F341465

General Info

Members Datasets Scaffolds Average Seq Length
228 179 456 272

Family's Representative Sequence

Representative Sequence 3300053127|Ga0500623_078354|Ga0500623_078354_187_1125
Length 312
Sequence MVISCQWGETCSMDMASSSGLGDARIGMPTPALPIGKTRRPVTQQARGVLHRVAEGAFTHERVAPSPGLADTVEHFWRVRWRLAGQPPQVQETLPHPNVHIVIEPGRMAAHGVHTGRWTTLLEGDSQAFGIKFRPGAFRGILQRPVSELADRQMPLAELFGDAARAPADVLGHEDMGDAVEAAERFLAPRVPRPDPQALLAAHIVDSIVDDRELVAAAELAERHGLTLRALQRLFAEYVGVGPKWVIQRYRLHEAVARVQAGEPVSWAALAQDLGYFDQAHFIADFRKLVGRTPADYATAVKVQCTTTRQES

Samples

Sample ID Description Type Environment
1 3300053127 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 endosphere Metagenome Endosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
28 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
34 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
39 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
40 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
41 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
45 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
46 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
47 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
48 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
49 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
50 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
51 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
52 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
55 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
56 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
59 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
60 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
61 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
62 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
63 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
64 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
65 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
66 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
67 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
68 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
69 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
70 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
71 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
73 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
74 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
76 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
77 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
109 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
110 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
111 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
112 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
113 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
114 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
115 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
116 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
117 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
118 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
119 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
120 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
121 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
122 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
123 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
124 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
125 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
126 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
127 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
128 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
129 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
130 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
131 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
132 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
133 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
134 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
135 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
136 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
137 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
138 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
139 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
140 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
141 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
142 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
143 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
144 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
145 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
146 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
147 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
148 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
160 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
161 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
163 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
164 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
165 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
166 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
167 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
168 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
169 2585428057 Methylibium sp. YR605 Isolate Rhizosphere
170 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
171 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
172 2643221592 Rhizobacter sp. Root16D2 Isolate Unclassified
173 2643221625 Rhizobacter sp. Root29 Isolate Unclassified
174 2643221648 Rhizobacter sp. Root1238 Isolate Unclassified
175 2808606418 Herbaspirillum sp. SJZ107 Isolate Rhizosphere
176 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
177 2881644220 Siminovitchia terrae LMG 29736 Isolate Rhizosphere
178 2925326138 Paenibacillus hemerocallicola KCTC 33185 Isolate Unclassified
179 3006978542 Bacillus sp. FJAT-49705 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.18
Metatranscriptomes 0
Isolates 4.82

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.7
Nodule 0
Rhizoplane 3.95
Rhizosphere 82.89
Stem 0
Stem Tuber 0
Unclassified 21.05

