLHAGPTLIAEGTPGQRERHIPAILRGEEIWCQGFSEPDAGSDLAALRTRAVLDPSGEHYVVTGRKIWTSHAEVADYCELLVRTGPPDGPKHRGITWLIMPMDAPGVVLRPLMTAGGSTEFSEMILEDVRIPVANRVGAEGDGWRVAMVTFAFERGTGFVAEVVWARRRLAEIAALARRNSAWEDSETRRRIARLAAEFDALWALVKRTVSEAEHSAGGVPGPGSSVFKLRFSEARQHLDDLHADVRGRDALAFDDQACTYDGEPGYERLRSLAYTIAAGTSQIQRTIIGERILGLPKEGGGR

Samples

Sample ID Description Type Environment
1 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
2 3300001976 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7 Metagenome Rhizosphere
3 3300002076 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 Metagenome Rhizosphere
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
16 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
23 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
24 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
25 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
28 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
31 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
32 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
33 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
34 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
35 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
36 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
37 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
38 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
39 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
62 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
63 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
64 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
65 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
66 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
67 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
68 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
69 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
70 3300033545 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4 Metagenome Unclassified
71 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
72 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
73 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
74 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
75 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
76 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
77 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
78 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
79 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
80 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
81 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
82 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
83 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
84 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
85 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
86 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
87 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
88 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
89 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
90 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
91 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
92 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
93 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
94 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
95 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
96 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
97 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
98 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
99 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
100 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
101 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
102 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
103 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
104 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
105 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
106 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
107 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
108 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
109 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
110 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
111 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
112 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
113 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
114 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
115 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
116 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
117 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
118 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
119 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
120 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
127 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
128 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
129 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
130 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
131 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
132 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
133 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
134 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
135 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
136 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
137 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
138 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
139 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
140 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
141 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
142 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
143 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
144 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
145 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
146 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
147 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
148 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
149 2508501039 Frankia saprophytica CN3 Isolate Nodule
150 2671180195 Frankia sp. CcI49 Isolate Nodule
151 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
152 2684623035 Frankia sp. NRRL B-16219 Isolate Rhizosphere
153 2687453737 Frankia sp. BMG5.36 Isolate Nodule
154 2687453743 Frankia colletiae Cc1.17 Isolate Nodule
155 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
156 2773857922 Frankia sp. CcI49 Isolate Nodule
157 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
158 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
159 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
160 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
161 8002775197 Frankia nepalensis CN7 Isolate Nodule
162 8002784119 Frankia sp. AgB1.9 Isolate Nodule
163 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.01
Metatranscriptomes 0.44
Isolates 6.55

