F342241

General Info

Members Datasets Scaffolds Average Seq Length
229 90 458 169

Family's Representative Sequence

Representative Sequence 3300041494|Ga0451837_1422128|Ga0451837_1422128_322_921
Length 199
Sequence VTSTAGPGYEPREEDPRVVPTFDPHDPVWRQDFPISSAGEDEVTRREFVRFLVVASGGFAAGNVGVALWSSLRSINEGEPRSIVPLADVPEGTAHLFRYPTADDPAILVHLPGGELRAFSQKCTHLGCVVYYQPGTQDMECPCHEGHFDAESGDVVSGPPQRPLGRIDVEVREGTVWALANRGESSGRRGAEVDGGEGP

Samples

Sample ID Description Type Environment
1 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
2 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
3 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
4 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
5 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
6 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
7 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
8 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
9 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
10 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
11 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
12 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
13 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
14 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
15 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
16 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
17 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
18 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
19 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
20 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
21 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
22 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
24 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
25 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
26 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
27 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
28 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
39 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
40 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
41 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
42 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
43 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
44 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
45 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
46 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
47 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
48 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
49 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
50 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
51 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
52 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
53 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
54 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
55 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
56 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
57 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
58 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
59 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
60 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
61 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
62 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
63 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
64 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
65 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
