F342272

General Info

Members Datasets Scaffolds Average Seq Length
229 152 458 412

Family's Representative Sequence

Representative Sequence 3300044712|Ga0453684_0264681|Ga0453684_0264681_288_1610
Length 440
Sequence MIAEHFSGCQTSRASSRIAGVTATTLSGFVLDDRHGLCCDGVPLAQVAASVGTPAYVYSAAGIRAAWTSLDRAFASVPHALHYALKANSTLAVLHVLRALGSRADANSVGEIEVALRAGFAPGDLVFTGVGKTPAELRRAVELGVRSINAESAGEISRLDEIAVAAGRRARVALRVNPDIDARSHPHISTGRRVNKFGVPIDEARALYRDIARRKGLQPTGVHVHIGSQITTLEPLRRAAAALVGLVADLREDGIQLEHVDLGGGLGISYDGSAVVTPEEYADAVIPLVRGLGLELLLEPGRAIVGPAGTLLARVVDIKGNAGGPVFAVIDAGMTELLRPAMYGAFHRVEAVSPRPGPSQRYDIVGPLCESSDTIGKDREMQPLAVGDLVAIMDAGAYGSAMSSMYNRRPLVCEVMVDEGTWRIVRRRQTIDDMLSTEIT

Samples

Sample ID Description Type Environment
1 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
13 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
21 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
35 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
39 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
40 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
41 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
42 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
43 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
45 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
46 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
47 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
48 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
49 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
50 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
51 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
52 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
54 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
56 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
58 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
59 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
60 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
61 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
62 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
63 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
64 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
65 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
66 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
67 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
68 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
69 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
98 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
99 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
103 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
104 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
105 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
106 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
107 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
108 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
109 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
110 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
111 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
112 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
113 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
114 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
115 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
116 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
117 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
118 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
119 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
120 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
121 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
122 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
123 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
124 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
125 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
126 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
127 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
134 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
135 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
136 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
137 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
138 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
139 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
140 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
141 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
142 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
143 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
144 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
145 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
146 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
147 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
148 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
149 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
150 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
151 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
152 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.8
Nodule 0
Rhizoplane 2.62
Rhizosphere 92.14
Stem 0
Stem Tuber 0
Unclassified 4.8

