F340279
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 227 | 135 | 220 | 457 |
Family's Representative Sequence
| Representative Sequence | 3300046512|Ga0495610_0002428|Ga0495610_0002428_409_1899 |
| Length | 496 |
| Sequence | MTVFLCLLRSISSIIRPPAFILWRSNSTFVKTDLAIDMKKFSLLFSAVLLCAQVKAQDSLAIRKIYDEALVNGQCYDNLRYLCKNIGQRISGSANAQKAVDWSKKLMDGYGFDKVYLQEVMVPHWVRGAKEEAAIIDGKTRIPVPIVALGMSIATPKAGITADVIEVKSIKELEGLGENIVKGKIVFFNRAFDPRFIETGMAYGTAGDQRFMGPAVAAKLGAAGVIVRSLTEIIDDYPHTGATLAAPGSKMIPAAAISTKAANRLSTMLKLRKFPAAKFYFKQNCELLPDVKSYNVIGEITGSENPNKFITVGGHLDSWDLAEGAHDDGTGVMQSVEVLRIFKAVGYKPKNSVRAVFFMNEENGHKGGTKYAELAAQNKEQHIAAIETDEGGFTPRGFSFADVSKDFIKRVNDNFKSILEPYDVDKLTIGGAGTDIEPMKETLPGVVLIGFRPDSQRYFDLHHTAKDVFENVNKRELELGAAGMAAFIYLIDQHGL |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2599185184 | Mucilaginibacter sp. NFR10 | Isolate | Rhizoplane |
| 2 | 2852623160 | Mucilaginibacter sp. AK015 | Isolate | Rhizosphere |
| 3 | 2884634485 | Algoriphagus kandeliae XY-J91 | Isolate | Unclassified |
| 4 | 2884933994 | Mucilaginibacter sp. 14171R-50 | Isolate | Rhizosphere |
| 5 | 2910245624 | Adhaeribacter radiodurans KUDC8001 | Isolate | Rhizosphere |
| 6 | 2919437846 | Mucilaginibacter pocheonensis 3262 | Isolate | Rhizosphere |
| 7 | 2928078545 | Mucilaginibacter rubeus 1215 | Isolate | Unclassified |
| 8 | 2928147474 | Mucilaginibacter rubeus 2025 | Isolate | Unclassified |
| 9 | 2932082852 | Mucilaginibacter sp. 3215 | Isolate | Rhizosphere |
| 10 | 2977232053 | Mucilaginibacter terrae SORGH_AS 422 | Isolate | Unclassified |
| 11 | 3300001989 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 | Metagenome | Rhizosphere |
| 12 | 3300001990 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 | Metagenome | Rhizosphere |
| 13 | 3300002067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 | Metagenome | Rhizosphere |
| 14 | 3300002077 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 | Metagenome | Rhizosphere |
| 15 | 3300002737 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA | Metagenome | Endosphere |
| 16 | 3300003214 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL | Metagenome | Endosphere |
| 17 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 18 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 19 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 20 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 21 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 22 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 24 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 27 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 29 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 30 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 31 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 32 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 33 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 34 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 35 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 36 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 37 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 38 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 39 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 40 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 41 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 42 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 43 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 45 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 46 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 48 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 59 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 60 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 61 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 62 | 3300025231 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 63 | 3300025233 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 64 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 65 | 3300025261 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) | Metagenome | Endosphere |
| 66 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 67 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 93 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 94 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 95 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 96 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 97 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 98 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 99 | 3300035115 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 | Metagenome | Rhizosphere |
