F341261
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 228 | 154 | 456 | 402 |
Family's Representative Sequence
| Representative Sequence | 3300044842|Ga0466957_0006278|Ga0466957_0006278_387_1700 |
| Length | 437 |
| Sequence | MPMSDDADDRARPSNLPIIEPSVDRTGENTRAVHVPTPDLSAVRPMGLPTYRTSAYRFASARDYADILGDRVSGYSYSRIDNPTADAFALGVAALEGHGLDRPVAAQPFGSGMAAVSTVLLALTGAGGHVVAPAAVYGGTYGLIEHILRRFGVDATYVDMADADSVRAAIRDDTVLVWAETIANPTTSVADLPAVAAACREAGAATGRRIPLCVDSTFAPPPVCRPLGWGADLVMHSATKYLGGHSDVTGGVVVGDVDLLARVRLARVDLGGSLAPDEAFLLQRGLATLPLRVARHCATAMRVAEAIADHPAVERVDYPGLPNHPQHALAGKLFESGPEGVRYGGIVTVTPAGGREVGFALADALQIGQVATSLGGTHTVVSHVASTTHRQLDDAALAAAGIGPAAVRISVGLEDADDLIADLRRALDALPARRERG |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 2 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 3 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 4 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 5 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 6 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 7 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 9 | 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Metagenome | Rhizosphere |
| 10 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 13 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 15 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 16 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 19 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 20 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 21 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 22 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 23 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 24 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 25 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 27 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 28 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 29 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 30 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 31 | 3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Metagenome | Rhizosphere |
| 32 | 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Metagenome | Rhizosphere |
| 33 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 34 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 35 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 43 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 44 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 45 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 48 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 49 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 50 | 3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 51 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025905 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 79 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 80 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 81 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 82 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 83 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 84 | 3300035086 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 | Metagenome | Rhizosphere |
| 85 | 3300035113 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 86 | 3300035116 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 | Metagenome | Rhizosphere |
| 87 | 3300035170 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 | Metagenome | Rhizosphere |
| 88 | 3300035171 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 | Metagenome | Rhizosphere |