66 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
67 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
68 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
69 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
70 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
71 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
72 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
73 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
74 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
75 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
76 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
77 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
78 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
80 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
81 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
82 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
83 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
84 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
85 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
86 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
87 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
88 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
89 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
90 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.42
Nodule 0
Rhizoplane 0.87
Rhizosphere 90.83
Stem 0
Stem Tuber 0
Unclassified 9.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451837_1422128 3300041494 Bacteria 2994
2 Ga0070668_100021949 3300005347 Bacteria 4823
3 Ga0070662_100102421 3300005457 Unclassified 2169
4 Ga0070679_100185361 3300005530 Bacteria 2052
5 Ga0070679_101155135 3300005530 Bacteria 719
6 Ga0068861_100003174 3300005719 Bacteria 10874
7 Ga0068861_101386087 3300005719 Bacteria 686
8 Ga0068862_100044889 3300005844 Bacteria 3770
9 Ga0081455_10001526 3300005937 Bacteria 28538
10 Ga0081455_10023110 3300005937 Bacteria 5791
11 Ga0081455_10035475 3300005937 Bacteria 4456
12 Ga0081455_10157161 3300005937 Unclassified 1746
13 Ga0081455_10467236 3300005937 Bacteria 857
14 Ga0075365_10004530 3300006038 Bacteria 7377
15 Ga0075368_10036004 3300006042 Unclassified 1933
16 Ga0075363_100021101 3300006048 Bacteria 3276
17 Ga0075364_10010469 3300006051 Bacteria 5603
18 Ga0075364_10036332 3300006051 Bacteria 3184
19 Ga0075364_10187429 3300006051 Bacteria 1401
20 Ga0075362_10038780 3300006177 Bacteria 2093
21 Ga0075367_10057456 3300006178 Unclassified 2313
22 Ga0075367_10233425 3300006178 Unclassified 1152
23 Ga0075370_10139506 3300006353 Bacteria 1417
24 Ga0075370_10146569 3300006353 Bacteria 1382
25 Ga0075428_100074252 3300006844 Bacteria 3714
26 Ga0075428_100221906 3300006844 Bacteria 2041
27 Ga0075430_100043854 3300006846 Bacteria 3782
28 Ga0075430_100121806 3300006846 Bacteria 2174
29 Ga0075431_100667896 3300006847 Bacteria 1019
30 Ga0075431_100708847 3300006847 Unclassified 984
31 Ga0075429_100062285 3300006880 Bacteria 3250
32 Ga0075429_100448214 3300006880 Bacteria 1131
33 Ga0068865_100801907 3300006881 Unclassified 812
34 Ga0111539_10073970 3300009094 Bacteria 4016
35 Ga0111539_11375094 3300009094 Bacteria 819
36 Ga0105245_10029115 3300009098 Bacteria 4877
37 Ga0114129_10072902 3300009147 Bacteria 4785
38 Ga0114129_10243502 3300009147 Bacteria 2417
39 Ga0105243_11100687 3300009148 Unclassified 803
40 Ga0105238_10709041 3300009551 Unclassified 1018
41 Ga0105249_10030324 3300009553 Bacteria 4889
42 Ga0157375_11109174 3300013308 Bacteria 926