| 100 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 101 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 102 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 103 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 104 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 105 | 3300042005 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 | Metagenome | Rhizosphere |
| 106 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 107 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 108 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 109 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 110 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 111 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046513 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046538 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300046665 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300046692 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300046810 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300049459 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300049523 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control | Metagenome | Rhizosphere |
| 130 | 3300049677 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_A_3_control | Metagenome | Rhizosphere |
| 131 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 132 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 133 | 3300053125 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere | Metagenome | Endosphere |
| 134 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 135 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 95.59 |
| Metatranscriptomes | 0 |
| Isolates | 4.41 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 9.69 |
| Nodule | 0 |
| Rhizoplane | 0.44 |
| Rhizosphere | 78.41 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 11.45 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24739J22299_10009918 | 3300001989 | Bacteria | 3541 |
| 2 | JGI24737J22298_10006478 | 3300001990 | Bacteria | 3998 |
| 3 | JGI24735J21928_10000009 | 3300002067 | Bacteria | 247425 |
| 4 | JGI24744J21845_10005364 | 3300002077 | Bacteria | 2653 |
| 5 | JGI25162J39368_1000016 | 3300002737 | Bacteria | 288734 |
| 6 | JGI25162J39368_1001170 | 3300002737 | Bacteria | 15590 |
| 7 | JGI25165J46597_1001860 | 3300003214 | Bacteria | 8716 |
| 8 | rootH1_10021887 | 3300003316 | Bacteria | 4471 |
| 9 | rootH1_10054911 | 3300003316 | Bacteria | 39663 |
| 10 | rootH1_10054911 | 3300003323 | Unclassified | 4728 |
| 11 | rootH2_10002709 | 3300003320 | Bacteria | 20537 |
| 12 | rootH2_10020466 | 3300003320 | Bacteria | 25707 |
| 13 | rootH2_10133352 | 3300003320 | Bacteria | 2353 |
| 14 | rootL2_10114922 | 3300003322 | Bacteria | 4910 |
| 15 | rootH1_10004576 | 3300003323 | Bacteria | 68064 |
| 16 | rootH1_10013865 | 3300003323 | Bacteria | 59066 |
| 17 | rootH1_10017130 | 3300003323 | Bacteria | 2435 |
| 18 | rootH1_10024619 | 3300003323 | Bacteria | 6325 |
| 19 | rootH1_10032714 | 3300003316 | Bacteria | 9071 |
| 20 | rootH1_10032714 | 3300003323 | Unclassified | 1584 |
| 21 | rootH1_10084298 | 3300003316 | Bacteria | 2644 |
| 22 | rootH1_10084298 | 3300003323 | Bacteria | 5886 |
| 23 | rootH1_10087241 | 3300003323 | Bacteria | 2876 |
| 24 | rootH1_10151418 | 3300003323 | Bacteria | 1463 |
| 25 | Ga0055531_10001073 | 3300003794 | Bacteria | 21468 |
| 26 | Ga0070658_10000008 | 3300005327 | Bacteria | 319912 |
| 27 | Ga0070658_10044571 | 3300005327 | Bacteria | 3585 |
| 28 | Ga0068869_100070699 | 3300005334 | Unclassified | 2583 |
| 29 | Ga0070660_100013698 | 3300005339 | Bacteria | 5828 |
| 30 | Ga0070660_100107100 | 3300005339 | Bacteria | 2221 |
| 31 | Ga0070660_100236503 | 3300005339 | Unclassified | 1487 |
| 32 | Ga0070669_100028036 | 3300005353 | Unclassified | 4054 |
| 33 | Ga0070659_100000669 | 3300005366 | Bacteria | 24919 |
| 34 | Ga0070659_100012436 | 3300005366 | Bacteria | 6312 |
| 35 | Ga0070659_100150720 | 3300005366 | Bacteria | 1897 |
| 36 | Ga0070667_100120759 | 3300005367 | Unclassified | 2279 |
| 37 | Ga0070663_100006435 | 3300005455 | Bacteria | 7063 |
| 38 | Ga0070678_100004366 | 3300005456 | Bacteria | 8005 |
| 39 | Ga0070662_100001291 | 3300005457 | Bacteria | 15376 |
| 40 | Ga0068867_100000904 | 3300005459 | Bacteria | 20133 |
| 41 | Ga0068853_100025164 | 3300005539 | Unclassified | 4994 |
| 42 | Ga0068853_100221739 | 3300005539 | Bacteria | 1727 |
| 43 | Ga0070665_100000118 | 3300005548 | Bacteria | 149830 |
| 44 | Ga0068855_100000155 | 3300005563 | Bacteria | 86903 |
| 45 | Ga0068855_100008588 | 3300005563 | Bacteria | 12346 |
| 46 | Ga0068855_100105275 | 3300005563 | Bacteria | 3244 |
| 47 | Ga0068855_100113755 | 3300005563 | Bacteria | 3104 |
| 48 | Ga0068855_100135743 | 3300005563 | Bacteria | 2807 |
| 49 | Ga0068857_100192252 | 3300005577 | Unclassified | 1859 |