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0453684_0264681 3300044712 Bacteria 1968
2 JGI24751J29686_10002775 3300002459 Bacteria 3521
3 Ga0065712_10070616 3300005290 Bacteria 5842
4 Ga0065707_10004769 3300005295 Bacteria 3974
5 Ga0070676_10127988 3300005328 Bacteria 1602
6 Ga0070683_100002445 3300005329 Bacteria 14778
7 Ga0070690_100024878 3300005330 Bacteria 3685
8 Ga0070670_100010332 3300005331 Bacteria 7967
9 Ga0070677_10001019 3300005333 Bacteria 9041
10 Ga0068869_100088605 3300005334 Bacteria 2323
11 Ga0070689_100018035 3300005340 Bacteria 5192
12 Ga0070691_10001160 3300005341 Bacteria 10988
13 Ga0070687_100076657 3300005343 Bacteria 1811
14 Ga0070668_100058353 3300005347 Bacteria 2985
15 Ga0070669_100030062 3300005353 Bacteria 3918
16 Ga0070675_100004330 3300005354 Bacteria 10826
17 Ga0070674_100086762 3300005356 Bacteria 2249
18 Ga0070688_100024211 3300005365 Bacteria 3579
19 Ga0070667_100234941 3300005367 Bacteria 1636
20 Ga0070700_100004634 3300005441 Bacteria 7201
21 Ga0070700_100139471 3300005441 Bacteria 1646
22 Ga0070694_100016161 3300005444 Bacteria 4697
23 Ga0070678_100119253 3300005456 Bacteria 2078
24 Ga0070678_100172148 3300005456 Bacteria 1764
25 Ga0070662_100040162 3300005457 Bacteria 3330
26 Ga0068867_100060799 3300005459 Bacteria 2803
27 Ga0068867_100121899 3300005459 Bacteria 2016
28 Ga0070685_10044446 3300005466 Bacteria 2543
29 Ga0070685_10159372 3300005466 Bacteria 1437
30 Ga0070699_100012071 3300005518 Bacteria 7454
31 Ga0070672_100006955 3300005543 Bacteria 7650
32 Ga0070696_100012154 3300005546 Bacteria 5770
33 Ga0070665_100003081 3300005548 Bacteria 17957
34 Ga0070704_100048428 3300005549 Bacteria 2975
35 Ga0068854_100027726 3300005578 Bacteria 3907
36 Ga0068859_100033723 3300005617 Bacteria 5140
37 Ga0068859_100045758 3300005617 Bacteria 4396
38 Ga0068864_100113796 3300005618 Unclassified 2412
39 Ga0068866_10011566 3300005718 Bacteria 3823
40 Ga0068863_100360196 3300005841 Bacteria 1418
41 Ga0068858_100074514 3300005842 Bacteria 3151
42 Ga0068858_100079791 3300005842 Bacteria 3040
43 Ga0068858_100107960 3300005842 Bacteria 2598
44 Ga0068860_100027715 3300005843 Bacteria 5455
45 Ga0081539_10034897 3300005985 Bacteria 3033
46 Ga0075368_10003270 3300006042 Bacteria 5396
47 Ga0075368_10015024 3300006042 Bacteria 2866
48 Ga0075362_10000489 3300006177 Bacteria 11538
49 Ga0075367_10009128 3300006178 Bacteria 5170
50 Ga0075366_10012749 3300006195 Bacteria 4775
51 Ga0097621_100023981 3300006237 Bacteria 4757
52 Ga0097621_100029706 3300006237 Bacteria 4320
53 Ga0075370_10011543 3300006353 Bacteria 4645
54 Ga0068871_100000309 3300006358 Bacteria 33960
55 Ga0068871_100085964 3300006358 Bacteria 2613
56 Ga0075428_100042956 3300006844 Bacteria 4970
57 Ga0075431_100069162 3300006847 Unclassified 3643
58 Ga0075433_10040318 3300006852 Bacteria 4042
59 Ga0075434_100000943 3300006871 Bacteria 23394
60 Ga0075434_100001704 3300006871 Bacteria 18818
61 Ga0075434_100047802 3300006871 Bacteria 4245
62 Ga0075434_100218820 3300006871 Bacteria 1924
63 Ga0075434_100253314 3300006871 Bacteria 1779
64 Ga0068865_100044438 3300006881 Bacteria 3041
65 Ga0068865_100054768 3300006881 Bacteria 2773
66 Ga0075436_100005845 3300006914 Bacteria 8451
67 Ga0075436_100008656 3300006914 Bacteria 6956
68 Ga0075436_100027748 3300006914 Bacteria 3897
