F341880

General Info

Members Datasets Scaffolds Average Seq Length
229 176 458 449

Family's Representative Sequence

Representative Sequence 3300005985|Ga0081539_10022354|Ga0081539_100223542
Length 484
Sequence VRFSLGPAPPTTSLHRTRDVAKDARTPIEIPEMPMPESLYAVTDPATGEVLRTYPTATAADVEKALSAAAAAQAGWSRTSTVADRAAAIGRVAELHTARRDELAAIIVREMGKPLEDALGEVDFSAAIYHYYADRAETFLADEPVDLLEGEGTAVVRRSPYGVLLGIMPWNFPYYQVARFAGPNLIVGNAIVLKHAPQCPESAAAIAQIMREADLPEGAYANLYATNDQVAEIIADPRVAGVSLTGSERAGAAVAEIAGRNLKKVVLELGGSDPFLLLGTDDLDAVVESALAARLDNTGQSCNAAKRFVVADHLYEPFVERFTAGVLAAADSITPLSSVAAADRLRAQVARAVEQGATLTSAGRNEGAYVAPGVLTDVAPGDDVYTQELFGPVAMVFRAHSEEEAVRLANDTPYGLGSYVFTDDAEQATRVADRIEAGMVFVNGVLLDGAELPFGGVKRSGFGRELGRYGIEEFVNKKLIRTLR

Samples

Sample ID Description Type Environment
1 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
3 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
17 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
28 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
29 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
36 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
37 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
38 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
39 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
40 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
41 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
42 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
43 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
44 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
47 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
52 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
53 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
57 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
60 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
61 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
62 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
63 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
64 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
65 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
91 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
93 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
96 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
97 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
98 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
99 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
100 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
101 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
102 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
103 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
104 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
105 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
106 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
107 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
108 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
109 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
110 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
111 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
112 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
113 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
114 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
115 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
116 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
117 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
118 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
119 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
120 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
121 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
122 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
123 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
124 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
125 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
126 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
127 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
128 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
129 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
130 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
131 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
132 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
133 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
134 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
135 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
145 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
146 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
147 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
148 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
149 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
150 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
151 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
152 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
153 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
154 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
155 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
156 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
157 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
158 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
159 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
160 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
161 2643221615 Nocardioides sp. Root224 Isolate Unclassified
162 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
163 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
164 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
165 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
166 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
167 2842888712 Tsukamurella sp. R-71941 Isolate Unclassified
168 2857720070 Microbacterium sp. R-72113 Isolate Unclassified
169 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
170 2862574272 Streptomyces sp. AcE210 Isolate Nodule
171 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
172 2902810491 Mycolicibacterium sp. P9-22 Isolate Unclassified
173 2928090899 Microbacterium sp. 1262 Isolate Rhizosphere
174 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
175 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
176 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 92.14
Metatranscriptomes 0.87
Isolates 6.99