| 89 | 3300035410 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 90 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 91 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 92 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 93 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 94 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 95 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 96 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 97 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 98 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 99 | 3300039453 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 | Metagenome | Rhizosphere |
| 100 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 101 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 102 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 103 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 104 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 105 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 106 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 107 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 108 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 109 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 110 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046475 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 131 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 132 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 133 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 134 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 135 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 136 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 137 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 138 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 139 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 140 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 141 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 142 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 143 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 144 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 145 | 3300053100 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 endosphere | Metagenome | Endosphere |
| 146 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 147 | 2508501039 | Frankia saprophytica CN3 | Isolate | Nodule |
| 148 | 2558860280 | Kutzneria sp. 744 | Isolate | Unclassified |
| 149 | 2675902999 | Frankia asymbiotica NRRL B-16386 | Isolate | Nodule |
| 150 | 2687453737 | Frankia sp. BMG5.36 | Isolate | Nodule |
| 151 | 2751185734 | Saccharothrix sp. NRRL B-16314 | Isolate | Rhizosphere |
| 152 | 2773857921 | Frankia asymbiotica NRRL B-16386 | Isolate | Nodule |
| 153 | 2870721527 | Saccharothrix ecbatanensis DSM 45486 | Isolate | Rhizosphere |
| 154 | 8047710418 | Umezawaea endophytica DSM 103496 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 95.18 |
| Metatranscriptomes | 1.32 |
| Isolates | 3.51 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0.44 |
| Nodule | 1.75 |
| Rhizoplane | 0.88 |
| Rhizosphere | 89.47 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0.44 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0466957_0006278 | 3300044842 | Bacteria | 6705 |
| 2 | Ga0070658_10000309 | 3300005327 | Bacteria | 42138 |
| 3 | Ga0070658_10000672 | 3300005327 | Bacteria | 29591 |
| 4 | Ga0070683_100006013 | 3300005329 | Bacteria | 10169 |
| 5 | Ga0070683_100087893 | 3300005329 | Bacteria | 2915 |
| 6 | Ga0068869_100047417 | 3300005334 | Bacteria | 3103 |
| 7 | Ga0070680_100000056 | 3300005336 | Bacteria | 57426 |
| 8 | Ga0070680_100016796 | 3300005336 | Bacteria | 5759 |
| 9 | Ga0070680_100027019 | 3300005336 | Bacteria | 4595 |
| 10 | Ga0070682_100000024 | 3300005337 | Bacteria | 199229 |
| 11 | Ga0070660_100031566 | 3300005339 | Bacteria | 3980 |
