F341510
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 228 | 172 | 456 | 358 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2835188231|2835189938 |
| Length | 395 |
| Sequence | PAPAPVPAAGPGTGPAAGDVLLALAADPASDLVGLLAALCDAESVSGGETALADAIEAVLRAQPHLAVHRDGDCVVARTDLGRSRRVVLAGHIDTVPLADPPNLPTRLVGEGPDAELWGRGTVDMKGGVAVMLALAVELGAPGREPASDLTWVFYDHEEVEAERNGLGRLSRNAPELLRGDLAILGEPTAAGIEGGCNGTMRARVTTRGVAAHSARAWTGVNAIHAAAPVLQRLADYVPREVEVDGLVYRESLNAVLVDGGVAANVIPDRCTVTVNYRFAPSLTVAQAEAHVREVLDGFDVEITDAAGGARPGLDDPLALEFAEAVLAVTGGRPKPKYGWTDVARFADLGIPAVNFGPGDPLLAHKDDERVPVGQLALCRDALRAWLLGPVDPAA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300003285 | Grassland soil microbial communities from Hopland, California, USA - Sample H3_Rhizo_39 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Rhizosphere |
| 2 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 3 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 4 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 7 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 9 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 10 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 11 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 12 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 14 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 15 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 16 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 17 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 18 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 20 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 21 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 22 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 23 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 24 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 25 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 26 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 27 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 28 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 29 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 30 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 31 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 42 | 3300030522 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM | Metagenome | Unclassified |
| 43 | 3300030732 | Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 | Metagenome | Rhizosphere |
| 44 | 3300030733 | Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 | Metagenome | Rhizosphere |
| 45 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 46 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 47 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 48 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 49 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 50 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 51 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 52 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 53 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 54 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 55 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 56 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 57 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 58 | 3300034957 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 | Metagenome | Rhizosphere |
| 59 | 3300035088 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 | Metagenome | Rhizosphere |
| 60 | 3300035091 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 | Metagenome | Rhizosphere |
| 61 | 3300035111 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 62 | 3300035113 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 63 | 3300035120 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 | Metagenome | Rhizosphere |
| 64 | 3300035207 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 | Metagenome | Rhizosphere |