Biome Distribution

Category Percentage (%)
Aerial Root 0.44
Bulb 0
Endosphere 8.3
Nodule 0.44
Rhizoplane 8.73
Rhizosphere 72.05
Stem 0
Stem Tuber 0.44
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081539_10022354 3300005985 Bacteria 4188
2 JGI25164J39214_1001102 3300002772 Bacteria 7765
3 JGI25165J46597_1000014 3300003214 Bacteria 390383
4 Ga0070658_10009803 3300005327 Bacteria 7694
5 Ga0070683_100001210 3300005329 Bacteria 19627
6 Ga0070683_100114238 3300005329 Bacteria 2548
7 Ga0070683_100118336 3300005329 Bacteria 2502
8 Ga0070680_100000004 3300005336 Bacteria 129387
9 Ga0070660_100013844 3300005339 Bacteria 5802
10 Ga0070689_100016880 3300005340 Bacteria 5350
11 Ga0070687_100008505 3300005343 Bacteria 4354
12 Ga0070687_100035498 3300005343 Bacteria 2476
13 Ga0070692_10014865 3300005345 Bacteria 3667
14 Ga0070668_100030184 3300005347 Bacteria 4121
15 Ga0070675_100089909 3300005354 Bacteria 2571
16 Ga0070674_100019867 3300005356 Bacteria 4277
17 Ga0070659_100139584 3300005366 Bacteria 1973
18 Ga0070667_100002992 3300005367 Bacteria 14517
19 Ga0070701_10020028 3300005438 Bacteria 3169
20 Ga0070705_100029012 3300005440 Bacteria 3037
21 Ga0070700_100039353 3300005441 Bacteria 2888
22 Ga0070708_100001281 3300005445 Bacteria 19353
23 Ga0070708_100192272 3300005445 Bacteria 1909
24 Ga0068867_100164352 3300005459 Bacteria 1753
25 Ga0070706_100038974 3300005467 Bacteria 4386
26 Ga0070706_100081753 3300005467 Bacteria 2992
27 Ga0070706_100307934 3300005467 Bacteria 1478
28 Ga0070707_100047368 3300005468 Bacteria 4115
29 Ga0070698_100007701 3300005471 Bacteria 11646
30 Ga0070698_100064558 3300005471 Bacteria 3688
31 Ga0070699_100011815 3300005518 Bacteria 7534
32 Ga0070699_100062267 3300005518 Bacteria 3233
33 Ga0070699_100219771 3300005518 Bacteria 1693
34 Ga0070679_100098917 3300005530 Bacteria 2904
35 Ga0070684_100036489 3300005535 Bacteria 4212
36 Ga0070686_100024378 3300005544 Bacteria 3625
37 Ga0070686_100097791 3300005544 Bacteria 1977
38 Ga0070695_100079511 3300005545 Bacteria 2164
39 Ga0070696_100000712 3300005546 Bacteria 21226
40 Ga0070696_100003994 3300005546 Bacteria 9834
41 Ga0070665_100035802 3300005548 Bacteria 4994
42 Ga0070664_100034310 3300005564 Bacteria 4256
43 Ga0068854_100073450 3300005578 Bacteria 2507
44 Ga0068852_100073316 3300005616 Bacteria 3011
45 Ga0068864_100252314 3300005618 Bacteria 1638
46 Ga0068866_10084427 3300005718 Bacteria 1713
47 Ga0068861_100057289 3300005719 Bacteria 2976
48 Ga0068870_10015270 3300005840 Bacteria 3641
49 Ga0068862_100000391 3300005844 Bacteria 47191
50 Ga0081455_10000360 3300005937 Bacteria 59979
51 Ga0081455_10006364 3300005937 Bacteria 12675
52 Ga0081455_10044180 3300005937 Bacteria 3890
53 Ga0081538_10000466 3300005981 Bacteria 45388
54 Ga0081539_10001100 3300005985 Bacteria 49090
55 Ga0081539_10004422 3300005985 Bacteria 15547
56 Ga0075365_10011540 3300006038 Bacteria 5199
57 Ga0075365_10081098 3300006038 Bacteria 2198
58 Ga0075365_10086017 3300006038 Bacteria 2136
59 Ga0075368_10003156 3300006042 Bacteria 5478
60 Ga0075364_10008086 3300006051 Bacteria 6272
61 Ga0075364_10102609 3300006051 Bacteria 1904
62 Ga0075364_10125259 3300006051 Bacteria 1722
63 Ga0075370_10009679 3300006353 Bacteria 5016
64 Ga0075434_100026849 3300006871 Bacteria 5647