| 12 | Ga0070660_100229980 | 3300005339 | Bacteria | 1509 |
| 13 | Ga0070689_100006785 | 3300005340 | Bacteria | 7964 |
| 14 | Ga0070692_10061474 | 3300005345 | Bacteria | 1980 |
| 15 | Ga0070669_100029755 | 3300005353 | Bacteria | 3940 |
| 16 | Ga0070659_100008607 | 3300005366 | Bacteria | 7463 |
| 17 | Ga0070659_100012856 | 3300005366 | Bacteria | 6220 |
| 18 | Ga0070709_10000353 | 3300005434 | Bacteria | 28428 |
| 19 | Ga0070714_100000271 | 3300005435 | Bacteria | 39474 |
| 20 | Ga0070714_100001137 | 3300005435 | Bacteria | 19098 |
| 21 | Ga0070713_100008205 | 3300005436 | Bacteria | 7399 |
| 22 | Ga0070710_10000075 | 3300005437 | Bacteria | 44924 |
| 23 | Ga0070711_100003926 | 3300005439 | Bacteria | 8740 |
| 24 | Ga0070708_100000196 | 3300005445 | Bacteria | 44168 |
| 25 | Ga0070708_100018745 | 3300005445 | Bacteria | 5794 |
| 26 | Ga0070681_10000046 | 3300005458 | Bacteria | 84043 |
| 27 | Ga0070681_10000262 | 3300005458 | Bacteria | 42009 |
| 28 | Ga0070681_10006849 | 3300005458 | Bacteria | 11089 |
| 29 | Ga0070681_10070668 | 3300005458 | Bacteria | 3456 |
| 30 | Ga0070681_10313851 | 3300005458 | Bacteria | 1477 |
| 31 | Ga0070706_100389100 | 3300005467 | Bacteria | 1298 |
| 32 | Ga0070698_100210507 | 3300005471 | Bacteria | 1879 |
| 33 | Ga0070679_100001397 | 3300005530 | Bacteria | 21275 |
| 34 | Ga0070679_100001623 | 3300005530 | Bacteria | 20251 |
| 35 | Ga0070679_100007978 | 3300005530 | Bacteria | 9936 |
| 36 | Ga0070679_100025362 | 3300005530 | Bacteria | 5817 |
| 37 | Ga0070679_100094231 | 3300005530 | Bacteria | 2981 |
| 38 | Ga0070684_100003597 | 3300005535 | Bacteria | 11666 |
| 39 | Ga0070684_100016311 | 3300005535 | Bacteria | 6069 |
| 40 | Ga0070684_100132526 | 3300005535 | Bacteria | 2248 |
| 41 | Ga0070697_100070046 | 3300005536 | Bacteria | 2874 |
| 42 | Ga0068853_100015911 | 3300005539 | Bacteria | 6181 |
| 43 | Ga0070672_100000366 | 3300005543 | Bacteria | 26021 |
| 44 | Ga0068855_100161549 | 3300005563 | Bacteria | 2542 |
| 45 | Ga0068859_100028364 | 3300005617 | Bacteria | 5612 |
| 46 | Ga0068858_100000245 | 3300005842 | Bacteria | 58452 |
| 47 | Ga0068862_100315005 | 3300005844 | Unclassified | 1443 |
| 48 | Ga0070717_10006650 | 3300006028 | Bacteria | 8523 |
| 49 | Ga0070715_10000418 | 3300006163 | Bacteria | 10839 |
| 50 | Ga0070716_100000200 | 3300006173 | Bacteria | 23611 |
| 51 | Ga0070716_100017144 | 3300006173 | Bacteria | 3750 |
| 52 | Ga0070712_100004532 | 3300006175 | Bacteria | 8577 |
| 53 | Ga0075428_100261667 | 3300006844 | Bacteria | 1862 |
| 54 | Ga0097620_100028362 | 3300006931 | Bacteria | 5612 |
| 55 | Ga0111539_10184410 | 3300009094 | Bacteria | 2437 |
| 56 | Ga0105245_10008869 | 3300009098 | Bacteria | 8774 |
| 57 | Ga0114129_10154558 | 3300009147 | Bacteria | 3138 |
| 58 | Ga0114129_10328741 | 3300009147 | Bacteria | 2030 |
| 59 | Ga0105242_10095390 | 3300009176 | Bacteria | 2511 |
| 60 | Ga0105237_10000028 | 3300009545 | Bacteria | 201366 |
| 61 | Ga0105249_10278854 | 3300009553 | Bacteria | 1668 |
| 62 | Ga0157371_10017120 | 3300013102 | Bacteria | 5392 |
| 63 | Ga0157370_10098083 | 3300013104 | Bacteria | 2749 |
| 64 | Ga0157369_10000870 | 3300013105 | Bacteria | 38542 |
| 65 | Ga0157369_10004929 | 3300013105 | Bacteria | 15633 |
| 66 | Ga0157369_10138067 | 3300013105 | Bacteria | 2580 |
| 67 | Ga0157372_10632328 | 3300013307 | Bacteria | 1247 |
| 68 | Ga0157375_10000002 | 3300013308 | Bacteria | 495826 |
| 69 | Ga0206353_10083345 | 3300020082 | Bacteria | 2991 |
| 70 | Ga0206353_11550826 | 3300020082 | Bacteria | 36029 |
| 71 | Ga0213876_10000356 | 3300021384 | Bacteria | 39321 |
| 72 | Ga0213875_10000895 | 3300021388 | Bacteria | 21730 |
| 73 | Ga0213875_10011493 | 3300021388 | Bacteria | 4403 |