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.73
Nodule 3.93
Rhizoplane 5.24
Rhizosphere 77.73
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466958_0063305 3300045836 Bacteria 2256
2 JGI24752J21851_1000016 3300001976 Bacteria 19236
3 JGI24749J21850_1000150 3300002076 Bacteria 11138
4 rootH1_10000987 3300003323 Bacteria 2291
5 Ga0070680_100000606 3300005336 Bacteria 24795
6 Ga0070680_100235116 3300005336 Bacteria 1548
7 Ga0070660_100172753 3300005339 Bacteria 1746
8 Ga0070660_100188299 3300005339 Bacteria 1671
9 Ga0070668_100003106 3300005347 Bacteria 12257
10 Ga0070675_100230325 3300005354 Bacteria 1616
11 Ga0070714_100003735 3300005435 Bacteria 11415
12 Ga0070708_100001392 3300005445 Bacteria 18474
13 Ga0070708_100006563 3300005445 Bacteria 9259
14 Ga0070708_100054246 3300005445 Bacteria 3559
15 Ga0070708_100080673 3300005445 Bacteria 2945
16 Ga0070681_10000023 3300005458 Bacteria 112399
17 Ga0070681_10004793 3300005458 Bacteria 12963
18 Ga0070681_10053097 3300005458 Bacteria 4039
19 Ga0070681_10101834 3300005458 Bacteria 2817
20 Ga0070685_10104825 3300005466 Bacteria 1732
21 Ga0070707_100118238 3300005468 Bacteria 2573
22 Ga0070679_100000004 3300005530 Bacteria 263662
23 Ga0070679_100044898 3300005530 Bacteria 4402
24 Ga0068853_100082833 3300005539 Bacteria 2810
25 Ga0070672_100036607 3300005543 Bacteria 3740
26 Ga0070665_100043906 3300005548 Bacteria 4490
27 Ga0070665_100080143 3300005548 Bacteria 3270
28 Ga0068855_100006049 3300005563 Bacteria 14758
29 Ga0070664_100231566 3300005564 Bacteria 1656
30 Ga0068854_100035753 3300005578 Bacteria 3479
31 Ga0068852_100037981 3300005616 Bacteria 4044
32 Ga0068860_100030711 3300005843 Bacteria 5167
33 Ga0075365_10024338 3300006038 Bacteria 3818
34 Ga0075365_10102802 3300006038 Bacteria 1958
35 Ga0075365_10130950 3300006038 Bacteria 1736
36 Ga0075363_100025982 3300006048 Bacteria 2992
37 Ga0075363_100029946 3300006048 Bacteria 2814
38 Ga0075363_100069704 3300006048 Bacteria 1908
39 Ga0075364_10000404 3300006051 Bacteria 21507
40 Ga0075364_10036958 3300006051 Bacteria 3159
41 Ga0075428_100029677 3300006844 Bacteria 6051
42 Ga0075428_100064298 3300006844 Bacteria 4018
43 Ga0075428_100229401 3300006844 Bacteria 2004
44 Ga0068865_100112211 3300006881 Bacteria 2013
45 Ga0105240_10407100 3300009093 Bacteria 1531
46 Ga0111539_10044242 3300009094 Bacteria 5335
47 Ga0111539_10076021 3300009094 Bacteria 3955
48 Ga0105245_10006894 3300009098 Bacteria 9963
49 Ga0105242_10162406 3300009176 Bacteria 1957
50 Ga0105238_10000766 3300009551 Bacteria 33451
51 Ga0157370_10086997 3300013104 Bacteria 2935
52 Ga0157369_10242073 3300013105 Bacteria 1884
53 Ga0157374_10232916 3300013296 Bacteria 1810
54 Ga0157375_10162537 3300013308 Bacteria 2376
55 Ga0213876_10001171 3300021384 Bacteria 16573
56 Ga0224712_10029478 3300022467 Bacteria 1971
57 Ga0207654_10060171 3300025911 Bacteria 2218
58 Ga0207707_10000029 3300025912 Bacteria 162223
59 Ga0207707_10019209 3300025912 Bacteria 5963
60 Ga0207695_10007514 3300025913 Bacteria 13828
61 Ga0207671_10000216 3300025914 Bacteria 86159
62 Ga0207660_10000606 3300025917 Bacteria 24200
63 Ga0207657_10042213 3300025919 Bacteria 4025
64 Ga0207657_10177699 3300025919 Bacteria 1722