| 65 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 66 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 67 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 68 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 69 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 70 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 71 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 72 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 73 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 74 | 3300041451 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG | Metagenome | Rhizoplane |
| 75 | 3300041453 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG | Metagenome | Rhizoplane |
| 76 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 77 | 3300042007 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 | Metagenome | Rhizosphere |
| 78 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 79 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 80 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 81 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 82 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 83 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 84 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 85 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 86 | 3300046453 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046461 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046473 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046475 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046531 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300048089 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 108 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 109 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 110 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 111 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 112 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 113 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 114 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 115 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 116 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 117 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 118 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 119 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 120 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 121 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 122 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 123 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 124 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 125 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 126 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 127 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 128 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 129 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 130 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 131 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 132 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 133 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 134 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 135 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 136 | 3300053093 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere | Metagenome | Endosphere |
| 137 | 3300053096 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere | Metagenome | Endosphere |
| 138 | 3300053102 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere | Metagenome | Endosphere |
| 139 | 3300053104 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere | Metagenome | Endosphere |
| 140 | 3300053109 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere | Metagenome | Endosphere |
| 141 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 142 | 3300053149 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere | Metagenome | Endosphere |
| 143 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 144 | 2835188231 | Isoptericola variabilis JZ7 | Isolate | Unclassified |
| 145 | 2643221613 | Oerskovia sp. Root22 | Isolate | Unclassified |
| 146 | 2643221690 | Cellulomonas sp. Root485 | Isolate | Unclassified |
| 147 | 2643221694 | Cellulomonas sp. Root137 | Isolate | Unclassified |
| 148 | 2643221721 | Oerskovia sp. Root918 | Isolate | Unclassified |
