F341879

General Info

Members Datasets Scaffolds Average Seq Length
229 182 190 470

Family's Representative Sequence

Representative Sequence 3300005985|Ga0081539_10022155|Ga0081539_100221553
Length 537
Sequence MPKTLAELIAAVPQQAVVTGDAAIEITAPVVESDAEVQPGGVFVARTGMSVDGHDFIPRAIERGAAAIVGEKPITDLPIPYVQFENAQEAVGFLAAAYHDFPSRKLIVIGVTGTDGKTTTSTLIHSILREASKGRAGLISTISADVGDQSLDTGLHVTTPGAPQIQALLAQMVANGLQYAVLEMTSHGLAQGRLNGVDLDVAVLTNVTHEHLDYHKTFENYRAAKGRMFEMLGKSDRKNGRLKLAVINGDDPNADYFIKIVNKAVSASGTSGGATTYGLHSGYWKPLDVRYEPNGTHIFMASMLPDTTELYDEPTEFFTPLIGEFNVMNALAAITTTSWLLRYSGIRAMQRGIEAVTAISGRMERIDEGQDFLSLVDFAHTPNALENVLKACRKMLSEGGRVIAVIGSAGLRDREKRRLMAEVAARLADFTVLTAEDPRTESLDAILETMAQASIAAGGVEGETFIRVPDRGEALYRACQMARKGDIVIACGKGHEQSMAFGTVEYPWDDREAMRAALRGEPLKTLPTASGDRPAEG

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2513020052 Flavobacterium sp. CF136 Isolate Rhizosphere
3 2519899754 Flavobacterium sp. F52 Isolate Rhizosphere
4 2643221600 Flavobacterium sp. Root186 Isolate Unclassified
5 2643221667 Flavobacterium sp. Root420 Isolate Unclassified
6 2643221716 Flavobacterium sp. Root901 Isolate Unclassified
7 2643221725 Flavobacterium sp. Root935 Isolate Unclassified
8 2703719227 Bacillus mycoides GOE6 Isolate Rhizosphere
9 2738541279 Flavobacterium sp. GV069 Isolate Unclassified
10 2738541285 Flavobacterium sp. GV030 Isolate Unclassified
11 2738541358 Bacillus sp. OV752 Isolate Unclassified
12 2738543006 Bacillus sp. OK077 Isolate Unclassified
13 2738543007 Flavobacterium sp. GV063 Isolate Unclassified
14 2739367857 Flavobacterium sp. GV029 Isolate Unclassified
15 2739367858 Flavobacterium sp. GV028 Isolate Unclassified
16 2802428842 Flavobacterium sp. S87F.05.LMB.W.Kidney.N Isolate Unclassified
17 2816332280 Flavobacterium johnsoniae GSE09 Isolate Unclassified
18 2857613821 Flavobacterium sp. R-72247 Isolate Unclassified
19 2857618242 Flavobacterium sp. R-74482 Isolate Unclassified
20 2881359912 Flavobacterium ustbae T13 Isolate Rhizosphere
21 2881644220 Siminovitchia terrae LMG 29736 Isolate Rhizosphere
22 2903895155 Flavobacterium sp. HBTb2-11-1 Isolate Rhizosphere
23 2904419702 Flavobacterium sp. 1355 Isolate Rhizosphere
24 2904555929 Flavobacterium sp. 1750 Isolate Rhizosphere
25 2916971899 Alkalihalobacillus miscanthi AK13 Isolate Rhizosphere
26 2919191525 Flavobacterium sp. 2755 Isolate Rhizosphere
27 2919683626 Flavobacterium piscis 4129 Isolate Unclassified
28 2929150217 Flavobacterium sp. R-74510 Hybrid assembly Isolate Unclassified
29 2958458903 Flavobacterium anhuiense RCM74 Isolate Rhizosphere
30 2965761152 Bacillus sp. COPE52 Isolate Unclassified
31 2977268062 Flavobacterium sp. SORGH_AS 622 Isolate Unclassified
32 2979083700 Bacillus toyonensis SORGH_AS 407 Isolate Unclassified
33 3001267043 Bacillus sp. FJAT-49870 Isolate Rhizosphere
34 3001272096 Lederbergia citrisecunda FJAT-49732 Isolate Rhizosphere
35 3006969106 Bacillus sp. FJAT-50079 Isolate Rhizosphere
36 3006988479 Bacillus sp. FJAT-49711 Isolate Rhizosphere
37 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
38 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
39 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
40 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
41 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
42 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
43 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
44 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
45 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
46 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
47 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
48 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
49 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
50 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
51 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
52 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
53 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
54 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
55 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
56 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
57 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
58 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
59 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
60 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
61 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
62 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
63 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
64 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
65 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
66 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
67 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
68 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
69 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
84 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
86 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
87 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
88 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
89 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
90 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
91 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
92 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
93 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
94 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
95 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
96 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
97 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
98 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
99 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
100 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
101 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
102 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
103 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
104 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
105 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
106 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
107 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
108 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
109 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
110 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
111 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
112 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
113 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
114 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
115 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
116 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
117 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
118 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
119 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
120 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
121 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
122 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
123 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
124 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
125 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
126 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
127 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
128 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
129 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
130 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
131 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
132 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
133 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
134 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
135 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
136 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
137 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
138 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
139 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
140 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
141 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
142 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
143 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
144 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
145 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
146 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
147 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
148 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
149 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
150 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
151 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
152 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
153 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
154 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
155 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
156 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
157 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
158 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
161 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
162 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
163 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
164 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
165 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
166 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
167 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
168 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
169 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
170 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
171 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
172 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
173 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
174 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
175 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
176 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
177 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
178 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
179 8054307821 Flavobacterium soyae SCIV07 Isolate Rhizosphere
180 8055419101 Flavobacterium tyrosinilyticum KCTC 42726 Isolate Rhizosphere
181 8055592153 Flavobacterium panacis DCY106 Isolate Rhizosphere
182 8056440228 Flavobacterium hibisci THG-HG1.4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 82.53
Metatranscriptomes 0.44
Isolates 17.03