65 Ga0075434_100088664 3300006871 Bacteria 3095
66 Ga0068865_100102061 3300006881 Bacteria 2102
67 Ga0075435_100046494 3300007076 Bacteria 3482
68 Ga0111539_10031740 3300009094 Bacteria 6418
69 Ga0111539_10074729 3300009094 Bacteria 3993
70 Ga0105245_10030599 3300009098 Bacteria 4761
71 Ga0105245_10108102 3300009098 Bacteria 2583
72 Ga0105245_10113937 3300009098 Bacteria 2518
73 Ga0114129_10047216 3300009147 Bacteria 6051
74 Ga0114129_10276094 3300009147 Bacteria 2247
75 Ga0105243_10006996 3300009148 Bacteria 8685
76 Ga0105243_10038576 3300009148 Bacteria 3720
77 Ga0105242_10018322 3300009176 Bacteria 5472
78 Ga0105237_10000103 3300009545 Bacteria 118661
79 Ga0105249_10008149 3300009553 Bacteria 9133
80 Ga0105249_10042949 3300009553 Bacteria 4112
81 Ga0105239_10001962 3300010375 Bacteria 26758
82 Ga0105239_10091685 3300010375 Bacteria 3353
83 Ga0171462_1004 3300013250 Bacteria 678877
84 Ga0157378_10066612 3300013297 Bacteria 3226
85 Ga0157378_10069246 3300013297 Bacteria 3165
86 Ga0157375_10052153 3300013308 Bacteria 4020
87 Ga0163163_10046141 3300014325 Bacteria 4279
88 Ga0163163_10047584 3300014325 Bacteria 4216
89 Ga0163161_10060946 3300017792 Bacteria 2747
90 Ga0206353_10249053 3300020082 Bacteria 2842
91 Ga0206353_11356677 3300020082 Bacteria 2227
92 Ga0207427_100121 3300025231 Bacteria 99954
93 Ga0209437_100398 3300025233 Bacteria 40556
94 Ga0209233_1000014 3300025261 Bacteria 996641
95 Ga0207643_10004862 3300025908 Bacteria 7198
96 Ga0207671_10013658 3300025914 Bacteria 6454
97 Ga0207660_10000001 3300025917 Bacteria 1034169
98 Ga0207662_10012502 3300025918 Bacteria 4727
99 Ga0207662_10031736 3300025918 Bacteria 3070
100 Ga0207657_10035146 3300025919 Bacteria 4497
101 Ga0207646_10001425 3300025922 Bacteria 29684
102 Ga0207650_10115930 3300025925 Bacteria 2080
103 Ga0207687_10204066 3300025927 Bacteria 1547
104 Ga0207706_10067536 3300025933 Bacteria 3145
105 Ga0207709_10003866 3300025935 Bacteria 8771
106 Ga0207670_10148165 3300025936 Bacteria 1738
107 Ga0207669_10008140 3300025937 Bacteria 4906
108 Ga0207691_10128414 3300025940 Bacteria 2241
109 Ga0207661_10085391 3300025944 Bacteria 2616
110 Ga0207668_10007332 3300025972 Bacteria 6554
111 Ga0207658_10001012 3300025986 Bacteria 22933
112 Ga0207677_10052680 3300026023 Bacteria 2766
113 Ga0207639_10165882 3300026041 Bacteria 1866
114 Ga0207678_10017587 3300026067 Bacteria 6278
115 Ga0207678_10074646 3300026067 Bacteria 2906
116 Ga0207678_10125940 3300026067 Bacteria 2185
117 Ga0207708_10019316 3300026075 Bacteria 5135
118 Ga0207648_10238646 3300026089 Bacteria 1618
119 Ga0207674_10061287 3300026116 Bacteria 3801
120 Ga0207675_100112089 3300026118 Bacteria 2574
121 Ga0207675_100182593 3300026118 Bacteria 2009
122 Ga0207683_10023847 3300026121 Bacteria 5263
123 Ga0207698_10173181 3300026142 Bacteria 1903
124 Ga0209998_10000753 3300027717 Bacteria 8476
125 Ga0209974_10007435 3300027876 Bacteria 3774
126 Ga0207428_10054690 3300027907 Bacteria 3178
127 Ga0268266_10023249 3300028379 Bacteria 5277
128 Ga0268265_10000440 3300028380 Bacteria 43839
129 Ga0265327_10000125 3300031251 Bacteria 167832
130 Ga0265327_10080910 3300031251 Bacteria 1605
131 Ga0316576_10015704 3300031727 Bacteria 5090
132 Ga0307406_10000933 3300031901 Bacteria 16331