| 149 | 2643221722 | Cellulomonas sp. Root930 | Isolate | Unclassified |
| 150 | 2738541272 | Promicromonospora sp. AC04 | Isolate | Unclassified |
| 151 | 2738543027 | Promicromonospora sp. CF082 | Isolate | Unclassified |
| 152 | 2739367654 | Promicromonospora sp. YR516 | Isolate | Unclassified |
| 153 | 2751185734 | Saccharothrix sp. NRRL B-16314 | Isolate | Rhizosphere |
| 154 | 2751185782 | Actinoplanes subtropicus NRRL B-24665 | Isolate | Rhizosphere |
| 155 | 2758568522 | Promicromonospora thailandica SAI-039 | Isolate | Unclassified |
| 156 | 2758568621 | Promicromonospora sukumoe SAI-064 | Isolate | Unclassified |
| 157 | 2808606394 | Promicromonospora sp. C35 | Isolate | Unclassified |
| 158 | 2811994880 | Cellulomonas sp. SLBN-39 | Isolate | Unclassified |
| 159 | 2832004796 | Micromonospora endophytica JCM 18317 | Isolate | Unclassified |
| 160 | 2839986021 | Cellulosimicrobium cellulans JZ5 | Isolate | Unclassified |
| 161 | 2848551377 | Brachybacterium saurashtrense DSM 23186 | Isolate | Unclassified |
| 162 | 2858902515 | Micromonospora sp. MW-13 | Isolate | Rhizosphere |
| 163 | 2866065130 | Micromonospora endophytica DSM 45430 | Isolate | Unclassified |
| 164 | 2870721527 | Saccharothrix ecbatanensis DSM 45486 | Isolate | Rhizosphere |
| 165 | 2884994152 | Cellulomonas sp. H30R-01 | Isolate | Rhizosphere |
| 166 | 2887443736 | Ruania rhizosphaerae LNNU 22110 | Isolate | Rhizosphere |
| 167 | 2932431166 | Cellulosimicrobium sp. 4261 | Isolate | Rhizosphere |
| 168 | 2935890801 | Oerskovia enterophila 3230 | Isolate | Rhizosphere |
| 169 | 8003856774 | Micromonospora echinofusca MPMI6 | Isolate | Unclassified |
| 170 | 8003870546 | Micromonospora tarensis STR1s_6 | Isolate | Rhizosphere |
| 171 | 8055412473 | Micromonospora phytophila DSM 105363 | Isolate | Nodule |
| 172 | 8056579771 | Promicromonospora iranensis UTMC 00792 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 86.4 |
| Metatranscriptomes | 0.88 |
| Isolates | 12.72 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 11.84 |
| Nodule | 0.44 |
| Rhizoplane | 3.51 |
| Rhizosphere | 60.53 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0007423J48922_100135 | 3300003285 | Bacteria | 7860 |
| 2 | Ga0007423J48922_100136 | 3300003285 | Bacteria | 7298 |
| 3 | rootL2_10029140 | 3300003322 | Bacteria | 1568 |
| 4 | rootL2_10138590 | 3300003322 | Bacteria | 2121 |
| 5 | rootL2_10150056 | 3300003322 | Bacteria | 3930 |
| 6 | Ga0068869_100198476 | 3300005334 | Bacteria | 1581 |
| 7 | Ga0070668_100000772 | 3300005347 | Bacteria | 22052 |
| 8 | Ga0070668_100047904 | 3300005347 | Bacteria | 3287 |
| 9 | Ga0070667_100054666 | 3300005367 | Bacteria | 3372 |
| 10 | Ga0070667_100058087 | 3300005367 | Bacteria | 3271 |
| 11 | Ga0070667_100095074 | 3300005367 | Bacteria | 2568 |
| 12 | Ga0070667_100095403 | 3300005367 | Bacteria | 2564 |
| 13 | Ga0070709_10007219 | 3300005434 | Bacteria | 6087 |
| 14 | Ga0070714_100098089 | 3300005435 | Bacteria | 2577 |
| 15 | Ga0070713_100027443 | 3300005436 | Bacteria | 4482 |
| 16 | Ga0070713_100029691 | 3300005436 | Bacteria | 4332 |
| 17 | Ga0070710_10040994 | 3300005437 | Bacteria | 2554 |
| 18 | Ga0070700_100000031 | 3300005441 | Bacteria | 117217 |
| 19 | Ga0070679_100074743 | 3300005530 | Bacteria | 3379 |
| 20 | Ga0070664_100123384 | 3300005564 | Bacteria | 2270 |
| 21 | Ga0068852_100399424 | 3300005616 | Bacteria | 1352 |
| 22 | Ga0068860_100000741 | 3300005843 | Bacteria | 37221 |
| 23 | Ga0068862_100143099 | 3300005844 | Bacteria | 2123 |
| 24 | Ga0081540_1016696 | 3300005983 | Bacteria | 4578 |
| 25 | Ga0081539_10000938 | 3300005985 | Bacteria | 54684 |
| 26 | Ga0081539_10001138 | 3300005985 | Bacteria | 48256 |
| 27 | Ga0081539_10001842 | 3300005985 | Bacteria | 33429 |
| 28 | Ga0081539_10002602 | 3300005985 | Bacteria | 24742 |
| 29 | Ga0081539_10007280 | 3300005985 | Bacteria | 10157 |
| 30 | Ga0070717_10072049 | 3300006028 | Bacteria | 2884 |
| 31 | Ga0075365_10010178 | 3300006038 | Bacteria | 5461 |
| 32 | Ga0075365_10032938 | 3300006038 | Bacteria | 3335 |
| 33 | Ga0075365_10057867 | 3300006038 | Bacteria | 2579 |
| 34 | Ga0075365_10152417 | 3300006038 | Bacteria | 1608 |