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500623_078354 3300053127 Bacteria 1579
2 rootH1_10016489 3300003323 Bacteria 2993
3 Ga0055529_1000901 3300003763 Bacteria 16570
4 Ga0065707_10096180 3300005295 Bacteria 3296
5 Ga0070658_10406476 3300005327 Bacteria 1170
6 Ga0070676_10000867 3300005328 Bacteria 14918
7 Ga0070676_10165558 3300005328 Unclassified 1426
8 Ga0068869_100006511 3300005334 Bacteria 7415
9 Ga0070666_10404710 3300005335 Bacteria 981
10 Ga0070680_100188030 3300005336 Unclassified 1740
11 Ga0070691_10057672 3300005341 Unclassified 1863
12 Ga0070692_10098040 3300005345 Unclassified 1603
13 Ga0070668_100007469 3300005347 Bacteria 8111
14 Ga0070668_100027580 3300005347 Unclassified 4312
15 Ga0070668_100329930 3300005347 Bacteria 1286
16 Ga0070669_100171115 3300005353 Unclassified 1693
17 Ga0070674_100004325 3300005356 Bacteria 8091
18 Ga0070674_100046134 3300005356 Unclassified 2980
19 Ga0070674_100127155 3300005356 Bacteria 1895
20 Ga0070673_100091266 3300005364 Bacteria 2490
21 Ga0070673_100094325 3300005364 Bacteria 2453
22 Ga0070659_100383991 3300005366 Bacteria 1183
23 Ga0070667_100059410 3300005367 Bacteria 3234
24 Ga0070667_100180481 3300005367 Bacteria 1867
25 Ga0070667_100278275 3300005367 Unclassified 1502
26 Ga0070705_100001190 3300005440 Bacteria 14165
27 Ga0070700_100101312 3300005441 Unclassified 1898
28 Ga0070700_100178472 3300005441 Unclassified 1476
29 Ga0070694_100001676 3300005444 Bacteria 13028
30 Ga0070678_100142925 3300005456 Unclassified 1917
31 Ga0070662_100000539 3300005457 Bacteria 22955
32 Ga0068867_100000171 3300005459 Bacteria 42278
33 Ga0068867_100199743 3300005459 Unclassified 1600
34 Ga0070685_10018225 3300005466 Bacteria 3772
35 Ga0068853_100130663 3300005539 Unclassified 2248
36 Ga0070672_100115911 3300005543 Unclassified 2188
37 Ga0070686_100119028 3300005544 Unclassified 1811
38 Ga0070696_100048232 3300005546 Unclassified 2956
39 Ga0070696_100270553 3300005546 Unclassified 1292
40 Ga0070665_100284824 3300005548 Bacteria 1654
41 Ga0070665_100463813 3300005548 Bacteria 1277
42 Ga0070704_100007015 3300005549 Bacteria 6684
43 Ga0068855_100160602 3300005563 Unclassified 2551
44 Ga0068857_100002276 3300005577 Bacteria 15607
45 Ga0068854_100000595 3300005578 Bacteria 21478
46 Ga0068856_100007553 3300005614 Bacteria 10608
47 Ga0068852_100441536 3300005616 Unclassified 1287
48 Ga0068859_100000659 3300005617 Bacteria 34594
49 Ga0068864_100028601 3300005618 Unclassified 4714
50 Ga0068866_10000545 3300005718 Bacteria 17210
51 Ga0068861_100134575 3300005719 Unclassified 2010
52 Ga0068851_10086300 3300005834 Bacteria 1646
53 Ga0068870_10026053 3300005840 Bacteria 2910
54 Ga0068863_100015016 3300005841 Bacteria 7439
55 Ga0068863_100048523 3300005841 Bacteria 4026
56 Ga0068858_100127914 3300005842 Bacteria 2380
57 Ga0068860_100008458 3300005843 Bacteria 10252
58 Ga0068860_100027490 3300005843 Bacteria 5478
59 Ga0068860_100070642 3300005843 Bacteria 3319
60 Ga0068860_100087540 3300005843 Bacteria 2965
61 Ga0068860_100113239 3300005843 Bacteria 2594
62 Ga0068862_100235091 3300005844 Unclassified 1664
63 Ga0081455_10002254 3300005937 Bacteria 22968
64 Ga0081540_1012557 3300005983 Bacteria 5565
65 Ga0075370_10006870 3300006353 Bacteria 5757
