F340278

General Info

Members Datasets Scaffolds Average Seq Length
227 135 213 194

Family's Representative Sequence

Representative Sequence 3300046507|Ga0495606_0000948|Ga0495606_0000948_34814_35488
Length 224
Sequence MIATTIYSLFMAVAIKAVGTVQECEMRVSKEKSAENREALLAAASRLFREKGVDGVGVAEVAKEAGLTHGALYAHFPSKDLLAAEAFSHGFAQRMDRARAWAGDRHPSFEEYLDSLYTTRQRDDLTTSCPMTASASDVGRQGEALSRSFAQAFEEEVSMMAGAIDETVPQDVRRQLAVASIAAQIGAIAVSRAVAKTDIALSDEVLLATRDAIAAAFAASTAAR

Samples

Sample ID Description Type Environment
1 2513237166 Paraburkholderia azotifigens UYPR1.413 Isolate Nodule
2 2515154123 Trinickia symbiotica JPY347 Isolate Nodule
3 2562617112 Burkholderia sp. BT03 Isolate Rhizosphere
4 2643221554 Duganella sp. Root1480D1 Isolate Unclassified
5 2643221638 Duganella sp. Root336D2 Isolate Unclassified
6 2711768613 Burkholderia sp. BT03 Isolate Rhizosphere
7 2718218334 Luteibacter rhizovicinus LJ96 Isolate Rhizosphere
8 2734482264 Dyella sp. AD052 Isolate Unclassified
9 2791355137 Paraburkholderia piptadeniae STM7183 Isolate Unclassified
10 2904615490 Paraburkholderia franconis CNPSo 3157 Isolate Unclassified
11 2921643360 Paraburkholderia steynii HC1.1ba Isolate Nodule
12 2941471342 Luteibacter sp. 621 Isolate Unclassified
13 3005506211 Bradyrhizobium diazoefficiens SZCCT0449 Isolate Unclassified
14 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
15 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
16 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
17 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
18 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
19 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
20 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
21 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
22 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
23 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
24 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
25 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
26 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
27 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
28 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
29 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
30 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
31 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
32 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
33 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
34 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
35 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
36 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
37 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
38 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
39 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
40 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
41 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
44 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
45 3300016635 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A10 Metagenome Rhizosphere
46 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
47 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
48 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
49 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
50 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
51 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
52 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
54 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
55 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
56 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
57 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
58 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
60 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
61 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
66 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
67 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
68 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
69 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
70 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
71 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
72 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
73 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
74 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
75 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
76 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
77 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
78 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
79 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
80 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
81 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
82 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
83 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
84 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
85 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
86 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
87 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
88 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
89 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
90 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
91 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
92 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
93 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
94 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
95 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
96 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
97 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
98 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
99 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
100 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
101 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
102 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
103 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
104 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
105 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
106 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
107 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
108 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
109 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
110 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
111 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
112 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
113 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
114 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
115 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
116 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
117 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
118 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
119 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
120 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
121 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
122 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
123 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
124 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
125 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
126 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
127 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
128 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
129 3300053124 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 endosphere Metagenome Endosphere
130 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
131 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
132 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
133 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
134 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
135 642555112 Paraburkholderia phymatum STM815 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 93.83
Metatranscriptomes 0
Isolates 6.17

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 42.29
Nodule 1.76
Rhizoplane 6.17
Rhizosphere 30.4
Stem 0
Stem Tuber 0
Unclassified 19.38