43 Ga0157380_10052858 3300014326 Bacteria 3218
44 Ga0207652_10526933 3300025921 Bacteria 1063
45 Ga0207694_10456152 3300025924 Unclassified 1067
46 Ga0207706_10133378 3300025933 Unclassified 2184
47 Ga0207691_10581967 3300025940 Bacteria 948
48 Ga0207651_10903228 3300025960 Unclassified 787
49 Ga0207712_10021201 3300025961 Bacteria 4263
50 Ga0207668_10011294 3300025972 Bacteria 5421
51 Ga0207708_10268830 3300026075 Bacteria 1378
52 Ga0207675_101011007 3300026118 Bacteria 850
53 Ga0268265_10664089 3300028380 Bacteria 1003
54 Ga0307413_10800784 3300031824 Bacteria 792
55 Ga0307410_11094122 3300031852 Bacteria 691
56 Ga0373933_0260976 3300035724 Bacteria 1117
57 Ga0373925_0028550 3300037068 Bacteria 4088
58 Ga0395901_0428896 3300038443 Bacteria 1355
59 Ga0451797_0007704 3300041453 Bacteria 1174
60 Ga0451853_1899909 3300041512 Bacteria 1060
61 Ga0495580_0011537 3300046472 Bacteria 6836
62 Ga0495583_0228178 3300046506 Bacteria 751
63 Ga0496114_0359921 3300048917 Bacteria 1287
64 Ga0501031_0051563 3300049568 Bacteria 2680
65 Ga0501031_0132082 3300049568 Bacteria 1631
66 Ga0501031_0305301 3300049568 Unclassified 1031
67 Ga0501032_0094125 3300049569 Unclassified 1987
68 Ga0501032_0183163 3300049569 Bacteria 1371
69 Ga0501033_0000814 3300049570 Bacteria 28538
70 Ga0501033_0005807 3300049570 Bacteria 9712
71 Ga0501034_0002345 3300049571 Bacteria 23113
72 Ga0501034_0003301 3300049571 Bacteria 18425
73 Ga0501034_0016308 3300049571 Bacteria 7627
74 Ga0501034_0026559 3300049571 Bacteria 5896
75 Ga0501034_0164134 3300049571 Bacteria 2191
76 Ga0501034_0203533 3300049571 Bacteria 1937
77 Ga0501036_0080874 3300049572 Bacteria 2746
78 Ga0501036_0104846 3300049572 Bacteria 2391
79 Ga0501036_0178248 3300049572 Bacteria 1789
80 Ga0501036_0408476 3300049572 Bacteria 1132
81 Ga0501036_0641668 3300049572 Bacteria 879
82 Ga0501037_0013511 3300049573 Bacteria 6012
83 Ga0501038_0012115 3300049574 Bacteria 7877
84 Ga0501038_0090903 3300049574 Bacteria 2558
85 Ga0501038_0461373 3300049574 Bacteria 976
86 Ga0501038_0464392 3300049574 Bacteria 972
87 Ga0501038_0737985 3300049574 Bacteria 735
88 Ga0501039_0074101 3300049575 Bacteria 2645
89 Ga0501039_0239729 3300049575 Bacteria 1426
90 Ga0501040_0079095 3300049576 Bacteria 2276
91 Ga0501040_0123111 3300049576 Unclassified 1820
92 Ga0501040_0356243 3300049576 Bacteria 1048
93 Ga0501041_0010301 3300049577 Bacteria 5508
94 Ga0501041_0050432 3300049577 Bacteria 2537
95 Ga0501041_0184262 3300049577 Unclassified 1307
96 Ga0501041_0476710 3300049577 Bacteria 793
97 Ga0501042_0004290 3300049578 Bacteria 9079
98 Ga0501042_0018261 3300049578 Bacteria 4855
99 Ga0501042_0060328 3300049578 Bacteria 2709
100 Ga0501042_0062455 3300049578 Bacteria 2662
101 Ga0501042_0085604 3300049578 Bacteria 2260
102 Ga0501042_0535389 3300049578 Bacteria 851
103 Ga0501043_0004454 3300049579 Bacteria 11383
104 Ga0501043_0010648 3300049579 Bacteria 7204
105 Ga0501043_0533422 3300049579 Bacteria 874
106 Ga0501046_0065911 3300049580 Bacteria 2824
107 Ga0501046_0471905 3300049580 Bacteria 901
108 Ga0501046_0696632 3300049580 Bacteria 716
109 Ga0501047_0105390 3300049581 Bacteria 2700
110 Ga0501047_0422017 3300049581 Bacteria 1165
111 Ga0501048_0025968 3300049582 Bacteria 4266
112 Ga0501048_0040052 3300049582 Bacteria 3359
113 Ga0501048_0045112 3300049582 Bacteria 3150
114 Ga0501048_0091566 3300049582 Bacteria 2145
115 Ga0501048_0158693 3300049582 Bacteria 1600
116 Ga0501048_0423589 3300049582 Bacteria 952
117 Ga0501068_0008587 3300049584 Bacteria 5691