| 74 | Ga0224712_10049415 | 3300022467 | Bacteria | 1629 |
| 75 | Ga0207692_10000170 | 3300025898 | Bacteria | 20665 |
| 76 | Ga0207692_10020687 | 3300025898 | Bacteria | 2998 |
| 77 | Ga0207685_10014723 | 3300025905 | Bacteria | 2456 |
| 78 | Ga0207699_10000107 | 3300025906 | Bacteria | 58818 |
| 79 | Ga0207705_10000928 | 3300025909 | Bacteria | 23923 |
| 80 | Ga0207705_10002593 | 3300025909 | Bacteria | 13883 |
| 81 | Ga0207705_10150376 | 3300025909 | Bacteria | 1744 |
| 82 | Ga0207684_10050104 | 3300025910 | Bacteria | 3543 |
| 83 | Ga0207707_10000393 | 3300025912 | Bacteria | 45647 |
| 84 | Ga0207707_10000737 | 3300025912 | Bacteria | 32379 |
| 85 | Ga0207707_10276926 | 3300025912 | Bacteria | 1454 |
| 86 | Ga0207671_10003067 | 3300025914 | Bacteria | 17081 |
| 87 | Ga0207693_10003124 | 3300025915 | Bacteria | 14257 |
| 88 | Ga0207693_10018572 | 3300025915 | Bacteria | 5536 |
| 89 | Ga0207663_10000391 | 3300025916 | Bacteria | 19001 |
| 90 | Ga0207663_10133812 | 3300025916 | Bacteria | 1717 |
| 91 | Ga0207660_10001218 | 3300025917 | Bacteria | 17215 |
| 92 | Ga0207660_10003461 | 3300025917 | Bacteria | 10291 |
| 93 | Ga0207660_10011523 | 3300025917 | Bacteria | 5760 |
| 94 | Ga0207657_10024912 | 3300025919 | Bacteria | 5529 |
| 95 | Ga0207657_10067813 | 3300025919 | Bacteria | 3032 |
| 96 | Ga0207657_10133528 | 3300025919 | Bacteria | 2033 |
| 97 | Ga0207652_10000461 | 3300025921 | Bacteria | 41921 |
| 98 | Ga0207652_10000817 | 3300025921 | Bacteria | 29736 |
| 99 | Ga0207652_10014950 | 3300025921 | Bacteria | 6295 |
| 100 | Ga0207652_10073525 | 3300025921 | Bacteria | 2974 |
| 101 | Ga0207687_10002608 | 3300025927 | Bacteria | 12232 |
| 102 | Ga0207700_10000741 | 3300025928 | Bacteria | 18783 |
| 103 | Ga0207700_10022609 | 3300025928 | Bacteria | 4318 |
| 104 | Ga0207664_10000780 | 3300025929 | Bacteria | 21482 |
| 105 | Ga0207664_10001527 | 3300025929 | Bacteria | 15196 |
| 106 | Ga0207664_10005209 | 3300025929 | Bacteria | 8864 |
| 107 | Ga0207664_10053224 | 3300025929 | Bacteria | 3203 |
| 108 | Ga0207690_10002308 | 3300025932 | Bacteria | 11629 |
| 109 | Ga0207690_10034998 | 3300025932 | Bacteria | 3239 |
| 110 | Ga0207670_10002168 | 3300025936 | Bacteria | 10270 |
| 111 | Ga0207665_10000452 | 3300025939 | Bacteria | 28218 |
| 112 | Ga0207665_10001278 | 3300025939 | Bacteria | 16983 |
| 113 | Ga0207665_10012247 | 3300025939 | Bacteria | 5632 |
| 114 | Ga0207689_10088786 | 3300025942 | Bacteria | 2539 |
| 115 | Ga0207661_10003897 | 3300025944 | Bacteria | 10410 |
| 116 | Ga0207679_10275465 | 3300025945 | Bacteria | 1441 |
| 117 | Ga0207651_10096016 | 3300025960 | Bacteria | 2185 |
| 118 | Ga0207640_10258732 | 3300025981 | Bacteria | 1355 |
| 119 | Ga0207677_10000005 | 3300026023 | Bacteria | 287656 |
| 120 | Ga0207703_10000155 | 3300026035 | Bacteria | 79031 |
| 121 | Ga0207639_10008755 | 3300026041 | Bacteria | 6952 |
| 122 | Ga0207698_10139784 | 3300026142 | Bacteria | 2084 |
| 123 | Ga0207428_10190032 | 3300027907 | Bacteria | 1548 |
| 124 | Ga0265338_10102283 | 3300028800 | Bacteria | 2330 |
| 125 | Ga0307511_10003171 | 3300030521 | Bacteria | 16934 |
| 126 | Ga0265340_10017372 | 3300031247 | Bacteria | 3721 |
| 127 | Ga0265339_10022338 | 3300031249 | Bacteria | 3667 |
| 128 | Ga0307507_10113385 | 3300033179 | Bacteria | 2203 |
| 129 | Ga0373934_0011988 | 3300035086 | Bacteria | 3270 |
| 130 | Ga0373936_0001091 | 3300035113 | Bacteria | 9724 |
| 131 | Ga0373936_0003150 | 3300035113 | Bacteria | 6174 |
| 132 | Ga0373945_0001605 | 3300035116 | Bacteria | 6923 |
| 133 | Ga0373943_0000624 | 3300035170 | Bacteria | 15324 |
| 134 | Ga0373946_0002175 | 3300035171 | Bacteria | 6887 |
| 135 | Ga0373924_0010050 | 3300035410 | Bacteria | 3483 |
| 136 | Ga0373924_0071773 | 3300035410 | Bacteria | 1461 |