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.06
Nodule 1.75
Rhizoplane 10.04
Rhizosphere 69.43
Stem 0
Stem Tuber 0
Unclassified 15.72

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1716529 2162886007 Bacteria 5732
2 JGI25159J45721_1001107 3300002987 Bacteria 11499
3 Ga0006562J51391_1007085 3300003578 Bacteria 16073
4 Ga0065714_10004506 3300005288 Bacteria 4823
5 Ga0065714_10067310 3300005288 Bacteria 5667
6 Ga0065714_10071229 3300005288 Bacteria 3632
7 Ga0065704_10072462 3300005289 Bacteria 8466
8 Ga0070677_10000080 3300005333 Bacteria 30587
9 Ga0070710_10078597 3300005437 Bacteria 1920
10 Ga0070700_100030167 3300005441 Bacteria 3238
11 Ga0070684_100000780 3300005535 Bacteria 22118
12 Ga0070672_100000025 3300005543 Bacteria 67313
13 Ga0070665_100000138 3300005548 Bacteria 136562
14 Ga0068857_100002096 3300005577 Bacteria 16204
15 Ga0068866_10006910 3300005718 Bacteria 4740
16 Ga0068863_100026262 3300005841 Bacteria 5557
17 Ga0068858_100000009 3300005842 Bacteria 237748
18 Ga0068858_100000284 3300005842 Bacteria 54715
19 Ga0081539_10022155 3300005985 Bacteria 4213
20 Ga0099824_1000146 3300006942 Bacteria 63004
21 Ga0079104_1000126 3300006946 Bacteria 109126
22 Ga0099826_10000374 3300006948 Bacteria 20771
23 Ga0105244_10000508 3300009036 Bacteria 34770
24 Ga0105250_10001250 3300009092 Bacteria 14073
25 Ga0105243_10009674 3300009148 Bacteria 7339
26 Ga0105242_10000397 3300009176 Bacteria 34573
27 Ga0105246_10084863 3300011119 Bacteria 2267
28 Ga0157373_10000038 3300013100 Bacteria 121372
29 Ga0157370_10005833 3300013104 Bacteria 13761
30 Ga0157370_10006335 3300013104 Bacteria 13076
31 Ga0157370_10017853 3300013104 Bacteria 7150
32 Ga0157369_10002379 3300013105 Bacteria 22602
33 Ga0157375_10025347 3300013308 Bacteria 5508
34 Ga0182006_1004174 3300015261 Bacteria 7172
35 Ga0163161_10000083 3300017792 Bacteria 94571
36 Ga0213876_10004675 3300021384 Bacteria 7627
37 Ga0209130_1001603 3300025284 Bacteria 14088
38 Ga0209025_1000519 3300025294 Bacteria 73362
39 Ga0207655_1000045 3300025728 Bacteria 315397
40 Ga0207682_10000045 3300025893 Bacteria 51744
41 Ga0207642_10002571 3300025899 Bacteria 5653
42 Ga0207693_10129571 3300025915 Bacteria 1983
43 Ga0207646_10055207 3300025922 Bacteria 3552
44 Ga0207686_10000252 3300025934 Bacteria 40825
45 Ga0207709_10002134 3300025935 Bacteria 12691
46 Ga0207661_10020519 3300025944 Bacteria 4940
47 Ga0207679_10080834 3300025945 Bacteria 2483
48 Ga0207668_10017013 3300025972 Bacteria 4550
49 Ga0207703_10000018 3300026035 Bacteria 271377
50 Ga0207703_10000207 3300026035 Bacteria 68866
51 Ga0207708_10135483 3300026075 Bacteria 1928
52 Ga0207641_10008098 3300026088 Bacteria 8706
53 Ga0207674_10007140 3300026116 Bacteria 13048
54 Ga0209281_1000424 3300027111 Bacteria 63116
55 Ga0268266_10000047 3300028379 Bacteria 310996
56 Ga0307408_100000572 3300031548 Bacteria 31757
57 Ga0307408_100000822 3300031548 Bacteria 24653
58 Ga0307405_10000001 3300031731 Bacteria 1731270
59 Ga0307413_10000191 3300031824 Bacteria 17656
60 Ga0307410_10000085 3300031852 Bacteria 31342
61 Ga0307406_10000029 3300031901 Bacteria 87707
62 Ga0307406_10051272 3300031901 Bacteria 2619
63 Ga0307407_10004763 3300031903 Bacteria 5806
64 Ga0307409_100019846 3300031995 Bacteria 4564
65 Ga0307416_100026507 3300032002 Bacteria 4272
66 Ga0307416_100061405 3300032002 Bacteria 3067
67 Ga0307414_10000005 3300032004 Bacteria 452161
68 Ga0307414_10001209 3300032004 Bacteria 13311
69 Ga0307411_10000002 3300032005 Bacteria 534807
70 Ga0307510_10014167 3300033180 Bacteria 9441
71 Ga0373944_0002742 3300035089 Bacteria 4500
72 Ga0373936_0002887 3300035113 Bacteria 6415
73 Ga0373943_0001192 3300035170 Bacteria 11613
74 Ga0373943_0002076 3300035170 Bacteria 9095
75 Ga0373935_0013263 3300035692 Bacteria 4971
76 Ga0373947_0019614 3300035725 Bacteria 3899
77 Ga0373947_0046153 3300035725 Bacteria 2608
78 Ga0373925_0005621 3300037068 Bacteria 9327
79 Ga0373925_0010051 3300037068 Bacteria 6874
80 Ga0395900_0133727 3300037418 Bacteria 2541
81 Ga0436365_1577912 3300039437 Bacteria 3333
82 Ga0436365_1611971 3300039437 Bacteria 6620
83 Ga0436363_0123694 3300039450 Bacteria 1814
84 Ga0436363_1613861 3300039450 Bacteria 1524
85 Ga0439447_000057 3300041407 Bacteria 38460
86 Ga0451577_0035879 3300042876 Bacteria 4466
87 Ga0453683_0012716 3300044673 Bacteria 5511
88 Ga0453683_0021859 3300044673 Unclassified 4080
89 Ga0453683_0078475 3300044673 Bacteria 2068
90 Ga0466963_0054751 3300044694 Bacteria 2652
91 Ga0466958_0061503 3300045836 Bacteria 2288
92 Ga0466967_0065000 3300045976 Bacteria 3246
93 Ga0466967_0155392 3300045976 Bacteria 2142