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25158J39367_1000624 3300002739 Bacteria 7014
2 JGI25158J39367_1000928 3300002739 Bacteria 5463
3 JGI25152J39213_1000242 3300002773 Bacteria 36400
4 JGI25150J39212_1000487 3300002774 Bacteria 16704
5 JGI25159J45721_1000340 3300002987 Bacteria 21597
6 JGI25153J46596_10011128 3300003215 Bacteria 4002
7 rootH1_10172188 3300003316 Bacteria 1700
8 rootH2_10042848 3300003320 Bacteria 3091
9 rootH2_10151465 3300003320 Bacteria 1989
10 rootL2_10051894 3300003322 Bacteria 1292
11 rootL2_10241848 3300003322 Bacteria 1034
12 rootH1_10049529 3300003323 Bacteria 1640
13 JGI25160J50197_1000647 3300003354 Bacteria 19376
14 JGI25160J50197_1013946 3300003354 Bacteria 2712
15 JGI25161J50226_1000166 3300003374 Bacteria 45462
16 Ga0055526_1000418 3300003771 Bacteria 34250
17 Ga0055526_1000602 3300003771 Bacteria 28135
18 Ga0055526_1013722 3300003771 Bacteria 3400
19 Ga0055537_1000530 3300003773 Bacteria 22218
20 Ga0055537_1005568 3300003773 Bacteria 3358
21 Ga0055537_1013752 3300003773 Bacteria 1503
22 Ga0055524_1000223 3300003775 Bacteria 60211
23 Ga0055524_1001410 3300003775 Bacteria 13833
24 Ga0055524_1006257 3300003775 Bacteria 5189
25 Ga0055524_1006702 3300003775 Bacteria 4973
26 Ga0055534_1000351 3300003784 Bacteria 29531
27 Ga0055534_1005780 3300003784 Bacteria 3240
28 Ga0055528_1000174 3300003790 Bacteria 54435
29 Ga0055528_1000441 3300003790 Bacteria 33267
30 Ga0055530_10000262 3300003791 Bacteria 47466
31 Ga0055530_10005691 3300003791 Bacteria 5819
32 Ga0055530_10026566 3300003791 Bacteria 1597
33 Ga0055530_10042297 3300003791 Unclassified 1106
34 Ga0055531_10001030 3300003794 Bacteria 22072
35 Ga0055531_10011491 3300003794 Bacteria 4262
36 Ga0055543_1000136 3300004625 Bacteria 60943
37 Ga0065165_1001278 3300005262 Bacteria 28419
38 Ga0065165_1006383 3300005262 Bacteria 6206
39 Ga0070692_10065965 3300005345 Bacteria 1918
40 Ga0070708_100090519 3300005445 Bacteria 2785
41 Ga0070707_100778494 3300005468 Bacteria 920
42 Ga0070679_100379517 3300005530 Bacteria 1360
43 Ga0068853_100441450 3300005539 Bacteria 1223
44 Ga0070665_100263197 3300005548 Bacteria 1726
45 Ga0081540_1003716 3300005983 Bacteria 11958
46 Ga0099794_10000301 3300007265 Bacteria 16918
47 Ga0105240_10226476 3300009093 Bacteria 2175
48 Ga0163162_10075795 3300013306 Bacteria 3425
49 Ga0182007_10028101 3300015262 Bacteria 1934
50 Ga0183361_10030 3300016635 Bacteria 55672
51 Ga0163161_10139869 3300017792 Bacteria 1832
52 Ga0213872_10000741 3300021361 Bacteria 24226
53 Ga0213872_10124115 3300021361 Bacteria 1140
54 Ga0209436_100216 3300025208 Bacteria 26447
55 Ga0209436_100660 3300025208 Bacteria 14682
56 Ga0207425_1000001 3300025245 Bacteria 2525432
57 Ga0207425_1000039 3300025245 Bacteria 219078
58 Ga0207425_1014450 3300025245 Bacteria 1792
59 Ga0209129_1000001 3300025258 Bacteria 1452436
60 Ga0209129_1001725 3300025258 Bacteria 11783
61 Ga0209565_1000017 3300025263 Bacteria 462438
62 Ga0209565_1003504 3300025263 Bacteria 5046
63 Ga0209565_1007997 3300025263 Bacteria 2798
64 Ga0209565_1020513 3300025263 Unclassified 1393
65 Ga0209565_1046649 3300025263 Unclassified 790
66 Ga0209673_1000007 3300025273 Bacteria 634477
67 Ga0209673_1000015 3300025273 Bacteria 530618
68 Ga0209673_1020929 3300025273 Bacteria 2301
69 Ga0209130_1001043 3300025284 Bacteria 21026
70 Ga0209130_1002563 3300025284 Bacteria 8871