| 50 | Ga0068856_100000371 | 3300005614 | Bacteria | 49295 |
| 51 | Ga0068856_100003383 | 3300005614 | Bacteria | 16151 |
| 52 | Ga0068856_100015228 | 3300005614 | Bacteria | 7432 |
| 53 | Ga0068856_100306277 | 3300005614 | Bacteria | 1607 |
| 54 | Ga0068852_100006974 | 3300005616 | Bacteria | 8220 |
| 55 | Ga0068864_100020694 | 3300005618 | Bacteria | 5506 |
| 56 | Ga0068864_100167514 | 3300005618 | Unclassified | 2001 |
| 57 | Ga0068858_100037035 | 3300005842 | Unclassified | 4523 |
| 58 | Ga0068860_100126429 | 3300005843 | Bacteria | 2450 |
| 59 | Ga0070717_10115781 | 3300006028 | Bacteria | 2291 |
| 60 | Ga0075366_10000076 | 3300006195 | Bacteria | 38500 |
| 61 | Ga0075366_10004538 | 3300006195 | Bacteria | 7456 |
| 62 | Ga0075366_10048132 | 3300006195 | Bacteria | 2528 |
| 63 | Ga0097621_100000174 | 3300006237 | Bacteria | 40714 |
| 64 | Ga0097621_100243413 | 3300006237 | Unclassified | 1573 |
| 65 | Ga0068871_100000060 | 3300006358 | Bacteria | 59245 |
| 66 | Ga0068865_100003187 | 3300006881 | Bacteria | 9822 |
| 67 | Ga0105240_10084237 | 3300009093 | Bacteria | 3898 |
| 68 | Ga0105240_10110873 | 3300009093 | Bacteria | 3320 |
| 69 | Ga0105240_10115896 | 3300009093 | Bacteria | 3233 |
| 70 | Ga0105247_10000918 | 3300009101 | Bacteria | 22128 |
| 71 | Ga0105241_10000884 | 3300009174 | Bacteria | 22627 |
| 72 | Ga0105241_10005050 | 3300009174 | Bacteria | 9738 |
| 73 | Ga0105237_10003032 | 3300009545 | Bacteria | 20265 |
| 74 | Ga0105237_10004759 | 3300009545 | Bacteria | 15603 |
| 75 | Ga0105237_10005372 | 3300009545 | Bacteria | 14491 |
| 76 | Ga0105237_10006927 | 3300009545 | Bacteria | 12496 |
| 77 | Ga0105237_10015874 | 3300009545 | Bacteria | 7831 |
| 78 | Ga0105237_10087863 | 3300009545 | Bacteria | 3098 |
| 79 | Ga0105237_10298753 | 3300009545 | Bacteria | 1613 |
| 80 | Ga0105238_10015038 | 3300009551 | Bacteria | 7836 |
| 81 | Ga0105249_10002666 | 3300009553 | Bacteria | 15430 |
| 82 | Ga0105239_10000009 | 3300010375 | Bacteria | 361182 |
| 83 | Ga0105239_10006868 | 3300010375 | Bacteria | 13134 |
| 84 | Ga0105239_10009470 | 3300010375 | Bacteria | 10975 |
| 85 | Ga0105239_10024198 | 3300010375 | Bacteria | 6688 |
| 86 | Ga0105239_10096948 | 3300010375 | Bacteria | 3258 |
| 87 | Ga0105239_10169339 | 3300010375 | Bacteria | 2442 |
| 88 | Ga0105239_10272626 | 3300010375 | Bacteria | 1903 |
| 89 | Ga0157373_10000034 | 3300013100 | Bacteria | 124053 |
| 90 | Ga0157371_10012469 | 3300013102 | Bacteria | 6495 |
| 91 | Ga0157371_10031622 | 3300013102 | Bacteria | 3813 |
| 92 | Ga0157371_10070552 | 3300013102 | Bacteria | 2473 |
| 93 | Ga0157370_10108455 | 3300013104 | Unclassified | 2596 |
| 94 | Ga0157369_10001235 | 3300013105 | Bacteria | 31847 |
| 95 | Ga0157374_10000948 | 3300013296 | Bacteria | 25182 |
| 96 | Ga0157378_10005395 | 3300013297 | Bacteria | 11210 |
| 97 | Ga0163162_10000012 | 3300013306 | Bacteria | 292674 |
| 98 | Ga0163162_10083026 | 3300013306 | Bacteria | 3277 |
| 99 | Ga0157372_10000041 | 3300013307 | Bacteria | 158494 |
| 100 | Ga0157372_10000632 | 3300013307 | Bacteria | 38535 |
| 101 | Ga0157372_10019171 | 3300013307 | Bacteria | 7366 |
| 102 | Ga0157375_10022034 | 3300013308 | Bacteria | 5859 |
| 103 | Ga0207427_100215 | 3300025231 | Bacteria | 50603 |
| 104 | Ga0209437_100048 | 3300025233 | Bacteria | 405107 |
| 105 | Ga0209437_100262 | 3300025233 | Bacteria | 81344 |
| 106 | Ga0209026_1000251 | 3300025250 | Bacteria | 67956 |
| 107 | Ga0209026_1005520 | 3300025250 | Bacteria | 3384 |
| 108 | Ga0209233_1000029 | 3300025261 | Bacteria | 641642 |
| 109 | Ga0209455_1007142 | 3300025272 | Bacteria | 3193 |
| 110 | Ga0207710_10006684 | 3300025900 | Bacteria | 4913 |
| 111 | Ga0207647_10000231 | 3300025904 | Bacteria | 46261 |
| 112 | Ga0207645_10001132 | 3300025907 | Bacteria | 22072 |
| 113 | Ga0207705_10000026 | 3300025909 | Bacteria | 256051 |
| 114 | Ga0207654_10005920 | 3300025911 | Bacteria | 6154 |
| 115 | Ga0207654_10027388 | 3300025911 | Bacteria | 3097 |
| 116 | Ga0207695_10083325 | 3300025913 | Bacteria | 3230 |
| 117 | Ga0207695_10123445 | 3300025913 | Bacteria | 2555 |
| 118 | Ga0207671_10000815 | 3300025914 | Bacteria | 39441 |
| 119 | Ga0207671_10001918 | 3300025914 | Bacteria | 23087 |
| 120 | Ga0207671_10002535 | 3300025914 | Bacteria | 19470 |
| 121 | Ga0207671_10004491 | 3300025914 | Bacteria | 13287 |
| 122 | Ga0207671_10103591 | 3300025914 | Bacteria | 2158 |
| 123 | Ga0207657_10048944 | 3300025919 | Bacteria | 3687 |
| 124 | Ga0207657_10083764 | 3300025919 | Bacteria | 2675 |
| 125 | Ga0207644_10020874 | 3300025931 | Bacteria | 4456 |
| 126 | Ga0207690_10001078 | 3300025932 | Bacteria | 17444 |
| 127 | Ga0207690_10009245 | 3300025932 | Bacteria | 5853 |
| 128 | Ga0207706_10000406 | 3300025933 | Bacteria | 46320 |
| 129 | Ga0207704_10000307 | 3300025938 | Bacteria | 22913 |