133 Ga0307416_100111941 3300032002 Bacteria 2408
134 Ga0373962_0017741 3300035242 Bacteria 1847
135 Ga0316574_0015402 3300035398 Bacteria 4436
136 Ga0316574_0038522 3300035398 Bacteria 2935
137 Ga0373937_0011195 3300036401 Bacteria 7863
138 Ga0316584_0120107 3300036712 Bacteria 1964
139 Ga0395900_0004395 3300037418 Bacteria 14955
140 Ga0395905_0263380 3300037471 Bacteria 1609
141 Ga0395901_0157834 3300038443 Bacteria 2382
142 Ga0451833_0585197 3300041491 Bacteria 1875
143 Ga0451853_4042606 3300041512 Bacteria 1601
144 Ga0466972_0029796 3300044658 Bacteria 2687
145 Ga0466965_0013617 3300044683 Bacteria 3840
146 Ga0466961_0015454 3300044693 Bacteria 4899
147 Ga0466970_0004843 3300044765 Bacteria 6643
148 Ga0466970_0022763 3300044765 Bacteria 3269
149 Ga0466960_0000228 3300044901 Bacteria 19502
150 Ga0466960_0017163 3300044901 Bacteria 3151
151 Ga0466959_0011374 3300045049 Bacteria 6394
152 Ga0466967_0110007 3300045976 Bacteria 2530
153 Ga0495628_0076382 3300046516 Bacteria 2607
154 Ga0496102_0002706 3300048905 Bacteria 15076
155 Ga0496102_0030350 3300048905 Bacteria 4838
156 Ga0496103_0083201 3300048906 Bacteria 2015
157 Ga0496104_0080086 3300048907 Bacteria 3114
158 Ga0496106_0065521 3300048909 Bacteria 2766
159 Ga0496106_0106199 3300048909 Bacteria 2182
160 Ga0496107_0048098 3300048910 Bacteria 3072
161 Ga0496108_0050014 3300048911 Bacteria 3498
162 Ga0496109_0108009 3300048912 Bacteria 2586
163 Ga0496109_0117482 3300048912 Bacteria 2476
164 Ga0496109_0185018 3300048912 Bacteria 1957
165 Ga0496109_0232705 3300048912 Bacteria 1734
166 Ga0496110_0075351 3300048913 Bacteria 2998
167 Ga0496110_0238578 3300048913 Bacteria 1654
168 Ga0496111_0115294 3300048914 Bacteria 1981
169 Ga0496112_0000005 3300048915 Bacteria 525541
170 Ga0496112_0000878 3300048915 Bacteria 21568
171 Ga0496113_0000180 3300048916 Bacteria 28274
172 Ga0496113_0178711 3300048916 Bacteria 1682
173 Ga0496114_0061743 3300048917 Bacteria 3135
174 Ga0496117_0003008 3300048920 Bacteria 20264
175 Ga0496118_0001573 3300048921 Bacteria 33871
176 Ga0496118_0003395 3300048921 Bacteria 20127
177 Ga0496119_0002150 3300048922 Bacteria 22146
178 Ga0496122_0065717 3300048925 Bacteria 2627
179 Ga0496123_0002820 3300048926 Bacteria 20601
180 Ga0496123_0006348 3300048926 Bacteria 11481
181 Ga0496125_0000360 3300048928 Bacteria 86040
182 Ga0496126_0002093 3300048929 Bacteria 27948
183 Ga0501032_0003082 3300049569 Bacteria 12866
184 Ga0501033_0014481 3300049570 Bacteria 5987
185 Ga0501034_0015978 3300049571 Bacteria 7705
186 Ga0501034_0103633 3300049571 Bacteria 2838
187 Ga0501036_0017109 3300049572 Bacteria 6060
188 Ga0501037_0000702 3300049573 Bacteria 25462
189 Ga0501038_0006051 3300049574 Bacteria 11194
190 Ga0501039_0000312 3300049575 Bacteria 34396
191 Ga0501043_0002648 3300049579 Bacteria 15052
192 Ga0501046_0181669 3300049580 Bacteria 1572
193 Ga0501067_0000573 3300049583 Bacteria 19902
194 Ga0501068_0040635 3300049584 Bacteria 2793
195 Ga0501070_0000168 3300049586 Bacteria 60303
196 Ga0501070_0011417 3300049586 Bacteria 7506
197 Ga0501076_0047681 3300049592 Bacteria 3387
198 Ga0501080_0315473 3300049742 Bacteria 1416
199 Ga0501044_0047570 3300049823 Bacteria 4436
200 nmdc:mga03n38_33014_c1 3300050490 Bacteria 2198