94 Ga0495592_0041745 3300046454 Bacteria 3437
95 Ga0495629_0000593 3300046459 Bacteria 29449
96 Ga0495641_0001017 3300046461 Bacteria 24111
97 Ga0495641_0014016 3300046461 Bacteria 4363
98 Ga0495641_0016868 3300046461 Bacteria 3829
99 Ga0495651_0036294 3300046462 Bacteria 3837
100 Ga0495582_0000056 3300046473 Bacteria 57084
101 Ga0495639_0002894 3300046475 Bacteria 7474
102 Ga0495608_0004777 3300046511 Bacteria 9688
103 Ga0495608_0058145 3300046511 Bacteria 2550
104 Ga0495628_0113517 3300046516 Bacteria 2082
105 Ga0495630_0009353 3300046517 Bacteria 7045
106 Ga0495630_0079832 3300046517 Unclassified 2468
107 Ga0495666_0021081 3300046526 Bacteria 3226
108 Ga0495652_0047075 3300046529 Bacteria 3700
109 Ga0495652_0060952 3300046529 Bacteria 3186
110 Ga0495665_0000364 3300046531 Bacteria 22881
111 Ga0495640_0063287 3300046533 Bacteria 2506
112 Ga0495587_0053954 3300046536 Bacteria 2369
113 Ga0495667_0000047 3300046559 Bacteria 117718
114 Ga0495656_0000210 3300046615 Bacteria 20852
115 Ga0495634_0036830 3300046642 Bacteria 3344
116 Ga0495635_0014808 3300046663 Bacteria 5455
117 Ga0495635_0051672 3300046663 Bacteria 2831
118 Ga0495599_0083018 3300046678 Bacteria 2001
119 Ga0495647_0029159 3300046681 Bacteria 2039
120 Ga0495658_0023014 3300046683 Bacteria 3303
121 Ga0495613_0000401 3300046689 Bacteria 37127
122 Ga0495670_0022303 3300046691 Bacteria 3126
123 Ga0495674_0061582 3300047319 Bacteria 3270
124 Ga0495676_0086495 3300047321 Bacteria 2358
125 Ga0495680_0000447 3300047322 Bacteria 46180
126 Ga0495680_0004249 3300047322 Bacteria 13751
127 Ga0495680_0004314 3300047322 Bacteria 13633
128 Ga0495680_0010742 3300047322 Bacteria 8158
129 Ga0495684_0011366 3300047471 Bacteria 6874
130 Ga0495684_0076043 3300047471 Bacteria 2550
131 Ga0495593_0010801 3300047673 Bacteria 5263
132 Ga0495614_0000769 3300048089 Bacteria 13583
133 Ga0496100_0028085 3300048903 Bacteria 3467
134 Ga0496102_0000572 3300048905 Bacteria 39087
135 Ga0496102_0083964 3300048905 Bacteria 2939
136 Ga0496103_0000008 3300048906 Bacteria 340474
137 Ga0496104_0004295 3300048907 Bacteria 12387
138 Ga0496104_0015295 3300048907 Bacteria 6947
139 Ga0496104_0039387 3300048907 Bacteria 4426
140 Ga0496104_0080195 3300048907 Bacteria 3112
141 Ga0496104_0264521 3300048907 Bacteria 1632
142 Ga0496105_0002091 3300048908 Bacteria 14436
143 Ga0496105_0011797 3300048908 Bacteria 6919
144 Ga0496105_0021766 3300048908 Bacteria 5190
145 Ga0496105_0184178 3300048908 Bacteria 1709
146 Ga0496109_0065443 3300048912 Bacteria 3328
147 Ga0496109_0088387 3300048912 Bacteria 2864
148 Ga0496110_0045938 3300048913 Bacteria 3819
149 Ga0496111_0069001 3300048914 Bacteria 2570
150 Ga0496112_0072695 3300048915 Bacteria 3400
151 Ga0496113_0127492 3300048916 Bacteria 1994
152 Ga0496114_0000074 3300048917 Bacteria 71312
153 Ga0496114_0014099 3300048917 Bacteria 6408
154 Ga0496115_0000367 3300048918 Bacteria 37531
155 Ga0496115_0001237 3300048918 Bacteria 18328
156 Ga0496116_0000212 3300048919 Bacteria 109276
157 Ga0496119_0011579 3300048922 Bacteria 7278
158 Ga0496121_0011045 3300048924 Bacteria 10080
159 Ga0496121_0017049 3300048924 Bacteria 7450
160 Ga0496124_0110378 3300048927 Bacteria 2214
161 Ga0496125_0000062 3300048928 Bacteria 259277
162 Ga0496125_0074853 3300048928 Bacteria 2623
163 Ga0496125_0094568 3300048928 Bacteria 2226
164 Ga0496126_0005976 3300048929 Bacteria 13686
165 Ga0501042_0069060 3300049578 Bacteria 2527
166 Ga0501042_0128876 3300049578 Bacteria 1823
167 Ga0501047_0054347 3300049581 Bacteria 3873
168 Ga0501075_0105481 3300049591 Bacteria 2142
169 Ga0501223_001183 3300049663 Bacteria 6152
170 Ga0501238_000153 3300049671 Bacteria 10601
171 Ga0501249_000005 3300049679 Bacteria 225972
172 Ga0501079_0026297 3300049741 Bacteria 4462
173 Ga0501241_008084 3300049758 Bacteria 1925
174 Ga0501266_000021 3300049763 Bacteria 96901
175 Ga0501269_002600 3300049766 Bacteria 2210
176 Ga0501280_000448 3300049776 Bacteria 9855
177 Ga0495601_0050738 3300053077 Bacteria 2617
178 Ga0495601_0144682 3300053077 Bacteria 1551
179 Ga0495612_0010020 3300053078 Bacteria 3836
180 Ga0495612_0042144 3300053078 Bacteria 1863
181 Ga0495655_0000001 3300053083 Bacteria 419518
182 Ga0495595_0019426 3300053084 Bacteria 2947
183 Ga0495619_0000008 3300053085 Bacteria 305999
184 Ga0495619_0000860 3300053085 Bacteria 19904
185 Ga0500641_0000041 3300053096 Bacteria 67704
186 Ga0500641_0000691 3300053096 Bacteria 12203
187 Ga0500628_000073 3300053129 Bacteria 26096
188 Ga0500658_0000311 3300053134 Bacteria 21774
189 Ga0501082_0024913 3300060353 Bacteria 5155
190 Ga0530510_0191568 3300061734 Bacteria 1518