| 35 | Ga0075363_100037738 | 3300006048 | Bacteria | 2538 |
| 36 | Ga0075364_10031896 | 3300006051 | Bacteria | 3385 |
| 37 | Ga0075364_10035531 | 3300006051 | Bacteria | 3220 |
| 38 | Ga0075364_10053093 | 3300006051 | Bacteria | 2649 |
| 39 | Ga0075364_10059078 | 3300006051 | Bacteria | 2513 |
| 40 | Ga0070712_100057739 | 3300006175 | Bacteria | 2728 |
| 41 | Ga0075367_10057718 | 3300006178 | Bacteria | 2308 |
| 42 | Ga0075370_10008645 | 3300006353 | Bacteria | 5248 |
| 43 | Ga0105247_10145821 | 3300009101 | Bacteria | 1555 |
| 44 | Ga0157370_10155943 | 3300013104 | Bacteria | 2124 |
| 45 | Ga0157378_10241646 | 3300013297 | Bacteria | 1725 |
| 46 | Ga0163163_10146488 | 3300014325 | Bacteria | 2405 |
| 47 | Ga0207692_10002246 | 3300025898 | Bacteria | 7391 |
| 48 | Ga0207692_10034878 | 3300025898 | Bacteria | 2439 |
| 49 | Ga0207684_10316361 | 3300025910 | Bacteria | 1345 |
| 50 | Ga0207693_10067844 | 3300025915 | Bacteria | 2793 |
| 51 | Ga0207652_10058921 | 3300025921 | Bacteria | 3309 |
| 52 | Ga0207652_10340636 | 3300025921 | Bacteria | 1353 |
| 53 | Ga0207700_10033402 | 3300025928 | Bacteria | 3681 |
| 54 | Ga0207700_10060657 | 3300025928 | Bacteria | 2865 |
| 55 | Ga0207664_10011176 | 3300025929 | Bacteria | 6365 |
| 56 | Ga0207664_10018101 | 3300025929 | Bacteria | 5176 |
| 57 | Ga0207665_10002109 | 3300025939 | Bacteria | 13447 |
| 58 | Ga0207668_10022590 | 3300025972 | Bacteria | 4030 |
| 59 | Ga0207658_10060440 | 3300025986 | Bacteria | 2828 |
| 60 | Ga0207708_10000046 | 3300026075 | Bacteria | 116515 |
| 61 | Ga0268266_10454280 | 3300028379 | Bacteria | 1218 |
| 62 | Ga0268264_10000943 | 3300028381 | Bacteria | 30160 |
| 63 | Ga0307515_10000065 | 3300028794 | Bacteria | 244497 |
| 64 | Ga0307515_10000598 | 3300028794 | Bacteria | 84186 |
| 65 | Ga0307515_10026553 | 3300028794 | Bacteria | 9961 |
| 66 | Ga0307515_10030408 | 3300028794 | Bacteria | 9068 |
| 67 | Ga0307515_10121042 | 3300028794 | Bacteria | 2964 |
| 68 | Ga0307512_10001844 | 3300030522 | Bacteria | 28504 |
| 69 | Ga0307512_10004293 | 3300030522 | Bacteria | 15725 |
| 70 | Ga0316176_1032343 | 3300030732 | Bacteria | 5890 |
| 71 | Ga0314311_1097076 | 3300030733 | Bacteria | 6104 |
| 72 | Ga0265327_10003631 | 3300031251 | Bacteria | 14515 |
| 73 | Ga0307513_10014971 | 3300031456 | Bacteria | 9421 |
| 74 | Ga0307513_10047253 | 3300031456 | Bacteria | 4683 |
| 75 | Ga0307509_10086517 | 3300031507 | Bacteria | 3223 |
| 76 | Ga0307508_10004400 | 3300031616 | Bacteria | 13782 |
| 77 | Ga0307508_10017796 | 3300031616 | Bacteria | 6464 |
| 78 | Ga0307508_10043850 | 3300031616 | Bacteria | 4005 |
| 79 | Ga0307508_10103902 | 3300031616 | Bacteria | 2438 |
| 80 | Ga0307516_10000753 | 3300031730 | Bacteria | 44155 |
| 81 | Ga0307516_10006179 | 3300031730 | Bacteria | 14095 |
| 82 | Ga0307516_10065237 | 3300031730 | Bacteria | 3517 |
| 83 | Ga0307516_10155857 | 3300031730 | Bacteria | 2039 |
| 84 | Ga0307413_10278854 | 3300031824 | Bacteria | 1256 |
| 85 | Ga0307412_10072908 | 3300031911 | Bacteria | 2348 |
| 86 | Ga0307409_100038947 | 3300031995 | Bacteria | 3522 |
| 87 | Ga0307409_100039505 | 3300031995 | Bacteria | 3503 |
| 88 | Ga0307409_100106830 | 3300031995 | Bacteria | 2337 |
| 89 | Ga0307409_100158356 | 3300031995 | Bacteria | 1977 |
| 90 | Ga0307416_100068995 | 3300032002 | Bacteria | 2924 |
| 91 | Ga0307411_10050775 | 3300032005 | Bacteria | 2703 |
| 92 | Ga0307415_100044002 | 3300032126 | Bacteria | 2982 |
| 93 | Ga0307415_100184649 | 3300032126 | Bacteria | 1640 |
| 94 | Ga0307507_10012000 | 3300033179 | Bacteria | 10805 |
| 95 | Ga0307507_10043875 | 3300033179 | Bacteria | 4430 |
| 96 | Ga0307510_10137983 | 3300033180 | Bacteria | 2091 |
| 97 | Ga0373938_0012845 | 3300034957 | Bacteria | 1579 |
| 98 | Ga0373940_0001003 | 3300035088 | Bacteria | 4833 |
| 99 | Ga0373951_0000213 | 3300035091 | Bacteria | 20460 |
| 100 | Ga0373923_0005738 | 3300035111 | Bacteria | 4234 |
| 101 | Ga0373936_0002222 | 3300035113 | Bacteria | 7247 |
| 102 | Ga0373957_0015938 | 3300035120 | Bacteria | 2594 |
| 103 | Ga0373942_0000033 | 3300035207 | Bacteria | 26057 |
| 104 | Ga0373942_0000929 | 3300035207 | Bacteria | 8041 |