65 Ga0207652_10000049 3300025921 Bacteria 123521
66 Ga0207646_10114660 3300025922 Bacteria 2420
67 Ga0207694_10006653 3300025924 Bacteria 8781
68 Ga0207659_10224641 3300025926 Bacteria 1512
69 Ga0207664_10016609 3300025929 Bacteria 5375
70 Ga0207686_10029009 3300025934 Bacteria 3259
71 Ga0207686_10229602 3300025934 Bacteria 1344
72 Ga0207691_10034476 3300025940 Bacteria 4706
73 Ga0207667_10068058 3300025949 Bacteria 3709
74 Ga0207640_10044975 3300025981 Bacteria 2832
75 Ga0207677_10227476 3300026023 Bacteria 1500
76 Ga0207639_10191410 3300026041 Bacteria 1748
77 Ga0207702_10244939 3300026078 Bacteria 1681
78 Ga0207648_10250384 3300026089 Bacteria 1579
79 Ga0207675_100383985 3300026118 Bacteria 1382
80 Ga0207683_10186283 3300026121 Bacteria 1883
81 Ga0268266_10037544 3300028379 Bacteria 4126
82 Ga0265325_10024011 3300031241 Bacteria 3319
83 Ga0265339_10048187 3300031249 Bacteria 2337
84 Ga0265327_10000222 3300031251 Bacteria 115792
85 Ga0265327_10005119 3300031251 Bacteria 11134
86 Ga0265327_10014418 3300031251 Bacteria 5172
87 Ga0265327_10016630 3300031251 Bacteria 4660
88 Ga0265327_10019812 3300031251 Bacteria 4120
89 Ga0316576_10089557 3300031727 Bacteria 2292
90 Ga0316576_10200866 3300031727 Bacteria 1502
91 Ga0316578_10008903 3300031728 Bacteria 5133
92 Ga0307405_10057880 3300031731 Bacteria 2437
93 Ga0307410_10003419 3300031852 Bacteria 7963
94 Ga0307407_10024828 3300031903 Bacteria 3150
95 Ga0307409_100017389 3300031995 Bacteria 4791
96 Ga0316214_1006243 3300033545 Bacteria 1572
97 Ga0373934_0004975 3300035086 Bacteria 4927
98 Ga0373936_0008060 3300035113 Bacteria 3958
99 Ga0373954_0010577 3300035118 Bacteria 4073
100 Ga0373956_0019723 3300035119 Bacteria 2862
101 Ga0373943_0014074 3300035170 Bacteria 3617
102 Ga0316574_0009546 3300035398 Bacteria 5439
103 Ga0316574_0011394 3300035398 Bacteria 5051
104 Ga0316574_0016981 3300035398 Bacteria 4250
105 Ga0316574_0166688 3300035398 Bacteria 1419
106 Ga0373933_0012711 3300035724 Bacteria 4652
107 Ga0373933_0031537 3300035724 Bacteria 3075
108 Ga0373937_0012970 3300036401 Bacteria 7340
109 Ga0373937_0117829 3300036401 Bacteria 2473
110 Ga0316582_0007464 3300036647 Bacteria 5825
111 Ga0316582_0021422 3300036647 Bacteria 3819
112 Ga0373925_0151306 3300037068 Bacteria 1822
113 Ga0395901_0249469 3300038443 Bacteria 1850
114 Ga0436365_1132862 3300039437 Bacteria 4857
115 Ga0436365_1149052 3300039437 Bacteria 11795
116 Ga0436365_1786740 3300039437 Bacteria 1467
117 Ga0439436_0000799 3300041404 Bacteria 8529
118 Ga0451837_0257518 3300041494 Bacteria 1841
119 Ga0450903_005801 3300042138 Bacteria 2061
120 Ga0466969_0002705 3300044656 Bacteria 9465
121 Ga0466969_0008519 3300044656 Bacteria 5441
122 Ga0466966_0017696 3300044684 Bacteria 4706
123 Ga0466961_0032391 3300044693 Bacteria 3358
124 Ga0466961_0109660 3300044693 Bacteria 1737
125 Ga0466963_0030871 3300044694 Bacteria 3461
126 Ga0466970_0062950 3300044765 Bacteria 1989
127 Ga0466959_0004508 3300045049 Bacteria 9337
128 Ga0466959_0139937 3300045049 Bacteria 1711
129 Ga0495638_0157201 3300046460 Bacteria 1314
130 Ga0495651_0001324 3300046462 Bacteria 19198
131 Ga0495651_0006730 3300046462 Bacteria 8787
132 Ga0495651_0055277 3300046462 Bacteria 3051
133 Ga0495651_0192298 3300046462 Bacteria 1435