| 130 | Ga0207691_10070982 | 3300025940 | Bacteria | 3144 |
| 131 | Ga0207691_10272905 | 3300025940 | Bacteria | 1456 |
| 132 | Ga0207689_10097110 | 3300025942 | Unclassified | 2420 |
| 133 | Ga0207667_10000953 | 3300025949 | Bacteria | 36919 |
| 134 | Ga0207667_10010896 | 3300025949 | Bacteria | 10599 |
| 135 | Ga0207667_10011059 | 3300025949 | Bacteria | 10513 |
| 136 | Ga0207667_10064125 | 3300025949 | Bacteria | 3837 |
| 137 | Ga0207712_10011368 | 3300025961 | Bacteria | 5672 |
| 138 | Ga0207712_10091222 | 3300025961 | Bacteria | 2244 |
| 139 | Ga0207703_10116559 | 3300026035 | Unclassified | 2287 |
| 140 | Ga0207678_10013110 | 3300026067 | Bacteria | 7272 |
| 141 | Ga0207702_10000163 | 3300026078 | Bacteria | 79263 |
| 142 | Ga0207702_10007269 | 3300026078 | Bacteria | 9472 |
| 143 | Ga0207702_10048508 | 3300026078 | Bacteria | 3581 |
| 144 | Ga0207648_10000647 | 3300026089 | Bacteria | 39104 |
| 145 | Ga0207676_10029977 | 3300026095 | Bacteria | 4078 |
| 146 | Ga0207683_10054159 | 3300026121 | Bacteria | 3517 |
| 147 | Ga0207698_10000620 | 3300026142 | Bacteria | 20611 |
| 148 | Ga0268266_10000121 | 3300028379 | Bacteria | 154995 |
| 149 | Ga0268264_10146790 | 3300028381 | Unclassified | 2110 |
| 150 | Ga0307515_10000081 | 3300028794 | Bacteria | 224753 |
| 151 | Ga0307515_10021848 | 3300028794 | Bacteria | 11319 |
| 152 | Ga0307515_10054781 | 3300028794 | Bacteria | 5846 |
| 153 | Ga0307515_10087855 | 3300028794 | Unclassified | 3939 |
| 154 | Ga0265338_10056610 | 3300028800 | Bacteria | 3476 |
| 155 | Ga0316576_10016412 | 3300031727 | Bacteria | 5000 |
| 156 | Ga0307414_10002248 | 3300032004 | Bacteria | 10082 |
| 157 | Ga0307414_10033124 | 3300032004 | Bacteria | 3411 |
| 158 | Ga0307415_100177001 | 3300032126 | Bacteria | 1670 |
| 159 | Ga0307507_10000078 | 3300033179 | Bacteria | 151026 |
| 160 | Ga0307510_10004160 | 3300033180 | Bacteria | 16992 |
| 161 | Ga0373941_0009888 | 3300035115 | Bacteria | 2417 |
| 162 | Ga0395899_0000024 | 3300037312 | Bacteria | 357402 |
| 163 | Ga0395899_0014267 | 3300037312 | Bacteria | 6067 |
| 164 | Ga0395900_0000140 | 3300037418 | Bacteria | 121917 |
| 165 | Ga0395900_0004237 | 3300037418 | Bacteria | 15226 |
| 166 | Ga0395898_0001454 | 3300037466 | Bacteria | 33553 |
| 167 | Ga0395898_0458037 | 3300037466 | Bacteria | 1214 |
| 168 | Ga0395905_0000248 | 3300037471 | Bacteria | 81042 |
| 169 | Ga0395905_0001526 | 3300037471 | Bacteria | 27691 |
| 170 | Ga0395901_0000145 | 3300038443 | Bacteria | 91739 |
| 171 | Ga0395901_0007709 | 3300038443 | Bacteria | 10856 |
| 172 | Ga0439448_0000218 | 3300042005 | Bacteria | 12114 |
| 173 | Ga0451577_0068249 | 3300042876 | Bacteria | 3171 |
| 174 | Ga0451577_0090739 | 3300042876 | Bacteria | 2727 |
| 175 | Ga0466969_0010209 | 3300044656 | Bacteria | 4978 |
| 176 | Ga0453684_0000660 | 3300044712 | Bacteria | 123924 |
| 177 | Ga0453684_0020403 | 3300044712 | Bacteria | 9996 |
| 178 | Ga0453684_0104619 | 3300044712 | Bacteria | 3455 |
| 179 | Ga0451576_0046302 | 3300045051 | Unclassified | 4580 |
| 180 | Ga0451576_0056953 | 3300045051 | Bacteria | 4086 |
| 181 | Ga0451576_0098632 | 3300045051 | Bacteria | 3039 |
| 182 | Ga0466958_0053209 | 3300045836 | Bacteria | 2454 |
| 183 | Ga0495650_0000023 | 3300046471 | Bacteria | 527763 |
| 184 | Ga0495585_0000323 | 3300046492 | Bacteria | 47094 |
| 185 | Ga0495585_0008040 | 3300046492 | Bacteria | 6411 |
| 186 | Ga0495583_0023879 | 3300046506 | Bacteria | 3084 |
| 187 | Ga0495606_0000448 | 3300046507 | Bacteria | 67282 |
| 188 | Ga0495606_0009411 | 3300046507 | Bacteria | 8272 |
| 189 | Ga0495610_0002428 | 3300046512 | Bacteria | 15669 |
| 190 | Ga0495616_0006533 | 3300046513 | Bacteria | 7042 |
| 191 | Ga0495616_0009648 | 3300046513 | Bacteria | 5628 |
| 192 | Ga0495648_0019493 | 3300046524 | Bacteria | 4767 |
| 193 | Ga0495609_0002041 | 3300046538 | Bacteria | 12717 |
| 194 | Ga0495633_0000042 | 3300046558 | Bacteria | 173748 |
| 195 | Ga0495633_0002181 | 3300046558 | Bacteria | 14037 |
| 196 | Ga0495668_0000011 | 3300046616 | Bacteria | 472186 |
| 197 | Ga0495625_0000018 | 3300046660 | Bacteria | 299567 |
| 198 | Ga0495625_0000462 | 3300046660 | Bacteria | 60985 |
| 199 | Ga0495625_0003845 | 3300046660 | Bacteria | 14513 |
| 200 | Ga0495661_0022903 | 3300046665 | Bacteria | 4060 |
| 201 | Ga0495671_0068193 | 3300046692 | Bacteria | 1749 |
| 202 | Ga0495649_0000015 | 3300046694 | Bacteria | 246431 |
| 203 | Ga0495649_0096590 | 3300046694 | Bacteria | 1572 |
| 204 | Ga0495660_0042096 | 3300046810 | Bacteria | 2525 |
| 205 | Ga0495687_000888 | 3300047443 | Bacteria | 31504 |
| 206 | Ga0495686_0000112 | 3300047472 | Bacteria | 168354 |
| 207 | Ga0495686_0106264 | 3300047472 | Bacteria | 1688 |
| 208 | Ga0495678_012092 | 3300049459 | Bacteria | 4102 |