69 Ga0075436_100093293 3300006914 Bacteria 2093
70 Ga0097620_100033724 3300006931 Bacteria 5140
71 Ga0097620_100045760 3300006931 Bacteria 4396
72 Ga0075435_100000911 3300007076 Bacteria 18610
73 Ga0075435_100010913 3300007076 Bacteria 6657
74 Ga0075435_100058881 3300007076 Bacteria 3112
75 Ga0075435_100096891 3300007076 Bacteria 2440
76 Ga0111539_10001119 3300009094 Bacteria 35455
77 Ga0111539_10055826 3300009094 Bacteria 4695
78 Ga0111539_10165574 3300009094 Bacteria 2585
79 Ga0111539_10213719 3300009094 Bacteria 2247
80 Ga0111539_10259584 3300009094 Bacteria 2023
81 Ga0111539_10316803 3300009094 Unclassified 1815
82 Ga0105245_10107633 3300009098 Bacteria 2588
83 Ga0114129_10002530 3300009147 Bacteria 25397
84 Ga0114129_10010826 3300009147 Bacteria 12996
85 Ga0114129_10063350 3300009147 Bacteria 5163
86 Ga0105243_10050813 3300009148 Bacteria 3277
87 Ga0105243_10180538 3300009148 Bacteria 1835
88 Ga0105242_10042859 3300009176 Bacteria 3657
89 Ga0105248_10016814 3300009177 Bacteria 8052
90 Ga0105248_10278313 3300009177 Bacteria 1884
91 Ga0105246_10140140 3300011119 Bacteria 1817
92 Ga0157378_10134090 3300013297 Bacteria 2295
93 Ga0163162_10193438 3300013306 Bacteria 2162
94 Ga0157375_10011334 3300013308 Bacteria 7871
95 Ga0163163_10039080 3300014325 Bacteria 4629
96 Ga0163163_10094081 3300014325 Bacteria 3014
97 Ga0163163_10127262 3300014325 Bacteria 2585
98 Ga0157380_10005987 3300014326 Bacteria 8510
99 Ga0157380_10067669 3300014326 Bacteria 2877
100 Ga0157379_10011179 3300014968 Bacteria 7824
101 Ga0157376_10075543 3300014969 Bacteria 2876
102 Ga0213876_10105147 3300021384 Bacteria 1498
103 Ga0207697_10039837 3300025315 Bacteria 1928
104 Ga0207682_10025565 3300025893 Bacteria 2342
105 Ga0207645_10011108 3300025907 Bacteria 6160
106 Ga0207645_10012156 3300025907 Bacteria 5847
107 Ga0207645_10017941 3300025907 Bacteria 4667
108 Ga0207654_10121325 3300025911 Bacteria 1642
109 Ga0207707_10122990 3300025912 Bacteria 2269
110 Ga0207662_10003200 3300025918 Bacteria 8383
111 Ga0207681_10046132 3300025923 Bacteria 2930
112 Ga0207650_10028707 3300025925 Bacteria 3992
113 Ga0207650_10048289 3300025925 Bacteria 3139
114 Ga0207659_10000072 3300025926 Bacteria 64525
115 Ga0207687_10009098 3300025927 Bacteria 6495
116 Ga0207700_10003078 3300025928 Bacteria 9625
117 Ga0207690_10160898 3300025932 Bacteria 1673
118 Ga0207706_10021337 3300025933 Bacteria 5819
119 Ga0207709_10015105 3300025935 Bacteria 4278
120 Ga0207709_10044025 3300025935 Bacteria 2695
121 Ga0207669_10159620 3300025937 Bacteria 1591
122 Ga0207704_10132063 3300025938 Unclassified 1731
123 Ga0207691_10001054 3300025940 Bacteria 27388
124 Ga0207691_10212088 3300025940 Bacteria 1682
125 Ga0207711_10031939 3300025941 Bacteria 4449
126 Ga0207711_10072866 3300025941 Bacteria 2984
127 Ga0207689_10014641 3300025942 Bacteria 6663
128 Ga0207689_10193335 3300025942 Bacteria 1679
129 Ga0207661_10001481 3300025944 Bacteria 15878
130 Ga0207651_10108197 3300025960 Bacteria 2080
131 Ga0207640_10057411 3300025981 Bacteria 2560
132 Ga0207677_10006222 3300026023 Bacteria 6527
133 Ga0207703_10008225 3300026035 Bacteria 8243
134 Ga0207703_10058167 3300026035 Bacteria 3154
135 Ga0207703_10116376 3300026035 Bacteria 2288
136 Ga0207703_10148656 3300026035 Unclassified 2041
137 Ga0207678_10035673 3300026067 Bacteria 4330