118 Ga0501068_0166312 3300049584 Unclassified 1391
119 Ga0501068_0324416 3300049584 Bacteria 987
120 Ga0501068_0402303 3300049584 Bacteria 883
121 Ga0501068_0420128 3300049584 Bacteria 863
122 Ga0501069_0001135 3300049585 Bacteria 12850
123 Ga0501070_0028995 3300049586 Bacteria 4641
124 Ga0501070_0051763 3300049586 Bacteria 3407
125 Ga0501070_0367604 3300049586 Bacteria 1166
126 Ga0501071_0000564 3300049587 Bacteria 19132
127 Ga0501071_0089914 3300049587 Bacteria 2254
128 Ga0501071_0115265 3300049587 Bacteria 1988
129 Ga0501071_0166012 3300049587 Bacteria 1652
130 Ga0501071_0436705 3300049587 Unclassified 1001
131 Ga0501071_0444382 3300049587 Bacteria 992
132 Ga0501071_0999489 3300049587 Bacteria 646
133 Ga0501072_0004163 3300049588 Bacteria 10950
134 Ga0501072_0010045 3300049588 Bacteria 7202
135 Ga0501072_0061224 3300049588 Bacteria 2968
136 Ga0501072_0150516 3300049588 Bacteria 1855
137 Ga0501072_0411854 3300049588 Bacteria 1072
138 Ga0501072_0446390 3300049588 Bacteria 1025
139 Ga0501072_0524555 3300049588 Bacteria 936
140 Ga0501072_1087138 3300049588 Bacteria 622
141 Ga0501073_0003595 3300049589 Bacteria 11656
142 Ga0501073_0156909 3300049589 Bacteria 1577
143 Ga0501073_0226080 3300049589 Unclassified 1293
144 Ga0501074_0012673 3300049590 Bacteria 6132
145 Ga0501074_0021271 3300049590 Bacteria 4711
146 Ga0501074_0033699 3300049590 Bacteria 3712
147 Ga0501074_0140187 3300049590 Bacteria 1730
148 Ga0501074_0209624 3300049590 Bacteria 1388
149 Ga0501074_0312576 3300049590 Bacteria 1116
150 Ga0501074_0605117 3300049590 Bacteria 775
151 Ga0501075_0008393 3300049591 Bacteria 7205
152 Ga0501075_0195107 3300049591 Bacteria 1544
153 Ga0501075_0248507 3300049591 Bacteria 1356
154 Ga0501076_0009727 3300049592 Bacteria 7102
155 Ga0501076_0015421 3300049592 Bacteria 5773
156 Ga0501076_0019114 3300049592 Bacteria 5231
157 Ga0501076_0076704 3300049592 Bacteria 2681
158 Ga0501076_0242557 3300049592 Bacteria 1474
159 Ga0501076_0244030 3300049592 Bacteria 1470
160 Ga0501076_0279914 3300049592 Bacteria 1366
161 Ga0501076_0487434 3300049592 Bacteria 1016
162 Ga0501076_1027980 3300049592 Bacteria 679
163 Ga0501077_0002856 3300049593 Bacteria 10359
164 Ga0501077_0130893 3300049593 Bacteria 1591
165 Ga0501077_0138671 3300049593 Bacteria 1542
166 Ga0501077_0156382 3300049593 Unclassified 1447
167 Ga0501077_0355499 3300049593 Bacteria 935
168 Ga0501079_0017954 3300049741 Bacteria 5401
169 Ga0501079_0018460 3300049741 Bacteria 5330
170 Ga0501079_0184277 3300049741 Bacteria 1630
171 Ga0501079_0246281 3300049741 Bacteria 1397
172 Ga0501079_0316126 3300049741 Unclassified 1222
173 Ga0501079_0347720 3300049741 Bacteria 1161
174 Ga0501079_0756423 3300049741 Bacteria 765
175 Ga0501080_0033745 3300049742 Bacteria 4777
176 Ga0501080_0058350 3300049742 Bacteria 3593
177 Ga0501080_0173401 3300049742 Unclassified 1988
178 Ga0501080_0179037 3300049742 Bacteria 1952
179 Ga0501080_0569907 3300049742 Bacteria 1007
180 Ga0501081_0015872 3300049743 Bacteria 4972
181 Ga0501081_0074781 3300049743 Bacteria 2364
182 Ga0501081_0757105 3300049743 Bacteria 730
183 Ga0501083_0007227 3300049744 Bacteria 7884
184 Ga0501083_0050073 3300049744 Bacteria 2813
185 Ga0501035_0054060 3300049822 Bacteria 3589
186 Ga0501044_0001495 3300049823 Bacteria 27381
187 Ga0501044_0025983 3300049823 Bacteria 6203
188 Ga0501044_0104901 3300049823 Bacteria 2840
189 Ga0501045_0010985 3300049824 Bacteria 6344
190 Ga0501045_0021253 3300049824 Bacteria 4641
191 Ga0501045_0202908 3300049824 Bacteria 1477