66 Ga0068871_100100209 3300006358 Unclassified 2426
67 Ga0068871_100116797 3300006358 Bacteria 2250
68 Ga0075431_100003400 3300006847 Bacteria 15428
69 Ga0075431_100109433 3300006847 Bacteria 2852
70 Ga0075431_100565219 3300006847 Unclassified 1124
71 Ga0068865_100002633 3300006881 Bacteria 10663
72 Ga0097620_100000659 3300006931 Bacteria 34594
73 Ga0105240_10400732 3300009093 Bacteria 1545
74 Ga0105243_10004241 3300009148 Bacteria 11359
75 Ga0105241_10038974 3300009174 Unclassified 3583
76 Ga0105242_10002389 3300009176 Bacteria 14784
77 Ga0105248_10001202 3300009177 Bacteria 28938
78 Ga0105248_10278635 3300009177 Unclassified 1883
79 Ga0105237_10061882 3300009545 Bacteria 3741
80 Ga0105239_10001695 3300010375 Bacteria 29048
81 Ga0157369_10012367 3300013105 Bacteria 9689
82 Ga0157374_10131176 3300013296 Bacteria 2425
83 Ga0163162_10000313 3300013306 Bacteria 44855
84 Ga0163162_10009236 3300013306 Bacteria 9593
85 Ga0157372_10120390 3300013307 Unclassified 3014
86 Ga0157375_10049216 3300013308 Bacteria 4128
87 Ga0157375_10286064 3300013308 Bacteria 1812
88 Ga0163163_10038647 3300014325 Bacteria 4652
89 Ga0157380_10153354 3300014326 Bacteria 1994
90 Ga0157380_10232882 3300014326 Unclassified 1655
91 Ga0157380_10340428 3300014326 Bacteria 1399
92 Ga0157379_10010205 3300014968 Bacteria 8183
93 Ga0157376_10029796 3300014969 Bacteria 4351
94 Ga0163161_10560566 3300017792 Unclassified 937
95 Ga0213876_10017688 3300021384 Bacteria 3761
96 Ga0209258_100025 3300025242 Bacteria 534777
97 Ga0209026_1001952 3300025250 Bacteria 8309
98 Ga0209759_1001089 3300025256 Bacteria 17670
99 Ga0209455_1000089 3300025272 Bacteria 235612
100 Ga0209025_1004409 3300025294 Bacteria 12245
101 Ga0209758_1006532 3300025297 Bacteria 8320
102 Ga0209051_1001015 3300025303 Bacteria 26903
103 Ga0207656_10059967 3300025321 Bacteria 1667
104 Ga0207645_10003394 3300025907 Bacteria 12109
105 Ga0207643_10016744 3300025908 Bacteria 4000
106 Ga0207705_10087053 3300025909 Bacteria 2284
107 Ga0207705_10127500 3300025909 Bacteria 1892
108 Ga0207654_10034603 3300025911 Unclassified 2808
109 Ga0207660_10148394 3300025917 Unclassified 1800
110 Ga0207681_10014259 3300025923 Unclassified 4934
111 Ga0207681_10253695 3300025923 Unclassified 1374
112 Ga0207706_10000168 3300025933 Bacteria 72574
113 Ga0207686_10000196 3300025934 Bacteria 46701
114 Ga0207686_10012814 3300025934 Bacteria 4620
115 Ga0207709_10004225 3300025935 Bacteria 8327
116 Ga0207669_10000747 3300025937 Bacteria 14066
117 Ga0207669_10190901 3300025937 Bacteria 1478
118 Ga0207704_10003670 3300025938 Bacteria 6978
119 Ga0207704_10323593 3300025938 Unclassified 1190
120 Ga0207691_10032365 3300025940 Bacteria 4876
121 Ga0207691_10045561 3300025940 Bacteria 4030
122 Ga0207691_10183362 3300025940 Unclassified 1828
123 Ga0207711_10003756 3300025941 Bacteria 13079
124 Ga0207711_10143019 3300025941 Bacteria 2153
125 Ga0207711_10346365 3300025941 Bacteria 1375
126 Ga0207689_10000439 3300025942 Bacteria 38980
127 Ga0207667_10129333 3300025949 Unclassified 2601
128 Ga0207651_10170413 3300025960 Bacteria 1716
129 Ga0207712_10024608 3300025961 Unclassified 3990
130 Ga0207668_10015629 3300025972 Unclassified 4719
131 Ga0207668_10307581 3300025972 Bacteria 1310