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300005333 Ga0070677_10000080 Ga0070677_1000008016 362
2 3300025893 Ga0207682_10000045 Ga0207682_1000004516 362
3 3300053077 Ga0495601_0144682 Ga0495601_0144682_99_1478 370
4 3300046691 Ga0495670_0022303 Ga0495670_0022303_1627_2952 379
5 3300005841 Ga0068863_100026262 Ga0068863_1000262622 387
6 3300026088 Ga0207641_10008098 Ga0207641_100080983 387
7 3300035113 Ga0373936_0002887 Ga0373936_0002887_1576_2895 387
8 3300035170 Ga0373943_0001192 Ga0373943_0001192_6539_7858 387
9 3300035725 Ga0373947_0019614 Ga0373947_0019614_2553_3872 387
10 3300037068 Ga0373925_0010051 Ga0373925_0010051_4150_5469 387
11 3300045976 Ga0466967_0065000 Ga0466967_0065000_1803_3104 387
12 3300046461 Ga0495641_0014016 Ga0495641_0014016_2844_4163 387
13 3300046517 Ga0495630_0009353 Ga0495630_0009353_2636_3955 387
14 3300046536 Ga0495587_0053954 Ga0495587_0053954_52_1545 387
15 3300049578 Ga0501042_0069060 Ga0501042_0069060_1015_2454 388
16 3300049741 Ga0501079_0026297 Ga0501079_0026297_3006_4403 389
17 3300048905 Ga0496102_0000572 Ga0496102_0000572_32232_33683 390
18 3300048906 Ga0496103_0000008 Ga0496103_0000008_217_1668 390
19 3300053083 Ga0495655_0000001 Ga0495655_0000001_395807_397258 390
20 3300053129 Ga0500628_000073 Ga0500628_000073_2416_3867 390
21 3300053085 Ga0495619_0000008 Ga0495619_0000008_25109_26413 391
22 3300048917 Ga0496114_0000074 Ga0496114_0000074_35980_37410 392
23 3300048918 Ga0496115_0000367 Ga0496115_0000367_36024_37454 392
24 3300048903 Ga0496100_0028085 Ga0496100_0028085_1990_3327 393
25 3300048905 Ga0496102_0083964 Ga0496102_0083964_421_1758 393
26 3300048907 Ga0496104_0080195 Ga0496104_0080195_39_1376 393
27 3300048908 Ga0496105_0184178 Ga0496105_0184178_241_1578 393
28 3300048918 Ga0496115_0001237 Ga0496115_0001237_10779_12116 393
29 3300035089 Ga0373944_0002742 Ga0373944_0002742_417_1748 395
30 3300035170 Ga0373943_0002076 Ga0373943_0002076_430_1761 395
31 3300035692 Ga0373935_0013263 Ga0373935_0013263_63_1394 395
32 3300035725 Ga0373947_0046153 Ga0373947_0046153_1176_2507 395
33 3300037068 Ga0373925_0005621 Ga0373925_0005621_7202_8533 395
34 3300046454 Ga0495592_0041745 Ga0495592_0041745_1134_2465 395
35 3300046459 Ga0495629_0000593 Ga0495629_0000593_14516_15847 395
36 3300046461 Ga0495641_0001017 Ga0495641_0001017_4506_5837 395
37 3300046462 Ga0495651_0036294 Ga0495651_0036294_1924_3255 395
38 3300046473 Ga0495582_0000056 Ga0495582_0000056_45104_46435 395
39 3300046475 Ga0495639_0002894 Ga0495639_0002894_24_1355 395
40 3300046511 Ga0495608_0058145 Ga0495608_0058145_558_1889 395
41 3300046516 Ga0495628_0113517 Ga0495628_0113517_290_1621 395
42 3300046526 Ga0495666_0021081 Ga0495666_0021081_1791_3122 395
43 3300046529 Ga0495652_0060952 Ga0495652_0060952_270_1601 395
44 3300046531 Ga0495665_0000364 Ga0495665_0000364_11266_12597 395
45 3300046533 Ga0495640_0063287 Ga0495640_0063287_984_2315 395
46 3300046642 Ga0495634_0036830 Ga0495634_0036830_1033_2364 395
47 3300046663 Ga0495635_0014808 Ga0495635_0014808_701_2032 395
48 3300046663 Ga0495635_0051672 Ga0495635_0051672_960_2291 395
49 3300046678 Ga0495599_0083018 Ga0495599_0083018_192_1523 395
50 3300046681 Ga0495647_0029159 Ga0495647_0029159_662_1993 395
51 3300046683 Ga0495658_0023014 Ga0495658_0023014_1784_3115 395
52 3300046689 Ga0495613_0000401 Ga0495613_0000401_25030_26361 395
53 3300047319 Ga0495674_0061582 Ga0495674_0061582_1187_2518 395