134 Ga0495653_0039092 3300046463 Bacteria 3719
135 Ga0495653_0060155 3300046463 Bacteria 2879
136 Ga0495608_0011432 3300046511 Bacteria 6178
137 Ga0495618_0040752 3300046514 Bacteria 2924
138 Ga0495628_0016748 3300046516 Bacteria 6111
139 Ga0495628_0130750 3300046516 Bacteria 1920
140 Ga0495652_0007418 3300046529 Bacteria 10111
141 Ga0495652_0036551 3300046529 Bacteria 4269
142 Ga0495667_0006764 3300046559 Bacteria 7782
143 Ga0495634_0057675 3300046642 Bacteria 2591
144 Ga0495635_0011931 3300046663 Bacteria 6087
145 Ga0495657_0009775 3300046675 Bacteria 7242
146 Ga0495657_0031502 3300046675 Bacteria 3706
147 Ga0495599_0102117 3300046678 Bacteria 1787
148 Ga0495623_0018825 3300046679 Bacteria 4458
149 Ga0495646_0083249 3300046680 Bacteria 1860
150 Ga0495600_0020911 3300046809 Bacteria 4188
151 Ga0495600_0191877 3300046809 Bacteria 1313
152 Ga0495674_0042655 3300047319 Bacteria 4045
153 Ga0495674_0129479 3300047319 Bacteria 2127
154 Ga0495680_0010915 3300047322 Bacteria 8070
155 Ga0495680_0022412 3300047322 Bacteria 5263
156 Ga0495684_0041221 3300047471 Bacteria 3538
157 Ga0495602_0016782 3300048088 Bacteria 7353
158 Ga0495602_0074055 3300048088 Bacteria 2896
159 Ga0496102_0003579 3300048905 Bacteria 13161
160 Ga0496102_0273585 3300048905 Bacteria 1592
161 Ga0496105_0033277 3300048908 Bacteria 4231
162 Ga0496105_0215938 3300048908 Bacteria 1562
163 Ga0496108_0123674 3300048911 Bacteria 2220
164 Ga0496108_0228780 3300048911 Bacteria 1617
165 Ga0496109_0119149 3300048912 Bacteria 2458
166 Ga0496109_0274759 3300048912 Bacteria 1588
167 Ga0496112_0114415 3300048915 Bacteria 2668
168 Ga0496113_0144545 3300048916 Bacteria 1873
169 Ga0496114_0051465 3300048917 Bacteria 3429
170 Ga0496115_0027098 3300048918 Bacteria 4479
171 Ga0496126_0000040 3300048929 Bacteria 345144
172 Ga0501032_0005045 3300049569 Bacteria 9869
173 Ga0501034_0004450 3300049571 Bacteria 15579
174 Ga0501034_0008322 3300049571 Bacteria 10976
175 Ga0501034_0071059 3300049571 Bacteria 3491
176 Ga0501038_0099304 3300049574 Bacteria 2427
177 Ga0501043_0013552 3300049579 Bacteria 6379
178 Ga0501046_0019676 3300049580 Bacteria 5595
179 Ga0501047_0007227 3300049581 Bacteria 10438
180 Ga0501069_0000044 3300049585 Bacteria 75705
181 Ga0501069_0012439 3300049585 Bacteria 4524
182 Ga0501070_0000001 3300049586 Bacteria 519187
183 Ga0501070_0080585 3300049586 Bacteria 2694
184 Ga0501071_0025825 3300049587 Bacteria 4117
185 Ga0501071_0030382 3300049587 Bacteria 3821
186 Ga0501073_0299675 3300049589 Bacteria 1109
187 Ga0501076_0170151 3300049592 Bacteria 1776
188 Ga0501223_000023 3300049663 Bacteria 64396
189 Ga0501224_000001 3300049664 Bacteria 308131
190 Ga0501233_000014 3300049668 Bacteria 27843
191 Ga0501225_0000477 3300049705 Bacteria 12480
192 Ga0501080_0003271 3300049742 Bacteria 14304
193 Ga0501080_0012958 3300049742 Bacteria 7655
194 Ga0501080_0021431 3300049742 Bacteria 5982
195 Ga0501080_0041202 3300049742 Bacteria 4304
196 Ga0501226_000050 3300049853 Bacteria 51521
197 nmdc:mga00v17_1174_c1 3300050491 Bacteria 13777
198 nmdc:mga00v17_117890_c1 3300050491 Bacteria 1689
199 nmdc:mga00v17_138890_c1 3300050491 Bacteria 1557
200 nmdc:mga00v17_69055_c1 3300050491 Bacteria 2186