132 Ga0207640_10003635 3300025981 Bacteria 8319
133 Ga0207658_10124179 3300025986 Bacteria 2063
134 Ga0207658_10315390 3300025986 Bacteria 1352
135 Ga0207658_10473403 3300025986 Unclassified 1112
136 Ga0207703_10007559 3300026035 Bacteria 8617
137 Ga0207703_10053339 3300026035 Bacteria 3286
138 Ga0207708_10041276 3300026075 Unclassified 3517
139 Ga0207702_10000138 3300026078 Bacteria 87882
140 Ga0207641_10051802 3300026088 Bacteria 3476
141 Ga0207648_10000028 3300026089 Bacteria 130116
142 Ga0207674_10008318 3300026116 Bacteria 12005
143 Ga0207675_100195089 3300026118 Unclassified 1943
144 Ga0207683_10191350 3300026121 Unclassified 1858
145 Ga0207683_10327986 3300026121 Bacteria 1403
146 Ga0268264_10002528 3300028381 Bacteria 16073
147 Ga0268264_10092277 3300028381 Unclassified 2613
148 Ga0307517_10166295 3300028786 Bacteria 1464
149 Ga0307513_10000742 3300031456 Bacteria 46923
150 Ga0307513_10195270 3300031456 Bacteria 1871
151 Ga0307516_10000268 3300031730 Bacteria 66758
152 Ga0307516_10001755 3300031730 Bacteria 29838
153 Ga0307413_10374073 3300031824 Bacteria 1108
154 Ga0373937_0585855 3300036401 Bacteria 1059
155 Ga0395898_0184774 3300037466 Bacteria 1992
156 Ga0436365_0292139 3300039437 Bacteria 4676
157 Ga0451797_0453121 3300041453 Bacteria 1181
158 Ga0451807_2509828 3300041486 Bacteria 2044
159 Ga0451837_1289056 3300041494 Bacteria 3301
160 Ga0466969_0000031 3300044656 Bacteria 86708
161 Ga0466969_0056968 3300044656 Bacteria 1906
162 Ga0466966_0057288 3300044684 Bacteria 2463
163 Ga0466966_0067902 3300044684 Bacteria 2238
164 Ga0466961_0024419 3300044693 Bacteria 3889
165 Ga0466961_0068760 3300044693 Bacteria 2248
166 Ga0466963_0075509 3300044694 Bacteria 2274
167 Ga0466971_0013531 3300044719 Bacteria 3584
168 Ga0466957_0039799 3300044842 Bacteria 2837
169 Ga0466960_0095063 3300044901 Bacteria 1526
170 Ga0466959_0000915 3300045049 Bacteria 17462
171 Ga0466959_0051109 3300045049 Bacteria 3033
172 Ga0451576_0065576 3300045051 Bacteria 3780
173 Ga0466967_0235554 3300045976 Bacteria 1744
174 Ga0495603_0061843 3300046455 Unclassified 2211
175 Ga0495629_0156297 3300046459 Bacteria 1584
176 Ga0495651_0087557 3300046462 Bacteria 2342
177 Ga0495582_0132621 3300046473 Bacteria 1408
178 Ga0495662_0112470 3300046476 Bacteria 1334
179 Ga0495662_0185524 3300046476 Bacteria 1025
180 Ga0495616_0000037 3300046513 Bacteria 123624
181 Ga0495631_0001881 3300046518 Bacteria 12384
182 Ga0495632_0129032 3300046519 Bacteria 1177
183 Ga0495659_0046914 3300046664 Unclassified 1561
184 Ga0495613_0140842 3300046689 Bacteria 1723
185 Ga0495636_0031245 3300047318 Unclassified 2182
186 Ga0495672_0036698 3300047320 Bacteria 3007
187 Ga0496101_0068920 3300048904 Unclassified 2587
188 Ga0496102_0228350 3300048905 Unclassified 1755
189 Ga0496104_0432380 3300048907 Bacteria 1228
190 Ga0496106_0013633 3300048909 Bacteria 6001
191 Ga0496107_0456489 3300048910 Bacteria 949
192 Ga0496108_0139808 3300048911 Bacteria 2086
193 Ga0496111_0445114 3300048914 Bacteria 956
194 Ga0496118_0005036 3300048921 Bacteria 15243
195 Ga0501031_0069763 3300049568 Bacteria 2289
196 Ga0501032_0128807 3300049569 Bacteria 1670
197 Ga0501034_0090218 3300049571 Bacteria 3063
198 Ga0501036_0163659 3300049572 Bacteria 1875
199 Ga0501037_0049422 3300049573 Bacteria 3079