138 Ga0207708_10009239 3300026075 Bacteria 7298
139 Ga0207708_10259908 3300026075 Bacteria 1401
140 Ga0207648_10015816 3300026089 Bacteria 6917
141 Ga0207648_10129422 3300026089 Bacteria 2222
142 Ga0207648_10204545 3300026089 Bacteria 1752
143 Ga0207648_10340053 3300026089 Unclassified 1351
144 Ga0207676_10136151 3300026095 Bacteria 2096
145 Ga0209813_10008596 3300027866 Bacteria 2586
146 Ga0207428_10028520 3300027907 Bacteria 4636
147 Ga0268266_10034103 3300028379 Bacteria 4327
148 Ga0268265_10019011 3300028380 Bacteria 4770
149 Ga0268264_10035635 3300028381 Bacteria 4096
150 Ga0268264_10113387 3300028381 Bacteria 2378
151 Ga0307412_10044842 3300031911 Bacteria 2887
152 Ga0307409_100125791 3300031995 Bacteria 2180
153 Ga0307416_100068134 3300032002 Bacteria 2939
154 Ga0373955_0038579 3300035172 Bacteria 2546
155 Ga0373931_0010056 3300035691 Bacteria 4537
156 Ga0373947_0021292 3300035725 Bacteria 3752
157 Ga0373937_0246345 3300036401 Unclassified 1684
158 Ga0373925_0002232 3300037068 Bacteria 15727
159 Ga0373925_0056072 3300037068 Bacteria 2951
160 Ga0439434_0011722 3300042435 Bacteria 2593
161 Ga0451577_0038896 3300042876 Bacteria 4276
162 Ga0453684_0020035 3300044712 Bacteria 10130
163 Ga0495592_0043582 3300046454 Unclassified 3356
164 Ga0495630_0030124 3300046517 Bacteria 4035
165 Ga0495640_0166845 3300046533 Bacteria 1408
166 Ga0495667_0050826 3300046559 Unclassified 2736
167 Ga0495634_0152494 3300046642 Bacteria 1461
168 Ga0495658_0011794 3300046683 Bacteria 4407
169 Ga0495613_0018648 3300046689 Bacteria 5175
170 Ga0495604_0017753 3300047317 Bacteria 5693
171 Ga0495674_0127045 3300047319 Bacteria 2150
172 Ga0495674_0159446 3300047319 Bacteria 1888
173 Ga0495684_0000091 3300047471 Bacteria 63223
174 Ga0496100_0077476 3300048903 Unclassified 2235
175 Ga0496102_0098595 3300048905 Bacteria 2712
176 Ga0496103_0160045 3300048906 Unclassified 1444
177 Ga0496104_0020319 3300048907 Bacteria 6085
178 Ga0496106_0118159 3300048909 Bacteria 2070
179 Ga0496106_0210984 3300048909 Bacteria 1547
180 Ga0501034_0010134 3300049571 Bacteria 9832
181 Ga0501034_0313669 3300049571 Bacteria 1502
182 Ga0501036_0243431 3300049572 Bacteria 1508
183 Ga0501039_0074628 3300049575 Bacteria 2636
184 Ga0501040_0130445 3300049576 Bacteria 1767
185 Ga0501042_0105885 3300049578 Bacteria 2024
186 Ga0501043_0089773 3300049579 Bacteria 2416
187 Ga0501071_0004355 3300049587 Bacteria 8980
188 Ga0501071_0008080 3300049587 Bacteria 6940
189 Ga0501072_0003260 3300049588 Bacteria 12194
190 Ga0501072_0041729 3300049588 Bacteria 3604
191 Ga0501072_0042341 3300049588 Bacteria 3577
192 Ga0501072_0044490 3300049588 Bacteria 3491
193 Ga0501072_0048343 3300049588 Bacteria 3350
194 Ga0501075_0079872 3300049591 Bacteria 2476
195 Ga0501076_0025956 3300049592 Bacteria 4535
196 Ga0501076_0028190 3300049592 Bacteria 4358
197 Ga0501076_0103175 3300049592 Bacteria 2300
198 Ga0501079_0051416 3300049741 Bacteria 3182
199 Ga0501080_0168630 3300049742 Bacteria 2020
200 nmdc:mga03n38_28752_c1 3300050490 Bacteria 2320
201 nmdc:mga0k408_7377_c1 3300050493 Bacteria 5870
202 nmdc:mga0k408_8269_c1 3300050493 Bacteria 5581
203 nmdc:mga04h51_21792_c1 3300050495 Bacteria 1931
204 nmdc:mga05p37_1000_c1 3300050507 Bacteria 32217
205 nmdc:mga05p37_109341_c1 3300050507 Bacteria 3401