201 nmdc:mga0yw44_7639_c1 3300050492 Bacteria 5332
202 nmdc:mga06z11_47992_c1 3300050494 Bacteria 2171
203 nmdc:mga06r32_125249_c1 3300050510 Bacteria 2537
204 nmdc:mga08y16_60987_c1 3300050511 Bacteria 3938
205 nmdc:mga08y16_98211_c1 3300050511 Bacteria 3049
206 Ga0495601_0041793 3300053077 Bacteria 2875
207 Ga0495612_0002880 3300053078 Bacteria 7129
208 Ga0500566_0001013 3300053094 Bacteria 16187
209 Ga0500568_0000030 3300053139 Bacteria 159567
210 Ga0500568_0000037 3300053139 Bacteria 135208
211 Ga0500573_0043500 3300053140 Bacteria 2591
212 Ga0500616_0000307 3300053153 Bacteria 70503
213 Ga0500616_0003502 3300053153 Bacteria 11935
214 Ga0501084_0000082 3300054114 Bacteria 69523
215 2508674785 2508501039 Bacteria 9978592
216 2671839715 2671180195 Bacteria 9757215
217 2676205738 2675902999 Bacteria 9438463
218 2686538504 2684623035 Bacteria 8032739
219 2689964078 2687453737 Bacteria 11203906
220 2689991748 2687453743 Bacteria 8361025
221 2774850313 2773857921 Bacteria 9435764
222 2774857871 2773857922 Bacteria 9757215
223 2812358129 2811994879 Bacteria 9313447
224 2862285626 2862281513 Bacteria 9621493
225 2895890560 2895880812 Bacteria 11255272
226 2946067712 2946064051 Bacteria 8957905
227 8002780242 8002775197 Bacteria 10728764
228 8002791814 8002784119 Bacteria 9788632
229 8056672858 8056667051 Bacteria 6953971
230 Ga0466958_0063305
231 JGI24752J21851_1000016
232 JGI24749J21850_1000150
233 rootH1_10000987
234 Ga0070680_100000606
235 Ga0070680_100235116
236 Ga0070660_100172753
237 Ga0070660_100188299
238 Ga0070668_100003106
239 Ga0070675_100230325
240 Ga0070714_100003735
241 Ga0070708_100001392
242 Ga0070708_100006563
243 Ga0070708_100054246
244 Ga0070708_100080673
245 Ga0070681_10000023
246 Ga0070681_10004793
247 Ga0070681_10053097
248 Ga0070681_10101834
249 Ga0070685_10104825
250 Ga0070707_100118238
251 Ga0070679_100000004
252 Ga0070679_100044898
253 Ga0068853_100082833
254 Ga0070672_100036607
255 Ga0070665_100043906
256 Ga0070665_100080143
257 Ga0068855_100006049
258 Ga0070664_100231566
259 Ga0068854_100035753
260 Ga0068852_100037981
261 Ga0068860_100030711
262 Ga0075365_10024338
263 Ga0075365_10102802
264 Ga0075365_10130950
265 Ga0075363_100025982
266 Ga0075363_100029946
267 Ga0075363_100069704
268 Ga0075364_10000404
269 Ga0075364_10036958
270 Ga0075428_100029677
271 Ga0075428_100064298
272 Ga0075428_100229401
273 Ga0068865_100112211
274 Ga0105240_10407100
275 Ga0111539_10044242
276 Ga0111539_10076021
277 Ga0105245_10006894
278 Ga0105242_10162406
279 Ga0105238_10000766
280 Ga0157370_10086997
281 Ga0157369_10242073
282 Ga0157374_10232916
283 Ga0157375_10162537
284 Ga0213876_10001171
285 Ga0224712_10029478
286 Ga0207654_10060171
287 Ga0207707_10000029
288 Ga0207707_10019209
289 Ga0207695_10007514
290 Ga0207671_10000216
291 Ga0207660_10000606
292 Ga0207657_10042213
293 Ga0207657_10177699
294 Ga0207652_10000049
295 Ga0207646_10114660
296 Ga0207694_10006653
297 Ga0207659_10224641
298 Ga0207664_10016609
299 Ga0207686_10029009
300 Ga0207686_10229602
301 Ga0207691_10034476
302 Ga0207667_10068058
303 Ga0207640_10044975
304 Ga0207677_10227476
305 Ga0207639_10191410
306 Ga0207702_10244939
307 Ga0207648_10250384
308 Ga0207675_100383985
309 Ga0207683_10186283
310 Ga0268266_10037544