201 nmdc:mga00v17_68658_c1 3300050491 Bacteria 2191
202 nmdc:mga00v17_74016_c1 3300050491 Bacteria 2116
203 nmdc:mga00v17_94771_c1 3300050491 Bacteria 1878
204 nmdc:mga06z11_53827_c1 3300050494 Bacteria 2072
205 nmdc:mga08y16_89760_c1 3300050511 Bacteria 3203
206 nmdc:mga0n895_10381_c1 3300050512 Bacteria 8220
207 nmdc:mga0n895_111414_c1 3300050512 Bacteria 2753
208 nmdc:mga0rr50_31308_c1 3300050513 Bacteria 3776
209 nmdc:mga08x19_128418_c1 3300050514 Bacteria 1703
210 nmdc:mga0sz30_11409_c1 3300050516 Bacteria 3429
211 Ga0495612_0000963 3300053078 Bacteria 11832
212 Ga0495655_0001181 3300053083 Bacteria 4033
213 Ga0501082_0009270 3300060353 Bacteria 8484
214 2644089880 2643221615 Bacteria 5487866
215 2644319725 2643221657 Bacteria 5490246
216 2774398431 2773857763 Bacteria 4180068
217 2808630244 2808606306 Bacteria 3608896
218 2808883605 2808606368 Bacteria 3174172
219 2821270953 2821268502 Bacteria 3750023
220 2842892169 2842888712 Bacteria 4279094
221 2857722445 2857720070 Bacteria 3189373
222 2862514530 2862507626 Bacteria 9425308
223 2862582072 2862574272 Bacteria 10567477
224 2884764020 2884763398 Bacteria 4091164
225 2902813153 2902810491 Bacteria 6794147
226 2928092667 2928090899 Bacteria 3158267
227 2946082859 2946080515 Bacteria 4310960
228 2984583796 2984580707 Bacteria 3351387
229 8045834138 8045830549 Bacteria 4444727
230 Ga0081539_10022354
231 JGI25164J39214_1001102
232 JGI25165J46597_1000014
233 Ga0070658_10009803
234 Ga0070683_100001210
235 Ga0070683_100114238
236 Ga0070683_100118336
237 Ga0070680_100000004
238 Ga0070660_100013844
239 Ga0070689_100016880
240 Ga0070687_100008505
241 Ga0070687_100035498
242 Ga0070692_10014865
243 Ga0070668_100030184
244 Ga0070675_100089909
245 Ga0070674_100019867
246 Ga0070659_100139584
247 Ga0070667_100002992
248 Ga0070701_10020028
249 Ga0070705_100029012
250 Ga0070700_100039353
251 Ga0070708_100001281
252 Ga0070708_100192272
253 Ga0068867_100164352
254 Ga0070706_100038974
255 Ga0070706_100081753
256 Ga0070706_100307934
257 Ga0070707_100047368
258 Ga0070698_100007701
259 Ga0070698_100064558
260 Ga0070699_100011815
261 Ga0070699_100062267
262 Ga0070699_100219771
263 Ga0070679_100098917
264 Ga0070684_100036489
265 Ga0070686_100024378
266 Ga0070686_100097791
267 Ga0070695_100079511
268 Ga0070696_100000712
269 Ga0070696_100003994
270 Ga0070665_100035802
271 Ga0070664_100034310
272 Ga0068854_100073450
273 Ga0068852_100073316
274 Ga0068864_100252314
275 Ga0068866_10084427
276 Ga0068861_100057289
277 Ga0068870_10015270
278 Ga0068862_100000391
279 Ga0081455_10000360
280 Ga0081455_10006364
281 Ga0081455_10044180
282 Ga0081538_10000466
283 Ga0081539_10001100
284 Ga0081539_10004422
285 Ga0075365_10011540
286 Ga0075365_10081098
287 Ga0075365_10086017
288 Ga0075368_10003156
289 Ga0075364_10008086
290 Ga0075364_10102609
291 Ga0075364_10125259
292 Ga0075370_10009679
293 Ga0075434_100026849
294 Ga0075434_100088664
295 Ga0068865_100102061
296 Ga0075435_100046494
297 Ga0111539_10031740
298 Ga0111539_10074729
299 Ga0105245_10030599
300 Ga0105245_10108102
301 Ga0105245_10113937
302 Ga0114129_10047216
303 Ga0114129_10276094
304 Ga0105243_10006996
305 Ga0105243_10038576
306 Ga0105242_10018322
307 Ga0105237_10000103
308 Ga0105249_10008149
309 Ga0105249_10042949
310 Ga0105239_10001962