206 nmdc:mga05p37_140839_c1 3300050507 Bacteria 2955
207 nmdc:mga05p37_1976_c1 3300050507 Bacteria 23897
208 nmdc:mga05p37_19814_c1 3300050507 Bacteria 8139
209 nmdc:mga05p37_6316_c1 3300050507 Bacteria 13955
210 nmdc:mga09592_166649_c1 3300050508 Bacteria 1904
211 nmdc:mga09592_28535_c1 3300050508 Bacteria 4636
212 nmdc:mga08y16_5673_c1 3300050511 Bacteria 13079
213 nmdc:mga08y16_61068_c1 3300050511 Bacteria 3936
214 nmdc:mga0n895_11359_c1 3300050512 Bacteria 7940
215 nmdc:mga0n895_11471_c1 3300050512 Bacteria 7909
216 nmdc:mga0n895_11_c1 3300050512 Bacteria 112540
217 nmdc:mga0n895_39877_c1 3300050512 Bacteria 4560
218 nmdc:mga0rr50_13953_c1 3300050513 Bacteria 5250
219 nmdc:mga0rr50_19_c1 3300050513 Bacteria 158236
220 nmdc:mga0rr50_3113_c1 3300050513 Bacteria 9478
221 nmdc:mga08x19_26995_c1 3300050514 Bacteria 3589
222 nmdc:mga08x19_4710_c1 3300050514 Bacteria 8087
223 nmdc:mga08x19_684_c1 3300050514 Bacteria 21764
224 nmdc:mga0a205_43710_c1 3300050515 Bacteria 4318
225 nmdc:mga0a205_9054_c1 3300050515 Bacteria 9080
226 Ga0495601_0001700 3300053077 Bacteria 12158
227 Ga0495619_0017723 3300053085 Bacteria 4511
228 Ga0501084_0117726 3300054114 Bacteria 2234
229 Ga0501082_0020583 3300060353 Bacteria 5687
230 Ga0453684_0264681
231 JGI24751J29686_10002775
232 Ga0065712_10070616
233 Ga0065707_10004769
234 Ga0070676_10127988
235 Ga0070683_100002445
236 Ga0070690_100024878
237 Ga0070670_100010332
238 Ga0070677_10001019
239 Ga0068869_100088605
240 Ga0070689_100018035
241 Ga0070691_10001160
242 Ga0070687_100076657
243 Ga0070668_100058353
244 Ga0070669_100030062
245 Ga0070675_100004330
246 Ga0070674_100086762
247 Ga0070688_100024211
248 Ga0070667_100234941
249 Ga0070700_100004634
250 Ga0070700_100139471
251 Ga0070694_100016161
252 Ga0070678_100119253
253 Ga0070678_100172148
254 Ga0070662_100040162
255 Ga0068867_100060799
256 Ga0068867_100121899
257 Ga0070685_10044446
258 Ga0070685_10159372
259 Ga0070699_100012071
260 Ga0070672_100006955
261 Ga0070696_100012154
262 Ga0070665_100003081
263 Ga0070704_100048428
264 Ga0068854_100027726
265 Ga0068859_100033723
266 Ga0068859_100045758
267 Ga0068864_100113796
268 Ga0068866_10011566
269 Ga0068863_100360196
270 Ga0068858_100074514
271 Ga0068858_100079791
272 Ga0068858_100107960
273 Ga0068860_100027715
274 Ga0081539_10034897
275 Ga0075368_10003270
276 Ga0075368_10015024
277 Ga0075362_10000489
278 Ga0075367_10009128
279 Ga0075366_10012749
280 Ga0097621_100023981
281 Ga0097621_100029706
282 Ga0075370_10011543
283 Ga0068871_100000309
284 Ga0068871_100085964
285 Ga0075428_100042956
286 Ga0075431_100069162
287 Ga0075433_10040318
288 Ga0075434_100000943
289 Ga0075434_100001704
290 Ga0075434_100047802
291 Ga0075434_100218820
292 Ga0075434_100253314
293 Ga0068865_100044438
294 Ga0068865_100054768
295 Ga0075436_100005845
296 Ga0075436_100008656
297 Ga0075436_100027748
298 Ga0075436_100093293
299 Ga0097620_100033724
300 Ga0097620_100045760
301 Ga0075435_100000911
302 Ga0075435_100010913
303 Ga0075435_100058881
304 Ga0075435_100096891
305 Ga0111539_10001119
306 Ga0111539_10055826
307 Ga0111539_10165574
308 Ga0111539_10213719
309 Ga0111539_10259584
310 Ga0111539_10316803
311 Ga0105245_10107633
312 Ga0114129_10002530
313 Ga0114129_10010826
314 Ga0114129_10063350
315 Ga0105243_10050813
316 Ga0105243_10180538
317 Ga0105242_10042859