200 Ga0501038_0058995 3300049574 Bacteria 3288
201 Ga0501040_0110428 3300049576 Bacteria 1923
202 Ga0501043_0228298 3300049579 Bacteria 1438
203 Ga0501046_0189748 3300049580 Bacteria 1533
204 Ga0501047_0175463 3300049581 Bacteria 2010
205 Ga0501048_0044029 3300049582 Bacteria 3193
206 Ga0501080_0093566 3300049742 Bacteria 2791
207 Ga0501083_0019911 3300049744 Bacteria 4669
208 Ga0501035_0406371 3300049822 Bacteria 1132
209 Ga0501044_0089271 3300049823 Bacteria 3111
210 Ga0501044_0384594 3300049823 Bacteria 1318
211 nmdc:mga07m45_8826_c1 3300050496 Bacteria 4290
212 nmdc:mga06r32_7001_c1 3300050510 Bacteria 10148
213 Ga0500592_003297 3300053116 Bacteria 2573
214 Ga0500564_121424 3300053138 Bacteria 1138
215 Ga0500622_0000094 3300053156 Bacteria 91975
216 Ga0500622_0060485 3300053156 Bacteria 1932
217 Ga0466962_0037754 3300061719 Bacteria 2313
218 2587728370 2585428057 Bacteria 6737412
219 2587735501 2585428058 Bacteria 6853932
220 2588294110 2588253510 Bacteria 6901809
221 2643970304 2643221592 Bacteria 6608788
222 2644139606 2643221625 Bacteria 6512927
223 2644272419 2643221648 Bacteria 6521465
224 2809147274 2808606418 Bacteria 6724496
225 2862511373 2862507626 Bacteria 9425308
226 2881647275 2881644220 Bacteria 5302661
227 2925328042 2925326138 Bacteria 9652120
228 3006982911 3006978542 Bacteria 5328100
229 Ga0500623_078354
230 rootH1_10016489
231 Ga0055529_1000901
232 Ga0065707_10096180
233 Ga0070658_10406476
234 Ga0070676_10000867
235 Ga0070676_10165558
236 Ga0068869_100006511
237 Ga0070666_10404710
238 Ga0070680_100188030
239 Ga0070691_10057672
240 Ga0070692_10098040
241 Ga0070668_100007469
242 Ga0070668_100027580
243 Ga0070668_100329930
244 Ga0070669_100171115
245 Ga0070674_100004325
246 Ga0070674_100046134
247 Ga0070674_100127155
248 Ga0070673_100091266
249 Ga0070673_100094325
250 Ga0070659_100383991
251 Ga0070667_100059410
252 Ga0070667_100180481
253 Ga0070667_100278275
254 Ga0070705_100001190
255 Ga0070700_100101312
256 Ga0070700_100178472
257 Ga0070694_100001676
258 Ga0070678_100142925
259 Ga0070662_100000539
260 Ga0068867_100000171
261 Ga0068867_100199743
262 Ga0070685_10018225
263 Ga0068853_100130663
264 Ga0070672_100115911
265 Ga0070686_100119028
266 Ga0070696_100048232
267 Ga0070696_100270553
268 Ga0070665_100284824
269 Ga0070665_100463813
270 Ga0070704_100007015
271 Ga0068855_100160602
272 Ga0068857_100002276
273 Ga0068854_100000595
274 Ga0068856_100007553
275 Ga0068852_100441536
276 Ga0068859_100000659
277 Ga0068864_100028601
278 Ga0068866_10000545
279 Ga0068861_100134575
280 Ga0068851_10086300
281 Ga0068870_10026053
282 Ga0068863_100015016
283 Ga0068863_100048523
284 Ga0068858_100127914
285 Ga0068860_100008458
286 Ga0068860_100027490
287 Ga0068860_100070642
288 Ga0068860_100087540
289 Ga0068860_100113239
290 Ga0068862_100235091
291 Ga0081455_10002254
292 Ga0081540_1012557
293 Ga0075370_10006870
294 Ga0068871_100100209
295 Ga0068871_100116797
296 Ga0075431_100003400
297 Ga0075431_100109433
298 Ga0075431_100565219
299 Ga0068865_100002633
300 Ga0097620_100000659
301 Ga0105240_10400732
302 Ga0105243_10004241
303 Ga0105241_10038974
304 Ga0105242_10002389
305 Ga0105248_10001202
306 Ga0105248_10278635
307 Ga0105237_10061882
308 Ga0105239_10001695
309 Ga0157369_10012367