71 Ga0209130_1003200 3300025284 Bacteria 7226
72 Ga0209675_1000009 3300025291 Bacteria 562872
73 Ga0209675_1001665 3300025291 Bacteria 12372
74 Ga0209675_1011521 3300025291 Bacteria 2926
75 Ga0209025_1006317 3300025294 Bacteria 9253
76 Ga0209564_1000036 3300025295 Bacteria 423455
77 Ga0209564_1000055 3300025295 Bacteria 343782
78 Ga0209564_1000109 3300025295 Bacteria 212912
79 Ga0209564_1003564 3300025295 Bacteria 10441
80 Ga0209564_1009956 3300025295 Bacteria 4444
81 Ga0209564_1020301 3300025295 Bacteria 2438
82 Ga0209564_1027653 3300025295 Bacteria 1836
83 Ga0209758_1000020 3300025297 Bacteria 734220
84 Ga0209050_1000074 3300025298 Bacteria 289334
85 Ga0209050_1000628 3300025298 Bacteria 55015
86 Ga0209050_1001807 3300025298 Bacteria 20922
87 Ga0209050_1046885 3300025298 Unclassified 1131
88 Ga0209256_1000028 3300025299 Bacteria 420213
89 Ga0209256_1000167 3300025299 Bacteria 133419
90 Ga0209256_1000949 3300025299 Bacteria 35147
91 Ga0209256_1002827 3300025299 Bacteria 13252
92 Ga0209256_1013341 3300025299 Bacteria 3053
93 Ga0209256_1052769 3300025299 Bacteria 976
94 Ga0207426_1000037 3300025302 Bacteria 442735
95 Ga0207426_1007950 3300025302 Bacteria 4367
96 Ga0207426_1025047 3300025302 Bacteria 2015
97 Ga0209257_1000003 3300025304 Bacteria 1702593
98 Ga0209257_1001374 3300025304 Bacteria 29209
99 Ga0209257_1003578 3300025304 Bacteria 13168
100 Ga0207647_10002327 3300025904 Bacteria 14427
101 Ga0207707_10086826 3300025912 Bacteria 2733
102 Ga0209588_1000100 3300027671 Bacteria 26866
103 Ga0265325_10000229 3300031241 Bacteria 39809
104 Ga0307509_10000035 3300031507 Bacteria 192339
105 Ga0307408_100000126 3300031548 Bacteria 84345
106 Ga0307408_100012724 3300031548 Bacteria 5579
107 Ga0307408_100110652 3300031548 Bacteria 2109
108 Ga0265314_10030039 3300031711 Bacteria 4028
109 Ga0307516_10068135 3300031730 Bacteria 3428
110 Ga0395905_0000115 3300037471 Bacteria 133996
111 Ga0395905_0387552 3300037471 Bacteria 1292
112 Ga0436361_0125181 3300039447 Bacteria 1588
113 Ga0436361_0562344 3300039447 Bacteria 2199
114 Ga0436361_0708311 3300039447 Bacteria 2674
115 Ga0436361_0745984 3300039447 Bacteria 24266
116 Ga0451795_0604237 3300041456 Bacteria 1309
117 Ga0450898_009031 3300042134 Bacteria 1586
118 Ga0466961_0112380 3300044693 Bacteria 1713
119 Ga0466967_0783636 3300045976 Bacteria 946
120 Ga0495617_000131 3300046452 Bacteria 49764
121 Ga0495603_0009398 3300046455 Bacteria 5907
122 Ga0495650_0000708 3300046471 Bacteria 42664
123 Ga0495580_0169529 3300046472 Bacteria 1509
124 Ga0495605_0006454 3300046474 Bacteria 6739
125 Ga0495584_0004431 3300046491 Bacteria 7560
126 Ga0495607_0096715 3300046501 Bacteria 1589
127 Ga0495583_0001179 3300046506 Bacteria 28207
128 Ga0495606_0000918 3300046507 Bacteria 43503
129 Ga0495606_0000948 3300046507 Bacteria 42725
130 Ga0495606_0002923 3300046507 Bacteria 18873
131 Ga0495606_0003871 3300046507 Bacteria 15451
132 Ga0495620_0000719 3300046515 Bacteria 20409
133 Ga0495620_0005004 3300046515 Bacteria 7426
134 Ga0495631_0000631 3300046518 Bacteria 23012
135 Ga0495648_0008035 3300046524 Bacteria 8351
136 Ga0495663_0008010 3300046525 Bacteria 2922
137 Ga0495642_0057464 3300046528 Bacteria 1609
138 Ga0495665_0046256 3300046531 Bacteria 2311
139 Ga0495622_0000011 3300046557 Bacteria 201507
140 Ga0495622_0015926 3300046557 Bacteria 3496
141 Ga0495589_0008169 3300046794 Bacteria 5471