| 137 | Ga0373935_0009973 | 3300035692 | Bacteria | 5688 |
| 138 | Ga0373927_0001195 | 3300035695 | Bacteria | 19689 |
| 139 | Ga0373947_0001474 | 3300035725 | Bacteria | 14499 |
| 140 | Ga0373925_0002382 | 3300037068 | Bacteria | 15079 |
| 141 | Ga0373925_0021612 | 3300037068 | Bacteria | 4690 |
| 142 | Ga0395900_0051083 | 3300037418 | Bacteria | 4259 |
| 143 | Ga0395900_0070561 | 3300037418 | Bacteria | 3592 |
| 144 | Ga0395905_0128350 | 3300037471 | Bacteria | 2385 |
| 145 | Ga0395905_0365355 | 3300037471 | Bacteria | 1336 |
| 146 | Ga0436364_0250170 | 3300037853 | Bacteria | 7306 |
| 147 | Ga0436364_0287407 | 3300037853 | Bacteria | 132611 |
| 148 | Ga0436364_0726609 | 3300037853 | Bacteria | 3028 |
| 149 | Ga0436364_0815261 | 3300037853 | Bacteria | 12233 |
| 150 | Ga0395901_0023610 | 3300038443 | Bacteria | 6305 |
| 151 | Ga0395901_0211699 | 3300038443 | Bacteria | 2029 |
| 152 | Ga0436365_0173513 | 3300039437 | Bacteria | 54651 |
| 153 | Ga0436365_0571202 | 3300039437 | Bacteria | 14772 |
| 154 | Ga0436365_1001863 | 3300039437 | Bacteria | 1366 |
| 155 | Ga0436365_1409292 | 3300039437 | Bacteria | 2359 |
| 156 | Ga0436365_1846348 | 3300039437 | Bacteria | 8008 |
| 157 | Ga0436362_0147887 | 3300039453 | Bacteria | 3069 |
| 158 | Ga0436362_0233287 | 3300039453 | Bacteria | 1865 |
| 159 | Ga0436362_0281234 | 3300039453 | Bacteria | 2430 |
| 160 | Ga0451853_0500950 | 3300041512 | Bacteria | 2444 |
| 161 | Ga0466969_0011647 | 3300044656 | Bacteria | 4652 |
| 162 | Ga0466969_0013106 | 3300044656 | Bacteria | 4369 |
| 163 | Ga0466966_0029716 | 3300044684 | Bacteria | 3553 |
| 164 | Ga0466966_0050415 | 3300044684 | Bacteria | 2648 |
| 165 | Ga0466961_0011982 | 3300044693 | Bacteria | 5542 |
| 166 | Ga0466961_0012144 | 3300044693 | Bacteria | 5506 |
| 167 | Ga0466961_0026490 | 3300044693 | Bacteria | 3728 |
| 168 | Ga0466961_0027292 | 3300044693 | Bacteria | 3671 |
| 169 | Ga0466961_0027972 | 3300044693 | Bacteria | 3626 |
| 170 | Ga0466963_0069621 | 3300044694 | Bacteria | 2365 |
| 171 | Ga0466964_0099927 | 3300044706 | Bacteria | 1277 |
| 172 | Ga0466970_0004955 | 3300044765 | Bacteria | 6579 |
| 173 | Ga0466959_0023318 | 3300045049 | Bacteria | 4579 |
| 174 | Ga0466958_0175090 | 3300045836 | Bacteria | 1360 |
| 175 | Ga0466967_0231557 | 3300045976 | Bacteria | 1759 |
| 176 | Ga0495651_0026949 | 3300046462 | Bacteria | 4474 |
| 177 | Ga0495639_0009405 | 3300046475 | Bacteria | 4191 |
| 178 | Ga0495662_0009439 | 3300046476 | Bacteria | 4783 |
| 179 | Ga0495664_0001819 | 3300046477 | Bacteria | 11322 |
| 180 | Ga0495608_0032693 | 3300046511 | Bacteria | 3516 |
| 181 | Ga0495628_0221405 | 3300046516 | Bacteria | 1421 |
| 182 | Ga0495630_0036823 | 3300046517 | Bacteria | 3657 |
| 183 | Ga0495648_0011788 | 3300046524 | Bacteria | 6560 |
| 184 | Ga0495652_0035268 | 3300046529 | Bacteria | 4355 |
| 185 | Ga0495640_0022273 | 3300046533 | Bacteria | 4634 |
| 186 | Ga0495667_0013048 | 3300046559 | Bacteria | 5627 |
| 187 | Ga0495634_0023603 | 3300046642 | Bacteria | 4320 |
| 188 | Ga0495635_0003617 | 3300046663 | Bacteria | 10709 |
| 189 | Ga0495624_0008765 | 3300046690 | Bacteria | 7037 |
| 190 | Ga0495600_0093812 | 3300046809 | Bacteria | 1957 |
| 191 | Ga0495674_0003251 | 3300047319 | Bacteria | 15782 |
| 192 | Ga0495676_0022802 | 3300047321 | Bacteria | 5441 |
| 193 | Ga0495680_0019263 | 3300047322 | Bacteria | 5769 |
| 194 | Ga0495687_034631 | 3300047443 | Bacteria | 2279 |
| 195 | Ga0495684_0020785 | 3300047471 | Bacteria | 5057 |
| 196 | Ga0495684_0023512 | 3300047471 | Bacteria | 4738 |
| 197 | Ga0495686_0000087 | 3300047472 | Bacteria | 196747 |
| 198 | Ga0496104_0000014 | 3300048907 | Bacteria | 377972 |
| 199 | Ga0496112_0001367 | 3300048915 | Bacteria | 18584 |