| 209 | Ga0501300_001565 | 3300049523 | Unclassified | 3439 |
| 210 | Ga0501247_000258 | 3300049677 | Unclassified | 3765 |
| 211 | nmdc:mga0k408_19062_c1 | 3300050493 | Bacteria | 3831 |
| 212 | nmdc:mga0k408_6423_c1 | 3300050493 | Bacteria | 6272 |
| 213 | nmdc:mga0k408_96_c1 | 3300050493 | Bacteria | 42356 |
| 214 | Ga0500644_0002088 | 3300053088 | Bacteria | 5073 |
| 215 | Ga0500618_000273 | 3300053125 | Bacteria | 39574 |
| 216 | Ga0500616_0036098 | 3300053153 | Bacteria | 2684 |
| 217 | Ga0500622_0000009 | 3300053156 | Bacteria | 419980 |
| 218 | Ga0500622_0000016 | 3300053156 | Bacteria | 337983 |
| 219 | Ga0500622_0000302 | 3300053156 | Bacteria | 50416 |
| 220 | Ga0500622_0000776 | 3300053156 | Bacteria | 27727 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300042876 | Ga0451577_0090739 | Ga0451577_0090739_1597_2703 | 368 |
| 2 | 3300037466 | Ga0395898_0458037 | Ga0395898_0458037_32_1156 | 373 |
| 3 | 3300045051 | Ga0451576_0098632 | Ga0451576_0098632_1868_3019 | 383 |
| 4 | 3300026121 | Ga0207683_10054159 | Ga0207683_100541591 | 396 |
| 5 | 3300053156 | Ga0500622_0000016 | Ga0500622_0000016_270989_272362 | 396 |
| 6 | 3300049523 | Ga0501300_001565 | Ga0501300_001565_2139_3383 | 412 |
| 7 | 3300053156 | Ga0500622_0000009 | Ga0500622_0000009_265856_267229 | 423 |
| 8 | 3300032004 | Ga0307414_10033124 | Ga0307414_100331241 | 431 |
| 9 | 3300044712 | Ga0453684_0104619 | Ga0453684_0104619_1256_2629 | 432 |
| 10 | 3300006195 | Ga0075366_10048132 | Ga0075366_100481322 | 433 |
| 11 | 3300045836 | Ga0466958_0053209 | Ga0466958_0053209_1080_2381 | 433 |
| 12 | 3300009093 | Ga0105240_10115896 | Ga0105240_101158962 | 435 |
| 13 | 3300009174 | Ga0105241_10000884 | Ga0105241_1000088420 | 435 |
| 14 | 3300009093 | Ga0105240_10084237 | Ga0105240_100842373 | 436 |
| 15 | 3300032004 | Ga0307414_10002248 | Ga0307414_100022484 | 438 |
| 16 | 3300028794 | Ga0307515_10054781 | Ga0307515_100547812 | 440 |
| 17 | 3300047472 | Ga0495686_0106264 | Ga0495686_0106264_287_1675 | 440 |
| 18 | 3300013104 | Ga0157370_10108455 | Ga0157370_101084552 | 444 |
| 19 | iso_pu_bacteria | 2884634485 | 2884637268 | 444 |
| 20 | 3300033180 | Ga0307510_10004160 | Ga0307510_100041606 | 448 |
| 21 | 3300046694 | Ga0495649_0096590 | Ga0495649_0096590_137_1519 | 448 |
| 22 | 3300046810 | Ga0495660_0042096 | Ga0495660_0042096_920_2299 | 448 |
| 23 | 3300003320 | rootH2_10020466 | rootH2_1002046620 | 449 |
| 24 | 3300003323 | rootH1_10087241 | rootH1_100872412 | 449 |
| 25 | 3300005334 | Ga0068869_100070699 | Ga0068869_1000706992 | 449 |
| 26 | 3300005353 | Ga0070669_100028036 | Ga0070669_1000280363 | 449 |
| 27 | 3300005367 | Ga0070667_100120759 | Ga0070667_1001207592 | 449 |
| 28 | 3300005577 | Ga0068857_100192252 | Ga0068857_1001922522 | 449 |
| 29 | 3300005618 | Ga0068864_100020694 | Ga0068864_1000206944 | 449 |
| 30 | 3300005618 | Ga0068864_100167514 | Ga0068864_1001675141 | 449 |
| 31 | 3300005842 | Ga0068858_100037035 | Ga0068858_1000370353 | 449 |
| 32 | 3300005843 | Ga0068860_100126429 | Ga0068860_1001264292 | 449 |
| 33 | 3300009101 | Ga0105247_10000918 | Ga0105247_1000091816 | 449 |
| 34 | 3300009553 | Ga0105249_10002666 | Ga0105249_100026662 | 449 |
| 35 | 3300025900 | Ga0207710_10006684 | Ga0207710_100066843 | 449 |
| 36 | 3300025940 | Ga0207691_10070982 | Ga0207691_100709822 | 449 |
| 37 | 3300025942 | Ga0207689_10097110 | Ga0207689_100971102 | 449 |
| 38 | 3300025961 | Ga0207712_10011368 | Ga0207712_100113683 | 449 |
| 39 | 3300025961 | Ga0207712_10091222 | Ga0207712_100912222 | 449 |
| 40 | 3300026035 | Ga0207703_10116559 | Ga0207703_101165592 | 449 |
| 41 | 3300026095 | Ga0207676_10029977 | Ga0207676_100299773 | 449 |
| 42 | 3300028381 | Ga0268264_10146790 | Ga0268264_101467902 | 449 |
| 43 | 3300031727 | Ga0316576_10016412 | Ga0316576_100164123 | 449 |
| 44 | 3300044712 | Ga0453684_0020403 | Ga0453684_0020403_6130_7491 | 449 |
| 45 | 3300049677 | Ga0501247_000258 | Ga0501247_000258_1315_2682 | 449 |
| 46 | 3300053088 | Ga0500644_0002088 | Ga0500644_0002088_3429_4799 | 449 |
| 47 | 3300053153 | Ga0500616_0036098 | Ga0500616_0036098_280_1650 | 449 |
| 48 | 3300053156 | Ga0500622_0000776 | Ga0500622_0000776_25092_26462 | 449 |
| 49 | 3300003316 | rootH1_10054911 | rootH1_100549118 | 450 |
| 50 | 3300003322 | rootL2_10114922 | rootL2_101149222 | 450 |
| 51 | 3300003323 | rootH1_10024619 | rootH1_100246192 | 450 |
| 52 | 3300003794 | Ga0055531_10001073 | Ga0055531_1000107315 | 450 |
| 53 | 3300006237 | Ga0097621_100243413 | Ga0097621_1002434132 | 450 |
| 54 | 3300028794 | Ga0307515_10087855 | Ga0307515_100878555 | 450 |
| 55 | 3300042876 | Ga0451577_0068249 | Ga0451577_0068249_1147_2514 | 450 |
| 56 | 3300044712 | Ga0453684_0000660 | Ga0453684_0000660_88798_90165 | 450 |
| 57 | 3300003320 | rootH2_10133352 | rootH2_101333522 | 451 |