142 Ga0495672_0030457 3300047320 Bacteria 3384
143 Ga0495676_0006053 3300047321 Bacteria 11118
144 Ga0495683_0002903 3300047323 Bacteria 10137
145 Ga0495687_085057 3300047443 Bacteria 1227
146 Ga0495673_0000151 3300047469 Bacteria 122181
147 Ga0495673_0066230 3300047469 Bacteria 1532
148 Ga0495686_0000019 3300047472 Bacteria 434054
149 Ga0495686_0003030 3300047472 Bacteria 14908
150 Ga0495686_0131938 3300047472 Bacteria 1480
151 Ga0495626_0068868 3300048091 Bacteria 1595
152 Ga0496100_0245125 3300048903 Bacteria 1323
153 Ga0496101_0011542 3300048904 Bacteria 5866
154 Ga0496101_0519046 3300048904 Bacteria 941
155 Ga0496102_0232857 3300048905 Bacteria 1736
156 Ga0496102_0343041 3300048905 Bacteria 1406
157 Ga0496103_0020521 3300048906 Bacteria 3969
158 Ga0496103_0038243 3300048906 Bacteria 2943
159 Ga0496104_0000938 3300048907 Bacteria 25037
160 Ga0496104_0117937 3300048907 Bacteria 2547
161 Ga0496105_0166143 3300048908 Bacteria 1810
162 Ga0496106_0003765 3300048909 Bacteria 11299
163 Ga0496112_0226493 3300048915 Bacteria 1825
164 Ga0496112_0830322 3300048915 Bacteria 848
165 Ga0496116_0260441 3300048919 Bacteria 856
166 Ga0496116_0374512 3300048919 Bacteria 641
167 Ga0496117_0042344 3300048920 Bacteria 3324
168 Ga0496117_0061254 3300048920 Bacteria 2588
169 Ga0496117_0096101 3300048920 Bacteria 1891
170 Ga0496118_0007378 3300048921 Bacteria 11674
171 Ga0496118_0007642 3300048921 Bacteria 11383
172 Ga0496118_0084891 3300048921 Bacteria 2207
173 Ga0496118_0129129 3300048921 Bacteria 1627
174 Ga0496119_0221697 3300048922 Bacteria 967
175 Ga0496121_0000102 3300048924 Bacteria 195341
176 Ga0496121_0000315 3300048924 Bacteria 100898
177 Ga0496121_0018470 3300048924 Bacteria 7029
178 Ga0496121_0029268 3300048924 Bacteria 5100
179 Ga0496121_0079504 3300048924 Bacteria 2603
180 Ga0496121_0115041 3300048924 Bacteria 2043
181 Ga0496122_0001093 3300048925 Bacteria 46994
182 Ga0496122_0027484 3300048925 Bacteria 4862
183 Ga0496122_0060763 3300048925 Bacteria 2780
184 Ga0496123_0002085 3300048926 Bacteria 25741
185 Ga0496123_0026544 3300048926 Bacteria 4334
186 Ga0496123_0061808 3300048926 Bacteria 2404
187 Ga0496123_0191576 3300048926 Bacteria 1057
188 Ga0496124_0474058 3300048927 Bacteria 847
189 Ga0496124_0517295 3300048927 Bacteria 796
190 Ga0496125_0144342 3300048928 Bacteria 1648
191 Ga0496126_0000063 3300048929 Bacteria 256841
192 Ga0496126_0000679 3300048929 Bacteria 62626
193 Ga0496126_0068650 3300048929 Bacteria 3164
194 Ga0495682_0001387 3300049460 Bacteria 13224
195 Ga0501279_002582 3300049775 Bacteria 2367
196 Ga0500578_0074613 3300053086 Bacteria 2161
197 Ga0500644_0001094 3300053088 Bacteria 8000
198 Ga0500646_0007881 3300053090 Bacteria 2723
199 Ga0500651_0008896 3300053093 Bacteria 5939
200 Ga0500566_0007892 3300053094 Bacteria 6302
201 Ga0500555_086482 3300053103 Bacteria 810
202 Ga0500556_0000097 3300053104 Bacteria 81329
203 Ga0500562_037990 3300053108 Bacteria 1279
204 Ga0500595_000001 3300053119 Bacteria 1088438
205 Ga0500617_121397 3300053124 Bacteria 1077
206 Ga0500618_000331 3300053125 Bacteria 34305
207 Ga0500618_024129 3300053125 Bacteria 1466
208 Ga0500652_013237 3300053131 Bacteria 2916
209 Ga0500603_005854 3300053150 Bacteria 2660
210 Ga0500616_0000001 3300053153 Bacteria 1986011
211 Ga0500616_0036859 3300053153 Bacteria 2651
212 Ga0500645_000109 3300053730 Bacteria 65892
213 Ga0500645_123820 3300053730 Bacteria 720