54 3300047321 Ga0495676_0086495 Ga0495676_0086495_715_2046 395
55 3300047322 Ga0495680_0004249 Ga0495680_0004249_10006_11337 395
56 3300047322 Ga0495680_0010742 Ga0495680_0010742_3185_4516 395
57 3300047471 Ga0495684_0011366 Ga0495684_0011366_2352_3683 395
58 3300047471 Ga0495684_0076043 Ga0495684_0076043_223_1554 395
59 3300047673 Ga0495593_0010801 Ga0495593_0010801_1908_3239 395
60 3300048089 Ga0495614_0000769 Ga0495614_0000769_10766_12097 395
61 3300048907 Ga0496104_0039387 Ga0496104_0039387_1107_2438 395
62 3300048917 Ga0496114_0014099 Ga0496114_0014099_3930_5261 395
63 3300053077 Ga0495601_0050738 Ga0495601_0050738_287_1618 395
64 3300053078 Ga0495612_0010020 Ga0495612_0010020_2004_3335 395
65 3300053084 Ga0495595_0019426 Ga0495595_0019426_918_2249 395
66 3300053085 Ga0495619_0000860 Ga0495619_0000860_10005_11336 395
67 3300021384 Ga0213876_10004675 Ga0213876_100046755 396
68 3300049581 Ga0501047_0054347 Ga0501047_0054347_483_1943 396
69 3300005543 Ga0070672_100000025 Ga0070672_10000002513 397
70 3300053078 Ga0495612_0042144 Ga0495612_0042144_29_1411 397
71 3300039437 Ga0436365_1611971 Ga0436365_1611971_3732_5174 402
72 3300046529 Ga0495652_0047075 Ga0495652_0047075_896_2386 402
73 3300048912 Ga0496109_0065443 Ga0496109_0065443_1084_2490 402
74 3300048907 Ga0496104_0015295 Ga0496104_0015295_1506_2960 404
75 3300048908 Ga0496105_0021766 Ga0496105_0021766_3231_4685 404
76 3300048922 Ga0496119_0011579 Ga0496119_0011579_5568_7022 404
77 3300048924 Ga0496121_0017049 Ga0496121_0017049_1912_3366 404
78 3300048928 Ga0496125_0074853 Ga0496125_0074853_956_2410 404
79 3300046461 Ga0495641_0016868 Ga0495641_0016868_1177_2619 408
80 3300005842 Ga0068858_100000284 Ga0068858_10000028448 409
81 3300026035 Ga0207703_10000018 Ga0207703_10000018159 409
82 3300037418 Ga0395900_0133727 Ga0395900_0133727_458_1864 409
83 3300025944 Ga0207661_10020519 Ga0207661_100205192 411
84 3300025945 Ga0207679_10080834 Ga0207679_100808342 411
85 3300009148 Ga0105243_10009674 Ga0105243_100096746 412
86 3300039437 Ga0436365_1577912 Ga0436365_1577912_29_1456 416
87 3300039450 Ga0436363_1613861 Ga0436363_1613861_19_1443 416
88 3300046559 Ga0495667_0000047 Ga0495667_0000047_85930_87366 419
89 3300047322 Ga0495680_0004314 Ga0495680_0004314_11328_12764 419
90 3300005718 Ga0068866_10006910 Ga0068866_100069102 420
91 3300025899 Ga0207642_10002571 Ga0207642_100025713 420
92 3300049578 Ga0501042_0128876 Ga0501042_0128876_159_1619 421
93 3300060353 Ga0501082_0024913 Ga0501082_0024913_1959_3419 421
94 3300061734 Ga0530510_0191568 Ga0530510_0191568_44_1504 421
95 3300048907 Ga0496104_0004295 Ga0496104_0004295_8159_9649 422
96 3300048908 Ga0496105_0011797 Ga0496105_0011797_2691_4181 422
97 3300048912 Ga0496109_0088387 Ga0496109_0088387_1118_2608 422
98 3300048907 Ga0496104_0264521 Ga0496104_0264521_210_1616 423
99 3300048908 Ga0496105_0002091 Ga0496105_0002091_6430_7836 423
100 3300048913 Ga0496110_0045938 Ga0496110_0045938_1103_2527 423
101 3300048914 Ga0496111_0069001 Ga0496111_0069001_93_1517 423
102 3300048915 Ga0496112_0072695 Ga0496112_0072695_1014_2420 423
103 3300048916 Ga0496113_0127492 Ga0496113_0127492_68_1474 423
104 3300005441 Ga0070700_100030167 Ga0070700_1000301673 424
105 3300005535 Ga0070684_100000780 Ga0070684_10000078015 424
106 3300005577 Ga0068857_100002096 Ga0068857_10000209611 424
107 3300011119 Ga0105246_10084863 Ga0105246_100848632 424
108 3300026075 Ga0207708_10135483 Ga0207708_101354832 424