| 58 | 3300003323 | rootH1_10013865 | rootH1_1001386521 | 451 |
| 59 | 3300003323 | rootH1_10032714 | rootH1_100327141 | 451 |
| 60 | 3300006028 | Ga0070717_10115781 | Ga0070717_101157812 | 451 |
| 61 | 3300032126 | Ga0307415_100177001 | Ga0307415_1001770012 | 451 |
| 62 | 3300045051 | Ga0451576_0046302 | Ga0451576_0046302_3193_4560 | 451 |
| 63 | 3300045051 | Ga0451576_0056953 | Ga0451576_0056953_2699_4066 | 451 |
| 64 | iso_pu_bacteria | 2910245624 | 2910249233 | 451 |
| 65 | 3300003316 | rootH1_10021887 | rootH1_100218872 | 454 |
| 66 | 3300005327 | Ga0070658_10000008 | Ga0070658_1000000886 | 454 |
| 67 | 3300005339 | Ga0070660_100013698 | Ga0070660_1000136985 | 454 |
| 68 | 3300005339 | Ga0070660_100236503 | Ga0070660_1002365031 | 454 |
| 69 | 3300005539 | Ga0068853_100221739 | Ga0068853_1002217392 | 454 |
| 70 | 3300005614 | Ga0068856_100003383 | Ga0068856_10000338316 | 454 |
| 71 | 3300010375 | Ga0105239_10169339 | Ga0105239_101693392 | 454 |
| 72 | 3300013297 | Ga0157378_10005395 | Ga0157378_100053958 | 454 |
| 73 | 3300025909 | Ga0207705_10000026 | Ga0207705_1000002686 | 454 |
| 74 | 3300025919 | Ga0207657_10048944 | Ga0207657_100489442 | 454 |
| 75 | 3300025949 | Ga0207667_10010896 | Ga0207667_100108968 | 454 |
| 76 | 3300035115 | Ga0373941_0009888 | Ga0373941_0009888_910_2286 | 454 |
| 77 | 3300037312 | Ga0395899_0014267 | Ga0395899_0014267_1495_2871 | 454 |
| 78 | 3300037418 | Ga0395900_0000140 | Ga0395900_0000140_92226_93602 | 454 |
| 79 | 3300037418 | Ga0395900_0004237 | Ga0395900_0004237_8377_9753 | 454 |
| 80 | 3300037471 | Ga0395905_0001526 | Ga0395905_0001526_18679_20055 | 454 |
| 81 | 3300038443 | Ga0395901_0007709 | Ga0395901_0007709_6564_7940 | 454 |
| 82 | 3300050493 | nmdc:mga0k408_6423_c1 | nmdc:mga0k408_6423_c1_4678_6054 | 454 |
| 83 | iso_pu_bacteria | 2919437846 | 2919440414 | 454 |
| 84 | 3300005339 | Ga0070660_100107100 | Ga0070660_1001071002 | 455 |
| 85 | 3300005366 | Ga0070659_100000669 | Ga0070659_10000066913 | 455 |
| 86 | 3300013100 | Ga0157373_10000034 | Ga0157373_1000003479 | 455 |
| 87 | 3300013307 | Ga0157372_10000632 | Ga0157372_100006325 | 455 |
| 88 | 3300025250 | Ga0209026_1005520 | Ga0209026_10055203 | 455 |
| 89 | 3300025919 | Ga0207657_10083764 | Ga0207657_100837642 | 455 |
| 90 | 3300025932 | Ga0207690_10001078 | Ga0207690_1000107814 | 455 |
| 91 | 3300028800 | Ga0265338_10056610 | Ga0265338_100566101 | 455 |
| 92 | iso_pu_bacteria | 2852623160 | 2852626342 | 455 |
| 93 | iso_pu_bacteria | 2884933994 | 2884934793 | 455 |
| 94 | iso_pu_bacteria | 2977232053 | 2977235045 | 455 |
| 95 | 3300001990 | JGI24737J22298_10006478 | JGI24737J22298_100064782 | 456 |
| 96 | 3300002077 | JGI24744J21845_10005364 | JGI24744J21845_100053642 | 456 |
| 97 | 3300003320 | rootH2_10002709 | rootH2_1000270912 | 456 |
| 98 | 3300003323 | rootH1_10017130 | rootH1_100171301 | 456 |
| 99 | 3300005327 | Ga0070658_10044571 | Ga0070658_100445711 | 456 |
| 100 | 3300005366 | Ga0070659_100012436 | Ga0070659_1000124362 | 456 |
| 101 | 3300005366 | Ga0070659_100150720 | Ga0070659_1001507202 | 456 |
| 102 | 3300005455 | Ga0070663_100006435 | Ga0070663_1000064354 | 456 |
| 103 | 3300005456 | Ga0070678_100004366 | Ga0070678_1000043661 | 456 |
| 104 | 3300005457 | Ga0070662_100001291 | Ga0070662_1000012916 | 456 |
| 105 | 3300005459 | Ga0068867_100000904 | Ga0068867_10000090417 | 456 |
| 106 | 3300005539 | Ga0068853_100025164 | Ga0068853_1000251644 | 456 |
| 107 | 3300005548 | Ga0070665_100000118 | Ga0070665_10000011858 | 456 |
| 108 | 3300005563 | Ga0068855_100008588 | Ga0068855_1000085888 | 456 |
| 109 | 3300005563 | Ga0068855_100105275 | Ga0068855_1001052752 | 456 |
| 110 | 3300005614 | Ga0068856_100000371 | Ga0068856_10000037151 | 456 |
| 111 | 3300005616 | Ga0068852_100006974 | Ga0068852_1000069742 | 456 |
| 112 | 3300006237 | Ga0097621_100000174 | Ga0097621_1000001748 | 456 |
| 113 | 3300006358 | Ga0068871_100000060 | Ga0068871_10000006019 | 456 |
| 114 | 3300006881 | Ga0068865_100003187 | Ga0068865_1000031877 | 456 |
| 115 | 3300009093 | Ga0105240_10110873 | Ga0105240_101108733 | 456 |
| 116 | 3300009174 | Ga0105241_10005050 | Ga0105241_1000505010 | 456 |
| 117 | 3300009545 | Ga0105237_10015874 | Ga0105237_100158747 | 456 |
| 118 | 3300009551 | Ga0105238_10015038 | Ga0105238_100150382 | 456 |
| 119 | 3300010375 | Ga0105239_10272626 | Ga0105239_102726262 | 456 |
| 120 | 3300013102 | Ga0157371_10012469 | Ga0157371_100124692 | 456 |
| 121 | 3300013105 | Ga0157369_10001235 | Ga0157369_1000123518 | 456 |
| 122 | 3300013296 | Ga0157374_10000948 | Ga0157374_1000094810 | 456 |
| 123 | 3300013306 | Ga0163162_10000012 | Ga0163162_1000001272 | 456 |
| 124 | 3300013307 | Ga0157372_10000041 | Ga0157372_10000041136 | 456 |
| 125 | 3300013308 | Ga0157375_10022034 | Ga0157375_100220343 | 456 |