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046491 Ga0495584_0004431 Ga0495584_0004431_4489_5136 157
2 3300053103 Ga0500555_086482 Ga0500555_086482_284_790 161
3 3300047321 Ga0495676_0006053 Ga0495676_0006053_650_1249 167
4 3300046507 Ga0495606_0000918 Ga0495606_0000918_35732_36331 169
5 3300047469 Ga0495673_0066230 Ga0495673_0066230_832_1479 169
6 3300037471 Ga0395905_0000115 Ga0395905_0000115_16842_17489 171
7 3300003790 Ga0055528_1000441 Ga0055528_100044123 172
8 3300025273 Ga0209673_1000015 Ga0209673_100001559 172
9 3300025294 Ga0209025_1006317 Ga0209025_10063172 172
10 3300025295 Ga0209564_1003564 Ga0209564_10035649 172
11 3300025299 Ga0209256_1000949 Ga0209256_100094935 172
12 3300053104 Ga0500556_0000097 Ga0500556_0000097_8408_9046 174
13 3300003322 rootL2_10051894 rootL2_100518941 175
14 iso_pu_bacteria 3005506211 3005507606 177
15 3300048924 Ga0496121_0079504 Ga0496121_0079504_212_838 181
16 iso_pu_bacteria 2513237166 2514046404 181
17 iso_pu_bacteria 2515154123 2515687988 181
18 iso_pu_bacteria 2643221554 2643790791 181
19 iso_pu_bacteria 2643221638 2644211713 181
20 iso_pu_bacteria 2718218334 2721028981 181
21 iso_pu_bacteria 2734482264 2735835439 181
22 iso_pu_bacteria 2791355137 2792839589 181
23 iso_pu_bacteria 2904615490 2904618750 181
24 iso_pu_bacteria 2921643360 2921644643 181
25 iso_pu_bacteria 2941471342 2941475609 181
26 iso_pu_bacteria 642555112 642594138 181
27 3300005548 Ga0070665_100263197 Ga0070665_1002631972 182
28 3300053088 Ga0500644_0001094 Ga0500644_0001094_5350_5919 182
29 3300053093 Ga0500651_0008896 Ga0500651_0008896_1603_2172 182
30 3300053119 Ga0500595_000001 Ga0500595_000001_796974_797543 182
31 3300053131 Ga0500652_013237 Ga0500652_013237_1883_2452 182
32 3300053153 Ga0500616_0000001 Ga0500616_0000001_1182182_1182751 182
33 3300053153 Ga0500616_0036859 Ga0500616_0036859_267_836 182
34 3300053730 Ga0500645_000109 Ga0500645_000109_54169_54738 182
35 3300053730 Ga0500645_123820 Ga0500645_123820_74_643 182
36 3300031241 Ga0265325_10000229 Ga0265325_1000022926 183
37 3300005983 Ga0081540_1003716 Ga0081540_10037165 184
38 3300044693 Ga0466961_0112380 Ga0466961_0112380_328_918 184
39 3300045976 Ga0466967_0783636 Ga0466967_0783636_80_670 184
40 3300049775 Ga0501279_002582 Ga0501279_002582_888_1442 184
41 3300053086 Ga0500578_0074613 Ga0500578_0074613_583_1239 184
42 3300053125 Ga0500618_024129 Ga0500618_024129_316_957 184
43 3300002739 JGI25158J39367_1000624 JGI25158J39367_10006249 185
44 3300002739 JGI25158J39367_1000928 JGI25158J39367_10009286 185
45 3300002773 JGI25152J39213_1000242 JGI25152J39213_100024211 185
46 3300002774 JGI25150J39212_1000487 JGI25150J39212_10004878 185
47 3300002987 JGI25159J45721_1000340 JGI25159J45721_100034012 185
48 3300003215 JGI25153J46596_10011128 JGI25153J46596_100111282 185
49 3300003316 rootH1_10172188 rootH1_101721882 185
50 3300003320 rootH2_10042848 rootH2_100428483 185
51 3300003320 rootH2_10151465 rootH2_101514653 185
52 3300003322 rootL2_10241848 rootL2_102418481 185
53 3300003323 rootH1_10049529 rootH1_100495292 185
54 3300003354 JGI25160J50197_1000647 JGI25160J50197_100064714 185
55 3300003354 JGI25160J50197_1013946 JGI25160J50197_10139463 185
56 3300003374 JGI25161J50226_1000166 JGI25161J50226_10001669 185
57 3300003771 Ga0055526_1000418 Ga0055526_10004185 185
58 3300003771 Ga0055526_1000602 Ga0055526_100060221 185
59 3300003771 Ga0055526_1013722 Ga0055526_10137223 185
60 3300003773 Ga0055537_1000530 Ga0055537_100053024 185
61 3300003773 Ga0055537_1005568 Ga0055537_10055684 185
62 3300003773 Ga0055537_1013752 Ga0055537_10137522 185
63 3300003775 Ga0055524_1000223 Ga0055524_100022333 185
64 3300003775 Ga0055524_1001410 Ga0055524_10014105 185
65 3300003775 Ga0055524_1006257 Ga0055524_10062573 185
66 3300003775 Ga0055524_1006702 Ga0055524_10067027 185
67 3300003784 Ga0055534_1000351 Ga0055534_100035130 185
68 3300003784 Ga0055534_1005780 Ga0055534_10057803 185
69 3300003790 Ga0055528_1000174 Ga0055528_100017434 185
70 3300003791 Ga0055530_10000262 Ga0055530_100002629 185
71 3300003791 Ga0055530_10005691 Ga0055530_100056914 185
72 3300003791 Ga0055530_10026566 Ga0055530_100265663 185
73 3300003791 Ga0055530_10042297 Ga0055530_100422972 185
74 3300003794 Ga0055531_10001030 Ga0055531_100010307 185
75 3300003794 Ga0055531_10011491 Ga0055531_100114913 185
76 3300004625 Ga0055543_1000136 Ga0055543_100013658 185
77 3300005262 Ga0065165_1001278 Ga0065165_100127821 185
78 3300005262 Ga0065165_1006383 Ga0065165_10063832 185
79 3300005345 Ga0070692_10065965 Ga0070692_100659653 185