| 200 | Ga0501032_0073128 | 3300049569 | Bacteria | 2284 |
| 201 | Ga0501037_0211047 | 3300049573 | Bacteria | 1369 |
| 202 | Ga0501047_0000515 | 3300049581 | Bacteria | 41775 |
| 203 | Ga0501047_0107597 | 3300049581 | Bacteria | 2670 |
| 204 | Ga0501047_0279650 | 3300049581 | Bacteria | 1514 |
| 205 | Ga0501069_0001971 | 3300049585 | Bacteria | 10264 |
| 206 | Ga0501070_0014796 | 3300049586 | Bacteria | 6565 |
| 207 | Ga0501070_0019755 | 3300049586 | Bacteria | 5651 |
| 208 | Ga0501070_0078161 | 3300049586 | Bacteria | 2739 |
| 209 | Ga0501074_0052615 | 3300049590 | Bacteria | 2939 |
| 210 | Ga0501080_0007042 | 3300049742 | Bacteria | 10153 |
| 211 | Ga0501035_0000657 | 3300049822 | Bacteria | 38123 |
| 212 | Ga0501044_0001599 | 3300049823 | Bacteria | 26490 |
| 213 | Ga0501044_0025250 | 3300049823 | Bacteria | 6299 |
| 214 | nmdc:mga05p37_126805_c1 | 3300050507 | Bacteria | 3134 |
| 215 | nmdc:mga05p37_419543_c1 | 3300050507 | Bacteria | 1557 |
| 216 | Ga0495601_0058478 | 3300053077 | Bacteria | 2443 |
| 217 | Ga0495601_0128889 | 3300053077 | Bacteria | 1647 |
| 218 | Ga0495619_0009946 | 3300053085 | Bacteria | 5990 |
| 219 | Ga0500660_052831 | 3300053100 | Bacteria | 2000 |
| 220 | Ga0466962_0038457 | 3300061719 | Bacteria | 2291 |
| 221 | 2508671251 | 2508501039 | Bacteria | 9978592 |
| 222 | 2559422526 | 2558860280 | Bacteria | 11429938 |
| 223 | 2676202652 | 2675902999 | Bacteria | 9438463 |
| 224 | 2689962818 | 2687453737 | Bacteria | 11203906 |
| 225 | 2753077067 | 2751185734 | Bacteria | 8863695 |
| 226 | 2774847228 | 2773857921 | Bacteria | 9435764 |
| 227 | 2870724114 | 2870721527 | Bacteria | 9689237 |
| 228 | 8047716546 | 8047710418 | Bacteria | 11023148 |
| 229 | Ga0466957_0006278 | |||
| 230 | Ga0070658_10000309 | |||
| 231 | Ga0070658_10000672 | |||
| 232 | Ga0070683_100006013 | |||
| 233 | Ga0070683_100087893 | |||
| 234 | Ga0068869_100047417 | |||
| 235 | Ga0070680_100000056 | |||
| 236 | Ga0070680_100016796 | |||
| 237 | Ga0070680_100027019 | |||
| 238 | Ga0070682_100000024 | |||
| 239 | Ga0070660_100031566 | |||
| 240 | Ga0070660_100229980 | |||
| 241 | Ga0070689_100006785 | |||
| 242 | Ga0070692_10061474 | |||
| 243 | Ga0070669_100029755 | |||
| 244 | Ga0070659_100008607 | |||
| 245 | Ga0070659_100012856 | |||
| 246 | Ga0070709_10000353 | |||
| 247 | Ga0070714_100000271 | |||
| 248 | Ga0070714_100001137 | |||
| 249 | Ga0070713_100008205 | |||
| 250 | Ga0070710_10000075 | |||
| 251 | Ga0070711_100003926 | |||
| 252 | Ga0070708_100000196 | |||
| 253 | Ga0070708_100018745 | |||
| 254 | Ga0070681_10000046 | |||
| 255 | Ga0070681_10000262 | |||
| 256 | Ga0070681_10006849 | |||
| 257 | Ga0070681_10070668 | |||
| 258 | Ga0070681_10313851 | |||
| 259 | Ga0070706_100389100 | |||
| 260 | Ga0070698_100210507 | |||
| 261 | Ga0070679_100001397 | |||
| 262 | Ga0070679_100001623 | |||
| 263 | Ga0070679_100007978 | |||
| 264 | Ga0070679_100025362 | |||
| 265 | Ga0070679_100094231 | |||
| 266 | Ga0070684_100003597 | |||
| 267 | Ga0070684_100016311 | |||
| 268 | Ga0070684_100132526 | |||
| 269 | Ga0070697_100070046 | |||
| 270 | Ga0068853_100015911 | |||
| 271 | Ga0070672_100000366 | |||
| 272 | Ga0068855_100161549 | |||
| 273 | Ga0068859_100028364 | |||
| 274 | Ga0068858_100000245 | |||
| 275 | Ga0068862_100315005 | |||
| 276 | Ga0070717_10006650 | |||
| 277 | Ga0070715_10000418 | |||
| 278 | Ga0070716_100000200 | |||
| 279 | Ga0070716_100017144 | |||
| 280 | Ga0070712_100004532 | |||
| 281 | Ga0075428_100261667 | |||
| 282 | Ga0097620_100028362 | |||
| 283 | Ga0111539_10184410 | |||
| 284 | Ga0105245_10008869 | |||
| 285 | Ga0114129_10154558 | |||
| 286 | Ga0114129_10328741 | |||
| 287 | Ga0105242_10095390 | |||
| 288 | Ga0105237_10000028 | |||
| 289 | Ga0105249_10278854 | |||