| 105 | Ga0373935_0004701 | 3300035692 | Bacteria | 8035 |
| 106 | Ga0373935_0250356 | 3300035692 | Bacteria | 1239 |
| 107 | Ga0373933_0187782 | 3300035724 | Bacteria | 1319 |
| 108 | Ga0373947_0017716 | 3300035725 | Bacteria | 4098 |
| 109 | Ga0373937_0462742 | 3300036401 | Bacteria | 1204 |
| 110 | Ga0373925_0055184 | 3300037068 | Bacteria | 2973 |
| 111 | Ga0395898_0012990 | 3300037466 | Bacteria | 8585 |
| 112 | Ga0395905_0062995 | 3300037471 | Bacteria | 3469 |
| 113 | Ga0436364_0248917 | 3300037853 | Bacteria | 3329 |
| 114 | Ga0436364_0398074 | 3300037853 | Bacteria | 1089 |
| 115 | Ga0395901_0027695 | 3300038443 | Bacteria | 5826 |
| 116 | Ga0451791_1294675 | 3300041451 | Bacteria | 2109 |
| 117 | Ga0451797_1254811 | 3300041453 | Bacteria | 1178 |
| 118 | Ga0451853_0374029 | 3300041512 | Bacteria | 2309 |
| 119 | Ga0439449_0016626 | 3300042007 | Bacteria | 2764 |
| 120 | Ga0466972_0007435 | 3300044658 | Bacteria | 5506 |
| 121 | Ga0466965_0002418 | 3300044683 | Bacteria | 7928 |
| 122 | Ga0466965_0002838 | 3300044683 | Bacteria | 7467 |
| 123 | Ga0466965_0049076 | 3300044683 | Bacteria | 2092 |
| 124 | Ga0466965_0092840 | 3300044683 | Bacteria | 1537 |
| 125 | Ga0466961_0086931 | 3300044693 | Bacteria | 1976 |
| 126 | Ga0466963_0277454 | 3300044694 | Bacteria | 1178 |
| 127 | Ga0466970_0023494 | 3300044765 | Bacteria | 3220 |
| 128 | Ga0466957_0029573 | 3300044842 | Bacteria | 3268 |
| 129 | Ga0466960_0049560 | 3300044901 | Bacteria | 2022 |
| 130 | Ga0466958_0176808 | 3300045836 | Bacteria | 1353 |
| 131 | Ga0495627_020467 | 3300046453 | Bacteria | 2204 |
| 132 | Ga0495629_0241565 | 3300046459 | Bacteria | 1243 |
| 133 | Ga0495641_0016973 | 3300046461 | Bacteria | 3812 |
| 134 | Ga0495641_0080444 | 3300046461 | Bacteria | 1460 |
| 135 | Ga0495582_0006059 | 3300046473 | Bacteria | 6738 |
| 136 | Ga0495639_0050219 | 3300046475 | Bacteria | 1894 |
| 137 | Ga0495662_0006576 | 3300046476 | Bacteria | 5803 |
| 138 | Ga0495652_0123601 | 3300046529 | Bacteria | 2059 |
| 139 | Ga0495665_0019646 | 3300046531 | Bacteria | 3633 |
| 140 | Ga0495640_0038929 | 3300046533 | Bacteria | 3340 |
| 141 | Ga0495587_0034729 | 3300046536 | Bacteria | 3039 |
| 142 | Ga0495645_0061696 | 3300046543 | Bacteria | 2716 |
| 143 | Ga0495634_0017237 | 3300046642 | Bacteria | 5157 |
| 144 | Ga0495646_0121116 | 3300046680 | Bacteria | 1480 |
| 145 | Ga0495613_0007628 | 3300046689 | Bacteria | 8047 |
| 146 | Ga0495624_0010514 | 3300046690 | Bacteria | 6378 |
| 147 | Ga0495581_0030949 | 3300047315 | Bacteria | 3100 |
| 148 | Ga0495604_0042364 | 3300047317 | Bacteria | 3568 |
| 149 | Ga0495674_0108626 | 3300047319 | Bacteria | 2354 |
| 150 | Ga0495674_0112587 | 3300047319 | Bacteria | 2305 |
| 151 | Ga0495680_0023500 | 3300047322 | Bacteria | 5123 |
| 152 | Ga0495675_0226773 | 3300047444 | Bacteria | 1128 |
| 153 | Ga0495614_0101149 | 3300048089 | Bacteria | 1260 |
| 154 | Ga0496104_0123105 | 3300048907 | Bacteria | 2490 |
| 155 | Ga0496105_0157155 | 3300048908 | Bacteria | 1867 |
| 156 | Ga0496108_0000149 | 3300048911 | Bacteria | 67412 |
| 157 | Ga0496109_0103140 | 3300048912 | Bacteria | 2647 |
| 158 | Ga0496114_0074885 | 3300048917 | Bacteria | 2850 |
| 159 | Ga0496114_0128098 | 3300048917 | Bacteria | 2190 |
| 160 | Ga0496117_0023817 | 3300048920 | Bacteria | 4862 |
| 161 | Ga0496119_0046486 | 3300048922 | Bacteria | 2710 |
| 162 | Ga0496120_0061349 | 3300048923 | Bacteria | 2099 |
| 163 | Ga0496122_0001262 | 3300048925 | Bacteria | 42353 |
| 164 | Ga0496122_0017612 | 3300048925 | Bacteria | 6664 |
| 165 | Ga0496123_0000275 | 3300048926 | Bacteria | 101770 |
| 166 | Ga0496124_0000370 | 3300048927 | Bacteria | 82276 |
| 167 | Ga0496125_0000015 | 3300048928 | Bacteria | 516648 |
| 168 | Ga0496125_0013536 | 3300048928 | Bacteria | 8015 |
| 169 | Ga0501034_0056934 | 3300049571 | Bacteria | 3932 |
| 170 | Ga0501034_0252028 | 3300049571 | Bacteria | 1710 |
| 171 | Ga0501046_0004091 | 3300049580 | Bacteria | 13295 |
| 172 | Ga0501047_0009853 | 3300049581 | Bacteria | 9029 |
| 173 | Ga0501047_0154623 | 3300049581 | Bacteria | 2168 |
| 174 | Ga0501068_0040554 | 3300049584 | Bacteria | 2796 |
| 175 | Ga0501079_0293653 | 3300049741 | Bacteria | 1271 |