192 Ga0501045_0529086 3300049824 Bacteria 875
193 nmdc:mga00v17_50271_c1 3300050491 Bacteria 2532
194 nmdc:mga00v17_62889_c1 3300050491 Bacteria 2285
195 nmdc:mga0yw44_120368_c1 3300050492 Bacteria 1690
196 nmdc:mga0yw44_39795_c1 3300050492 Bacteria 2790
197 nmdc:mga06z11_57097_c1 3300050494 Bacteria 2021
198 nmdc:mga05p37_271923_c1 3300050507 Bacteria 2024
199 nmdc:mga05p37_76117_c1 3300050507 Bacteria 4132
200 nmdc:mga09592_301361_c1 3300050508 Bacteria 1390
201 nmdc:mga09592_479963_c1 3300050508 Bacteria 1071
202 nmdc:mga06r32_166760_c1 3300050510 Bacteria 2186
203 nmdc:mga06r32_399864_c1 3300050510 Bacteria 1356
204 nmdc:mga08y16_2155_c1 3300050511 Bacteria 20196
205 nmdc:mga08y16_926014_c1 3300050511 Bacteria 856
206 Ga0500555_037789 3300053103 Bacteria 1352
207 Ga0501084_0000065 3300054114 Bacteria 81183
208 Ga0501084_0024944 3300054114 Bacteria 4989
209 Ga0501084_0033846 3300054114 Bacteria 4274
210 Ga0501084_0077193 3300054114 Bacteria 2793
211 Ga0501084_0101166 3300054114 Bacteria 2420
212 Ga0501084_0152664 3300054114 Bacteria 1947
213 Ga0501084_0290468 3300054114 Bacteria 1381
214 Ga0501084_0528586 3300054114 Bacteria 997
215 Ga0501082_0009465 3300060353 Bacteria 8389
216 Ga0501082_0107303 3300060353 Bacteria 2416
217 Ga0501082_0211328 3300060353 Bacteria 1688
218 Ga0501082_0215941 3300060353 Bacteria 1669
219 Ga0501082_0335248 3300060353 Bacteria 1318
220 Ga0501082_0444233 3300060353 Bacteria 1133
221 Ga0501082_0827605 3300060353 Bacteria 810
222 Ga0530510_0004158 3300061734 Bacteria 9986
223 Ga0530510_0010158 3300061734 Bacteria 6598
224 Ga0530510_0016578 3300061734 Bacteria 5216
225 Ga0530510_0078448 3300061734 Bacteria 2401
226 Ga0530510_0151029 3300061734 Bacteria 1715
227 Ga0530510_0175341 3300061734 Bacteria 1589
228 Ga0530510_0563858 3300061734 Bacteria 865
229 Ga0530510_0607786 3300061734 Bacteria 832
230 Ga0451837_1422128
231 Ga0070668_100021949
232 Ga0070662_100102421
233 Ga0070679_100185361
234 Ga0070679_101155135
235 Ga0068861_100003174
236 Ga0068861_101386087
237 Ga0068862_100044889
238 Ga0081455_10001526
239 Ga0081455_10023110
240 Ga0081455_10035475
241 Ga0081455_10157161
242 Ga0081455_10467236
243 Ga0075365_10004530
244 Ga0075368_10036004
245 Ga0075363_100021101
246 Ga0075364_10010469
247 Ga0075364_10036332
248 Ga0075364_10187429
249 Ga0075362_10038780
250 Ga0075367_10057456
251 Ga0075367_10233425
252 Ga0075370_10139506
253 Ga0075370_10146569
254 Ga0075428_100074252
255 Ga0075428_100221906
256 Ga0075430_100043854
257 Ga0075430_100121806
258 Ga0075431_100667896
259 Ga0075431_100708847
260 Ga0075429_100062285
261 Ga0075429_100448214
262 Ga0068865_100801907
263 Ga0111539_10073970
264 Ga0111539_11375094
265 Ga0105245_10029115
266 Ga0114129_10072902
267 Ga0114129_10243502
268 Ga0105243_11100687
269 Ga0105238_10709041
270 Ga0105249_10030324
271 Ga0157375_11109174
272 Ga0157380_10052858
273 Ga0207652_10526933
274 Ga0207694_10456152
275 Ga0207706_10133378
276 Ga0207691_10581967
277 Ga0207651_10903228
278 Ga0207712_10021201
279 Ga0207668_10011294
280 Ga0207708_10268830
281 Ga0207675_101011007
282 Ga0268265_10664089
283 Ga0307413_10800784
284 Ga0307410_11094122
285 Ga0373933_0260976
286 Ga0373925_0028550
287 Ga0395901_0428896
288 Ga0451797_0007704
289 Ga0451853_1899909
290 Ga0495580_0011537
291 Ga0495583_0228178
292 Ga0496114_0359921
293 Ga0501031_0051563
294 Ga0501031_0132082
295 Ga0501031_0305301
296 Ga0501032_0094125
297 Ga0501032_0183163
298 Ga0501033_0000814
299 Ga0501033_0005807
300 Ga0501034_0002345
301 Ga0501034_0003301
302 Ga0501034_0016308