311 Ga0265325_10024011
312 Ga0265339_10048187
313 Ga0265327_10000222
314 Ga0265327_10005119
315 Ga0265327_10014418
316 Ga0265327_10016630
317 Ga0265327_10019812
318 Ga0316576_10089557
319 Ga0316576_10200866
320 Ga0316578_10008903
321 Ga0307405_10057880
322 Ga0307410_10003419
323 Ga0307407_10024828
324 Ga0307409_100017389
325 Ga0316214_1006243
326 Ga0373934_0004975
327 Ga0373936_0008060
328 Ga0373954_0010577
329 Ga0373956_0019723
330 Ga0373943_0014074
331 Ga0316574_0009546
332 Ga0316574_0011394
333 Ga0316574_0016981
334 Ga0316574_0166688
335 Ga0373933_0012711
336 Ga0373933_0031537
337 Ga0373937_0012970
338 Ga0373937_0117829
339 Ga0316582_0007464
340 Ga0316582_0021422
341 Ga0373925_0151306
342 Ga0395901_0249469
343 Ga0436365_1132862
344 Ga0436365_1149052
345 Ga0436365_1786740
346 Ga0439436_0000799
347 Ga0451837_0257518
348 Ga0450903_005801
349 Ga0466969_0002705
350 Ga0466969_0008519
351 Ga0466966_0017696
352 Ga0466961_0032391
353 Ga0466961_0109660
354 Ga0466963_0030871
355 Ga0466970_0062950
356 Ga0466959_0004508
357 Ga0466959_0139937
358 Ga0495638_0157201
359 Ga0495651_0001324
360 Ga0495651_0006730
361 Ga0495651_0055277
362 Ga0495651_0192298
363 Ga0495653_0039092
364 Ga0495653_0060155
365 Ga0495608_0011432
366 Ga0495618_0040752
367 Ga0495628_0016748
368 Ga0495628_0130750
369 Ga0495652_0007418
370 Ga0495652_0036551
371 Ga0495667_0006764
372 Ga0495634_0057675
373 Ga0495635_0011931
374 Ga0495657_0009775
375 Ga0495657_0031502
376 Ga0495599_0102117
377 Ga0495623_0018825
378 Ga0495646_0083249
379 Ga0495600_0020911
380 Ga0495600_0191877
381 Ga0495674_0042655
382 Ga0495674_0129479
383 Ga0495680_0010915
384 Ga0495680_0022412
385 Ga0495684_0041221
386 Ga0495602_0016782
387 Ga0495602_0074055
388 Ga0496102_0003579
389 Ga0496102_0273585
390 Ga0496105_0033277
391 Ga0496105_0215938
392 Ga0496108_0123674
393 Ga0496108_0228780
394 Ga0496109_0119149
395 Ga0496109_0274759
396 Ga0496112_0114415
397 Ga0496113_0144545
398 Ga0496114_0051465
399 Ga0496115_0027098
400 Ga0496126_0000040
401 Ga0501032_0005045
402 Ga0501034_0004450
403 Ga0501034_0008322
404 Ga0501034_0071059
405 Ga0501038_0099304
406 Ga0501043_0013552
407 Ga0501046_0019676
408 Ga0501047_0007227
409 Ga0501069_0000044
410 Ga0501069_0012439
411 Ga0501070_0000001
412 Ga0501070_0080585
413 Ga0501071_0025825
414 Ga0501071_0030382
415 Ga0501073_0299675
416 Ga0501076_0170151
417 Ga0501223_000023
418 Ga0501224_000001
419 Ga0501233_000014
420 Ga0501225_0000477
421 Ga0501080_0003271
422 Ga0501080_0012958
423 Ga0501080_0021431
424 Ga0501080_0041202
425 Ga0501226_000050
426 nmdc:mga00v17_1174_c1
427 nmdc:mga00v17_117890_c1
428 nmdc:mga00v17_138890_c1
429 nmdc:mga00v17_69055_c1
430 nmdc:mga0yw44_7639_c1
431 nmdc:mga06z11_47992_c1
432 nmdc:mga06r32_125249_c1
433 nmdc:mga08y16_60987_c1
434 nmdc:mga08y16_98211_c1
435 Ga0495601_0041793
436 Ga0495612_0002880
437 Ga0500566_0001013
438 Ga0500568_0000030
439 Ga0500568_0000037
440 Ga0500573_0043500
441 Ga0500616_0000307
442 Ga0500616_0003502
443 Ga0501084_0000082
444 2508674785
445 2671839715
446 2676205738
447 2686538504
448 2689964078
449 2689991748
450 2774850313
451 2774857871
452 2812358129
453 2862285626
454 2895890560
455 2946067712
456 8002780242
457 8002791814
458 8056672858