311 Ga0105239_10091685
312 Ga0171462_1004
313 Ga0157378_10066612
314 Ga0157378_10069246
315 Ga0157375_10052153
316 Ga0163163_10046141
317 Ga0163163_10047584
318 Ga0163161_10060946
319 Ga0206353_10249053
320 Ga0206353_11356677
321 Ga0207427_100121
322 Ga0209437_100398
323 Ga0209233_1000014
324 Ga0207643_10004862
325 Ga0207671_10013658
326 Ga0207660_10000001
327 Ga0207662_10012502
328 Ga0207662_10031736
329 Ga0207657_10035146
330 Ga0207646_10001425
331 Ga0207650_10115930
332 Ga0207687_10204066
333 Ga0207706_10067536
334 Ga0207709_10003866
335 Ga0207670_10148165
336 Ga0207669_10008140
337 Ga0207691_10128414
338 Ga0207661_10085391
339 Ga0207668_10007332
340 Ga0207658_10001012
341 Ga0207677_10052680
342 Ga0207639_10165882
343 Ga0207678_10017587
344 Ga0207678_10074646
345 Ga0207678_10125940
346 Ga0207708_10019316
347 Ga0207648_10238646
348 Ga0207674_10061287
349 Ga0207675_100112089
350 Ga0207675_100182593
351 Ga0207683_10023847
352 Ga0207698_10173181
353 Ga0209998_10000753
354 Ga0209974_10007435
355 Ga0207428_10054690
356 Ga0268266_10023249
357 Ga0268265_10000440
358 Ga0265327_10000125
359 Ga0265327_10080910
360 Ga0316576_10015704
361 Ga0307406_10000933
362 Ga0307416_100111941
363 Ga0373962_0017741
364 Ga0316574_0015402
365 Ga0316574_0038522
366 Ga0373937_0011195
367 Ga0316584_0120107
368 Ga0395900_0004395
369 Ga0395905_0263380
370 Ga0395901_0157834
371 Ga0451833_0585197
372 Ga0451853_4042606
373 Ga0466972_0029796
374 Ga0466965_0013617
375 Ga0466961_0015454
376 Ga0466970_0004843
377 Ga0466970_0022763
378 Ga0466960_0000228
379 Ga0466960_0017163
380 Ga0466959_0011374
381 Ga0466967_0110007
382 Ga0495628_0076382
383 Ga0496102_0002706
384 Ga0496102_0030350
385 Ga0496103_0083201
386 Ga0496104_0080086
387 Ga0496106_0065521
388 Ga0496106_0106199
389 Ga0496107_0048098
390 Ga0496108_0050014
391 Ga0496109_0108009
392 Ga0496109_0117482
393 Ga0496109_0185018
394 Ga0496109_0232705
395 Ga0496110_0075351
396 Ga0496110_0238578
397 Ga0496111_0115294
398 Ga0496112_0000005
399 Ga0496112_0000878
400 Ga0496113_0000180
401 Ga0496113_0178711
402 Ga0496114_0061743
403 Ga0496117_0003008
404 Ga0496118_0001573
405 Ga0496118_0003395
406 Ga0496119_0002150
407 Ga0496122_0065717
408 Ga0496123_0002820
409 Ga0496123_0006348
410 Ga0496125_0000360
411 Ga0496126_0002093
412 Ga0501032_0003082
413 Ga0501033_0014481
414 Ga0501034_0015978
415 Ga0501034_0103633
416 Ga0501036_0017109
417 Ga0501037_0000702
418 Ga0501038_0006051
419 Ga0501039_0000312
420 Ga0501043_0002648
421 Ga0501046_0181669
422 Ga0501067_0000573
423 Ga0501068_0040635
424 Ga0501070_0000168
425 Ga0501070_0011417
426 Ga0501076_0047681
427 Ga0501080_0315473
428 Ga0501044_0047570
429 nmdc:mga03n38_33014_c1
430 nmdc:mga00v17_68658_c1
431 nmdc:mga00v17_74016_c1
432 nmdc:mga00v17_94771_c1
433 nmdc:mga06z11_53827_c1
434 nmdc:mga08y16_89760_c1
435 nmdc:mga0n895_10381_c1
436 nmdc:mga0n895_111414_c1
437 nmdc:mga0rr50_31308_c1
438 nmdc:mga08x19_128418_c1
439 nmdc:mga0sz30_11409_c1
440 Ga0495612_0000963
441 Ga0495655_0001181
442 Ga0501082_0009270
443 2644089880
444 2644319725
445 2774398431
446 2808630244
447 2808883605
448 2821270953
449 2842892169
450 2857722445
451 2862514530
452 2862582072
453 2884764020
454 2902813153
455 2928092667
456 2946082859
457 2984583796
458 8045834138