303 Ga0501034_0026559
304 Ga0501034_0164134
305 Ga0501034_0203533
306 Ga0501036_0080874
307 Ga0501036_0104846
308 Ga0501036_0178248
309 Ga0501036_0408476
310 Ga0501036_0641668
311 Ga0501037_0013511
312 Ga0501038_0012115
313 Ga0501038_0090903
314 Ga0501038_0461373
315 Ga0501038_0464392
316 Ga0501038_0737985
317 Ga0501039_0074101
318 Ga0501039_0239729
319 Ga0501040_0079095
320 Ga0501040_0123111
321 Ga0501040_0356243
322 Ga0501041_0010301
323 Ga0501041_0050432
324 Ga0501041_0184262
325 Ga0501041_0476710
326 Ga0501042_0004290
327 Ga0501042_0018261
328 Ga0501042_0060328
329 Ga0501042_0062455
330 Ga0501042_0085604
331 Ga0501042_0535389
332 Ga0501043_0004454
333 Ga0501043_0010648
334 Ga0501043_0533422
335 Ga0501046_0065911
336 Ga0501046_0471905
337 Ga0501046_0696632
338 Ga0501047_0105390
339 Ga0501047_0422017
340 Ga0501048_0025968
341 Ga0501048_0040052
342 Ga0501048_0045112
343 Ga0501048_0091566
344 Ga0501048_0158693
345 Ga0501048_0423589
346 Ga0501068_0008587
347 Ga0501068_0166312
348 Ga0501068_0324416
349 Ga0501068_0402303
350 Ga0501068_0420128
351 Ga0501069_0001135
352 Ga0501070_0028995
353 Ga0501070_0051763
354 Ga0501070_0367604
355 Ga0501071_0000564
356 Ga0501071_0089914
357 Ga0501071_0115265
358 Ga0501071_0166012
359 Ga0501071_0436705
360 Ga0501071_0444382
361 Ga0501071_0999489
362 Ga0501072_0004163
363 Ga0501072_0010045
364 Ga0501072_0061224
365 Ga0501072_0150516
366 Ga0501072_0411854
367 Ga0501072_0446390
368 Ga0501072_0524555
369 Ga0501072_1087138
370 Ga0501073_0003595
371 Ga0501073_0156909
372 Ga0501073_0226080
373 Ga0501074_0012673
374 Ga0501074_0021271
375 Ga0501074_0033699
376 Ga0501074_0140187
377 Ga0501074_0209624
378 Ga0501074_0312576
379 Ga0501074_0605117
380 Ga0501075_0008393
381 Ga0501075_0195107
382 Ga0501075_0248507
383 Ga0501076_0009727
384 Ga0501076_0015421
385 Ga0501076_0019114
386 Ga0501076_0076704
387 Ga0501076_0242557
388 Ga0501076_0244030
389 Ga0501076_0279914
390 Ga0501076_0487434
391 Ga0501076_1027980
392 Ga0501077_0002856
393 Ga0501077_0130893
394 Ga0501077_0138671
395 Ga0501077_0156382
396 Ga0501077_0355499
397 Ga0501079_0017954
398 Ga0501079_0018460
399 Ga0501079_0184277
400 Ga0501079_0246281
401 Ga0501079_0316126
402 Ga0501079_0347720
403 Ga0501079_0756423
404 Ga0501080_0033745
405 Ga0501080_0058350
406 Ga0501080_0173401
407 Ga0501080_0179037
408 Ga0501080_0569907
409 Ga0501081_0015872
410 Ga0501081_0074781
411 Ga0501081_0757105
412 Ga0501083_0007227
413 Ga0501083_0050073
414 Ga0501035_0054060
415 Ga0501044_0001495
416 Ga0501044_0025983
417 Ga0501044_0104901
418 Ga0501045_0010985
419 Ga0501045_0021253
420 Ga0501045_0202908
421 Ga0501045_0529086
422 nmdc:mga00v17_50271_c1
423 nmdc:mga00v17_62889_c1
424 nmdc:mga0yw44_120368_c1
425 nmdc:mga0yw44_39795_c1
426 nmdc:mga06z11_57097_c1
427 nmdc:mga05p37_271923_c1
428 nmdc:mga05p37_76117_c1
429 nmdc:mga09592_301361_c1
430 nmdc:mga09592_479963_c1
431 nmdc:mga06r32_166760_c1
432 nmdc:mga06r32_399864_c1
433 nmdc:mga08y16_2155_c1
434 nmdc:mga08y16_926014_c1
435 Ga0500555_037789
436 Ga0501084_0000065
437 Ga0501084_0024944
438 Ga0501084_0033846
439 Ga0501084_0077193
440 Ga0501084_0101166
441 Ga0501084_0152664
442 Ga0501084_0290468
443 Ga0501084_0528586
444 Ga0501082_0009465
445 Ga0501082_0107303
446 Ga0501082_0211328
447 Ga0501082_0215941
448 Ga0501082_0335248
449 Ga0501082_0444233
450 Ga0501082_0827605
451 Ga0530510_0004158
452 Ga0530510_0010158
453 Ga0530510_0016578
454 Ga0530510_0078448
455 Ga0530510_0151029
456 Ga0530510_0175341
457 Ga0530510_0563858
458 Ga0530510_0607786