109 3300026116 Ga0207674_10007140 Ga0207674_100071409 424
110 3300046511 Ga0495608_0004777 Ga0495608_0004777_7733_9151 424
111 iso_pu_bacteria 2916971899 2916974664 424
112 3300044694 Ga0466963_0054751 Ga0466963_0054751_183_1619 425
113 3300045976 Ga0466967_0155392 Ga0466967_0155392_638_2074 425
114 3300045836 Ga0466958_0061503 Ga0466958_0061503_301_1731 426
115 iso_pu_bacteria 3001267043 3001267518 426
116 iso_pu_bacteria 3001272096 3001272990 426
117 iso_pu_bacteria 3006988479 3006989716 426
118 3300009176 Ga0105242_10000397 Ga0105242_1000039725 427
119 3300025934 Ga0207686_10000252 Ga0207686_1000025220 427
120 3300025935 Ga0207709_10002134 Ga0207709_100021349 427
121 3300025972 Ga0207668_10017013 Ga0207668_100170134 427
122 3300039450 Ga0436363_0123694 Ga0436363_0123694_237_1676 427
123 iso_pu_bacteria 2703719227 2705995825 427
124 iso_pu_bacteria 2738541358 2739154918 427
125 iso_pu_bacteria 2738543006 2739207710 427
126 iso_pu_bacteria 2965761152 2965765158 427
127 iso_pu_bacteria 2979083700 2979087553 427
128 iso_pu_bacteria 3006969106 3006970737 427
129 3300005548 Ga0070665_100000138 Ga0070665_100000138132 428
130 3300005842 Ga0068858_100000009 Ga0068858_10000000924 428
131 3300026035 Ga0207703_10000207 Ga0207703_1000020748 428
132 3300028379 Ga0268266_10000047 Ga0268266_1000004724 428
133 3300031548 Ga0307408_100000572 Ga0307408_10000057222 428
134 iso_pu_bacteria 2881644220 2881647701 428
135 3300044673 Ga0453683_0078475 Ga0453683_0078475_94_1521 429
136 3300046615 Ga0495656_0000210 Ga0495656_0000210_19322_20788 429
137 3300047322 Ga0495680_0000447 Ga0495680_0000447_10461_12008 429
138 3300002987 JGI25159J45721_1001107 JGI25159J45721_10011079 431
139 3300009092 Ga0105250_10001250 Ga0105250_1000125010 431
140 3300025284 Ga0209130_1001603 Ga0209130_100160310 431
141 3300025294 Ga0209025_1000519 Ga0209025_100051930 431
142 3300005437 Ga0070710_10078597 Ga0070710_100785972 432
143 3300031995 Ga0307409_100019846 Ga0307409_1000198463 432
144 3300032002 Ga0307416_100061405 Ga0307416_1000614052 432
145 3300042876 Ga0451577_0035879 Ga0451577_0035879_387_1835 432
146 3300044673 Ga0453683_0012716 Ga0453683_0012716_1459_2928 432
147 3300025922 Ga0207646_10055207 Ga0207646_100552074 434
148 3300049591 Ga0501075_0105481 Ga0501075_0105481_81_1562 434
149 3300025915 Ga0207693_10129571 Ga0207693_101295712 435
150 3300005985 Ga0081539_10022155 Ga0081539_100221553 441
151 iso_pu_bacteria 2513020052 2513235849 442
152 iso_pu_bacteria 2519899754 2520881259 442
153 iso_pu_bacteria 2643221600 2644010824 442
154 iso_pu_bacteria 2643221667 2644373696 442
155 iso_pu_bacteria 2643221716 2644643358 442
156 iso_pu_bacteria 2643221725 2644684104 442
157 iso_pu_bacteria 2738541279 2738734832 442
158 iso_pu_bacteria 2738541285 2738767591 442
159 iso_pu_bacteria 2738543007 2739216414 442
160 iso_pu_bacteria 2739367857 2739999602 442
161 iso_pu_bacteria 2739367858 2740004418 442
162 iso_pu_bacteria 2802428842 2802652000 442
163 iso_pu_bacteria 2816332280 2817414875 442
164 iso_pu_bacteria 2857613821 2857615152 442
165 iso_pu_bacteria 2857618242 2857621054 442
166 iso_pu_bacteria 2881359912 2881361995 442
167 iso_pu_bacteria 2903895155 2903895959 442
168 iso_pu_bacteria 2904419702 2904422011 442
169 iso_pu_bacteria 2904555929 2904559644 442
170 iso_pu_bacteria 2919191525 2919196262 442
171 iso_pu_bacteria 2919683626 2919684938 442
172 iso_pu_bacteria 2929150217 2929152018 442