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00171

Aldedh

Aldehyde dehydrogenase family

34

480

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3vz0-assembly2.cif.gz_C structural insights into cofactor and substrate selection by gox0499 0.9734 2 454
4ywv-assembly1.cif.gz_B structural insight into the substrate inhibition mechanism of nadp+-dependent succinic semialdehyde dehydrogenase from streptococcus pyogenes 0.9723 3 455
4it9-assembly1.cif.gz_B structure of bacterial enzyme 0.9689 4 453
3efv-assembly1.cif.gz_A crystal structure of a putative succinate-semialdehyde dehydrogenase from salmonella typhimurium lt2 with bound nad 0.9687 2 452
3vz3-assembly1.cif.gz_B structural insights into substrate and cofactor selection by sp2771 0.9686 3 453
ID Description Score Start End Superfamily
af_P9WNX9_1_452_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9796 1 449 3.40.605.10
af_P9WNX9_3_238_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9779 4 238 3.40.605.10
3vz0C01 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9758 1 235 3.40.605.10
4it9A01 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9737 4 237 3.40.605.10
af_P9WNX9_1_452_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.971 1 449 3.40.605.10
ID Description Score Start End GO Terms
AF-A0A161GGG0-F1-model_v4 deleted 0.9789 2 163
AF-A0A1I5DZB2-F1-model_v4 Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase 0.9782 1 454 GO:0004030
GO:0004777
AF-A0A7Z6WHX2-F1-model_v4 Succinate-semialdehyde dehydrogenase 0.977 1 388 GO:0004030
GO:0004777
AF-A0A3D5CE93-F1-model_v4 NADP-dependent succinic semialdehyde dehydrogenase 0.9766 1 408 GO:0004777
AF-F1YEM2-F1-model_v4 Aldehyde dehydrogenase 0.9757 5 455 GO:0004777

Map