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00355

Rieske

Rieske [2Fe-2S] domain

80

173

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
1g8j-assembly1.cif.gz_B crystal structure analysis of arsenite oxidase from alcaligenes faecalis 0.58 65 168
5nqd-assembly2.cif.gz_D arsenite oxidase aioab from rhizobium sp. str. nt-26 mutant aiobf108a 0.5656 67 168
8cgs-assembly1.cif.gz_B crystal structure of arsenite oxidase from alcaligenes faecalis (af aio) bound to antimony oxyanion 0.5588 60 171
8ed4-assembly1.cif.gz_D structure of the complex between the arsenite oxidase and its native electron acceptor cytochrome c552 from pseudorhizobium sp. str. nt-26 0.5579 61 168
1g8k-assembly1.cif.gz_B crystal structure analysis of arsenite oxidase from alcaligenes faecalis 0.5533 60 171
ID Description Score Start End Superfamily
3gkqC02 Mainly Beta;Single Sheet;N-terminal domain of TfIIb; 0.8638 65 167 2.20.25.680
3gkqC02 Mainly Beta;Single Sheet;N-terminal domain of TfIIb; 0.8104 65 167 2.20.25.680
1z01A02 Mainly Beta;Single Sheet;N-terminal domain of TfIIb; 0.7897 65 170 2.20.25.680
1z01A02 Mainly Beta;Single Sheet;N-terminal domain of TfIIb; 0.7448 65 170 2.20.25.680
af_Q4CYC8_31_284_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.7369 117 148 2.130.10.10
ID Description Score Start End GO Terms
AF-A0A535QCV9-F1-model_v4 Rieske 2Fe-2S domain-containing protein 0.5875 64 168 GO:0046872
GO:0051537
AF-A0A0D8HIZ3-F1-model_v4 Cytochrome b6-f complex iron-sulfur subunit 1 (EC 1.10.9.1) 0.5829 64 168 GO:0016020
GO:0016491
GO:0046872
GO:0051537
AF-A0A0W8ID90-F1-model_v4 Cytochrome bc1 complex Rieske iron-sulfur subunit (Cytochrome bc1 reductase complex subunit QcrA) 0.5777 63 167 GO:0016020
GO:0046872
GO:0051537
AF-A0A3N5PKL5-F1-model_v4 Rieske (2Fe-2S) protein 0.5766 112 168 GO:0046872
GO:0051537
AF-A0A512IF73-F1-model_v4 Cytochrome bc1 complex Rieske iron-sulfur subunit (Cytochrome bc1 reductase complex subunit QcrA) 0.576 60 166 GO:0016020
GO:0046872
GO:0051537

Map