318 Ga0105248_10016814
319 Ga0105248_10278313
320 Ga0105246_10140140
321 Ga0157378_10134090
322 Ga0163162_10193438
323 Ga0157375_10011334
324 Ga0163163_10039080
325 Ga0163163_10094081
326 Ga0163163_10127262
327 Ga0157380_10005987
328 Ga0157380_10067669
329 Ga0157379_10011179
330 Ga0157376_10075543
331 Ga0213876_10105147
332 Ga0207697_10039837
333 Ga0207682_10025565
334 Ga0207645_10011108
335 Ga0207645_10012156
336 Ga0207645_10017941
337 Ga0207654_10121325
338 Ga0207707_10122990
339 Ga0207662_10003200
340 Ga0207681_10046132
341 Ga0207650_10028707
342 Ga0207650_10048289
343 Ga0207659_10000072
344 Ga0207687_10009098
345 Ga0207700_10003078
346 Ga0207690_10160898
347 Ga0207706_10021337
348 Ga0207709_10015105
349 Ga0207709_10044025
350 Ga0207669_10159620
351 Ga0207704_10132063
352 Ga0207691_10001054
353 Ga0207691_10212088
354 Ga0207711_10031939
355 Ga0207711_10072866
356 Ga0207689_10014641
357 Ga0207689_10193335
358 Ga0207661_10001481
359 Ga0207651_10108197
360 Ga0207640_10057411
361 Ga0207677_10006222
362 Ga0207703_10008225
363 Ga0207703_10058167
364 Ga0207703_10116376
365 Ga0207703_10148656
366 Ga0207678_10035673
367 Ga0207708_10009239
368 Ga0207708_10259908
369 Ga0207648_10015816
370 Ga0207648_10129422
371 Ga0207648_10204545
372 Ga0207648_10340053
373 Ga0207676_10136151
374 Ga0209813_10008596
375 Ga0207428_10028520
376 Ga0268266_10034103
377 Ga0268265_10019011
378 Ga0268264_10035635
379 Ga0268264_10113387
380 Ga0307412_10044842
381 Ga0307409_100125791
382 Ga0307416_100068134
383 Ga0373955_0038579
384 Ga0373931_0010056
385 Ga0373947_0021292
386 Ga0373937_0246345
387 Ga0373925_0002232
388 Ga0373925_0056072
389 Ga0439434_0011722
390 Ga0451577_0038896
391 Ga0453684_0020035
392 Ga0495592_0043582
393 Ga0495630_0030124
394 Ga0495640_0166845
395 Ga0495667_0050826
396 Ga0495634_0152494
397 Ga0495658_0011794
398 Ga0495613_0018648
399 Ga0495604_0017753
400 Ga0495674_0127045
401 Ga0495674_0159446
402 Ga0495684_0000091
403 Ga0496100_0077476
404 Ga0496102_0098595
405 Ga0496103_0160045
406 Ga0496104_0020319
407 Ga0496106_0118159
408 Ga0496106_0210984
409 Ga0501034_0010134
410 Ga0501034_0313669
411 Ga0501036_0243431
412 Ga0501039_0074628
413 Ga0501040_0130445
414 Ga0501042_0105885
415 Ga0501043_0089773
416 Ga0501071_0004355
417 Ga0501071_0008080
418 Ga0501072_0003260
419 Ga0501072_0041729
420 Ga0501072_0042341
421 Ga0501072_0044490
422 Ga0501072_0048343
423 Ga0501075_0079872
424 Ga0501076_0025956
425 Ga0501076_0028190
426 Ga0501076_0103175
427 Ga0501079_0051416
428 Ga0501080_0168630
429 nmdc:mga03n38_28752_c1
430 nmdc:mga0k408_7377_c1
431 nmdc:mga0k408_8269_c1
432 nmdc:mga04h51_21792_c1
433 nmdc:mga05p37_1000_c1
434 nmdc:mga05p37_109341_c1
435 nmdc:mga05p37_140839_c1
436 nmdc:mga05p37_1976_c1
437 nmdc:mga05p37_19814_c1
438 nmdc:mga05p37_6316_c1
439 nmdc:mga09592_166649_c1
440 nmdc:mga09592_28535_c1
441 nmdc:mga08y16_5673_c1
442 nmdc:mga08y16_61068_c1
443 nmdc:mga0n895_11359_c1
444 nmdc:mga0n895_11471_c1
445 nmdc:mga0n895_11_c1
446 nmdc:mga0n895_39877_c1
447 nmdc:mga0rr50_13953_c1
448 nmdc:mga0rr50_19_c1
449 nmdc:mga0rr50_3113_c1
450 nmdc:mga08x19_26995_c1
451 nmdc:mga08x19_4710_c1
452 nmdc:mga08x19_684_c1
453 nmdc:mga0a205_43710_c1
454 nmdc:mga0a205_9054_c1
455 Ga0495601_0001700
456 Ga0495619_0017723
457 Ga0501084_0117726
458 Ga0501082_0020583