80 3300005445 Ga0070708_100090519 Ga0070708_1000905193 185
81 3300005468 Ga0070707_100778494 Ga0070707_1007784941 185
82 3300005530 Ga0070679_100379517 Ga0070679_1003795171 185
83 3300005539 Ga0068853_100441450 Ga0068853_1004414501 185
84 3300007265 Ga0099794_10000301 Ga0099794_1000030114 185
85 3300009093 Ga0105240_10226476 Ga0105240_102264762 185
86 3300013306 Ga0163162_10075795 Ga0163162_100757953 185
87 3300015262 Ga0182007_10028101 Ga0182007_100281012 185
88 3300016635 Ga0183361_10030 Ga0183361_1003044 185
89 3300017792 Ga0163161_10139869 Ga0163161_101398693 185
90 3300021361 Ga0213872_10000741 Ga0213872_100007418 185
91 3300021361 Ga0213872_10124115 Ga0213872_101241153 185
92 3300025208 Ga0209436_100216 Ga0209436_10021614 185
93 3300025208 Ga0209436_100660 Ga0209436_1006604 185
94 3300025245 Ga0207425_1000001 Ga0207425_10000011058 185
95 3300025245 Ga0207425_1000039 Ga0207425_1000039176 185
96 3300025245 Ga0207425_1014450 Ga0207425_10144503 185
97 3300025258 Ga0209129_1000001 Ga0209129_1000001235 185
98 3300025258 Ga0209129_1001725 Ga0209129_10017251 185
99 3300025263 Ga0209565_1000017 Ga0209565_1000017181 185
100 3300025263 Ga0209565_1003504 Ga0209565_10035044 185
101 3300025263 Ga0209565_1007997 Ga0209565_10079972 185
102 3300025263 Ga0209565_1020513 Ga0209565_10205132 185
103 3300025263 Ga0209565_1046649 Ga0209565_10466491 185
104 3300025273 Ga0209673_1000007 Ga0209673_1000007248 185
105 3300025273 Ga0209673_1020929 Ga0209673_10209293 185
106 3300025284 Ga0209130_1001043 Ga0209130_100104318 185
107 3300025284 Ga0209130_1002563 Ga0209130_10025638 185
108 3300025284 Ga0209130_1003200 Ga0209130_10032007 185
109 3300025291 Ga0209675_1000009 Ga0209675_1000009270 185
110 3300025291 Ga0209675_1001665 Ga0209675_10016655 185
111 3300025291 Ga0209675_1011521 Ga0209675_10115212 185
112 3300025295 Ga0209564_1000036 Ga0209564_1000036248 185
113 3300025295 Ga0209564_1000055 Ga0209564_1000055205 185
114 3300025295 Ga0209564_1000109 Ga0209564_1000109189 185
115 3300025295 Ga0209564_1009956 Ga0209564_10099563 185
116 3300025295 Ga0209564_1020301 Ga0209564_10203011 185
117 3300025295 Ga0209564_1027653 Ga0209564_10276532 185
118 3300025297 Ga0209758_1000020 Ga0209758_1000020218 185
119 3300025298 Ga0209050_1000074 Ga0209050_1000074188 185
120 3300025298 Ga0209050_1000628 Ga0209050_10006284 185
121 3300025298 Ga0209050_1001807 Ga0209050_10018074 185
122 3300025298 Ga0209050_1046885 Ga0209050_10468851 185
123 3300025299 Ga0209256_1000028 Ga0209256_1000028191 185
124 3300025299 Ga0209256_1000167 Ga0209256_100016763 185
125 3300025299 Ga0209256_1002827 Ga0209256_10028275 185
126 3300025299 Ga0209256_1013341 Ga0209256_10133413 185
127 3300025299 Ga0209256_1052769 Ga0209256_10527691 185
128 3300025302 Ga0207426_1000037 Ga0207426_1000037315 185
129 3300025302 Ga0207426_1007950 Ga0207426_10079502 185
130 3300025302 Ga0207426_1025047 Ga0207426_10250472 185
131 3300025304 Ga0209257_1000003 Ga0209257_100000335 185
132 3300025304 Ga0209257_1001374 Ga0209257_10013744 185
133 3300025304 Ga0209257_1003578 Ga0209257_100357811 185
134 3300025904 Ga0207647_10002327 Ga0207647_100023271 185
135 3300025912 Ga0207707_10086826 Ga0207707_100868264 185
136 3300027671 Ga0209588_1000100 Ga0209588_100010014 185
137 3300031507 Ga0307509_10000035 Ga0307509_1000003582 185
138 3300031548 Ga0307408_100000126 Ga0307408_10000012672 185
139 3300031548 Ga0307408_100012724 Ga0307408_1000127243 185
140 3300031548 Ga0307408_100110652 Ga0307408_1001106521 185
141 3300031711 Ga0265314_10030039 Ga0265314_100300394 185
142 3300031730 Ga0307516_10068135 Ga0307516_100681353 185
143 3300037471 Ga0395905_0387552 Ga0395905_0387552_537_1133 185
144 3300039447 Ga0436361_0125181 Ga0436361_0125181_377_970 185
145 3300039447 Ga0436361_0562344 Ga0436361_0562344_1405_1998 185
146 3300039447 Ga0436361_0708311 Ga0436361_0708311_1705_2298 185
147 3300039447 Ga0436361_0745984 Ga0436361_0745984_6293_6883 185
148 3300041456 Ga0451795_0604237 Ga0451795_0604237_42_686 185
149 3300042134 Ga0450898_009031 Ga0450898_009031_59_685 185
150 3300046452 Ga0495617_000131 Ga0495617_000131_35834_36433 185
151 3300046455 Ga0495603_0009398 Ga0495603_0009398_4542_5132 185
152 3300046471 Ga0495650_0000708 Ga0495650_0000708_11509_12090 185
153 3300046472 Ga0495580_0169529 Ga0495580_0169529_197_787 185
154 3300046474 Ga0495605_0006454 Ga0495605_0006454_4542_5132 185
155 3300046501 Ga0495607_0096715 Ga0495607_0096715_115_759 185
156 3300046506 Ga0495583_0001179 Ga0495583_0001179_2957_3547 185