| 290 | Ga0157371_10017120 | |||
| 291 | Ga0157370_10098083 | |||
| 292 | Ga0157369_10000870 | |||
| 293 | Ga0157369_10004929 | |||
| 294 | Ga0157369_10138067 | |||
| 295 | Ga0157372_10632328 | |||
| 296 | Ga0157375_10000002 | |||
| 297 | Ga0206353_10083345 | |||
| 298 | Ga0206353_11550826 | |||
| 299 | Ga0213876_10000356 | |||
| 300 | Ga0213875_10000895 | |||
| 301 | Ga0213875_10011493 | |||
| 302 | Ga0224712_10049415 | |||
| 303 | Ga0207692_10000170 | |||
| 304 | Ga0207692_10020687 | |||
| 305 | Ga0207685_10014723 | |||
| 306 | Ga0207699_10000107 | |||
| 307 | Ga0207705_10000928 | |||
| 308 | Ga0207705_10002593 | |||
| 309 | Ga0207705_10150376 | |||
| 310 | Ga0207684_10050104 | |||
| 311 | Ga0207707_10000393 | |||
| 312 | Ga0207707_10000737 | |||
| 313 | Ga0207707_10276926 | |||
| 314 | Ga0207671_10003067 | |||
| 315 | Ga0207693_10003124 | |||
| 316 | Ga0207693_10018572 | |||
| 317 | Ga0207663_10000391 | |||
| 318 | Ga0207663_10133812 | |||
| 319 | Ga0207660_10001218 | |||
| 320 | Ga0207660_10003461 | |||
| 321 | Ga0207660_10011523 | |||
| 322 | Ga0207657_10024912 | |||
| 323 | Ga0207657_10067813 | |||
| 324 | Ga0207657_10133528 | |||
| 325 | Ga0207652_10000461 | |||
| 326 | Ga0207652_10000817 | |||
| 327 | Ga0207652_10014950 | |||
| 328 | Ga0207652_10073525 | |||
| 329 | Ga0207687_10002608 | |||
| 330 | Ga0207700_10000741 | |||
| 331 | Ga0207700_10022609 | |||
| 332 | Ga0207664_10000780 | |||
| 333 | Ga0207664_10001527 | |||
| 334 | Ga0207664_10005209 | |||
| 335 | Ga0207664_10053224 | |||
| 336 | Ga0207690_10002308 | |||
| 337 | Ga0207690_10034998 | |||
| 338 | Ga0207670_10002168 | |||
| 339 | Ga0207665_10000452 | |||
| 340 | Ga0207665_10001278 | |||
| 341 | Ga0207665_10012247 | |||
| 342 | Ga0207689_10088786 | |||
| 343 | Ga0207661_10003897 | |||
| 344 | Ga0207679_10275465 | |||
| 345 | Ga0207651_10096016 | |||
| 346 | Ga0207640_10258732 | |||
| 347 | Ga0207677_10000005 | |||
| 348 | Ga0207703_10000155 | |||
| 349 | Ga0207639_10008755 | |||
| 350 | Ga0207698_10139784 | |||
| 351 | Ga0207428_10190032 | |||
| 352 | Ga0265338_10102283 | |||
| 353 | Ga0307511_10003171 | |||
| 354 | Ga0265340_10017372 | |||
| 355 | Ga0265339_10022338 | |||
| 356 | Ga0307507_10113385 | |||
| 357 | Ga0373934_0011988 | |||
| 358 | Ga0373936_0001091 | |||
| 359 | Ga0373936_0003150 | |||
| 360 | Ga0373945_0001605 | |||
| 361 | Ga0373943_0000624 | |||
| 362 | Ga0373946_0002175 | |||
| 363 | Ga0373924_0010050 | |||
| 364 | Ga0373924_0071773 | |||
| 365 | Ga0373935_0009973 | |||
| 366 | Ga0373927_0001195 | |||
| 367 | Ga0373947_0001474 | |||
| 368 | Ga0373925_0002382 | |||
| 369 | Ga0373925_0021612 | |||
| 370 | Ga0395900_0051083 | |||
| 371 | Ga0395900_0070561 | |||
| 372 | Ga0395905_0128350 | |||
| 373 | Ga0395905_0365355 | |||
| 374 | Ga0436364_0250170 | |||
| 375 | Ga0436364_0287407 | |||
| 376 | Ga0436364_0726609 | |||
| 377 | Ga0436364_0815261 | |||
| 378 | Ga0395901_0023610 | |||
| 379 | Ga0395901_0211699 | |||
| 380 | Ga0436365_0173513 | |||
| 381 | Ga0436365_0571202 | |||
| 382 | Ga0436365_1001863 | |||
| 383 | Ga0436365_1409292 | |||
| 384 | Ga0436365_1846348 | |||
| 385 | Ga0436362_0147887 | |||
| 386 | Ga0436362_0233287 | |||
| 387 | Ga0436362_0281234 | |||
| 388 | Ga0451853_0500950 | |||
| 389 | Ga0466969_0011647 | |||
| 390 | Ga0466969_0013106 | |||
| 391 | Ga0466966_0029716 | |||
| 392 | Ga0466966_0050415 | |||
| 393 | Ga0466961_0011982 | |||
| 394 | Ga0466961_0012144 | |||
| 395 | Ga0466961_0026490 | |||
| 396 | Ga0466961_0027292 | |||
| 397 | Ga0466961_0027972 | |||
| 398 | Ga0466963_0069621 | |||
| 399 | Ga0466964_0099927 | |||
| 400 | Ga0466970_0004955 | |||
| 401 | Ga0466959_0023318 | |||
| 402 | Ga0466958_0175090 | |||
| 403 | Ga0466967_0231557 | |||
| 404 | Ga0495651_0026949 | |||