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02784

Orn_Arg_deC_N

Pyridoxal-dependent decarboxylase, pyridoxal binding domain

60

306

0.96

PF01168

Ala_racemase_N

Alanine racemase, N-terminal domain

60

271

0.82

PF00278

Orn_DAP_Arg_deC

Pyridoxal-dependent decarboxylase, C-terminal sheet domain

55

396

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
2qgh-assembly1.cif.gz_A-2 crystal structure of diaminopimelate decarboxylase from helicobacter pylori complexed with l-lysine 0.9669 21 413
3c5q-assembly1.cif.gz_A-2 crystal structure of diaminopimelate decarboxylase (i148l mutant) from helicobacter pylori complexed with l-lysine 0.9666 21 413
2p3e-assembly1.cif.gz_B crystal structure of aq1208 from aquifex aeolicus 0.9659 6 413
2p3e-assembly1.cif.gz_A crystal structure of aq1208 from aquifex aeolicus 0.9552 6 413
2qgh-assembly1.cif.gz_A-2 crystal structure of diaminopimelate decarboxylase from helicobacter pylori complexed with l-lysine 0.9501 21 413
ID Description Score Start End Superfamily
af_Q58497_297_438_2.40.37.10 Mainly Beta;Beta Barrel;Lyase, Ornithine Decarboxylase; Chain A, domain 1;Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.9612 278 415 2.40.37.10
3c5qA01 Mainly Beta;Beta Barrel;Lyase, Ornithine Decarboxylase; Chain A, domain 1;Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.9603 277 402 2.40.37.10
2qghA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9573 39 276 3.20.20.10
1twiC01 Mainly Beta;Beta Barrel;Lyase, Ornithine Decarboxylase; Chain A, domain 1;Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.9508 277 415 2.40.37.10
af_Q2FYN4_284_419_2.40.37.10 Mainly Beta;Beta Barrel;Lyase, Ornithine Decarboxylase; Chain A, domain 1;Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.9507 280 412 2.40.37.10
ID Description Score Start End GO Terms
AF-A0A7V8WDT3-F1-model_v4 Diaminopimelate decarboxylase (DAP decarboxylase) (DAPDC) (EC 4.1.1.20) 0.9776 4 414 GO:0008836
GO:0009089
GO:0030170
AF-A0A382NUB1-F1-model_v4 Diaminopimelate decarboxylase 0.9768 179 414 GO:0008836
GO:0009089
AF-A0A2V8HWM1-F1-model_v4 Multifunctional fusion protein [Includes: Diaminopimelate decarboxylase (DAP decarboxylase) (DAPDC) (EC 4.1.1.20); Thymidylate kinase (EC 2.7.4.9) (dTMP kinase)] 0.9717 4 359 GO:0004798
GO:0005524
GO:0006233
GO:0006235
GO:0008836
GO:0009089
GO:0030170
AF-A0A4Q6FLQ6-F1-model_v4 Diaminopimelate decarboxylase (EC 4.1.1.20) 0.9707 18 415 GO:0008836
GO:0009089
AF-A0A7V8WDT3-F1-model_v4 Diaminopimelate decarboxylase (DAP decarboxylase) (DAPDC) (EC 4.1.1.20) 0.9706 4 414 GO:0008836
GO:0009089
GO:0030170

Map