| 176 | Ga0501035_0047426 | 3300049822 | Bacteria | 3856 |
| 177 | Ga0501044_0009395 | 3300049823 | Bacteria | 10653 |
| 178 | Ga0501045_0108565 | 3300049824 | Bacteria | 2057 |
| 179 | nmdc:mga03n38_146941_c1 | 3300050490 | Bacteria | 1183 |
| 180 | nmdc:mga00v17_39613_c1 | 3300050491 | Bacteria | 2823 |
| 181 | nmdc:mga0yw44_109868_c1 | 3300050492 | Bacteria | 1766 |
| 182 | nmdc:mga0yw44_12213_c1 | 3300050492 | Bacteria | 4468 |
| 183 | nmdc:mga0yw44_191834_c1 | 3300050492 | Bacteria | 1348 |
| 184 | nmdc:mga0yw44_996_c1 | 3300050492 | Bacteria | 10819 |
| 185 | nmdc:mga06z11_54538_c1 | 3300050494 | Bacteria | 2061 |
| 186 | nmdc:mga07m45_15000_c1 | 3300050496 | Bacteria | 4137 |
| 187 | Ga0495612_0006236 | 3300053078 | Bacteria | 4911 |
| 188 | Ga0495595_0020377 | 3300053084 | Bacteria | 2886 |
| 189 | Ga0495619_0028459 | 3300053085 | Bacteria | 3605 |
| 190 | Ga0500644_0006235 | 3300053088 | Bacteria | 3047 |
| 191 | Ga0500651_0056517 | 3300053093 | Bacteria | 2457 |
| 192 | Ga0500641_0038748 | 3300053096 | Bacteria | 1917 |
| 193 | Ga0500554_011398 | 3300053102 | Bacteria | 2201 |
| 194 | Ga0500556_0013622 | 3300053104 | Bacteria | 2466 |
| 195 | Ga0500569_031799 | 3300053109 | Bacteria | 1487 |
| 196 | Ga0500573_0087238 | 3300053140 | Bacteria | 1767 |
| 197 | Ga0500600_0037566 | 3300053149 | Bacteria | 2807 |
| 198 | Ga0501082_0104458 | 3300060353 | Bacteria | 2450 |
| 199 | Ga0501082_0263052 | 3300060353 | Bacteria | 1501 |
| 200 | 2835189938 | 2835188231 | Bacteria | 3476928 |
| 201 | 2644082790 | 2643221613 | Bacteria | 4622396 |
| 202 | 2644505119 | 2643221690 | Bacteria | 4654705 |
| 203 | 2644527442 | 2643221694 | Bacteria | 4392972 |
| 204 | 2644665745 | 2643221721 | Bacteria | 4486924 |
| 205 | 2644667490 | 2643221722 | Bacteria | 4247614 |
| 206 | 2738693168 | 2738541272 | Bacteria | 6848551 |
| 207 | 2739323257 | 2738543027 | Bacteria | 6409078 |
| 208 | 2739607866 | 2739367654 | Bacteria | 6049412 |
| 209 | 2753073275 | 2751185734 | Bacteria | 8863695 |
| 210 | 2753271479 | 2751185782 | Bacteria | 11227053 |
| 211 | 2760304131 | 2758568522 | Bacteria | 5953541 |
| 212 | 2760621920 | 2758568621 | Bacteria | 5967089 |
| 213 | 2809026762 | 2808606394 | Bacteria | 6248540 |
| 214 | 2812362279 | 2811994880 | Bacteria | 4147780 |
| 215 | 2832007108 | 2832004796 | Bacteria | 6538017 |
| 216 | 2839986979 | 2839986021 | Bacteria | 3685650 |
| 217 | 2848551960 | 2848551377 | Bacteria | 3720646 |
| 218 | 2858903122 | 2858902515 | Bacteria | 7086037 |
| 219 | 2866066801 | 2866065130 | Bacteria | 6518152 |
| 220 | 2870729090 | 2870721527 | Bacteria | 9689237 |
| 221 | 2884994433 | 2884994152 | Bacteria | 4492978 |
| 222 | 2887444492 | 2887443736 | Bacteria | 4426037 |
| 223 | 2932433855 | 2932431166 | Bacteria | 4215299 |
| 224 | 2935892546 | 2935890801 | Bacteria | 4593001 |
| 225 | 8003862105 | 8003856774 | Bacteria | 7675274 |
| 226 | 8003872282 | 8003870546 | Bacteria | 7396674 |
| 227 | 8055415827 | 8055412473 | Bacteria | 6257500 |
| 228 | 8056580857 | 8056579771 | Bacteria | 5840325 |
| 229 | Ga0007423J48922_100135 | |||
| 230 | Ga0007423J48922_100136 | |||
| 231 | rootL2_10029140 | |||
| 232 | rootL2_10138590 | |||
| 233 | rootL2_10150056 | |||
| 234 | Ga0068869_100198476 | |||
| 235 | Ga0070668_100000772 | |||
| 236 | Ga0070668_100047904 | |||
| 237 | Ga0070667_100054666 | |||
| 238 | Ga0070667_100058087 | |||
| 239 | Ga0070667_100095074 | |||
| 240 | Ga0070667_100095403 | |||
| 241 | Ga0070709_10007219 | |||
| 242 | Ga0070714_100098089 | |||
| 243 | Ga0070713_100027443 | |||
| 244 | Ga0070713_100029691 | |||
| 245 | Ga0070710_10040994 | |||
| 246 | Ga0070700_100000031 | |||
| 247 | Ga0070679_100074743 | |||
| 248 | Ga0070664_100123384 | |||
| 249 | Ga0068852_100399424 | |||
| 250 | Ga0068860_100000741 | |||
| 251 | Ga0068862_100143099 | |||
| 252 | Ga0081540_1016696 | |||
| 253 | Ga0081539_10000938 | |||
| 254 | Ga0081539_10001138 | |||
| 255 | Ga0081539_10001842 | |||
| 256 | Ga0081539_10002602 | |||
| 257 | Ga0081539_10007280 | |||
| 258 | Ga0070717_10072049 | |||
| 259 | Ga0075365_10010178 | |||
| 260 | Ga0075365_10032938 | |||
| 261 | Ga0075365_10057867 | |||
| 262 | Ga0075365_10152417 | |||