| 405 | Ga0495639_0009405 | |||
| 406 | Ga0495662_0009439 | |||
| 407 | Ga0495664_0001819 | |||
| 408 | Ga0495608_0032693 | |||
| 409 | Ga0495628_0221405 | |||
| 410 | Ga0495630_0036823 | |||
| 411 | Ga0495648_0011788 | |||
| 412 | Ga0495652_0035268 | |||
| 413 | Ga0495640_0022273 | |||
| 414 | Ga0495667_0013048 | |||
| 415 | Ga0495634_0023603 | |||
| 416 | Ga0495635_0003617 | |||
| 417 | Ga0495624_0008765 | |||
| 418 | Ga0495600_0093812 | |||
| 419 | Ga0495674_0003251 | |||
| 420 | Ga0495676_0022802 | |||
| 421 | Ga0495680_0019263 | |||
| 422 | Ga0495687_034631 | |||
| 423 | Ga0495684_0020785 | |||
| 424 | Ga0495684_0023512 | |||
| 425 | Ga0495686_0000087 | |||
| 426 | Ga0496104_0000014 | |||
| 427 | Ga0496112_0001367 | |||
| 428 | Ga0501032_0073128 | |||
| 429 | Ga0501037_0211047 | |||
| 430 | Ga0501047_0000515 | |||
| 431 | Ga0501047_0107597 | |||
| 432 | Ga0501047_0279650 | |||
| 433 | Ga0501069_0001971 | |||
| 434 | Ga0501070_0014796 | |||
| 435 | Ga0501070_0019755 | |||
| 436 | Ga0501070_0078161 | |||
| 437 | Ga0501074_0052615 | |||
| 438 | Ga0501080_0007042 | |||
| 439 | Ga0501035_0000657 | |||
| 440 | Ga0501044_0001599 | |||
| 441 | Ga0501044_0025250 | |||
| 442 | nmdc:mga05p37_126805_c1 | |||
| 443 | nmdc:mga05p37_419543_c1 | |||
| 444 | Ga0495601_0058478 | |||
| 445 | Ga0495601_0128889 | |||
| 446 | Ga0495619_0009946 | |||
| 447 | Ga0500660_052831 | |||
| 448 | Ga0466962_0038457 | |||
| 449 | 2508671251 | |||
| 450 | 2559422526 | |||
| 451 | 2676202652 | |||
| 452 | 2689962818 | |||
| 453 | 2753077067 | |||
| 454 | 2774847228 | |||
| 455 | 2870724114 | |||
| 456 | 8047716546 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 8biv-assembly1.cif.gz_A | cystathionine gamma-lyase n360s mutant from toxoplasma gondii | 0.9705 | 43 | 420 |
| 4l0o-assembly3.cif.gz_C | structure determination of cystathionine gamma-synthase from helicobacter pylori | 0.9688 | 43 | 420 |
| 8biw-assembly1.cif.gz_E | cystathionine gamma-lyase n360s mutant in complex with dl-propargylglycine | 0.9671 | 43 | 420 |
| 5eig-assembly2.cif.gz_G | engineered human cystathionine gamma lyase (e59t, e339v) to deplet cysteine | 0.9647 | 46 | 422 |
| 4hf8-assembly1.cif.gz_A | crystal structure of l-methionine gamma-lyase from citrobacter freundii with glycine | 0.9646 | 43 | 423 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_A0A0P0VYR6_1_109_3.40.640.10 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9924 | 172 | 279 | 3.40.640.10 |
| af_A0A0P0VYR6_1_109_3.40.640.10 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9745 | 172 | 279 | 3.40.640.10 |
| af_I1JN71_90_331_3.40.640.10 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9582 | 42 | 277 | 3.40.640.10 |
| af_A4IBL4_19_270_3.40.640.10 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9562 | 37 | 279 | 3.40.640.10 |
| af_P32929_263_402_3.90.1150.10 | Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 | 0.9532 | 282 | 422 | 3.90.1150.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-D6PBJ9-F1-model_v4 | Uncharacterized protein | 0.9872 | 121 | 261 |
GO:0005737
GO:0016846 GO:0019346 GO:0030170 |
| AF-A0A139DGF1-F1-model_v4 | Cystathionine gamma-synthase | 0.9836 | 209 | 419 |
GO:0005737
GO:0016846 GO:0019346 GO:0030170 |
| AF-A0A2V8EVP9-F1-model_v4 | Cystathionine gamma-synthase | 0.9808 | 207 | 419 |
GO:0004123
GO:0005737 GO:0019343 GO:0019346 GO:0030170 |
| AF-A0A529ZDV4-F1-model_v4 | Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | 0.9786 | 120 | 228 |
GO:0003962
GO:0004123 GO:0005737 GO:0008483 GO:0019343 GO:0019346 GO:0030170 |
| AF-A0A162C2Y4-F1-model_v4 | Putative Cystathionine gamma-lyase | 0.9766 | 108 | 244 |
GO:0004123
GO:0019344 GO:0019346 GO:0019450 GO:0030170 GO:0044540 GO:0047804 GO:0080146 |