173 iso_pu_bacteria 2958458903 2958460315 442
174 iso_pu_bacteria 2977268062 2977268750 442
175 iso_pu_bacteria 8054307821 8054312230 442
176 iso_pu_bacteria 8055419101 8055419331 442
177 iso_pu_bacteria 8055592153 8055592690 442
178 iso_pu_bacteria 8056440228 8056442699 442
179 3300044673 Ga0453683_0021859 Ga0453683_0021859_2521_3987 444
180 2162886007 SwRhRL2b_contig_1716529 SwRhRL2b_0474.00004200 446
181 3300003578 Ga0006562J51391_1007085 Ga0006562J51391_10070855 446
182 3300005288 Ga0065714_10004506 Ga0065714_100045063 446
183 3300005288 Ga0065714_10067310 Ga0065714_100673104 446
184 3300005288 Ga0065714_10071229 Ga0065714_100712292 446
185 3300005289 Ga0065704_10072462 Ga0065704_100724622 446
186 3300006942 Ga0099824_1000146 Ga0099824_10001468 446
187 3300006946 Ga0079104_1000126 Ga0079104_100012639 446
188 3300006948 Ga0099826_10000374 Ga0099826_1000037419 446
189 3300009036 Ga0105244_10000508 Ga0105244_100005085 446
190 3300013100 Ga0157373_10000038 Ga0157373_1000003869 446
191 3300013104 Ga0157370_10005833 Ga0157370_1000583313 446
192 3300013104 Ga0157370_10006335 Ga0157370_100063352 446
193 3300013104 Ga0157370_10017853 Ga0157370_100178532 446
194 3300013105 Ga0157369_10002379 Ga0157369_1000237911 446
195 3300013308 Ga0157375_10025347 Ga0157375_100253472 446
196 3300015261 Ga0182006_1004174 Ga0182006_10041744 446
197 3300017792 Ga0163161_10000083 Ga0163161_1000008335 446
198 3300025728 Ga0207655_1000045 Ga0207655_1000045165 446
199 3300027111 Ga0209281_1000424 Ga0209281_100042429 446
200 3300031548 Ga0307408_100000822 Ga0307408_1000008222 446
201 3300031731 Ga0307405_10000001 Ga0307405_10000001723 446
202 3300031824 Ga0307413_10000191 Ga0307413_1000019115 446
203 3300031852 Ga0307410_10000085 Ga0307410_1000008522 446
204 3300031901 Ga0307406_10000029 Ga0307406_1000002974 446
205 3300031901 Ga0307406_10051272 Ga0307406_100512722 446
206 3300031903 Ga0307407_10004763 Ga0307407_100047635 446
207 3300032002 Ga0307416_100026507 Ga0307416_1000265072 446
208 3300032004 Ga0307414_10000005 Ga0307414_10000005221 446
209 3300032004 Ga0307414_10001209 Ga0307414_100012095 446
210 3300032005 Ga0307411_10000002 Ga0307411_1000000236 446
211 3300033180 Ga0307510_10014167 Ga0307510_100141677 446
212 3300041407 Ga0439447_000057 Ga0439447_000057_27614_29077 446
213 3300046517 Ga0495630_0079832 Ga0495630_0079832_225_1826 446
214 3300048919 Ga0496116_0000212 Ga0496116_0000212_10140_11603 446
215 3300048924 Ga0496121_0011045 Ga0496121_0011045_8543_10006 446
216 3300048927 Ga0496124_0110378 Ga0496124_0110378_534_1997 446
217 3300048928 Ga0496125_0000062 Ga0496125_0000062_247837_249300 446
218 3300048928 Ga0496125_0094568 Ga0496125_0094568_637_2100 446
219 3300048929 Ga0496126_0005976 Ga0496126_0005976_115_1578 446
220 3300049663 Ga0501223_001183 Ga0501223_001183_4493_5953 446
221 3300049671 Ga0501238_000153 Ga0501238_000153_4633_6096 446
222 3300049679 Ga0501249_000005 Ga0501249_000005_182561_184024 446
223 3300049758 Ga0501241_008084 Ga0501241_008084_58_1521 446
224 3300049763 Ga0501266_000021 Ga0501266_000021_55028_56491 446
225 3300049766 Ga0501269_002600 Ga0501269_002600_516_1979 446
226 3300049776 Ga0501280_000448 Ga0501280_000448_2879_4342 446
227 3300053096 Ga0500641_0000041 Ga0500641_0000041_39291_40754 446
228 3300053096 Ga0500641_0000691 Ga0500641_0000691_779_2242 446
229 3300053134 Ga0500658_0000311 Ga0500658_0000311_12651_14114 446