| 263 | Ga0075363_100037738 | |||
| 264 | Ga0075364_10031896 | |||
| 265 | Ga0075364_10035531 | |||
| 266 | Ga0075364_10053093 | |||
| 267 | Ga0075364_10059078 | |||
| 268 | Ga0070712_100057739 | |||
| 269 | Ga0075367_10057718 | |||
| 270 | Ga0075370_10008645 | |||
| 271 | Ga0105247_10145821 | |||
| 272 | Ga0157370_10155943 | |||
| 273 | Ga0157378_10241646 | |||
| 274 | Ga0163163_10146488 | |||
| 275 | Ga0207692_10002246 | |||
| 276 | Ga0207692_10034878 | |||
| 277 | Ga0207684_10316361 | |||
| 278 | Ga0207693_10067844 | |||
| 279 | Ga0207652_10058921 | |||
| 280 | Ga0207652_10340636 | |||
| 281 | Ga0207700_10033402 | |||
| 282 | Ga0207700_10060657 | |||
| 283 | Ga0207664_10011176 | |||
| 284 | Ga0207664_10018101 | |||
| 285 | Ga0207665_10002109 | |||
| 286 | Ga0207668_10022590 | |||
| 287 | Ga0207658_10060440 | |||
| 288 | Ga0207708_10000046 | |||
| 289 | Ga0268266_10454280 | |||
| 290 | Ga0268264_10000943 | |||
| 291 | Ga0307515_10000065 | |||
| 292 | Ga0307515_10000598 | |||
| 293 | Ga0307515_10026553 | |||
| 294 | Ga0307515_10030408 | |||
| 295 | Ga0307515_10121042 | |||
| 296 | Ga0307512_10001844 | |||
| 297 | Ga0307512_10004293 | |||
| 298 | Ga0316176_1032343 | |||
| 299 | Ga0314311_1097076 | |||
| 300 | Ga0265327_10003631 | |||
| 301 | Ga0307513_10014971 | |||
| 302 | Ga0307513_10047253 | |||
| 303 | Ga0307509_10086517 | |||
| 304 | Ga0307508_10004400 | |||
| 305 | Ga0307508_10017796 | |||
| 306 | Ga0307508_10043850 | |||
| 307 | Ga0307508_10103902 | |||
| 308 | Ga0307516_10000753 | |||
| 309 | Ga0307516_10006179 | |||
| 310 | Ga0307516_10065237 | |||
| 311 | Ga0307516_10155857 | |||
| 312 | Ga0307413_10278854 | |||
| 313 | Ga0307412_10072908 | |||
| 314 | Ga0307409_100038947 | |||
| 315 | Ga0307409_100039505 | |||
| 316 | Ga0307409_100106830 | |||
| 317 | Ga0307409_100158356 | |||
| 318 | Ga0307416_100068995 | |||
| 319 | Ga0307411_10050775 | |||
| 320 | Ga0307415_100044002 | |||
| 321 | Ga0307415_100184649 | |||
| 322 | Ga0307507_10012000 | |||
| 323 | Ga0307507_10043875 | |||
| 324 | Ga0307510_10137983 | |||
| 325 | Ga0373938_0012845 | |||
| 326 | Ga0373940_0001003 | |||
| 327 | Ga0373951_0000213 | |||
| 328 | Ga0373923_0005738 | |||
| 329 | Ga0373936_0002222 | |||
| 330 | Ga0373957_0015938 | |||
| 331 | Ga0373942_0000033 | |||
| 332 | Ga0373942_0000929 | |||
| 333 | Ga0373935_0004701 | |||
| 334 | Ga0373935_0250356 | |||
| 335 | Ga0373933_0187782 | |||
| 336 | Ga0373947_0017716 | |||
| 337 | Ga0373937_0462742 | |||
| 338 | Ga0373925_0055184 | |||
| 339 | Ga0395898_0012990 | |||
| 340 | Ga0395905_0062995 | |||
| 341 | Ga0436364_0248917 | |||
| 342 | Ga0436364_0398074 | |||
| 343 | Ga0395901_0027695 | |||
| 344 | Ga0451791_1294675 | |||
| 345 | Ga0451797_1254811 | |||
| 346 | Ga0451853_0374029 | |||
| 347 | Ga0439449_0016626 | |||
| 348 | Ga0466972_0007435 | |||
| 349 | Ga0466965_0002418 | |||
| 350 | Ga0466965_0002838 | |||
| 351 | Ga0466965_0049076 | |||
| 352 | Ga0466965_0092840 | |||
| 353 | Ga0466961_0086931 | |||
| 354 | Ga0466963_0277454 | |||
| 355 | Ga0466970_0023494 | |||
| 356 | Ga0466957_0029573 | |||
| 357 | Ga0466960_0049560 | |||
| 358 | Ga0466958_0176808 | |||
| 359 | Ga0495627_020467 | |||
| 360 | Ga0495629_0241565 | |||
| 361 | Ga0495641_0016973 | |||
| 362 | Ga0495641_0080444 | |||
| 363 | Ga0495582_0006059 | |||
| 364 | Ga0495639_0050219 | |||
| 365 | Ga0495662_0006576 | |||
| 366 | Ga0495652_0123601 | |||
| 367 | Ga0495665_0019646 | |||
| 368 | Ga0495640_0038929 | |||
| 369 | Ga0495587_0034729 | |||
| 370 | Ga0495645_0061696 | |||
| 371 | Ga0495634_0017237 | |||
| 372 | Ga0495646_0121116 | |||
| 373 | Ga0495613_0007628 | |||
| 374 | Ga0495624_0010514 | |||
| 375 | Ga0495581_0030949 | |||
| 376 | Ga0495604_0042364 | |||
| 377 | Ga0495674_0108626 | |||
| 378 | Ga0495674_0112587 | |||
| 379 | Ga0495680_0023500 | |||
| 380 | Ga0495675_0226773 | |||
| 381 | Ga0495614_0101149 | |||
| 382 | Ga0496104_0123105 | |||
| 383 | Ga0496105_0157155 | |||
| 384 | Ga0496108_0000149 | |||
| 385 | Ga0496109_0103140 | |||
| 386 | Ga0496114_0074885 | |||
| 387 | Ga0496114_0128098 | |||
| 388 | Ga0496117_0023817 | |||
| 389 | Ga0496119_0046486 | |||
| 390 | Ga0496120_0061349 | |||