157 3300046507 Ga0495606_0000948 Ga0495606_0000948_34814_35488 185
158 3300046507 Ga0495606_0002923 Ga0495606_0002923_11366_11953 185
159 3300046507 Ga0495606_0003871 Ga0495606_0003871_11624_12205 185
160 3300046515 Ga0495620_0000719 Ga0495620_0000719_7424_8023 185
161 3300046515 Ga0495620_0005004 Ga0495620_0005004_271_921 185
162 3300046518 Ga0495631_0000631 Ga0495631_0000631_7639_8280 185
163 3300046524 Ga0495648_0008035 Ga0495648_0008035_5366_6007 185
164 3300046525 Ga0495663_0008010 Ga0495663_0008010_1244_1843 185
165 3300046528 Ga0495642_0057464 Ga0495642_0057464_983_1573 185
166 3300046531 Ga0495665_0046256 Ga0495665_0046256_30_620 185
167 3300046557 Ga0495622_0000011 Ga0495622_0000011_183230_183841 185
168 3300046557 Ga0495622_0015926 Ga0495622_0015926_1194_1784 185
169 3300046794 Ga0495589_0008169 Ga0495589_0008169_130_720 185
170 3300047320 Ga0495672_0030457 Ga0495672_0030457_2369_2959 185
171 3300047323 Ga0495683_0002903 Ga0495683_0002903_3206_3796 185
172 3300047443 Ga0495687_085057 Ga0495687_085057_567_1157 185
173 3300047469 Ga0495673_0000151 Ga0495673_0000151_33292_33933 185
174 3300047472 Ga0495686_0000019 Ga0495686_0000019_231858_232436 185
175 3300047472 Ga0495686_0003030 Ga0495686_0003030_10282_10929 185
176 3300047472 Ga0495686_0131938 Ga0495686_0131938_820_1464 185
177 3300048091 Ga0495626_0068868 Ga0495626_0068868_611_1201 185
178 3300048903 Ga0496100_0245125 Ga0496100_0245125_642_1232 185
179 3300048904 Ga0496101_0011542 Ga0496101_0011542_4527_5117 185
180 3300048904 Ga0496101_0519046 Ga0496101_0519046_203_793 185
181 3300048905 Ga0496102_0232857 Ga0496102_0232857_285_875 185
182 3300048905 Ga0496102_0343041 Ga0496102_0343041_70_660 185
183 3300048906 Ga0496103_0020521 Ga0496103_0020521_478_1068 185
184 3300048906 Ga0496103_0038243 Ga0496103_0038243_556_1146 185
185 3300048907 Ga0496104_0000938 Ga0496104_0000938_9466_10131 185
186 3300048907 Ga0496104_0117937 Ga0496104_0117937_1281_1943 185
187 3300048908 Ga0496105_0166143 Ga0496105_0166143_1203_1793 185
188 3300048909 Ga0496106_0003765 Ga0496106_0003765_7587_8240 185
189 3300048915 Ga0496112_0226493 Ga0496112_0226493_28_618 185
190 3300048915 Ga0496112_0830322 Ga0496112_0830322_175_765 185
191 3300048919 Ga0496116_0260441 Ga0496116_0260441_30_620 185
192 3300048919 Ga0496116_0374512 Ga0496116_0374512_51_629 185
193 3300048920 Ga0496117_0042344 Ga0496117_0042344_1074_1652 185
194 3300048920 Ga0496117_0061254 Ga0496117_0061254_966_1556 185
195 3300048920 Ga0496117_0096101 Ga0496117_0096101_1208_1831 185
196 3300048921 Ga0496118_0007378 Ga0496118_0007378_62_640 185
197 3300048921 Ga0496118_0007642 Ga0496118_0007642_9241_9819 185
198 3300048921 Ga0496118_0084891 Ga0496118_0084891_181_804 185
199 3300048921 Ga0496118_0129129 Ga0496118_0129129_764_1354 185
200 3300048922 Ga0496119_0221697 Ga0496119_0221697_350_940 185
201 3300048924 Ga0496121_0000102 Ga0496121_0000102_17361_18014 185
202 3300048924 Ga0496121_0000315 Ga0496121_0000315_95004_95582 185
203 3300048924 Ga0496121_0018470 Ga0496121_0018470_3183_3773 185
204 3300048924 Ga0496121_0029268 Ga0496121_0029268_1638_2300 185
205 3300048924 Ga0496121_0115041 Ga0496121_0115041_919_1509 185
206 3300048925 Ga0496122_0001093 Ga0496122_0001093_38195_38806 185
207 3300048925 Ga0496122_0027484 Ga0496122_0027484_939_1517 185
208 3300048925 Ga0496122_0060763 Ga0496122_0060763_2024_2623 185
209 3300048926 Ga0496123_0002085 Ga0496123_0002085_19792_20403 185
210 3300048926 Ga0496123_0026544 Ga0496123_0026544_1152_1730 185
211 3300048926 Ga0496123_0061808 Ga0496123_0061808_1006_1605 185
212 3300048926 Ga0496123_0191576 Ga0496123_0191576_52_630 185
213 3300048927 Ga0496124_0474058 Ga0496124_0474058_226_834 185
214 3300048927 Ga0496124_0517295 Ga0496124_0517295_64_654 185
215 3300048928 Ga0496125_0144342 Ga0496125_0144342_1041_1619 185
216 3300048929 Ga0496126_0000063 Ga0496126_0000063_50342_50953 185
217 3300048929 Ga0496126_0000679 Ga0496126_0000679_2367_2990 185
218 3300048929 Ga0496126_0068650 Ga0496126_0068650_90_668 185
219 3300049460 Ga0495682_0001387 Ga0495682_0001387_2493_3083 185
220 3300053090 Ga0500646_0007881 Ga0500646_0007881_706_1350 185
221 3300053094 Ga0500566_0007892 Ga0500566_0007892_4370_5017 185
222 3300053108 Ga0500562_037990 Ga0500562_037990_324_968 185
223 3300053124 Ga0500617_121397 Ga0500617_121397_94_738 185
224 3300053125 Ga0500618_000331 Ga0500618_000331_21220_21828 185
225 3300053150 Ga0500603_005854 Ga0500603_005854_740_1414 185
226 iso_pu_bacteria 2562617112 2563062035 185
227 iso_pu_bacteria 2711768613 2713478127 185