| 126 | 3300025904 | Ga0207647_10000231 | Ga0207647_1000023122 | 456 |
| 127 | 3300025907 | Ga0207645_10001132 | Ga0207645_100011324 | 456 |
| 128 | 3300025911 | Ga0207654_10005920 | Ga0207654_100059201 | 456 |
| 129 | 3300025911 | Ga0207654_10027388 | Ga0207654_100273882 | 456 |
| 130 | 3300025913 | Ga0207695_10083325 | Ga0207695_100833253 | 456 |
| 131 | 3300025914 | Ga0207671_10103591 | Ga0207671_101035912 | 456 |
| 132 | 3300025931 | Ga0207644_10020874 | Ga0207644_100208744 | 456 |
| 133 | 3300025932 | Ga0207690_10009245 | Ga0207690_100092454 | 456 |
| 134 | 3300025933 | Ga0207706_10000406 | Ga0207706_1000040612 | 456 |
| 135 | 3300025938 | Ga0207704_10000307 | Ga0207704_100003072 | 456 |
| 136 | 3300025940 | Ga0207691_10272905 | Ga0207691_102729051 | 456 |
| 137 | 3300025949 | Ga0207667_10011059 | Ga0207667_100110593 | 456 |
| 138 | 3300026067 | Ga0207678_10013110 | Ga0207678_100131105 | 456 |
| 139 | 3300026078 | Ga0207702_10000163 | Ga0207702_1000016368 | 456 |
| 140 | 3300026089 | Ga0207648_10000647 | Ga0207648_1000064728 | 456 |
| 141 | 3300026142 | Ga0207698_10000620 | Ga0207698_100006207 | 456 |
| 142 | 3300028379 | Ga0268266_10000121 | Ga0268266_1000012198 | 456 |
| 143 | 3300037312 | Ga0395899_0000024 | Ga0395899_0000024_275858_277276 | 456 |
| 144 | 3300037466 | Ga0395898_0001454 | Ga0395898_0001454_28378_29784 | 456 |
| 145 | 3300037471 | Ga0395905_0000248 | Ga0395905_0000248_61918_63324 | 456 |
| 146 | 3300038443 | Ga0395901_0000145 | Ga0395901_0000145_57752_59158 | 456 |
| 147 | 3300042005 | Ga0439448_0000218 | Ga0439448_0000218_6663_8045 | 456 |
| 148 | 3300044656 | Ga0466969_0010209 | Ga0466969_0010209_1385_2803 | 456 |
| 149 | 3300047443 | Ga0495687_000888 | Ga0495687_000888_16687_18069 | 456 |
| 150 | 3300053156 | Ga0500622_0000302 | Ga0500622_0000302_23521_24957 | 456 |
| 151 | iso_pu_bacteria | 2599185184 | 2599479198 | 456 |
| 152 | iso_pu_bacteria | 2928078545 | 2928082487 | 456 |
| 153 | iso_pu_bacteria | 2928147474 | 2928148925 | 456 |
| 154 | iso_pu_bacteria | 2932082852 | 2932087459 | 456 |
| 155 | 3300002737 | JGI25162J39368_1001170 | JGI25162J39368_10011702 | 457 |
| 156 | 3300003214 | JGI25165J46597_1001860 | JGI25165J46597_10018608 | 457 |
| 157 | 3300003323 | rootH1_10004576 | rootH1_100045762 | 457 |
| 158 | 3300003323 | rootH1_10151418 | rootH1_101514181 | 457 |
| 159 | 3300005563 | Ga0068855_100000155 | Ga0068855_10000015516 | 457 |
| 160 | 3300005614 | Ga0068856_100015228 | Ga0068856_1000152285 | 457 |
| 161 | 3300005614 | Ga0068856_100306277 | Ga0068856_1003062771 | 457 |
| 162 | 3300009545 | Ga0105237_10005372 | Ga0105237_100053727 | 457 |
| 163 | 3300009545 | Ga0105237_10006927 | Ga0105237_100069279 | 457 |
| 164 | 3300009545 | Ga0105237_10298753 | Ga0105237_102987531 | 457 |
| 165 | 3300010375 | Ga0105239_10000009 | Ga0105239_1000000933 | 457 |
| 166 | 3300010375 | Ga0105239_10006868 | Ga0105239_100068682 | 457 |
| 167 | 3300025231 | Ga0207427_100215 | Ga0207427_10021518 | 457 |
| 168 | 3300025233 | Ga0209437_100048 | Ga0209437_100048183 | 457 |
| 169 | 3300025250 | Ga0209026_1000251 | Ga0209026_10002515 | 457 |
| 170 | 3300025261 | Ga0209233_1000029 | Ga0209233_1000029194 | 457 |
| 171 | 3300025272 | Ga0209455_1007142 | Ga0209455_10071422 | 457 |
| 172 | 3300025914 | Ga0207671_10000815 | Ga0207671_1000081527 | 457 |
| 173 | 3300025914 | Ga0207671_10002535 | Ga0207671_100025358 | 457 |
| 174 | 3300025949 | Ga0207667_10000953 | Ga0207667_1000095336 | 457 |
| 175 | 3300026078 | Ga0207702_10007269 | Ga0207702_100072692 | 457 |
| 176 | 3300026078 | Ga0207702_10048508 | Ga0207702_100485084 | 457 |
| 177 | 3300046507 | Ga0495606_0009411 | Ga0495606_0009411_4801_6195 | 457 |
| 178 | 3300002737 | JGI25162J39368_1000016 | JGI25162J39368_100001669 | 458 |
| 179 | 3300005563 | Ga0068855_100113755 | Ga0068855_1001137552 | 458 |
| 180 | 3300006195 | Ga0075366_10000076 | Ga0075366_1000007645 | 458 |
| 181 | 3300009545 | Ga0105237_10003032 | Ga0105237_100030327 | 458 |
| 182 | 3300009545 | Ga0105237_10004759 | Ga0105237_100047599 | 458 |
| 183 | 3300010375 | Ga0105239_10009470 | Ga0105239_100094701 | 458 |
| 184 | 3300010375 | Ga0105239_10024198 | Ga0105239_100241982 | 458 |
| 185 | 3300025233 | Ga0209437_100262 | Ga0209437_10026267 | 458 |
| 186 | 3300025913 | Ga0207695_10123445 | Ga0207695_101234452 | 458 |
| 187 | 3300025914 | Ga0207671_10001918 | Ga0207671_100019182 | 458 |
| 188 | 3300025914 | Ga0207671_10004491 | Ga0207671_100044917 | 458 |
| 189 | 3300028794 | Ga0307515_10000081 | Ga0307515_1000008116 | 458 |
| 190 | 3300028794 | Ga0307515_10021848 | Ga0307515_100218485 | 458 |
| 191 | 3300033179 | Ga0307507_10000078 | Ga0307507_100000781 | 458 |
| 192 | 3300046492 | Ga0495585_0000323 | Ga0495585_0000323_11238_12623 | 458 |