| 391 | Ga0496122_0001262 | |||
| 392 | Ga0496122_0017612 | |||
| 393 | Ga0496123_0000275 | |||
| 394 | Ga0496124_0000370 | |||
| 395 | Ga0496125_0000015 | |||
| 396 | Ga0496125_0013536 | |||
| 397 | Ga0501034_0056934 | |||
| 398 | Ga0501034_0252028 | |||
| 399 | Ga0501046_0004091 | |||
| 400 | Ga0501047_0009853 | |||
| 401 | Ga0501047_0154623 | |||
| 402 | Ga0501068_0040554 | |||
| 403 | Ga0501079_0293653 | |||
| 404 | Ga0501035_0047426 | |||
| 405 | Ga0501044_0009395 | |||
| 406 | Ga0501045_0108565 | |||
| 407 | nmdc:mga03n38_146941_c1 | |||
| 408 | nmdc:mga00v17_39613_c1 | |||
| 409 | nmdc:mga0yw44_109868_c1 | |||
| 410 | nmdc:mga0yw44_12213_c1 | |||
| 411 | nmdc:mga0yw44_191834_c1 | |||
| 412 | nmdc:mga0yw44_996_c1 | |||
| 413 | nmdc:mga06z11_54538_c1 | |||
| 414 | nmdc:mga07m45_15000_c1 | |||
| 415 | Ga0495612_0006236 | |||
| 416 | Ga0495595_0020377 | |||
| 417 | Ga0495619_0028459 | |||
| 418 | Ga0500644_0006235 | |||
| 419 | Ga0500651_0056517 | |||
| 420 | Ga0500641_0038748 | |||
| 421 | Ga0500554_011398 | |||
| 422 | Ga0500556_0013622 | |||
| 423 | Ga0500569_031799 | |||
| 424 | Ga0500573_0087238 | |||
| 425 | Ga0500600_0037566 | |||
| 426 | Ga0501082_0104458 | |||
| 427 | Ga0501082_0263052 | |||
| 428 | 2835189938 | |||
| 429 | 2644082790 | |||
| 430 | 2644505119 | |||
| 431 | 2644527442 | |||
| 432 | 2644665745 | |||
| 433 | 2644667490 | |||
| 434 | 2738693168 | |||
| 435 | 2739323257 | |||
| 436 | 2739607866 | |||
| 437 | 2753073275 | |||
| 438 | 2753271479 | |||
| 439 | 2760304131 | |||
| 440 | 2760621920 | |||
| 441 | 2809026762 | |||
| 442 | 2812362279 | |||
| 443 | 2832007108 | |||
| 444 | 2839986979 | |||
| 445 | 2848551960 | |||
| 446 | 2858903122 | |||
| 447 | 2866066801 | |||
| 448 | 2870729090 | |||
| 449 | 2884994433 | |||
| 450 | 2887444492 | |||
| 451 | 2932433855 | |||
| 452 | 2935892546 | |||
| 453 | 8003862105 | |||
| 454 | 8003872282 | |||
| 455 | 8055415827 | |||
| 456 | 8056580857 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3tx8-assembly1.cif.gz_A-2 | crystal structure of a succinyl-diaminopimelate desuccinylase (arge) from corynebacterium glutamicum atcc 13032 at 2.97 a resolution | 0.9016 | 5 | 357 |
| 3tx8-assembly1.cif.gz_A-2 | crystal structure of a succinyl-diaminopimelate desuccinylase (arge) from corynebacterium glutamicum atcc 13032 at 2.97 a resolution | 0.8897 | 5 | 357 |
| 3ct9-assembly1.cif.gz_B | crystal structure of a putative zinc peptidase (np_812461.1) from bacteroides thetaiotaomicron vpi-5482 at 2.31 a resolution | 0.8513 | 10 | 355 |
| 4ppz-assembly1.cif.gz_A | crystal structure of zinc-bound succinyl-diaminopimelate desuccinylase from neisseria meningitidis mc58 | 0.849 | 10 | 355 |
| 1vgy-assembly1.cif.gz_B | crystal structure of succinyl diaminopimelate desuccinylase | 0.8472 | 10 | 355 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P9WHS9_166_276_3.40.630.10 | Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases | 0.9582 | 168 | 275 | 3.40.630.10 |
| af_P9WHS9_166_276_3.40.630.10 | Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases | 0.925 | 168 | 275 | 3.40.630.10 |
| 3tx8A01 | Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases | 0.9147 | 5 | 357 | 3.40.630.10 |
| 3tx8A01 | Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases | 0.911 | 5 | 357 | 3.40.630.10 |
| 5xoyB01 | Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases | 0.8649 | 8 | 355 | 3.40.630.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A6G9ZAZ3-F1-model_v4 | Succinyl-diaminopimelate desuccinylase (EC 3.5.1.18) | 0.9771 | 2 | 356 |
GO:0006526
GO:0008777 GO:0009014 GO:0009089 GO:0046872 |
| AF-A0A353ZV57-F1-model_v4 | Succinyl-diaminopimelate desuccinylase | 0.9755 | 151 | 332 |
GO:0006526
GO:0008777 |
| AF-A0A370H8M9-F1-model_v4 | Succinyl-diaminopimelate desuccinylase (EC 3.5.1.18) | 0.9726 | 2 | 356 |
GO:0006526
GO:0008777 GO:0009014 GO:0009089 GO:0046872 |
| AF-A0A7G7MK06-F1-model_v4 | Succinyl-diaminopimelate desuccinylase (EC 3.5.1.18) | 0.9707 | 2 | 356 |
GO:0006526
GO:0008777 GO:0009014 GO:0009089 GO:0046872 |
| AF-A0A353ZV57-F1-model_v4 | Succinyl-diaminopimelate desuccinylase | 0.9701 | 151 | 332 |
GO:0006526
GO:0008777 |