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

257

410

0.91

PF02770

Acyl-CoA_dh_M

Acyl-CoA dehydrogenase, middle domain

148

245

0.91

PF02771

Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

27

144

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
6wy9-assembly1.cif.gz_A-2 tcur3481-tcur3483 steroid acad g363a variant 0.877 8 386
6wy8-assembly1.cif.gz_D tcur3481-tcur3483 steroid acad 0.8711 1 386
6wy8-assembly1.cif.gz_D tcur3481-tcur3483 steroid acad 0.869 1 386
6wy9-assembly1.cif.gz_A-2 tcur3481-tcur3483 steroid acad g363a variant 0.8685 8 386
8hk0-assembly1.cif.gz_A crystal structure of fic32-33 complex from streptomyces ficellus nrrl 8067 0.8671 1 377
ID Description Score Start End Superfamily
af_P96855_462_572_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.966 127 236 2.40.110.10
af_P96855_462_572_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9492 127 236 2.40.110.10
af_I6Y3V5_2_119_1.10.540.10 Mainly Alpha;Orthogonal Bundle;Butyryl-Coa Dehydrogenase, subunit A; domain 1;Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.9476 9 120 1.10.540.10
af_Q6NWF0_171_282_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9303 127 236 2.40.110.10
4x28B02 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9281 124 231 2.40.110.10
ID Description Score Start End GO Terms
AF-A0A353HX35-F1-model_v4 Acyl-CoA dehydrogenase 0.9669 142 243 GO:0005886
GO:0016627
AF-A0A351EJS1-F1-model_v4 Acyl-CoA dehydrogenase 0.9539 130 219 GO:0005886
GO:0016627
AF-A0A7Y2PJT5-F1-model_v4 Acyl-CoA dehydrogenase 0.951 206 379 GO:0005886
GO:0016627
AF-A0A371PXN5-F1-model_v4 Acyl-CoA oxidase/dehydrogenase middle domain-containing protein 0.9509 143 222 GO:0005886
GO:0016627
AF-X8C5I8-F1-model_v4 deleted 0.9508 99 232

Map