| 193 | 3300046513 | Ga0495616_0009648 | Ga0495616_0009648_2990_4369 | 458 |
| 194 | 3300046524 | Ga0495648_0019493 | Ga0495648_0019493_3125_4510 | 458 |
| 195 | 3300046538 | Ga0495609_0002041 | Ga0495609_0002041_3149_4534 | 458 |
| 196 | 3300046558 | Ga0495633_0000042 | Ga0495633_0000042_96435_97820 | 458 |
| 197 | 3300046616 | Ga0495668_0000011 | Ga0495668_0000011_200768_202153 | 458 |
| 198 | 3300046660 | Ga0495625_0000462 | Ga0495625_0000462_28266_29651 | 458 |
| 199 | 3300046660 | Ga0495625_0003845 | Ga0495625_0003845_6724_8106 | 458 |
| 200 | 3300046665 | Ga0495661_0022903 | Ga0495661_0022903_2320_3702 | 458 |
| 201 | 3300047472 | Ga0495686_0000112 | Ga0495686_0000112_75093_76475 | 458 |
| 202 | 3300049459 | Ga0495678_012092 | Ga0495678_012092_886_2265 | 458 |
| 203 | 3300050493 | nmdc:mga0k408_96_c1 | nmdc:mga0k408_96_c1_36692_38077 | 458 |
| 204 | 3300053125 | Ga0500618_000273 | Ga0500618_000273_2020_3405 | 458 |
| 205 | 3300013306 | Ga0163162_10083026 | Ga0163162_100830262 | 459 |
| 206 | 3300046471 | Ga0495650_0000023 | Ga0495650_0000023_431294_432673 | 459 |
| 207 | 3300046492 | Ga0495585_0008040 | Ga0495585_0008040_316_1695 | 459 |
| 208 | 3300046506 | Ga0495583_0023879 | Ga0495583_0023879_166_1545 | 459 |
| 209 | 3300046507 | Ga0495606_0000448 | Ga0495606_0000448_36384_37763 | 459 |
| 210 | 3300046512 | Ga0495610_0002428 | Ga0495610_0002428_409_1899 | 459 |
| 211 | 3300046513 | Ga0495616_0006533 | Ga0495616_0006533_4368_5747 | 459 |
| 212 | 3300046558 | Ga0495633_0002181 | Ga0495633_0002181_2834_4324 | 459 |
| 213 | 3300046660 | Ga0495625_0000018 | Ga0495625_0000018_110387_111766 | 459 |
| 214 | 3300046692 | Ga0495671_0068193 | Ga0495671_0068193_144_1523 | 459 |
| 215 | 3300046694 | Ga0495649_0000015 | Ga0495649_0000015_38888_40267 | 459 |
| 216 | 3300001989 | JGI24739J22299_10009918 | JGI24739J22299_100099182 | 460 |
| 217 | 3300002067 | JGI24735J21928_10000009 | JGI24735J21928_10000009170 | 460 |
| 218 | 3300003323 | rootH1_10084298 | rootH1_100842983 | 460 |
| 219 | 3300005563 | Ga0068855_100135743 | Ga0068855_1001357432 | 460 |
| 220 | 3300006195 | Ga0075366_10004538 | Ga0075366_100045384 | 460 |
| 221 | 3300009545 | Ga0105237_10087863 | Ga0105237_100878632 | 460 |
| 222 | 3300010375 | Ga0105239_10096948 | Ga0105239_100969482 | 460 |
| 223 | 3300013102 | Ga0157371_10031622 | Ga0157371_100316222 | 460 |
| 224 | 3300013102 | Ga0157371_10070552 | Ga0157371_100705522 | 460 |
| 225 | 3300013307 | Ga0157372_10019171 | Ga0157372_100191713 | 460 |
| 226 | 3300025949 | Ga0207667_10064125 | Ga0207667_100641253 | 460 |
| 227 | 3300050493 | nmdc:mga0k408_19062_c1 | nmdc:mga0k408_19062_c1_1744_3126 | 460 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3iib-assembly1.cif.gz_A-2 | crystal structure of peptidase m28 precursor (yp_926796.1) from shewanella amazonensis sb2b at 1.70 a resolution | 0.9436 | 19 | 456 |
| 3iib-assembly1.cif.gz_A-2 | crystal structure of peptidase m28 precursor (yp_926796.1) from shewanella amazonensis sb2b at 1.70 a resolution | 0.9149 | 19 | 456 |
| 1lfw-assembly1.cif.gz_A | crystal structure of pepv | 0.7928 | 258 | 337 |
| 3b7i-assembly1.cif.gz_A | crystal structure of the s228a mutant of the aminopeptidase from vibrio proteolyticus in complex with leucine phosphonic acid | 0.7926 | 257 | 456 |
| 7uoi-assembly1.cif.gz_A-2 | crystallographic structure of dape from enterococcus faecium | 0.777 | 258 | 364 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3iibA02 | Alpha Beta;3-Layer(bba) Sandwich;Glucose Oxidase; domain 1; | 0.9332 | 95 | 246 | 3.50.30.30 |
| 3iibA01 | Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases | 0.9283 | 19 | 458 | 3.40.630.10 |
| af_Q54MN6_157_296_3.40.630.10 | Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases | 0.9236 | 94 | 246 | 3.40.630.10 |
| 3iibA02 | Alpha Beta;3-Layer(bba) Sandwich;Glucose Oxidase; domain 1; | 0.9089 | 95 | 246 | 3.50.30.30 |
| af_Q54MN6_157_296_3.40.630.10 | Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases | 0.905 | 94 | 246 | 3.40.630.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A4Q3DL94-F1-model_v4 | Peptidase M28 family protein | 0.9913 | 16 | 205 |
GO:0005576
GO:0070573 |
| AF-A0A7Y5WCK3-F1-model_v4 | Carboxypeptidase Q (Plasma glutamate carboxypeptidase) | 0.9846 | 16 | 459 |
GO:0004180
GO:0005576 GO:0005764 GO:0070573 |
| AF-A0A4Q3DIQ3-F1-model_v4 | Carboxypeptidase Q (Plasma glutamate carboxypeptidase) | 0.9824 | 296 | 459 |
GO:0004180
GO:0005615 GO:0005764 GO:0006508 GO:0043171 GO:0070573 |
| AF-A0A4Q3CJB9-F1-model_v4 | Carboxypeptidase Q (Plasma glutamate carboxypeptidase) | 0.9817 | 1 | 341 |
GO:0004180
GO:0005576 GO:0005764 GO:0070573 |
| AF-A0A6N6PK42-F1-model_v4 | deleted | 0.9767 | 4 | 460 |
|
Predicted Structure (AlphaFold2)
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