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02875

Mur_ligase_C

Mur ligase, glutamate ligase domain

361

494

0.94

PF08245

Mur_ligase_M

Mur ligase middle domain

111

337

0.89

PF01225

Mur_ligase

Mur ligase family, catalytic domain

35

99

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
7waf-assembly1.cif.gz_B trichodesmium erythraeum cyanophycin synthetase 1 (tecpha1) with atpgammas and 4x(beta-asp-arg) 0.8156 73 413
4c12-assembly1.cif.gz_A x-ray crystal structure of staphylococcus aureus mure with udp-murnac- ala-glu-lys and adp 0.8037 4 443
7lgj-assembly1.cif.gz_A cyanophycin synthetase 1 from synechocystis sp. utex2470 with adpcp and 8x(asp-arg)-nh2 0.7963 73 445
7lg5-assembly1.cif.gz_A synechocystis sp. utex2470 cyanophycin synthetase 1 with atp 0.7939 73 445
4c12-assembly1.cif.gz_A x-ray crystal structure of staphylococcus aureus mure with udp-murnac- ala-glu-lys and adp 0.7914 4 443
ID Description Score Start End Superfamily
3zl8A01 Alpha Beta;3-Layer(aba) Sandwich;Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase; Chain: A, domain 1;MurE/MurF, N-terminal domain 0.9647 26 69 3.40.1390.10
4c13A02 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.958 73 288 3.40.1190.10
2wtzD03 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.9498 300 439 3.90.190.20
1e8cB03 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.9483 290 434 3.90.190.20
4bubB03 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.9473 298 443 3.90.190.20
ID Description Score Start End GO Terms
AF-A0A3B9CLL8-F1-model_v4 deleted 0.991 73 352
AF-K1UK52-F1-model_v4 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 0.9875 195 405 GO:0005524
GO:0009058
GO:0016881
AF-A0A353UFM6-F1-model_v4 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 0.9818 2 69 GO:0009058
GO:0016881
AF-A0A3B9CLL8-F1-model_v4 deleted 0.9805 73 352
AF-A0A699RD99-F1-model_v4 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic 0.9799 302 391 GO:0009058
GO:0016881

Feature Viewer

pLDDT pTM Quality
89.74 0.78 High
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Predicted Structure (AlphaFold2)

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