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00440

TetR_N

Bacterial regulatory proteins, tetR family

40

86

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
4l62-assembly1.cif.gz_C crystal structure of pseudomonas aeruginosa transcriptional regulator pa2196 bound to its operator dna 0.817 8 184
2fd5-assembly1.cif.gz_A-2 the crystal structure of a transcriptional regulator from pseudomonas aeruginosa pao1 0.8113 3 180
6zui-assembly1.cif.gz_A crystal structure of the cys-ser mutant of the cpyfp-based biosensor for hypochlorous acid 0.8087 11 87
3dpj-assembly2.cif.gz_H the crystal structure of a tetr transcription regulator from silicibacter pomeroyi dss 0.8017 9 184
2fd5-assembly1.cif.gz_A-2 the crystal structure of a transcriptional regulator from pseudomonas aeruginosa pao1 0.7992 3 180
ID Description Score Start End Superfamily
3mvpA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9917 9 51 1.10.10.60
2eh3A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9902 11 57 1.10.10.60
2g0eE01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.986 11 57 1.10.10.60
1jt6E01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9851 11 57 1.10.10.60
3br6E01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9851 11 57 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A0Q8QEA0-F1-model_v4 HTH tetR-type domain-containing protein 0.9984 1 185 GO:0003677
AF-A0A6L6QJ62-F1-model_v4 TetR family transcriptional regulator 0.9953 1 185 GO:0003677
AF-A0A6J5E8C4-F1-model_v4 HTH tetR-type domain-containing protein 0.98 1 180 GO:0003677
GO:0006355
AF-A0A7Z7E3P8-F1-model_v4 deleted 0.9652 5 180
AF-A0A529XIR9-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9643 1 160 GO:0003677
GO:0006355

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pLDDT pTM Quality
94.61 0.88 High
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Predicted Structure (AlphaFold2)

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