310 Ga0157374_10131176
311 Ga0163162_10000313
312 Ga0163162_10009236
313 Ga0157372_10120390
314 Ga0157375_10049216
315 Ga0157375_10286064
316 Ga0163163_10038647
317 Ga0157380_10153354
318 Ga0157380_10232882
319 Ga0157380_10340428
320 Ga0157379_10010205
321 Ga0157376_10029796
322 Ga0163161_10560566
323 Ga0213876_10017688
324 Ga0209258_100025
325 Ga0209026_1001952
326 Ga0209759_1001089
327 Ga0209455_1000089
328 Ga0209025_1004409
329 Ga0209758_1006532
330 Ga0209051_1001015
331 Ga0207656_10059967
332 Ga0207645_10003394
333 Ga0207643_10016744
334 Ga0207705_10087053
335 Ga0207705_10127500
336 Ga0207654_10034603
337 Ga0207660_10148394
338 Ga0207681_10014259
339 Ga0207681_10253695
340 Ga0207706_10000168
341 Ga0207686_10000196
342 Ga0207686_10012814
343 Ga0207709_10004225
344 Ga0207669_10000747
345 Ga0207669_10190901
346 Ga0207704_10003670
347 Ga0207704_10323593
348 Ga0207691_10032365
349 Ga0207691_10045561
350 Ga0207691_10183362
351 Ga0207711_10003756
352 Ga0207711_10143019
353 Ga0207711_10346365
354 Ga0207689_10000439
355 Ga0207667_10129333
356 Ga0207651_10170413
357 Ga0207712_10024608
358 Ga0207668_10015629
359 Ga0207668_10307581
360 Ga0207640_10003635
361 Ga0207658_10124179
362 Ga0207658_10315390
363 Ga0207658_10473403
364 Ga0207703_10007559
365 Ga0207703_10053339
366 Ga0207708_10041276
367 Ga0207702_10000138
368 Ga0207641_10051802
369 Ga0207648_10000028
370 Ga0207674_10008318
371 Ga0207675_100195089
372 Ga0207683_10191350
373 Ga0207683_10327986
374 Ga0268264_10002528
375 Ga0268264_10092277
376 Ga0307517_10166295
377 Ga0307513_10000742
378 Ga0307513_10195270
379 Ga0307516_10000268
380 Ga0307516_10001755
381 Ga0307413_10374073
382 Ga0373937_0585855
383 Ga0395898_0184774
384 Ga0436365_0292139
385 Ga0451797_0453121
386 Ga0451807_2509828
387 Ga0451837_1289056
388 Ga0466969_0000031
389 Ga0466969_0056968
390 Ga0466966_0057288
391 Ga0466966_0067902
392 Ga0466961_0024419
393 Ga0466961_0068760
394 Ga0466963_0075509
395 Ga0466971_0013531
396 Ga0466957_0039799
397 Ga0466960_0095063
398 Ga0466959_0000915
399 Ga0466959_0051109
400 Ga0451576_0065576
401 Ga0466967_0235554
402 Ga0495603_0061843
403 Ga0495629_0156297
404 Ga0495651_0087557
405 Ga0495582_0132621
406 Ga0495662_0112470
407 Ga0495662_0185524
408 Ga0495616_0000037
409 Ga0495631_0001881
410 Ga0495632_0129032
411 Ga0495659_0046914
412 Ga0495613_0140842
413 Ga0495636_0031245
414 Ga0495672_0036698
415 Ga0496101_0068920
416 Ga0496102_0228350
417 Ga0496104_0432380
418 Ga0496106_0013633
419 Ga0496107_0456489
420 Ga0496108_0139808
421 Ga0496111_0445114
422 Ga0496118_0005036
423 Ga0501031_0069763
424 Ga0501032_0128807
425 Ga0501034_0090218
426 Ga0501036_0163659
427 Ga0501037_0049422
428 Ga0501038_0058995
429 Ga0501040_0110428
430 Ga0501043_0228298
431 Ga0501046_0189748
432 Ga0501047_0175463
433 Ga0501048_0044029
434 Ga0501080_0093566
435 Ga0501083_0019911
436 Ga0501035_0406371
437 Ga0501044_0089271
438 Ga0501044_0384594
439 nmdc:mga07m45_8826_c1
440 nmdc:mga06r32_7001_c1
441 Ga0500592_003297
442 Ga0500564_121424
443 Ga0500622_0000094
444 Ga0500622_0060485
445 Ga0466962_0037754
446 2587728370
447 2587735501
448 2588294110
449 2643970304
450 2644139606
451 2644272419
452 2809147274
453 2862511373
454 2881647275
455 2925328042
456 3006982911

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF20240

DUF6597

Domain of unknown function (DUF6597)

61

155

0.97

PF12833

HTH_18

Helix-turn-helix domain

220

300

0.94

PF00165

HTH_AraC

Bacterial regulatory helix-turn-helix proteins, AraC family

260

299

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
1bl0-assembly1.cif.gz_A multiple antibiotic resistance protein (mara)/dna complex 0.8743 172 267
7w5w-assembly1.cif.gz_J cryo-em structure of soxs-dependent transcription activation complex with micf promoter dna 0.8697 163 266
3lsg-assembly1.cif.gz_A the crystal structure of the c-terminal domain of the two-component response regulator yesn from fusobacterium nucleatum subsp. nucleatum atcc 25586 0.8564 173 267
3lsg-assembly2.cif.gz_D the crystal structure of the c-terminal domain of the two-component response regulator yesn from fusobacterium nucleatum subsp. nucleatum atcc 25586 0.8476 173 257
1xs9-assembly1.cif.gz_A a model of the ternary complex formed between mara, the alpha-ctd of rna polymerase and dna 0.8421 160 272
ID Description Score Start End Superfamily
1d5yD02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.943 220 268 1.10.10.60
af_P32677_219_275_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9208 220 271 1.10.10.60
af_P06134_78_136_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9002 217 270 1.10.10.60
af_P9WJW3_81_188_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.8897 171 272 1.10.10.60
af_O69703_224_336_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.8874 173 270 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A2M9YPZ4-F1-model_v4 HTH araC/xylS-type domain-containing protein 0.9632 14 268 GO:0003700
GO:0043565
AF-A0A329QNC2-F1-model_v4 AraC family transcriptional regulator 0.9559 26 271 GO:0003700
GO:0043565
AF-A0A7X3GEW7-F1-model_v4 Helix-turn-helix domain-containing protein 0.9557 26 271 GO:0003700
GO:0043565
AF-A0A0P9HAT8-F1-model_v4 HTH araC/xylS-type domain-containing protein 0.9515 13 271 GO:0003700
GO:0043565
AF-A0A2S6GVC1-F1-model_v4 AraC-like DNA-binding protein 0.9509 26 268 GO:0003700
GO:0043565

Map